mRNA_P-wetherbeei_contig6598.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6598.1.3
Unique NamemRNA_P-wetherbeei_contig6598.1.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6598.1.3 vs. uniprot
Match: D7FI10_ECTSI (DNA polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FI10_ECTSI)

HSP 1 Score: 371 bits (953), Expect = 1.640e-110
Identity = 192/284 (67.61%), Postives = 233/284 (82.04%), Query Frame = 1
Query:    1 LPPLPAEGQEQGVLPRVIKSLVLRRREVKKLLAAAAASDAVKREQLDIRQKALKLTANSMYGCLGFGGSRFCAKPIAALVTCKGRETLQRTVDIAQLQLGLDVIYGDTDSIMINTNSTDLAAVKTVGQSVRREVNKLYRSLELELDGVFKSMLLLKKKKYAALI-------------ELKGLDLVRRDWCPLSKDCGRFAVGRILSGEPRETVVDAIHDHVAALAAAVRAGTVPLEQFVITRGLNRAPHEYGNAAAEPHVQVALAMMKAGKPVSIGNHIPYVIC 813
            LP LPAEG + GVLPRVI++LV RR  VKK+L      D  ++++LDIRQKALKLTANSMYGCLGF  SRF AKPIAALVT +GRE+LQRTVD+++ QLGL+VIYGDTDS+MINT+STDL  VK +G  V+REVNKLY+SLEL+LDGVFKSMLLLKKKKYAAL+             E+KGLDLVRR+WC LSKD G+F + R+LSGE RETVV  IHDH+ ALAA++RAG V + ++VIT+GLN+APHEY +A ++PHVQVALAMMKAGK V++G+HIPYV+C
Sbjct: 1030 LPDLPAEGMDIGVLPRVIRTLVERRSVVKKMLKKE--KDPSRKQELDIRQKALKLTANSMYGCLGFSFSRFYAKPIAALVTAQGRESLQRTVDLSENQLGLEVIYGDTDSVMINTHSTDLKQVKDIGNQVKREVNKLYKSLELDLDGVFKSMLLLKKKKYAALVVVEHPDGSITYDKEMKGLDLVRREWCTLSKDTGKFVLDRVLSGEARETVVTGIHDHLEALAASMRAGEVEVPRYVITKGLNKAPHEYPDAKSQPHVQVALAMMKAGKSVNVGHHIPYVMC 1311          
BLAST of mRNA_P-wetherbeei_contig6598.1.3 vs. uniprot
Match: A0A482T3C7_9ARCH (DNA polymerase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482T3C7_9ARCH)

HSP 1 Score: 356 bits (913), Expect = 3.320e-107
Identity = 185/284 (65.14%), Postives = 221/284 (77.82%), Query Frame = 1
Query:    1 LPPLPAEGQEQGVLPRVIKSLVLRRREVKKLLAAAAASDAVKREQLDIRQKALKLTANSMYGCLGFGGSRFCAKPIAALVTCKGRETLQRTVDIAQLQLGLDVIYGDTDSIMINTNSTDLAAVKTVGQSVRREVNKLYRSLELELDGVFKSMLLLKKKKYAALI-------------ELKGLDLVRRDWCPLSKDCGRFAVGRILSGEPRETVVDAIHDHVAALAAAVRAGTVPLEQFVITRGLNRAPHEYGNAAAEPHVQVALAMMKAGKPVSIGNHIPYVIC 813
            LPPLP      GVLPRVIK+LV RRR+VK LL      D V+R+ LDIRQKALKLTANSMYGCLGF  SRF A+PIAALVT  GRE LQRTVD+A  Q+GLDVIYGDTDS+MINTN  DL  VK +G  V+REVNKLY+SLEL+LDG+F+SMLLLKKKKYAAL              ELKGLDLVRRDWCP+SKD G++ V +ILSG PRE +V AIHD+++ LAA +R   +P+EQ+VIT+GLN+ P +Y ++  +PH+QVAL M+KA KPV+IG+HIPYVIC
Sbjct:  821 LPPLPESSSTPGVLPRVIKTLVDRRRQVKNLLKNER--DPVQRQLLDIRQKALKLTANSMYGCLGFSFSRFYARPIAALVTAMGREALQRTVDLATHQMGLDVIYGDTDSVMINTNLVDLQQVKEIGNKVKREVNKLYKSLELDLDGIFRSMLLLKKKKYAALTIHELGNGQVEYEKELKGLDLVRRDWCPMSKDAGKYVVDQILSGRPREDIVMAIHDYLSDLAAKIRNHEIPMEQYVITKGLNKNPKDYPDSGGQPHLQVALQMLKANKPVNIGDHIPYVIC 1102          
BLAST of mRNA_P-wetherbeei_contig6598.1.3 vs. uniprot
