mRNA_P-wetherbeei_contig6601.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6601.1.1
Unique NamemRNA_P-wetherbeei_contig6601.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6601.1.1 vs. uniprot
Match: D8LN40_ECTSI (60S ribosomal protein L7a n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN40_ECTSI)

HSP 1 Score: 316 bits (809), Expect = 1.630e-106
Identity = 163/220 (74.09%), Postives = 189/220 (85.91%), Query Frame = 1
Query:    1 QPKGRDLSRFVKWPRYIRIQRQRKILCQRLKVPPSINQFATTLDKNQATELFKLMAKYQPETKAAKADRLKQLAAAKAAGETAAPPKPTPVVKFGLKHVTTLVEQKKATMVCIASDVVPIELVVWLPALCRKMEVPYCIVKNKARLGTMVHQKNAAVVCFTEVSKEDKAKLDSLRENFRQQFNKGFVRRWGGGKMGLKTQRKLEKRQKLIEAELAKKAQF 660
            QPK  DLSRFVKWPRYIR+QRQRKIL QRLKVPPSINQF+  +DKNQATEL K++ KYQPE K AK  RLK++AAAK AG+  AP K   V+KFGLKHVTTL+E++KA++V IA DV PIELVVWLPALCRKM +PYCI+K KARLGT+VHQKNAAV+C T V+KED++KL +L+ NF  QFN+GFVR+WGGG MGLKTQRKLEKRQK IEAELAKKAQ+
Sbjct:   38 QPKV-DLSRFVKWPRYIRLQRQRKILVQRLKVPPSINQFSKAIDKNQATELLKVLMKYQPEDKKAKQQRLKEIAAAKEAGKEPAPSKAPKVIKFGLKHVTTLIEEQKASLVVIAHDVTPIELVVWLPALCRKMGIPYCIMKGKARLGTLVHQKNAAVICLTTVNKEDESKLSNLKSNFTAQFNEGFVRKWGGGVMGLKTQRKLEKRQKAIEAELAKKAQY 256          
BLAST of mRNA_P-wetherbeei_contig6601.1.1 vs. uniprot
Match: A0A6V1R9A7_HETAK (60S ribosomal protein L7a n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1R9A7_HETAK)

HSP 1 Score: 295 bits (755), Expect = 2.560e-98
Identity = 158/218 (72.48%), Postives = 182/218 (83.49%), Query Frame = 1
Query:    1 QPKGRDLSRFVKWPRYIRIQRQRKILCQRLKVPPSINQFATTLDKNQATELFKLMAKYQPETKAAKADRLKQLAAAKAA-GETAAPPKPTPVVKFGLKHVTTLVEQKKATMVCIASDVVPIELVVWLPALCRKMEVPYCIVKNKARLGTMVHQKNAAVVCFTEVSKEDKAKLDSLRENFRQQFNKGFVRRWGGGKMGLKTQRKLEKRQKLIEAELAKK 651
            +PK RDLSR+VKWPR +RIQRQRKIL QRLKVPP+I QF+  L+KNQATELFKL+ KYQPETK AK  RLK++AAA A  GE     KP P +K+GLKHVTTL+EQK+A +VCIA DV P+ELVVWLPALCRKM VP+C+VK+KARLGT+ H+KNAAVV  TEV+KEDKAKLD+L  NF  QFN   VR+WGGG MGLKTQRKLEKRQK +EAELAKK
Sbjct:   38 RPKKRDLSRYVKWPRNVRIQRQRKILLQRLKVPPAIQQFSQPLEKNQATELFKLLVKYQPETKKAKQQRLKEMAAAGATKGE-----KPGPTLKYGLKHVTTLIEQKEAKLVCIAHDVNPLELVVWLPALCRKMGVPFCVVKDKARLGTLCHKKNAAVVALTEVNKEDKAKLDTLGANFTAQFNDTPVRKWGGGIMGLKTQRKLEKRQKALEAELAKK 250          
BLAST of mRNA_P-wetherbeei_contig6601.1.1 vs. uniprot
Match: F0Y2N8_AURAN (60S ribosomal protein L7a (Fragment) n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2N8_AURAN)

HSP 1 Score: 295 bits (754), Expect = 3.510e-98
