mRNA_P-wetherbeei_contig6604.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6604.1.1 vs. uniprot
Match: A0A2D4CBX1_PYTIN (ATP-dependent DNA helicase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CBX1_PYTIN) HSP 1 Score: 280 bits (716), Expect = 4.740e-83 Identity = 139/251 (55.38%), Postives = 177/251 (70.52%), Query Frame = 1
Query: 277 CISQWGHDFRPDYSKLGWCKKTFPDVPVLAVTATATGKVVGDVVRSLGMRNHKSVNQGIDRPYLYFEVREKPKSGMDQMTAVAEYVKSK--AGATGIVYCMTKTDTEQIALYLISQGVRADFYHAGQTTGQRQQVQTSWQEGEIDVVVATIAYGMGIDKSDVRYVLHFSIPKSIAGYYQEAGRAGRDGKPAECVLMYRREDISKLQNIIRISGKGGRA-TKERHGELLEEMRAYCEQTDQCRKVFLEVYFG 1020
C+SQWGHDFRPDYSKLG K FPDVP++A+TATA KV+ V RSL +RN K + +RP L FEVREKP + A+ + + ++ A GIVYCMTK + E +A YL +GVRADFYHAGQ+ G RQ VQ +WQ+G+I VV ATIAYGMGI+K+DVRYV+H+S+ KS+ GYYQEAGRAGRDG P++C+L Y DISK+++I+ + KG A + H E L +M YCE CR+ L YFG
Sbjct: 312 CVSQWGHDFRPDYSKLGLLKDEFPDVPLMALTATAPPKVIQGVQRSLKIRNAKIFSMSFNRPNLSFEVREKPLQEAKALEALHQVISTEFQESAVGIVYCMTKQECEDVANYLFDRGVRADFYHAGQSNGDRQLVQEAWQQGQISVVCATIAYGMGINKADVRYVIHYSVAKSMEGYYQEAGRAGRDGLPSKCILFYSSRDISKMRSILYMPQKGMTAKARAVHIEKLRDMAEYCEDETSCRRKLLVTYFG 562
BLAST of mRNA_P-wetherbeei_contig6604.1.1 vs. uniprot
Match: A0A425CKQ2_9STRA (ATP-dependent DNA helicase n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A425CKQ2_9STRA) HSP 1 Score: 270 bits (689), Expect = 1.020e-79 Identity = 135/252 (53.57%), Postives = 174/252 (69.05%), Query Frame = 1
Query: 277 CISQWGHDFRPDYSKLGWCKKTFPDVPVLAVTATATGKVVGDVVRSLGMRNHKSVNQGIDRPYLYFEVREKPK-SGMDQMTAVAEYVKS--KAGATGIVYCMTKTDTEQIALYLISQGVRADFYHAGQTTGQRQQVQTSWQEGEIDVVVATIAYGMGIDKSDVRYVLHFSIPKSIAGYYQEAGRAGRDGKPAECVLMYRREDISKLQNIIRISGKG-GRATKERHGELLEEMRAYCEQTDQCRKVFLEVYFG 1020
C+SQWGHDFRP+YS+LG KKTFPDVP++A+TATA KV+ D+ RSL + + +R L FEVREKP+ S M A+ +++ + A GIVYCMTK D+E +A YL +G+ ADFYHAGQ+ R VQ +WQ G++ +V ATIAYGMGI+K DVRYV+HFS+ KSI GYYQEAGRAGRDGKP+ C++ Y D+SKL++I+ + KG R T+ H E L M YCE CR+ L YFG
Sbjct: 269 CVSQWGHDFRPEYSQLGLLKKTFPDVPLMALTATAPPKVIKDIQRSLRISKGLVFSMSFNRQNLTFEVREKPRGSDKTAMEALYQFISTTYSQDAVGIVYCMTKQDSEDVANYLFDRGLSADFYHAGQSATDRHMVQEAWQNGQLSIVCATIAYGMGINKPDVRYVIHFSVAKSIEGYYQEAGRAGRDGKPSHCIMFYSPRDVSKLRSILFMPQKGMTRKTRAVHMEKLRTMAEYCEDDATCRRQLLISYFG 520
BLAST of mRNA_P-wetherbeei_contig6604.1.1 vs. uniprot