Match: A0A7S2FD72_9STRA (DNA-directed DNA polymerase (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FD72_9STRA)

HSP 1 Score: 316 bits (809), Expect = 1.850e-99
Identity = 165/285 (57.89%), Postives = 214/285 (75.09%), Query Frame = 1
Query:    1 LPPLPAEGQEQGVLPRVIKSLVLRRREVKKLLAAAAASDAVKREQLDIRQKALKLTANSMYGCLGFGGSRFCAKPIAALVTCKGRETLQRTVDIAQLQLGLDVIYGDTDSIMINTNSTDLAAVKTVGQSVRREVNKLYRSLELELDGVFKSMLLLKKKKYAALI-------------ELKGLDLVRRDWCPLSKDCGRFAVGRILSGEPRETVVDAIHDHVAALAAAVRAGTVPLEQFVITRGLNRAPHEYGNAAAEPHVQVALAMMKAGKPVSIGNHIPYVICD 816
            LPP P    ++GV+P+VI++++ RR +VK+LL     +D  K++QLDIRQKALKLTANS+YGCLGF  SRF A+PIAALVT KGR+ LQRTVD+A+  +GL+VIYGDTDSIMI+T  TDL  V  +G+ V  E NKLYR+LELE+DGVFK+MLLLKKKKYAAL+             E+KGLDLVRRDWC LSK  G   + RILSGEP+E VV AIHD +  LA  +R G V +E+++IT+GLN++  +Y +A ++PH+QVA  M+  GK V+ G+HIP+VIC+
Sbjct:   78 LPPDPENIDDKGVVPKVIRTIINRRVQVKQLLKQE--TDVGKKQQLDIRQKALKLTANSLYGCLGFSSSRFHAQPIAALVTAKGRQILQRTVDLAENNMGLEVIYGDTDSIMIDTKCTDLKEVNEIGKKVVNECNKLYRTLELEMDGVFKTMLLLKKKKYAALVVNEAKDGTVTLTKEMKGLDLVRRDWCGLSKTTGEIILDRILSGEPKEVVVKAIHDCLETLAVRMRTGEVEVEEYIITKGLNKSIKDYPDAKSQPHLQVAKRMLTEGKMVNTGDHIPFVICN 360          
BLAST of mRNA_P-wetherbeei_contig6598.1.3 vs. uniprot
Match: A0A4D9CVK1_9STRA (DNA polymerase n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVK1_9STRA)

HSP 1 Score: 337 bits (865), Expect = 2.190e-98
Identity = 190/316 (60.13%), Postives = 223/316 (70.57%), Query Frame = 1
Query:    1 LPPLPAEGQEQGVLPRVIKSLVLRRREVKKLLAAAAASDAVKREQLDIRQKALKLTANSMYGCLGFGGSRFCAKPIAALVTCKGRETLQRTVDIAQLQLGLDVIYGDTDSIMINTN-----------------STDLAA--------------VKTVGQSVRREVNKLYRSLELELDGVFKSMLLLKKKKYAALI-------------ELKGLDLVRRDWCPLSKDCGRFAVGRILSGEPRETVVDAIHDHVAALAAAVRAGTVPLEQFVITRGLNRAPHEYGNAAAEPHVQVALAMMKAGKPVSIGNHIPYVICD 816
            LPPLP    +QG+LPRVIK+LV RR  VKKLL A    DA K+EQLDIRQKALKLTANSMYGCLGF  SRF A+PIAALVT  GRETLQRTVD+AQ QL LDVIYGDTDSIMINT+                 +  +AA              VK  G  V++ VNKLY+SLELELDG+FK MLLLKKKKYAAL              ELKGLDLVRRDWC LSK+ GRF + +ILSGE R+ VV  IH ++  LA  +RAG V + Q+ IT+GLN+APHEY +A ++PH+QVAL+MMKAGKPV++G+HI YVIC+
Sbjct: 1030 LPPLPDTALDQGILPRVIKTLVDRRSSVKKLLKAER--DAAKKEQLDIRQKALKLTANSMYGCLGFSHSRFFARPIAALVTAMGRETLQRTVDVAQNQLSLDVIYGDTDSIMINTSIASRDEFDSGTMGTSDENDSVAARKLRLEKDMERIREVKAKGNLVKQAVNKLYKSLELELDGIFKCMLLLKKKKYAALTVSETAEGTLTYAKELKGLDLVRRDWCVLSKETGRFVIDQILSGENRDAVVATIHSYLEELAKRMRAGEVDVRQYAITKGLNKAPHEYPDAKSQPHLQVALSMMKAGKPVNVGDHIEYVICE 1343          
BLAST of mRNA_P-wetherbeei_contig6598.1.3 vs. uniprot
Match: K0T5T4_THAOC (DNA polymerase n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0T5T4_THAOC)