Identity = 157/215 (73.02%), Postives = 176/215 (81.86%), Query Frame = 1
Query:   13 RDLSRFVKWPRYIRIQRQRKILCQRLKVPPSINQFATTLDKNQATELFKLMAKYQPETKAAKADRLKQLAAAKAAGETAAPPKPTPVVKFGLKHVTTLVEQKKATMVCIASDVVPIELVVWLPALCRKMEVPYCIVKNKARLGTMVHQKNAAVVCFTEVSKEDKAKLDSLRENFRQQFNKGFV--RRWGGGKMGLKTQRKLEKRQKLIEAELAKK 651
            RDLSRFVKWPRY+R+QRQ+KIL QRLKVPP++NQFATTLDKNQA ELFKL+ KYQPE KAAKADR+K LA AKAAG  A   K   VVKFGLKHVT LVE KKA +VCIASDV PIELVVWLPALC+KM+VPYCIVKNK+RLGT+VHQK AAV C T V KED+  LD LR NF+  +N      R+WGGG MGLKTQ KL KR+K ++AELAKK
Sbjct:   40 RDLSRFVKWPRYVRLQRQKKILQQRLKVPPALNQFATTLDKNQAAELFKLLMKYQPEDKAAKADRVKALAEAKAAGGAAPEGKAPTVVKFGLKHVTYLVENKKAKLVCIASDVDPIELVVWLPALCKKMDVPYCIVKNKSRLGTVVHQKTAAVCCLTTVKKEDQHSLDQLRSNFKAMYNDNVAHARKWGGGIMGLKTQAKLAKREKALQAELAKK 254          
BLAST of mRNA_P-wetherbeei_contig6601.1.1 vs. uniprot
Match: W7TKH1_9STRA (60S ribosomal protein L7a n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKH1_9STRA)

HSP 1 Score: 281 bits (719), Expect = 7.560e-93
Identity = 152/221 (68.78%), Postives = 176/221 (79.64%), Query Frame = 1
Query:    1 QPKGRDLSRFVKWPRYIRIQRQRKILCQRLKVPPSINQFATTLDKNQATELFKLMAKYQPETKAAKADRLKQLAAAKAAG-ETAAPPKPTPVVKFGLKHVTTLVEQKKATMVCIASDVVPIELVVWLPALCRKMEVPYCIVKNKARLGTMVHQKNAAVVCFTEVSKEDKAKLDSLRENFRQQFNKGFVRRWGGGKMGLKTQRKLEKRQKLIEAELAKKAQF 660
            +PKGRDLSRFVKWPRY+RIQRQRKIL QRLKVPP+INQF+  LDKNQATELFKL+AKY+PE+K  K +RLKQLAAAKA+G ET AP K T V+K+GLKHVT L+E KK   V IA DV PIELVVW+PALCRK  +PY IVK KARLG +VH+KNAAVV   E  KEDKA  + +   F+ +FN    R WGGG MGLKTQ++LE RQ+ +EAELAKKA F
Sbjct:   36 RPKGRDLSRFVKWPRYVRIQRQRKILYQRLKVPPAINQFSKALDKNQATELFKLLAKYRPESKVEKRERLKQLAAAKASGGETPAPAKQT-VIKYGLKHVTELIEAKKVKFVAIAHDVNPIELVVWIPALCRKQGIPYAIVKGKARLGALVHKKNAAVVALEEARKEDKATFEKMCAEFKLEFNDKKERTWGGGIMGLKTQKRLEIRQRAVEAELAKKAAF 255          
BLAST of mRNA_P-wetherbeei_contig6601.1.1 vs. uniprot
Match: A0A7S0LF41_9EUKA (60S ribosomal protein L7a n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LF41_9EUKA)

HSP 1 Score: 280 bits (716), Expect = 2.470e-92
Identity = 147/217 (67.74%), Postives = 174/217 (80.18%), Query Frame = 1
Query:    7 KGRDLSRFVKWPRYIRIQRQRKILCQRLKVPPSINQFATTLDKNQATELFKLMAKYQPETKAAKADRLKQLAAAKAAGETAAPPKPTPVVKFGLKHVTTLVEQKKATMVCIASDVVPIELVVWLPALCRKMEVPYCIVKNKARLGTMVHQKNAAVVCFTEVSKEDKAKLDSLRENFRQQFNKGFVRRWGGGKMGLKTQRKLEKRQKLIEAELAKKAQ 657
            KGRDLSR+V+WPRY+RIQRQ+K+L QRLKVPPSINQF  TLDKNQA+ELFKL+ KYQPETKAAKA RL+ LA A AA E      P   +K+GLKHVTTL+EQKKA +V I+ DV PIELV+WLPALCRKM VP+CIVK K+RLGT+ H+K  +VV  T V+ ED++KL +L EN R QFN+   R+WGGG MGLKTQ KL KR + IEAELAKKA+
