prot_P-wetherbeei_contig66.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig66.2.1
Unique Nameprot_P-wetherbeei_contig66.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length899
Homology
BLAST of mRNA_P-wetherbeei_contig66.2.1 vs. uniprot
Match: A0A6H5JZQ9_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ9_9PHAE)

HSP 1 Score: 115 bits (287), Expect = 1.500e-22
Identity = 115/399 (28.82%), Postives = 181/399 (45.36%), Query Frame = 0
Query:  386 RREPITSEWLCAQAVALKRECHRGDDRG-DFKATAQWRRSFCERYNVF-RERGGAEDDGVQPASSVAELQAYHVRFRRLLQEPPQMLPGLRRATT------------QQPDPVYGRFSLSTRFAVDQVPLALNMDGPDVVPRGDSATMRNARPAGMKGGAGLDGAFK--ATLQLCFRAVGPHP---RPALIFHGNLEGPSQLEREAYHSGVDVFWRPDGWPDDAFWGAWLDTTFGNFVVSEEGLADAEK-LLVADGAEGAGAHSWDAVKTGAERLRTLLWLCPG-CAQWVHPARDGLVDAVRRLITHERERWFANPSNQQHWAPPPIGVPGGMTESQKRALATQWVGYAVPRLFGSFDDIRGAWERTGHCMTADGTGDELIRPPGVLSPYFFGEGAAAN 763
            R E   + W+   A  L  E +  D R  +F A+ +W R F +R+++  R R   ++  V+    + +++++H R R+LLQEPP     +RRA                  P YGRFSL+TRF VDQV LA  ++G D       +T        ++ G    G  K   T+  C  A        R A+IF GN +  S +E+ AY  GVDV ++ + W DD    AW   +F   +  EEG+   E+ +L AD         +  +  G     TLL L P      + P   G    ++  + +E + +  +  N   W    I +  G     +R L T+++  AV ++        G +E+TG  MTADG+ D+ + P GV+  Y F +G  ++
Sbjct:  362 RNEGAXTAWIRVNARKLVVEMYPDDPRAKNFSASDRWCRKFAKRHHLSKRRRTNMKNKSVE--DRLPQMKSFHRRLRQLLQEPP-----VRRAAAGCAAENNGAAIVPVESPHYGRFSLNTRFNVDQVGLAF-VNGLD-------STWDETGALRVQIGQPFPGLEKRQCTVNCCIGAGXAGDKLRRTAVIFRGNGK-VSAVEKAAYDPGVDVLFQENAWMDDPTCMAWAKNSFLRSIKGEEGVVPEEQSILFADNLHAQTTDEFKKLLHG--ECNTLLRLLPPKLTDELQPVDAGYGHLLKVEVGNELDEFLGHEENLCLWET--IKLSAGA----RRILFTRFIARAVAQMDARPGYRHGLFEKTGLAMTADGSLDDRVTPEGVVGAYNFMDGGTSS 736          
BLAST of mRNA_P-wetherbeei_contig66.2.1 vs. uniprot
Match: A0A6H5L2Y0_9PHAE (HTH CENPB-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Y0_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 1.650e-10
Identity = 82/279 (29.39%), Postives = 130/279 (46.59%), Query Frame = 0
Query:  382 ERRERREPITSEWLCAQAVALKRECHRGDDRG-DFKATAQWRRSFCERYNVF-RERGGAEDDGVQPASSVAELQAYHVRFRRLLQEPPQMLPGLRR-------ATTQQPDPVYGRFSLSTRFAVDQVPLALNMDGPDVVPRGDSAT-MRNARPAGMKGGAGLDGAFKATLQLCFRAVGPHPRPALIFHGNLEGPSQLEREAYHSGVDVFWRPDGWPDDAFWGAWLDTTFGNFVVSEEGLADAEK-LLVADGAEGAGAHSWDAVKTGAE-RLRTLLWLCP 648
            +RR+R   +++ W+    V    E +  D R  +F A+ +W   F +R+++  R R   ++  V+    + +++++  R R+LLQE                 A      P+YGRFSL+ RF VDQV LA+ +DG D    G  A  ++  +P       GL+   + T+  C  A     R A+IF G  +  S +E+ A+  GVDV ++ + W D     AW   +F   +  EEG+   E+ +L AD      A + D  K        TLLWL P