HSP 1 Score: 328 bits (840), Expect = 1.970e-97
Identity = 180/301 (59.80%), Postives = 220/301 (73.09%), Query Frame = 1
Query:    1 LPPLPAEGQEQGVLPRVIKSLVLRRREVKKLLAAAAASDAVKREQLDIRQKALKLTANSMYGCLGFGGSRFCAKPIAALVTCKGRETLQRTVDIAQLQLGLDVIYGDTDSIMINTNSTDLAAVKTV---GQSVRREVNKLYRSLELELDGVFKSMLLLKKKKYAALI--------------ELKGLDLVRRDWCPLSKDCGRFAVGRILSGEPRETVVDAIHDHVAALAAAVRAGTVPLEQFVITRGLNRAPHEYGNAAAEPHVQVALAMMKAGKPVSIGNHIPYVICDWRCRQHRGASAA 852
            LP LP E  ++GVLPRVIKSLV RRR VKK + +    DA K+E+L+IRQ ALKLTANSMYGCLGF  SRF A+PIAALVT  GR+TLQRTVDI Q  +GLDVIYGDTDSIMINT  TDL    TV   G  V+REVN+LY++LELE+DG+F+SMLLLKKKKYAAL               ELKGLDLVRRDWC  SKD G++ + +ILSGE RE +V  IHDH+  +A  +R+G + L+++VIT+GLN+ P+EY +  + PHV VA  M+K  K VSIG+HIPYVI + +  +  G SAA
Sbjct:  427 LPSLPDESLDRGVLPRVIKSLVERRRNVKKFMKSE--KDADKKEELNIRQLALKLTANSMYGCLGFQNSRFYARPIAALVTAMGRQTLQRTVDITQTTIGLDVIYGDTDSIMINTRITDLEEYSTVLELGNKVKREVNRLYKTLELEIDGIFRSMLLLKKKKYAALTITTDGPGGKFKFDKELKGLDLVRRDWCLQSKDSGKYVIDQILSGEDRELIVSNIHDHLENVAKKMRSGELSLDKYVITKGLNKHPNEYPDGKSLPHVHVAKTMLKNHKAVSIGDHIPYVITESKDAEEGGNSAA 725          
BLAST of mRNA_P-wetherbeei_contig6598.1.3 vs. uniprot
Match: B7S420_PHATC (DNA polymerase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7S420_PHATC)

HSP 1 Score: 326 bits (836), Expect = 4.530e-96
Identity = 172/286 (60.14%), Postives = 219/286 (76.57%), Query Frame = 1
Query:    1 LPPLPAEGQEQGVLPRVIKSLVLRRREVKKLLAAAAASDAVKREQLDIRQKALKLTANSMYGCLGFGGSRFCAKPIAALVTCKGRETLQRTVDIAQLQLGLDVIYGDTDSIMINT---NSTDLAAVKTVGQSVRREVNKLYRSLELELDGVFKSMLLLKKKKYAALI-------------ELKGLDLVRRDWCPLSKDCGRFAVGRILSGEPRETVVDAIHDHVAALAAAVRAGTVPLEQFVITRGLNRAPHEYGNAAAEPHVQVALAMMKAGKPVSIGNHIPYVI 810
            LP LP    ++GVLPRVI+SLV RRR VKKLL +   ++AV++E+LDIRQKALKLTANSMYGCLGF  SRF A+PIAAL+T  GRE LQRTVDIAQ ++GLDVIYGDTDSIMINT   +  DL  VK +G+ V++EVN+LYR+LELE+DG+F+SMLLLKKKKYAA               ELKGLDLVRRDWC  SKD GR+   +ILSG+  + V++ IH H+  LA  +RAG +PLE++ IT+GL++ P+EY +  ++PHVQVA+ M+K  +PV+ G+HIPY+I
Sbjct:  558 LPDLPDTEADRGVLPRVIQSLVERRRTVKKLLKSE--TNAVRKEELDIRQKALKLTANSMYGCLGFSNSRFFAQPIAALITSMGREILQRTVDIAQQKVGLDVIYGDTDSIMINTRINDENDLPKVKELGERVKKEVNRLYRTLELEIDGIFRSMLLLKKKKYAAKTVEEGPNGEVKYGQELKGLDLVRRDWCIQSKDTGRYVTEQILSGQESDIVIENIHSHLEELATKMRAGNLPLEKYTITKGLSKHPNEYPDGKSQPHVQVAMVMLKNNRPVNTGDHIPYII 841          
BLAST of mRNA_P-wetherbeei_contig6598.1.3 vs. uniprot
Match: B8LEG9_THAPS (DNA polymerase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LEG9_THAPS)

HSP 1 Score: 326 bits (835), Expect = 5.810e-96
Identity = 176/288 (61.11%), Postives = 218/288 (75.69%), Query Frame = 1