Sbjct:   40 KGRDLSRYVRWPRYVRIQRQKKVLLQRLKVPPSINQFRRTLDKNQASELFKLLVKYQPETKAAKATRLETLAKATAAKENTTSGPPPATLKYGLKHVTTLIEQKKAKLVIISHDVDPIELVLWLPALCRKMNVPFCIVKGKSRLGTLTHKKTCSVVALTAVNNEDESKLKTLAENCRVQFNENVERKWGGGIMGLKTQAKLTKRAQAIEAELAKKAE 256          
BLAST of mRNA_P-wetherbeei_contig6601.1.1 vs. uniprot
Match: A0A7S3HBR5_9STRA (60S ribosomal protein L7a n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HBR5_9STRA)

HSP 1 Score: 279 bits (714), Expect = 4.800e-92
Identity = 146/217 (67.28%), Postives = 173/217 (79.72%), Query Frame = 1
Query:    7 KGRDLSRFVKWPRYIRIQRQRKILCQRLKVPPSINQFATTLDKNQATELFKLMAKYQPETKAAKADRLKQLAAAKAAGETAAPPKPTPVVKFGLKHVTTLVEQKKATMVCIASDVVPIELVVWLPALCRKMEVPYCIVKNKARLGTMVHQKNAAVVCFTEVSKEDKAKLDSLRENFRQQFNKGFVRRWGGGKMGLKTQRKLEKRQKLIEAELAKKAQ 657
            KG+DLSR+V+WPRY+RIQRQ+KIL QRLKVPPSINQF  TLDKNQA+ELFKL+ KYQPETKAAK  RL+ LA A AA E+     P   +KFGLKHVTTL+EQKKA +V I  DV PIELV+WLPALCRKM VP+ IVK K+RLGT+ H+K  +VVC T V+KED++KL +L ENF+ QFN    R+WGGG MGLKTQ KL+KR K +E E AKKA+
Sbjct:   39 KGKDLSRYVRWPRYVRIQRQKKILLQRLKVPPSINQFQRTLDKNQASELFKLLVKYQPETKAAKTTRLEALAQATAAKESTPSGPPPATLKFGLKHVTTLIEQKKAKLVVIPHDVDPIELVLWLPALCRKMNVPFAIVKGKSRLGTLTHKKTCSVVCLTSVNKEDESKLKTLGENFKAQFNDNVERKWGGGIMGLKTQAKLDKRAKALEVEEAKKAE 255          
BLAST of mRNA_P-wetherbeei_contig6601.1.1 vs. uniprot
Match: A0A7S2WM83_9STRA (60S ribosomal protein L7a n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WM83_9STRA)

HSP 1 Score: 275 bits (702), Expect = 4.030e-90
Identity = 145/218 (66.51%), Postives = 176/218 (80.73%), Query Frame = 1
Query:    4 PKGRDLSRFVKWPRYIRIQRQRKILCQRLKVPPSINQFATTLDKNQATELFKLMAKYQPETKAAKADRLKQLAAAKAAGETAAPPKPTPVVKFGLKHVTTLVEQKKATMVCIASDVVPIELVVWLPALCRKMEVPYCIVKNKARLGTMVHQKNAAVVCFTEVSKEDKAKLDSLRENFRQQFN--KGFVRRWGGGKMGLKTQRKLEKRQKLIEAELAKK 651
            PKGRDL R+V+WPRY+RIQRQRKIL QRLKVPPSINQF+  LDK+QATELF L+AKY+PE+KA K +RLK+LA AK AG +    KP  VVK+GL HVTTL+E+KKA +V IASDVVP+ELVVW+PALCRKM++PYCIV NK RLG +VH+K AAV+  TEV+KE ++KL  L    R QFN  K  +R+WGGG MGL+TQ KLE+R+  +EAE AKK
Sbjct:   43 PKGRDLGRYVRWPRYVRIQRQRKILLQRLKVPPSINQFSNKLDKSQATELFGLLAKYRPESKAEKKERLKKLAEAKVAGGSGDSGKPPAVVKYGLHHVTTLIEEKKAKLVIIASDVVPLELVVWIPALCRKMDIPYCIVNNKGRLGAVVHKKRAAVLAITEVNKEHESKLAQLANVCRAQFNDNKDALRKWGGGVMGLRTQAKLERRRAALEAEEAKK 260          
BLAST of mRNA_P-wetherbeei_contig6601.1.1 vs. uniprot