Match: G4Z2Z7_PHYSP (ATP-dependent DNA helicase n=2 Tax=Phytophthora TaxID=4783 RepID=G4Z2Z7_PHYSP) HSP 1 Score: 264 bits (675), Expect = 2.010e-79 Identity = 134/252 (53.17%), Postives = 173/252 (68.65%), Query Frame = 1
Query: 277 CISQWGHDFRPDYSKLGWCKKTFPDVPVLAVTATATGKVVGDVVRSLGMRNHKSVNQGIDRPYLYFEVREKPK-SGMDQMTAVAEYVKSK--AGATGIVYCMTKTDTEQIALYLISQGVRADFYHAGQTTGQRQQVQTSWQEGEIDVVVATIAYGMGIDKSDVRYVLHFSIPKSIAGYYQEAGRAGRDGKPAECVLMYRREDISKLQNIIRISGKG-GRATKERHGELLEEMRAYCEQTDQCRKVFLEVYFG 1020
C+SQWGHDFRP+YS+LG KKTFP+VP++A+TATA KV+ V RSL + N + +R L FEVR+KP S + M A+ E + A GIVYCMTK D+E +A YL +G+ ADFYHAGQ+ R VQ +WQ G++ +V ATIAYGMGI+K DVRYV+HFS+ KSI GYYQEAGRAGRDGKP++C++ Y DISK+++I+ + KG + T+ H E L M YCE CR+ L YFG
Sbjct: 123 CVSQWGHDFRPEYSQLGMLKKTFPNVPLMALTATAPPKVIQGVQRSLKISNGPVFSMSFNRQNLTFEVRDKPLGSDVKAMEALYELISKTYPRDAVGIVYCMTKQDSEDVANYLFDRGLSADFYHAGQSATDRHMVQEAWQNGQLSIVCATIAYGMGINKPDVRYVIHFSVAKSIEGYYQEAGRAGRDGKPSQCIIFYSARDISKMRSILFMPQKGMTKQTRAVHMEKLRAMAEYCEDDTTCRRQQLISYFG 374
BLAST of mRNA_P-wetherbeei_contig6604.1.1 vs. uniprot
Match: A0A0W8D3S3_PHYNI (ATP-dependent DNA helicase n=13 Tax=Phytophthora TaxID=4783 RepID=A0A0W8D3S3_PHYNI) HSP 1 Score: 266 bits (680), Expect = 1.530e-78 Identity = 132/252 (52.38%), Postives = 174/252 (69.05%), Query Frame = 1
Query: 277 CISQWGHDFRPDYSKLGWCKKTFPDVPVLAVTATATGKVVGDVVRSLGMRNHKSVNQGIDRPYLYFEVREKPKSGMDQ-MTAVAEYVKSKAG--ATGIVYCMTKTDTEQIALYLISQGVRADFYHAGQTTGQRQQVQTSWQEGEIDVVVATIAYGMGIDKSDVRYVLHFSIPKSIAGYYQEAGRAGRDGKPAECVLMYRREDISKLQNIIRISGKG-GRATKERHGELLEEMRAYCEQTDQCRKVFLEVYFG 1020
C+SQWGHDFRP+Y++LG KKTFP VP++A+TATA KV+ V +SL + N + +R L FEVR+KP+ G + M A+ +++ + A GIVYCMTK D E +A YL G+ ADFYHAGQ+ R VQ +WQ G++ +V ATIAYGMGI+K DVRYV+HFS+ KSI GYYQEAGRAGRDGKP++C+L Y D+SK++NI+ + KG + T+ H E L+ M YCE CR+ L YFG
Sbjct: 259 CVSQWGHDFRPEYNQLGILKKTFPTVPLMALTATAPPKVIDHVKKSLMISNGHVFSMSFNRQNLTFEVRDKPRGGDKKAMEALYQHISTTYAPDAVGIVYCMTKQDCEDVANYLFDHGLSADFYHAGQSATDRHMVQEAWQNGQLSIVCATIAYGMGINKPDVRYVIHFSVAKSIEGYYQEAGRAGRDGKPSQCILFYSPRDVSKMRNILSMPQKGMTKKTRAVHMEKLKSMAEYCEDDTTCRRQLLISYFG 510
BLAST of mRNA_P-wetherbeei_contig6604.1.1 vs. uniprot
Match: A0A485KUN2_9STRA (ATP-dependent DNA helicase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KUN2_9STRA) HSP 1 Score: 263 bits (672), Expect = 1.540e-78 Identity = 130/252 (51.59%), Postives = 170/252 (67.46%), Query Frame = 1