Query:    1 LPPLPAEGQEQGVLPRVIKSLVLRRREVKKLLAAAAASDAVKREQLDIRQKALKLTANSMYGCLGFGGSRFCAKPIAALVTCKGRETLQRTVDIAQLQLGLDVIYGDTDSIMINTNSTDL---AAVKTVGQSVRREVNKLYRSLELELDGVFKSMLLLKKKKYAALI-------------ELKGLDLVRRDWCPLSKDCGRFAVGRILSGEPRETVVDAIHDHVAALAAAVRAGTVPLEQFVITRGLNRAPHEYGNAAAEPHVQVALAMMKAGKPVSIGNHIPYVICD 816
            LPPLP EG ++GVLPRVIK+LV RRR VKK L      +A K+E+L+IRQ+ALKLTANSMYGCLGF  SRF A+PIAALVT  GRETLQRTVD+AQ  +GL+VIYGDTDSIMINT  TD+     V  +G  V+REVNKLY +LELE+DGVF+SMLLLKKKKYAA+              E+KGLDLVRRDWC  SK+ G+F + +ILSGE +E VV  IHDH+  +A  +R+G +PL++++IT+GLN+ P+EY +A + PHV VA  M+K  K VSIG+HIPYVI +
Sbjct:  563 LPPLPDEGLKRGVLPRVIKTLVDRRRNVKKFLKTE--KNAEKKEELNIRQQALKLTANSMYGCLGFSHSRFYAQPIAALVTAMGRETLQRTVDLAQTSIGLEVIYGDTDSIMINTRITDVNEYPRVLELGNQVKREVNKLYNTLELEIDGVFRSMLLLKKKKYAAVTMAEGPGGKMIFDKEMKGLDLVRRDWCIQSKESGKFVLDQILSGEEKEVVVSNIHDHLEKVAQQMRSGELPLDKYIITKGLNKHPNEYPDAKSLPHVYVAKMMLKDHKAVSIGDHIPYVITE 848          
BLAST of mRNA_P-wetherbeei_contig6598.1.3 vs. uniprot
Match: A0A7S3P4R5_9STRA (DNA-directed DNA polymerase n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P4R5_9STRA)

HSP 1 Score: 302 bits (774), Expect = 2.420e-91
Identity = 164/287 (57.14%), Postives = 209/287 (72.82%), Query Frame = 1
Query:    7 PLPAEGQEQGVLPRVIKSLVLRRREVKKLLAAAAASDAVKREQLDIRQKALKLTANSMYGCLGFGGSRFCAKPIAALVTCKGRETLQRTVDIAQLQLGLDVIYGDTDSIMINTN---STDLAAVKTVGQSVRREVNKLYRSLELELDGVFKSMLLLKKKKYAALI--------------ELKGLDLVRRDWCPLSKDCGRFAVGRILSGEPRETVVDAIHDHVAALAAAVRAGTVPLEQFVITRGLNRAPHEYGNAAAEPHVQVALAMMKAGKPVSIGNHIPYVICD 816
            PLP   +E+GVLPRVI+SLV  RR VK +L +    +A ++++LDIRQKALKLTANSMYGCLGF  SRF A+PIAA VT  GRETLQ+TVDIAQ  +GLDVIYGDTDSIMINT      DL  V  +G+ V+REVNKLY++LELE+DG+F+SMLLLKKKKYAA                ELKGLDLVRRDWC  SKD GR+   +ILSG+  E V+  IH H+  LA  +R+G + L+++VIT+GL++ P +Y +  + PHVQVA  M++  +PV+ G+HIPY+I +
Sbjct:   42 PLPDATKERGVLPRVIQSLVEARRNVKNILKSE--QNATRKQELDIRQKALKLTANSMYGCLGFSHSRFFAQPIAAKVTQLGRETLQKTVDIAQNTVGLDVIYGDTDSIMINTRLNQDEDLKKVAGLGEQVKREVNKLYKTLELEIDGIFRSMLLLKKKKYAAKTVEEQKDGKVIKYGQELKGLDLVRRDWCVQSKDTGRYVTEQILSGQENEVVLHNIHSHLEELAKKMRSGELALDKYVITKGLSKHPKDYPDGKSLPHVQVAKQMLQNNRPVNTGDHIPYIITE 326          
BLAST of mRNA_P-wetherbeei_contig6598.1.3 vs. uniprot
Match: A0A7S1BTL0_9STRA (DNA polymerase (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BTL0_9STRA)

HSP 1 Score: 312 bits (799), Expect = 8.380e-91
Identity = 166/283 (58.66%), Postives = 211/283 (74.56%), Query Frame = 1
Query:    1 LPPLPAEGQEQGVLPRVIKSLVLRRREVKKLLAAAAASDAVKREQLDIRQKALKLTANSMYGCLGFGGSRFCAKPIAALVTCKGRETLQRTVDIAQLQLGLDVIYGDTDSIMINT---NSTDLAAVKTVGQSVRREVNKLYRSLELELDGVFKSMLLLKKKKYAALI---------ELKGLDLVRRDWCPLSKDCGRFAVGRILSGEPRETVVDAIHDHVAALAAAVRAGTVPLEQFVITRGLNRAPHEYGNAAAEPHVQVALAMMKAGKPVSIGNHIPYVIC 813