Match: A0A0P1B814_PLAHL (60S ribosomal protein L7a n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1B814_PLAHL)

HSP 1 Score: 274 bits (701), Expect = 5.530e-90
Identity = 153/222 (68.92%), Postives = 178/222 (80.18%), Query Frame = 1
Query:    1 QPKGRDLSRFVKWPRYIRIQRQRKILCQRLKVPPSINQFATTLDKNQATELFKLMAKYQPETKAAKADRLKQLAAAKAAGETAAPPKPTPVVKFGLKHVTTLVEQKKATMVCIASDVVPIELVVWLPALCRKMEVPYCIVKNKARLGTMVHQKNAAVVCFTEVSKEDKAKLDSLRENFRQQFNKGFV--RRWGGGKMGLKTQRKLEKRQKLIEAELAKKAQF 660
            QPK RDLSRFV+WPRY+R+QRQRKIL QRLKVPPSINQF+ T+DKN AT+LFKL+ KYQPETKAAK  RL+ +AA K   E  APP    VVKFGL HVT+L+E KKA +V IA DV PIELVV+LPALCR+ ++PYCIVK KARLG +VHQKNAAVV  T V+KEDKAK DSL + FR +FN+     R+WGGG MGLKTQ+KLE R+K I AE AKKAQ+
Sbjct:   49 QPK-RDLSRFVRWPRYVRLQRQRKILYQRLKVPPSINQFSNTVDKNVATDLFKLLLKYQPETKAAKTLRLRNIAAGKQ--EATAPPA---VVKFGLNHVTSLIENKKAKLVVIAHDVNPIELVVFLPALCRQFDIPYCIVKGKARLGQLVHQKNAAVVALTHVNKEDKAKFDSLSQVFRAKFNEDSATRRKWGGGIMGLKTQKKLELREKAIAAEAAKKAQY 264          
BLAST of mRNA_P-wetherbeei_contig6601.1.1 vs. uniprot
Match: A0A3R7JAR0_9STRA (60S ribosomal protein L7a n=8 Tax=Peronosporaceae TaxID=4777 RepID=A0A3R7JAR0_9STRA)

HSP 1 Score: 274 bits (700), Expect = 8.100e-90
Identity = 152/222 (68.47%), Postives = 178/222 (80.18%), Query Frame = 1
Query:    1 QPKGRDLSRFVKWPRYIRIQRQRKILCQRLKVPPSINQFATTLDKNQATELFKLMAKYQPETKAAKADRLKQLAAAKAAGETAAPPKPTPVVKFGLKHVTTLVEQKKATMVCIASDVVPIELVVWLPALCRKMEVPYCIVKNKARLGTMVHQKNAAVVCFTEVSKEDKAKLDSLRENFRQQFNKGFV--RRWGGGKMGLKTQRKLEKRQKLIEAELAKKAQF 660
            QPK RDLSRFV+WPRY+R+QRQRKIL QRLKVPPS+NQF+ TLDKN AT+LFKL+ KYQPETKAAK  RL+ +AA K   E +APP    VVKFGL HVT+LVE KKA +V IA DV PIELVV+LPALCR+ ++PYCIVK K+RLG +VHQKNAAVV  T V+KEDKAK DSL E F  +FN+     R+WGGG MGLKTQ+KLE R+K + AE AKKAQ+
Sbjct:   50 QPK-RDLSRFVRWPRYVRLQRQRKILYQRLKVPPSVNQFSNTLDKNVATDLFKLLLKYQPETKAAKTLRLRNIAAGKE--EASAPPA---VVKFGLNHVTSLVENKKAKLVVIAHDVDPIELVVFLPALCRQFDIPYCIVKGKSRLGQLVHQKNAAVVALTHVNKEDKAKFDSLSEAFHAKFNEDSTIRRKWGGGIMGLKTQKKLELREKAVAAEAAKKAQY 265          
BLAST of mRNA_P-wetherbeei_contig6601.1.1 vs. uniprot
Match: T0QDT5_SAPDV (60S ribosomal protein L7a n=3 Tax=Saprolegniaceae TaxID=4764 RepID=T0QDT5_SAPDV)

HSP 1 Score: 273 bits (697), Expect = 2.390e-89
Identity = 149/222 (67.12%), Postives = 176/222 (79.28%), Query Frame = 1
Query:    1 QPKGRDLSRFVKWPRYIRIQRQRKILCQRLKVPPSINQFATTLDKNQATELFKLMAKYQPETKAAKADRLKQLAAAKAAGETAAPPKPTPVVKFGLKHVTTLVEQKKATMVCIASDVVPIELVVWLPALCRKMEVPYCIVKNKARLGTMVHQKNAAVVCFTEVSKEDKAKLDSLRENFRQQFNKGFV--RRWGGGKMGLKTQRKLEKRQKLIEAELAKKAQF 660