Sbjct:    9 QRRKRELRVSTAWIRKLVV----EMYPDDPRAKNFSASDRWCMKFAKRHHLSKRRRTNMKNKSVE--DRLPQMKSFRRRLRQLLQEXXXXXXXXXXXXXXXXAAIVPVESPLYGRFSLTARFNVDQVGLAI-VDGLDSKWDGTGALRVQIGQPF-----PGLE-KRQCTVNCCIGAGDNLMRTAVIFRGKGK-VSAVEKAAHDPGVDVLFQENAWMDGPTCMAWAKNSFLRSIKGEEGVVPGEQSILFADNLH---AQTTDEFKKFLHGECDTLLWLLP 270          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig66.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JZQ9_9PHAE1.500e-2228.82DDE-1 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5L2Y0_9PHAE1.650e-1029.39HTH CENPB-type domain-containing protein (Fragment... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006600HTH CenpB-type DNA-binding domainPFAMPF03221HTH_Tnp_Tc5coord: 369..433
e-value: 1.9E-6
score: 27.8
NoneNo IPR availableGENE3D1.10.10.60coord: 368..431
e-value: 1.1E-9
score: 40.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 225..285
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 88..131
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 868..882
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 846..898
IPR013087Zinc finger C2H2-typePROSITEPS00028ZINC_FINGER_C2H2_1coord: 141..163
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 368..431

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig66contigP-wetherbeei_contig66:7288..10261 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig66.2.1mRNA_P-wetherbeei_contig66.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig66 6848..10601 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig66.2.1 ID=prot_P-wetherbeei_contig66.2.1|Name=mRNA_P-wetherbeei_contig66.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=899bp
MAAIGEPIPGKYQKLHDVTDLLQSNYITDWQAQELSRICMAEDSLVTAHH
LGELRGMGSLAARNNDVVLSNEKWNSQRDALLSTIEGYRPAPPPQHGSAA
GKWAAQPAGGADGGGAQGGDDAPVAGVKRKAESDVVPTHQCMSCGQKFKS
TGGLGSHKLHCRHYQASMVMDATSADKFVALGEQDRAKNNGGGDFGNDSC
GTGGSAAVAGLPTAVMDSMGAAGGSPAVAGQPRAAPTVPGFGSGDEAGPD
GGTSPGTEDGGAGGGAGGGQPEKKRGRRNAASRHSWPLSVKVSVIDYLNE
RAKKGDHTGLQRAAAEKFGMAQGLVSKWWKDRDSITARYTELCRGGLGLG
QMARRKTYGGGGGAGGSQYPEMEAALARKCQERRERREPITSEWLCAQAV
ALKRECHRGDDRGDFKATAQWRRSFCERYNVFRERGGAEDDGVQPASSVA
ELQAYHVRFRRLLQEPPQMLPGLRRATTQQPDPVYGRFSLSTRFAVDQVP
LALNMDGPDVVPRGDSATMRNARPAGMKGGAGLDGAFKATLQLCFRAVGP
HPRPALIFHGNLEGPSQLEREAYHSGVDVFWRPDGWPDDAFWGAWLDTTF
GNFVVSEEGLADAEKLLVADGAEGAGAHSWDAVKTGAERLRTLLWLCPGC
AQWVHPARDGLVDAVRRLITHERERWFANPSNQQHWAPPPIGVPGGMTES
QKRALATQWVGYAVPRLFGSFDDIRGAWERTGHCMTADGTGDELIRPPGV
LSPYFFGEGAAANAAAASAAAAASAAASAVASAAALPGGVGGELGGAAMN
IGDAVAMCAGALPMALSSGTEDMVAAAAAAAMGVYVQSPATAPLQGMHMP
PAPASAPGSLAGPQMQVPSLPAPAPMPSAMPPAMPESAFGKAPGERGS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006600HTH_CenpB_DNA-bd_dom
IPR013087Znf_C2H2_type
IPR009057Homeobox-like_sf