            L PLP      GVLPRVIK+LV RRR VK ++  A   D   + +LD+RQ+ALKLTANSMYGCLGF  SRF A+PIAALVT  GRE LQR V++AQ  +GL+VIYGDTDSIMINT   + ++L  V+ +G+ V+REVNKLYR+LELE+DG+++SMLLLKKKKYAAL+         ELKGLDLVRRDWC  SKD GRF + +ILSG+ RE V+D IH H+  LA  +R   + L+++VIT+ L++ P EY +A ++PHV VAL M+K  +P+S G+HIPYVIC
Sbjct:  584 LAPLPDGDAGVGVLPRVIKTLVERRRNVKNMMKKA--HDPATKNELDVRQQALKLTANSMYGCLGFSHSRFYAQPIAALVTAMGREVLQRAVEVAQDTVGLEVIYGDTDSIMINTRIRDQSELPKVRELGERVKREVNKLYRTLELEIDGIYRSMLLLKKKKYAALVMNDDGTESKELKGLDLVRRDWCIQSKDSGRFVIDQILSGQEREQVIDNIHRHLEELAKKMRENELALDKYVITKSLSKHPKEYPDAKSQPHVLVALDMLKNNRPISTGDHIPYVIC 864          
BLAST of mRNA_P-wetherbeei_contig6598.1.3 vs. uniprot
Match: A0A7S2V5I5_9STRA (DNA-directed DNA polymerase (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5I5_9STRA)

HSP 1 Score: 287 bits (734), Expect = 2.420e-90
Identity = 146/221 (66.06%), Postives = 176/221 (79.64%), Query Frame = 1
Query:  190 LGFGGSRFCAKPIAALVTCKGRETLQRTVDIAQLQLGLDVIYGDTDSIMINTNSTDLAAVKTVGQSVRREVNKLYRSLELELDGVFKSMLLLKKKKYAALI-------------ELKGLDLVRRDWCPLSKDCGRFAVGRILSGEPRETVVDAIHDHVAALAAAVRAGTVPLEQFVITRGLNRAPHEYGNAAAEPHVQVALAMMKAGKPVSIGNHIPYVIC 813
            +GF  SRF A+PIAALVT  GRETLQRT  +A+ QL LDVIYGDTDSIMINT STDLA VK +G  V+REVNKLY+ LELELDGVFKSMLLLKKKKYAAL+             ELKGLDLVRRDWC LSK+ G++ V +ILSGE R+TVVD IH+H++ LA+ +RAG + L Q+VIT+GLN+ P++Y +A  +PH+QVALAM+K GK V++GNHIPYVIC
Sbjct:    1 MGFSSSRFYARPIAALVTAMGRETLQRTATLAEQQLALDVIYGDTDSIMINTRSTDLAHVKDLGNQVKREVNKLYKLLELELDGVFKSMLLLKKKKYAALVVKEKADGTVTYEKELKGLDLVRRDWCVLSKETGQYVVNQILSGESRDTVVDNIHNHMSELASKMRAGELDLAQYVITKGLNKHPNDYPDAKGQPHLQVALAMIKEGKAVTVGNHIPYVIC 221          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6598.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FI10_ECTSI1.640e-11067.61DNA polymerase n=2 Tax=Ectocarpus TaxID=2879 RepID... [more]
A0A482T3C7_9ARCH3.320e-10765.14DNA polymerase n=1 Tax=archaeon TaxID=1906665 RepI... [more]
A0A7S2FD72_9STRA1.850e-9957.89DNA-directed DNA polymerase (Fragment) n=1 Tax=Dic... [more]
A0A4D9CVK1_9STRA2.190e-9860.13DNA polymerase n=1 Tax=Nannochloropsis salina CCMP... [more]
K0T5T4_THAOC1.970e-9759.80DNA polymerase n=1 Tax=Thalassiosira oceanica TaxI... [more]
B7S420_PHATC4.530e-9660.14DNA polymerase (Fragment) n=1 Tax=Phaeodactylum tr... [more]
B8LEG9_THAPS5.810e-9661.11DNA polymerase (Fragment) n=1 Tax=Thalassiosira ps... [more]
A0A7S3P4R5_9STRA2.420e-9157.14DNA-directed DNA polymerase n=1 Tax=Amphora coffei... [more]
A0A7S1BTL0_9STRA8.380e-9158.66DNA polymerase (Fragment) n=1 Tax=Corethron hystri... [more]