            QPK RDLSRFV+WP+ +R+QRQ KIL  RLKVPPSINQF  TLDKN AT+L+KL+ KYQPE+KAAK  RL+ +AA K   + +APP    V+K+GL HVT+L+E KKA MVCIA DV PIELVV+LPALCRKM++PYCIVK KARLG +VH+KNAAVV  T+V+KEDKAK DSL   FR QFN      R+WGGG MGLKTQ+KLE R K + AELAKKAQ+
Sbjct:   51 QPK-RDLSRFVRWPKNVRLQRQHKILTTRLKVPPSINQFTNTLDKNAATDLYKLLLKYQPESKAAKTQRLRDIAAGKE--QVSAPPA---VIKYGLNHVTSLIENKKAKMVCIAHDVTPIELVVFLPALCRKMDIPYCIVKGKARLGQLVHKKNAAVVALTQVNKEDKAKFDSLNTAFRAQFNDESTHRRKWGGGIMGLKTQKKLELRAKAVAAELAKKAQY 266          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6601.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LN40_ECTSI1.630e-10674.0960S ribosomal protein L7a n=2 Tax=Ectocarpus TaxID... [more]
A0A6V1R9A7_HETAK2.560e-9872.4860S ribosomal protein L7a n=2 Tax=Heterosigma akas... [more]
F0Y2N8_AURAN3.510e-9873.0260S ribosomal protein L7a (Fragment) n=1 Tax=Aureo... [more]
W7TKH1_9STRA7.560e-9368.7860S ribosomal protein L7a n=2 Tax=Monodopsidaceae ... [more]
A0A7S0LF41_9EUKA2.470e-9267.7460S ribosomal protein L7a n=1 Tax=Coccolithus braa... [more]
A0A7S3HBR5_9STRA4.800e-9267.2860S ribosomal protein L7a n=1 Tax=Spumella elongat... [more]
A0A7S2WM83_9STRA4.030e-9066.5160S ribosomal protein L7a n=1 Tax=labyrinthulid qu... [more]
A0A0P1B814_PLAHL5.530e-9068.9260S ribosomal protein L7a n=2 Tax=Peronosporaceae ... [more]
A0A3R7JAR0_9STRA8.100e-9068.4760S ribosomal protein L7a n=8 Tax=Peronosporaceae ... [more]
T0QDT5_SAPDV2.390e-8967.1260S ribosomal protein L7a n=3 Tax=Saprolegniaceae ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6601contigP-wetherbeei_contig6601:1273..3373 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LN40
Preferred nameDOCK4
PFAMsDHR-2,DOCK-C2,DOCK_N,Ribosomal_L7Ae
Model size663
Max annot lvl2759|Eukaryota
KEGG rclassRC00020,RC00041
KEGG koko:K01054,ko:K02936,ko:K08272,ko:K11649,ko:K17697
KEGG ReactionR01351
KEGG Pathwayko00561,ko01100,ko03010,ko04015,ko04150,ko04152,ko04714,ko04723,ko04923,ko05225,map00561,map01100,map03010,map04015,map04150,map04152,map04714,map04723,map04923,map05225
KEGG ModuleM00098,M00177,M00179
Hectar predicted targeting categoryother localisation