Query: 277 CISQWGHDFRPDYSKLGWCKKTFPDVPVLAVTATATGKVVGDVVRSLGMRNHKSVNQGIDRPYLYFEVREKPKSGMDQMTAVAEYVKSKAG--ATGIVYCMTKTDTEQIALYLISQGVRADFYHAGQTTGQRQQVQTSWQEGEIDVVVATIAYGMGIDKSDVRYVLHFSIPKSIAGYYQEAGRAGRDGKPAECVLMYRREDISKLQNIIRISGKGGRATKER--HGELLEEMRAYCEQTDQCRKVFLEVYFG 1020
C++QWGHDFRPDY KLG K+ FPDVP++A+TATA KVV V + L + +R L F+V EK + + Y+ SK GIVYCMTK +E +A YL +G++ADFYHAGQ++ R+ VQ +WQ+G++ VV ATIAYGMGIDK+DVRYV+H+S+ KSI GYYQEAGRAGRDG+P++C + Y R D+SK++ II + KG K R H E LE+M YCE T CR+ +L YFG
Sbjct: 164 CVTQWGHDFRPDYHKLGKLKELFPDVPLMALTATAPQKVVDSVKKILKTPRATIYSMSFNRGNLSFDVVEKEHEEAKSLAQLHSYIASKYANNVVGIVYCMTKQQSEDVANYLFDRGIQADFYHAGQSSTDREMVQEAWQDGQVKVVCATIAYGMGIDKADVRYVIHYSVAKSIEGYYQEAGRAGRDGQPSQCTIFYNRRDVSKIRGIINMPKKGN-TMKSRGVHMEKLEKMMEYCEDTSSCRRQYLVSYFG 414
BLAST of mRNA_P-wetherbeei_contig6604.1.1 vs. uniprot
Match: A0A6G0XAI7_9STRA (ATP-dependent DNA helicase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XAI7_9STRA) HSP 1 Score: 263 bits (671), Expect = 2.160e-78 Identity = 129/251 (51.39%), Postives = 167/251 (66.53%), Query Frame = 1
Query: 277 CISQWGHDFRPDYSKLGWCKKTFPDVPVLAVTATATGKVVGDVVRSLGMRNHKSVNQGIDRPYLYFEVREKPKSGMDQMTAVAEYVKSKAG--ATGIVYCMTKTDTEQIALYLISQGVRADFYHAGQTTGQRQQVQTSWQEGEIDVVVATIAYGMGIDKSDVRYVLHFSIPKSIAGYYQEAGRAGRDGKPAECVLMYRREDISKLQNIIRISGKGGRA-TKERHGELLEEMRAYCEQTDQCRKVFLEVYFG 1020
C++QWGHDFRPDY+KLG K+ FPDVPV+A+TATA KV+ V + L + + +R L F V EK + + Y+ S GIVYCMTK +E +A YL +G++ADFYHAGQ++ R+ VQ +WQ+G++ VV ATIAYGMGIDK DVRYVLHFS+ KSI GYYQEAGRAGRDG+P++C + Y R D+SK++ II + KG T+ H E LE M YCE CR+ +L YFG
Sbjct: 164 CVTQWGHDFRPDYNKLGRLKELFPDVPVMALTATAPQKVIDSVKKILKIPRATIFSMSFNRSNLSFSVIEKESEEPKALAQLYSYISSNYSNNVVGIVYCMTKQQSEDVANYLFDRGIQADFYHAGQSSTDREMVQEAWQDGQVKVVCATIAYGMGIDKPDVRYVLHFSVAKSIEGYYQEAGRAGRDGQPSQCTIFYNRRDVSKIRGIINMPRKGNTMKTRGVHMEKLERMMEYCEDAGSCRRQYLVSYFG 414
BLAST of mRNA_P-wetherbeei_contig6604.1.1 vs. uniprot
Match: A0A2D4CC22_PYTIN (DNA helicase n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CC22_PYTIN) HSP 1 Score: 280 bits (715), Expect = 3.130e-78 Identity = 139/251 (55.38%), Postives = 177/251 (70.52%), Query Frame = 1
Query: 277 CISQWGHDFRPDYSKLGWCKKTFPDVPVLAVTATATGKVVGDVVRSLGMRNHKSVNQGIDRPYLYFEVREKPKSGMDQMTAVAEYVKSK--AGATGIVYCMTKTDTEQIALYLISQGVRADFYHAGQTTGQRQQVQTSWQEGEIDVVVATIAYGMGIDKSDVRYVLHFSIPKSIAGYYQEAGRAGRDGKPAECVLMYRREDISKLQNIIRISGKGGRA-TKERHGELLEEMRAYCEQTDQCRKVFLEVYFG 1020