A0A7S2V5I5_9STRA2.420e-9066.06DNA-directed DNA polymerase (Fragment) n=1 Tax=Fib... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6598contigP-wetherbeei_contig6598:553..2848 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FI10
Preferred namePOLA1
PFAMsDNA_pol_B,DNA_pol_B_exo1,DNA_pol_alpha_N,zf-DNA_Pol
Model size1696
Max annot lvl2759|Eukaryota
KEGG rclassRC02795
KEGG koko:K02320
KEGG ReactionR00375,R00376,R00377,R00378
KEGG Pathwayko00230,ko00240,ko01100,ko03030,map00230,map00240,map01100,map03030
KEGG ModuleM00261
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000082,GO:0000083,GO:0000166,GO:0000228,GO:0000278,GO:0000428,GO:0000723,GO:0000726,GO:0000731,GO:0000734,GO:0000781,GO:0000784,GO:0000785,GO:0000790,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003688,GO:0003690,GO:0003697,GO:0003824,GO:0003887,GO:0003896,GO:0003899,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005657,GO:0005658,GO:0005694,GO:0005730,GO:0005737,GO:0005739,GO:0005829,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006269,GO:0006270,GO:0006271,GO:0006272,GO:0006273,GO:0006278,GO:0006279,GO:0006281,GO:0006302,GO:0006303,GO:0006310,GO:0006312,GO:0006355,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007049,GO:0007275,GO:0007530,GO:0007531,GO:0007533,GO:0007534,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009059,GO:0009653,GO:0009889,GO:0009965,GO:0009987,GO:0010016,GO:0010468,GO:0010556,GO:0012505,GO:0016043,GO:0016070,GO:0016363,GO:0016740,GO:0016772,GO:0016779,GO:0017076,GO:0018130,GO:0019103,GO:0019219,GO:0019222,GO:0019438,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0022402,GO:0022413,GO:0022414,GO:0022616,GO:0030154,GO:0030880,GO:0030894,GO:0031323,GO:0031326,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032200,GO:0032201,GO:0032501,GO:0032502,GO:0032505,GO:0032774,GO:0032991,GO:0032993,GO:0033260,GO:0033554,GO:0034061,GO:0034062,GO:0034399,GO:0034641,GO:0034645,GO:0034654,GO:0035822,GO:0035861,GO:0036094,GO:0042592,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043565,GO:0043596,GO:0043601,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0044770,GO:0044772,GO:0044786,GO:0044843,GO:0045165,GO:0046483,GO:0046982,GO:0046983,GO:0048366,GO:0048367,GO:0048731,GO:0048827,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051252,GO:0051276,GO:0051321,GO:0051716,GO:0055029,GO:0060249,GO:0060255,GO:0061695,GO:0065007,GO:0065008,GO:0070013,GO:0071704,GO:0071840,GO:0071897,GO:0080090,GO:0090304,GO:0090734,GO:0097159,GO:0097747,GO:0098687,GO:0099402,GO:0140097,GO:0140098,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902292,GO:1902295,GO:1902315,GO:1902318,GO:1902494,GO:1902969,GO:1902975,GO:1902981,GO:1903046,GO:1903047,GO:1903506,GO:1905392,GO:1990234,GO:1990837,GO:2000112,GO:2001141