GOsGO:0000470,GO:0000491,GO:0000492,GO:0002181,GO:0003008,GO:0003013,GO:0003018,GO:0003056,GO:0003674,GO:0003676,GO:0003723,GO:0003735,GO:0005096,GO:0005102,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005732,GO:0005737,GO:0005773,GO:0005774,GO:0005794,GO:0005829,GO:0005840,GO:0005844,GO:0005886,GO:0005911,GO:0006139,GO:0006364,GO:0006396,GO:0006412,GO:0006518,GO:0006725,GO:0006807,GO:0006928,GO:0006935,GO:0006937,GO:0006940,GO:0008015,GO:0008047,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009506,GO:0009507,GO:0009536,GO:0009605,GO:0009987,GO:0010467,GO:0012505,GO:0014910,GO:0014911,GO:0015934,GO:0016020,GO:0016043,GO:0016070,GO:0016072,GO:0016477,GO:0017016,GO:0017048,GO:0019229,GO:0019538,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030054,GO:0030165,GO:0030234,GO:0030334,GO:0030335,GO:0030515,GO:0030695,GO:0030971,GO:0031090,GO:0031267,GO:0031974,GO:0031981,GO:0032420,GO:0032421,GO:0032501,GO:0032879,GO:0032991,GO:0034470,GO:0034512,GO:0034622,GO:0034641,GO:0034645,GO:0034660,GO:0035150,GO:0035296,GO:0040011,GO:0040012,GO:0040017,GO:0042221,GO:0042254,GO:0042273,GO:0042330,GO:0042788,GO:0042995,GO:0043005,GO:0043043,GO:0043085,GO:0043087,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043547,GO:0043603,GO:0043604,GO:0043933,GO:0044057,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044391,GO:0044422,GO:0044424,GO:0044428,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0045906,GO:0045932,GO:0045986,GO:0046483,GO:0048365,GO:0048518,GO:0048519,GO:0048522,GO:0048870,GO:0050789,GO:0050790,GO:0050794,GO:0050880,GO:0050896,GO:0051020,GO:0051179,GO:0051239,GO:0051241,GO:0051270,GO:0051272,GO:0051336,GO:0051345,GO:0051674,GO:0051716,GO:0055044,GO:0060326,GO:0060589,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070887,GO:0071704,GO:0071826,GO:0071840,GO:0071944,GO:0090066,GO:0090257,GO:0090304,GO:0097159,GO:0097458,GO:0097746,GO:0097755,GO:0098588,GO:0098772,GO:0098805,GO:0098858,GO:0098862,GO:0120025,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1903522,GO:1903523,GO:1904694,GO:1904752,GO:1904754,GO:1990782,GO:1990904,GO:2000145,GO:2000147
Exons4
Evalue2.67e-107
EggNOG OGsCOG1358@1|root,KOG3166@2759|Eukaryota
Ec32 ortholog descriptionRibosomal protein L7Ae/L8/Nhp2 family
Ec32 orthologEc-05_003390.1
EC3.1.1.23
Descriptionmaturation of LSU-rRNA
Cds size663
COG categoryJ
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko01002,ko03009,ko03011,ko03021,ko03036,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186924.8600187-CDS-P-wetherbeei_contig6601:1272..15331683186924.8600187-CDS-P-wetherbeei_contig6601:1272..1533Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6601 1273..1533 -