C+SQWGHDFRPDYSKLG K FPDVP++A+TATA KV+ V RSL +RN K + +RP L FEVREKP + A+ + + ++ A GIVYCMTK + E +A YL +GVRADFYHAGQ+ G RQ VQ +WQ+G+I VV ATIAYGMGI+K+DVRYV+H+S+ KS+ GYYQEAGRAGRDG P++C+L Y DISK+++I+ + KG A + H E L +M YCE CR+ L YFG
Sbjct: 2103 CVSQWGHDFRPDYSKLGLLKDEFPDVPLMALTATAPPKVIQGVQRSLKIRNAKIFSMSFNRPNLSFEVREKPLQEAKALEALHQVIXTEFQESAVGIVYCMTKQECEDVANYLFDRGVRADFYHAGQSNGDRQLVQEAWQQGQISVVCATIAYGMGINKADVRYVIHYSVAKSMEGYYQEAGRAGRDGLPSKCILFYSSRDISKMRSILYMPQKGMTAKARAVHIEKLRDMAEYCEDETSCRRKLLVTYFG 2353
BLAST of mRNA_P-wetherbeei_contig6604.1.1 vs. uniprot
Match: A0A3R7JQM2_9STRA (ATP-dependent DNA helicase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JQM2_9STRA) HSP 1 Score: 262 bits (670), Expect = 8.000e-78 Identity = 131/251 (52.19%), Postives = 171/251 (68.13%), Query Frame = 1
Query: 277 CISQWGHDFRPDYSKLGWCKKTFPDVPVLAVTATATGKVVGDVVRSLGMRNHKSVNQGIDRPYLYFEVREKPKSGMDQMTAVAEYVKSK--AGATGIVYCMTKTDTEQIALYLISQGVRADFYHAGQTTGQRQQVQTSWQEGEIDVVVATIAYGMGIDKSDVRYVLHFSIPKSIAGYYQEAGRAGRDGKPAECVLMYRREDISKLQNIIRISGKG-GRATKERHGELLEEMRAYCEQTDQCRKVFLEVYFG 1020
C+SQWGHDFRP+YS++G KKTFPDVPV+A+TATA KV+ V RSL + + +R L FEVR+KP+ M + + + + A GIVYCMTK ++E +A YL + + ADFYHAGQ+ R VQ +WQ G++ +V ATIAYGMGI+K DVRYV+HFS+ KSI GYYQEAGRAGRDGKP++C+L Y DISK++NI+ + KG + T+ H E L+ M YCE CR+ L YFG
Sbjct: 193 CVSQWGHDFRPEYSQMGILKKTFPDVPVMALTATAPPKVIKGVQRSLHITKGSVFSMSFNRQNLSFEVRDKPRGDKKAMEELYKLISTTFPPDAVGIVYCMTKQESEDVANYLFDRELSADFYHAGQSGTNRHMVQEAWQTGQLSIVCATIAYGMGINKPDVRYVIHFSVAKSIEGYYQEAGRAGRDGKPSQCILFYSPRDISKMRNILNMPTKGMTKKTRAVHMEKLKAMGEYCEDETTCRRQQLISYFG 443
BLAST of mRNA_P-wetherbeei_contig6604.1.1 vs. uniprot
Match: H3GQI3_PHYRM (ATP-dependent DNA helicase n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GQI3_PHYRM) HSP 1 Score: 263 bits (673), Expect = 1.370e-77 Identity = 132/252 (52.38%), Postives = 170/252 (67.46%), Query Frame = 1
Query: 277 CISQWGHDFRPDYSKLGWCKKTFPDVPVLAVTATATGKVVGDVVRSLGMRNHKSVNQGIDRPYLYFEVREKPK-SGMDQMTAVAEYVKSK--AGATGIVYCMTKTDTEQIALYLISQGVRADFYHAGQTTGQRQQVQTSWQEGEIDVVVATIAYGMGIDKSDVRYVLHFSIPKSIAGYYQEAGRAGRDGKPAECVLMYRREDISKLQNIIRISGKG-GRATKERHGELLEEMRAYCEQTDQCRKVFLEVYFG 1020
C+SQWGHDFRP+YS+LG KKTFP VPV+A+TATA KV+ V RSL + + +R L FEVR+KP S M A+ + + + A GIVYCMTK D E +A YL +G+ ADFYHAGQ+ R VQ +WQ G++ +V ATIAYGMGIDK DVRYV+HFS+ KSI GYYQEAGRAGRDGKP++C++ Y DIS++++I+R+ KG + + H E L + YCE CR+ L YFG