Exons3
Evalue4.19e-92
EggNOG OGsCOG0417@1|root,KOG0970@2759|Eukaryota
EC2.7.7.7
Descriptionleading strand elongation
Cds size1296
COG categoryL
BRITEko00000,ko00001,ko00002,ko01000,ko03032
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186924.3704555-UTR-P-wetherbeei_contig6598:552..7291683186924.3704555-UTR-P-wetherbeei_contig6598:552..729Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6598 553..729 +
1683186924.4140618-UTR-P-wetherbeei_contig6598:2625..28481683186924.4140618-UTR-P-wetherbeei_contig6598:2625..2848Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6598 2626..2848 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186924.3820844-CDS-P-wetherbeei_contig6598:729..10441683186924.3820844-CDS-P-wetherbeei_contig6598:729..1044Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6598 730..1044 +
1683186924.391254-CDS-P-wetherbeei_contig6598:1429..17531683186924.391254-CDS-P-wetherbeei_contig6598:1429..1753Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6598 1430..1753 +
1683186924.4016712-CDS-P-wetherbeei_contig6598:1968..26251683186924.4016712-CDS-P-wetherbeei_contig6598:1968..2625Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6598 1969..2625 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6598.1.3prot_P-wetherbeei_contig6598.1.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6598 730..2625 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6598.1.3

>prot_P-wetherbeei_contig6598.1.3 ID=prot_P-wetherbeei_contig6598.1.3|Name=mRNA_P-wetherbeei_contig6598.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=432bp
MYGCLGFGGSRFCAKPIAALVTCKGRETLQRTVDIAQLQLGLDVIYGDTD
SIMINTNSTDLAAVKTVGQSVRREVNKLYRSLELELDGVFKSMLLLKKKK
YAALIELKGLDLVRRDWCPLSKDCGRFAVGRILSGEPRETVVDAIHDHVA
ALAAAVRAGTVPLEQFVITRGLNRAPHEYGNAAAEPHVQVALAMMKAGKP
VSIGNHIPYVICDWRCRQHRGASAAPGGHAPVRRRAQAGCGVVPGTSGAA
AARAPLRAHRGHQPRRARGEDGARPQQIRQLGRLWRRRRRKRRGRGRAVG
IHADDAFVRRGPLPELRTAVGAVCRVRHGGRVPRAVRVGRQERASQVGGG
AVVRAGLPGDRLRRGAARRAVRRRLLQRALPGADAGGAAASAAACGGLAG
LRGRVMRPADAPARRARRRLPRARLPQSHAR*
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mRNA from alignment at P-wetherbeei_contig6598:553..2848+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6598.1.3 ID=mRNA_P-wetherbeei_contig6598.1.3|Name=mRNA_P-wetherbeei_contig6598.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2296bp|location=Sequence derived from alignment at P-wetherbeei_contig6598:553..2848+ (Phaeothamnion wetherbeei SAG_119_79)