1683186924.8738263-CDS-P-wetherbeei_contig6601:2036..22401683186924.8738263-CDS-P-wetherbeei_contig6601:2036..2240Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6601 2037..2240 -
1683186924.8840468-CDS-P-wetherbeei_contig6601:2891..30171683186924.8840468-CDS-P-wetherbeei_contig6601:2891..3017Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6601 2892..3017 -
1683186924.8974183-CDS-P-wetherbeei_contig6601:3301..33731683186924.8974183-CDS-P-wetherbeei_contig6601:3301..3373Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6601 3302..3373 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6601.1.1prot_P-wetherbeei_contig6601.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6601 1273..3373 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6601.1.1

>prot_P-wetherbeei_contig6601.1.1 ID=prot_P-wetherbeei_contig6601.1.1|Name=mRNA_P-wetherbeei_contig6601.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=221bp
QPKGRDLSRFVKWPRYIRIQRQRKILCQRLKVPPSINQFATTLDKNQATE
LFKLMAKYQPETKAAKADRLKQLAAAKAAGETAAPPKPTPVVKFGLKHVT
TLVEQKKATMVCIASDVVPIELVVWLPALCRKMEVPYCIVKNKARLGTMV
HQKNAAVVCFTEVSKEDKAKLDSLRENFRQQFNKGFVRRWGGGKMGLKTQ
RKLEKRQKLIEAELAKKAQF*
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mRNA from alignment at P-wetherbeei_contig6601:1273..3373-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6601.1.1 ID=mRNA_P-wetherbeei_contig6601.1.1|Name=mRNA_P-wetherbeei_contig6601.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2101bp|location=Sequence derived from alignment at P-wetherbeei_contig6601:1273..3373- (Phaeothamnion wetherbeei SAG_119_79)
CAGCCCAAGGGACGGGACCTCTCGCGCTTCGTGAAGTGGCCGCGGTACAT CCGGATCCAGCGCCAGCGCAAGGTCAGTCAGTTGCACCTTTCACCGGGGT AAACAAAGCCAACCGAATCTGCTCGAGCGCCGCTTCTTCTGAGAGGAAAG GGCGCGGCGGTTCTGGATGATCAATGCCTTTTTAAAACCGATCGCCGCAT CTTTCCTGGATGGAGGACAACCAAGTTGGCTCCGTGCAGGGCGGAGTCGA TGCTTCTTTCCTCTGGCGCGTCGGTTTTTTCCCCCTGAAACTGCCGGATC GCTTTCCCGTGTTCTTCGGTCTTATTGTTTCTTGCCGCTGTGTCTCTCTG TTGCAGATCTTGTGCCAGCGGCTGAAGGTGCCCCCGAGCATCAACCAGTT CGCGACGACACTGGACAAGAACCAGGCCACCGAGCTCTTCAAGCTCATGG CAAAGTACCAGCCCGAGACCAAGGCGGCGAAGGTACGTTTCTTAACCCAG TTTAATCCAGTCCTCGATTGCTACTTCCGTCGTGCCTCTCTTTTCCCCTC ATGTCGGCTACTAGTACACGTCTTTTCCCGACAGTTCCTCGCTTTGTAGA GTCTTCGACGGGGCTGTGCGCGCTTGGCGGATGAAGCTGTACGCGAGGGA ACGCTGGCGGAGCTGCGAATCGGAGGGAGCCGGCGAGGCGGCAGCTGAAG AGCAGCTTTTGGCTGGCTGCGATCGCGGAGTGAAATCGGAGTGCGAAAGC GGCGGGGCAGCGCAGCACGGATTGGCGGAGCGTGAAAGCTGCGGAATGGC