Sbjct: 252 CVSQWGHDFRPEYSQLGLLKKTFPKVPVMALTATAPPKVIEGVQRSLRISKGHVFSMSFNRTNLTFEVRDKPLGSNAKAMEALFQLISTTYPRNAVGIVYCMTKQDCEDVANYLFDRGLSADFYHAGQSATDRHMVQDAWQNGQLSIVCATIAYGMGIDKPDVRYVIHFSVAKSIEGYYQEAGRAGRDGKPSQCIIFYSPRDISRMRSILRMPQKGMNKQARASHMEKLRSVAEYCEDDTTCRRQLLISYFG 503
BLAST of mRNA_P-wetherbeei_contig6604.1.1 vs. uniprot
Match: A0A6A3SMB9_9STRA (ATP-dependent DNA helicase n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3SMB9_9STRA) HSP 1 Score: 264 bits (675), Expect = 1.480e-77 Identity = 134/252 (53.17%), Postives = 173/252 (68.65%), Query Frame = 1
Query: 277 CISQWGHDFRPDYSKLGWCKKTFPDVPVLAVTATATGKVVGDVVRSLGMRNHKSVNQGIDRPYLYFEVREKPK-SGMDQMTAVAEYVKSK--AGATGIVYCMTKTDTEQIALYLISQGVRADFYHAGQTTGQRQQVQTSWQEGEIDVVVATIAYGMGIDKSDVRYVLHFSIPKSIAGYYQEAGRAGRDGKPAECVLMYRREDISKLQNIIRISGKG-GRATKERHGELLEEMRAYCEQTDQCRKVFLEVYFG 1020
C+SQWGHDFRP+YS+LG KKT+PDVP++A+TATA KV+ V RSL + N + +R L FEVR+KP S + + A+ E + A GIVYCMTK D+E +A YL +G+ ADFYHAGQ+ R VQ +WQ G++ +V ATIAYGMGI+K DVRYV+HFS+ KSI GYYQEAGRAGRDGKP++CV+ Y DISK+++I+ + KG + T+ H E L M YCE CR+ L YFG
Sbjct: 282 CVSQWGHDFRPEYSQLGMLKKTYPDVPLMALTATAPPKVIQGVQRSLRISNGPVFSMSFNRQNLTFEVRDKPLGSDVKALEALYELISKTYPRDAVGIVYCMTKQDSEDVANYLFDRGLSADFYHAGQSATDRHMVQEAWQNGQLSIVCATIAYGMGINKPDVRYVIHFSVAKSIEGYYQEAGRAGRDGKPSQCVIFYSARDISKMRSILFMPQKGMTKQTRAVHMEKLRAMAEYCEDDTTCRRQQLISYFG 533 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6604.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6604.1.1 >prot_P-wetherbeei_contig6604.1.1 ID=prot_P-wetherbeei_contig6604.1.1|Name=mRNA_P-wetherbeei_contig6604.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=320bp MRNHKSVNQGIDRPYLYFEVREKPKSGMDQMTAVAEYVKSKAGATGIVYCback to top mRNA from alignment at P-wetherbeei_contig6604:2..3290+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6604.1.1 ID=mRNA_P-wetherbeei_contig6604.1.1|Name=mRNA_P-wetherbeei_contig6604.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3289bp|location=Sequence derived from alignment at P-wetherbeei_contig6604:2..3290+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6604:2..3290+ >mRNA_P-wetherbeei_contig6604.1.1 ID=mRNA_P-wetherbeei_contig6604.1.1|Name=mRNA_P-wetherbeei_contig6604.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=960bp|location=Sequence derived from alignment at P-wetherbeei_contig6604:2..3290+ (Phaeothamnion wetherbeei SAG_119_79)back to top |