GGACCGACGGGGCGGCGGGGATGCGGAGAGAAGCAGTTCCACCGCAGCGG AGCATGTACGCGGCGGCGTGGAGGGGTGGGCGGGCCCGGAGCGGCGACTC GCTGAAGCTATGGAACTTCACTGCACCAGCGACGGCGCAGGACCAGAGCG GCGTCCTGAAGGGAAAAGAAAGCCTCGGGCTTTGTTTCGGGATATTCTGA CCTTCCCTTCCTTGCCGAGCGATCAATTGTCCAAGGTCATCTAGATGCTT ATCCGTTCGCTCGGAACTTCTTTCGCTTGTTCCCCCGCTTGTTTCTCGCT TTTGGCTGGCGGCCGTTGCGTAACTGTTGACAGGCGGACCGGCTGAAGCA GCTGGCGGCGGCCAAGGCGGCTGGGGAGACAGCGGCGCCGCCGAAGCCGA CGCCGGTGGTCAAGTTCGGGCTGAAGCACGTGACGACGCTGGTGGAGCAG AAGAAGGCGACGATGGTGTGCATCGCCAGCGACGTCGTGCCGATCGAGCT TGTCGTCTGGCTGCCGGCATTGTGCCGCAAAATGGAGGTGAGGAAGGGTT TTCTTACGTTGCTTACTTCTTTTTCTGTAACGGTTGACTACGATTGGTGT TATTCTTTTTGTGTGTGGGGTGCTGCTTGGCTTTCCGGTTTTTATAGATG GGGCTGGGGAGACGGTGGGCGCAGCGGCGTTACCTTTGGGTTTCGCAAGA TGTAGATAGAGCTACCCTCGTCTTGGGTAAACCTTTTCCAAGATGGAGTT TGTAACGGGAGAAGGTGTTGCGGGACTTGCGGCTTCTGACAGGGAGGCCG GAAGCATTGTAGGCTTGACAGCATGTCTTCGGCAGCGGAGAAGCTTGCGT CCTTCTTTTATTTACTTTTTAATGAGCTGTTTGTGGCTGGCATTCTGGGA AGCTGCCGTTTTTTCTGTGAATGGGGATTGAGGGCACGGAATGGGTATGA GGATTGAGGGCACGACGGCCGTCTTCGGCTACGGTGACAGTGGCATTGTT GACGTTCGGGCCTTTCTCTCTCCCGTCAAAACGGCGGCAGGTGCCGTACT GCATCGTCAAGAACAAGGCGCGGCTGGGCACGATGGTACACCAGAAGAAC GCGGCGGTGGTGTGCTTCACGGAGGTGTCCAAGGAGGACAAGGCCAAGCT GGACTCGCTGCGGGAGAACTTCCGGCAGCAATTCAACAAGGGCTTTGTCC GACGCTGGGGGGGCGGCAAGATGGGGCTGAAGACGCAGCGCAAACTGGAG AAACGCCAGAAGCTCATCGAGGCCGAGCTCGCCAAGAAGGCGCAGTTCTA A
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6601:1273..3373-

>mRNA_P-wetherbeei_contig6601.1.1 ID=mRNA_P-wetherbeei_contig6601.1.1|Name=mRNA_P-wetherbeei_contig6601.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=663bp|location=Sequence derived from alignment at P-wetherbeei_contig6601:1273..3373- (Phaeothamnion wetherbeei SAG_119_79)
CAGCCCAAGGGACGGGACCTCTCGCGCTTCGTGAAGTGGCCGCGGTACAT
CCGGATCCAGCGCCAGCGCAAGATCTTGTGCCAGCGGCTGAAGGTGCCCC
CGAGCATCAACCAGTTCGCGACGACACTGGACAAGAACCAGGCCACCGAG
CTCTTCAAGCTCATGGCAAAGTACCAGCCCGAGACCAAGGCGGCGAAGGC
GGACCGGCTGAAGCAGCTGGCGGCGGCCAAGGCGGCTGGGGAGACAGCGG
CGCCGCCGAAGCCGACGCCGGTGGTCAAGTTCGGGCTGAAGCACGTGACG
ACGCTGGTGGAGCAGAAGAAGGCGACGATGGTGTGCATCGCCAGCGACGT
CGTGCCGATCGAGCTTGTCGTCTGGCTGCCGGCATTGTGCCGCAAAATGG
AGGTGCCGTACTGCATCGTCAAGAACAAGGCGCGGCTGGGCACGATGGTA
CACCAGAAGAACGCGGCGGTGGTGTGCTTCACGGAGGTGTCCAAGGAGGA
CAAGGCCAAGCTGGACTCGCTGCGGGAGAACTTCCGGCAGCAATTCAACA
AGGGCTTTGTCCGACGCTGGGGGGGCGGCAAGATGGGGCTGAAGACGCAG
CGCAAACTGGAGAAACGCCAGAAGCTCATCGAGGCCGAGCTCGCCAAGAA
GGCGCAGTTCTAA
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