CTGCCGCCGCTGCCGGCGGAGGGGCAGGAGCAGGGCGTGCTACCGCGCGT CATCAAGTCGCTGGTGCTGCGCCGCCGTGAGGTGAAGAAGCTGCTAGCGG CGGCGGCGGCATCGGATGCTGTCAAGCGCGAGCAGCTCGATATCCGACAG AAGGCGCTTAAGCTGACGGCCAACTCCATGTACGGCTGCCTGGGCTTCGG CGGCAGCCGCTTCTGCGCCAAGCCCATCGCGGCGCTGGTCACATGCAAGG GCCGCGAGACGCTGCAGCGGACGGTCGACATTGCGCAGCTGCAATTGGGC CTCGACGTCATCTACGGCGACACGGACTCCATCATGATCAATACCAACTC GACGGACCTGGCGGCGGTCAAGACGGTCGGGCAGTCGGTGCGGCGGGAGG TAAACAAGCTGTACCGGTCACTCGAGCTCGAGCTGGACGGCGTCTTCAAG AGCATGCTGCTGCTGAAGAAGAAGAAGTACGCGGCGCTCATTGTGCACGA GAAGCCCGACGGCACTCTCCGCTACGAGCAGGCGAGTGGAGAGTATTGTT GTCTTTATCTCAAGGCTTTCTTTATTGCGAGAGCGGGAGAAGCGGGAAGT TCTTTGAAGGAGAAACGGGATCCGAGGAGAATATGGTGAGCTCGTCACAC GGTCCGTGCACCGGGTAAAACAAATGGCTTTTCGAAGGGGGGGTTCCATA CCTTCTTTGCCGCAAGCTTTCGTCGGCCTGCAGCCTTGCTGCTGCCTGCC ACCTTTTGCAGTGGAAGCTCATAGCCCTTCTTCGTAACTTCTTTTCTTCC GCTCTTTCCCCGACCGCCTTTCTCTTTCTTCTCGCGATCCCCTCGATCGA TTGCCGCCCGCCCCGCTGCGTCGGCAGGAGCTCAAGGGTCTGGACCTGGT GCGCCGCGACTGGTGCCCGCTCTCTAAGGATTGCGGCCGCTTCGCCGTCG GCCGCATCCTCTCCGGCGAACCGCGCGAAACCGTGGTCGATGCCATCCAC GACCATGTTGCCGCGCTGGCCGCCGCCGTCCGCGCCGGGACCGTCCCGCT CGAGCAGTTCGTCATCACGCGCGGCCTGAACCGCGCGCCGCACGAGTACG GCAACGCCGCCGCCGAGCCGCACGTCCAGGTGGCCCTCGCGATGATGAAG GCGGGAAAGCCAGTCAGCATCGGTAACCACATCCCATACGTCATCTGCGA CGTCGCCTCCATCGCCGAGGCCGCCGCTGCCGCCGCCGCCGCCGCCGCCG CCGCCGCCGCCCCCGCCAGGGCCGCCGGTAGCGCTGGCGCCGCCGGAACC GCCGCTGCCGGGGCCGCCTCGAGCGCTGTTGACGCGAGCGGCAGCGCCGC TGCTGCCGGCGGAGCCGGTGCGGCAACTGGCCTGGGCGCGGCGCCGCTGC CGCGGAGCGGGTCGAGTGGCGGTGCCGGCAACATCGCGGAGCGAGCGCGG CACCCGGAGGACATGCTCCGGTCCGGCGGCGCGCTCAAGCTGGATGTGGA GTGGTACCTGGCACTTCAGGTGCTGCCGCCGCTCGTGCGCCTTTGCGAGC CCATCGAGGGCACCAGCCGCGCCGCGCTCGCGGAGAAGATGGGGCTCGAC CCCAACAAATACGGCAACTCGGGCGGCTGTGGCGGCGGCGGCGGCGGAAA CGGCGAGGACGAGGTCGAGCAGTGGGCATTCACGCCGACGACGCGTTTGT CCGACGAGGTCCGCTTCCGGAACTGCGCACCGCTGTCGGTGCGGTGTGCC GCGTGCGGCACGGCGGGCGAGTTCCGCGGGCCGTTCGCGTGGGACGACAA GAAAGGGCTAGTCAAGTCGGCGGTGGAGCTGTCGTCAGGGCTGGCCTGCC CGGCGACCGGCTGCGGCGCGGCGCTGCGCGGCGCGCCGTCCGCCGCCGGC TGCTTCAGCGCGCTCTGCCAGGCGCTGATGCTGGCGGTGCGGCGGCATCA GCGGCGGCATGCGGTGGGCTGGCTGGCCTGCGAGGACGCGTCATGCGGCC AGCGGACGCGCCAGCTCGGCGTGCGCGGCGACGCCTGCCCCGCGCGCGGC TGCCACAGTCGCATGCGCGCTGAGTACACCGACAAGCAGCTCTACGAGCA GCTCAAGTACTTCGAGACGCTCTTCAACGTCGACCGCGCGCGGGCGCGCA TCGCGGAACGGTTCCAACTGGACCTGCGGACGCTGGCCGTGCCCGCCGAG GACGCGCAGGTCATGCAGCTGCTGTGGACGGCGGCGCGGGAGGAGGTGGA GCGCAGCGGCTACAACTGGATCCGCCCGTCACTGTGGTCGACCGTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6598:553..2848+

>mRNA_P-wetherbeei_contig6598.1.3 ID=mRNA_P-wetherbeei_contig6598.1.3|Name=mRNA_P-wetherbeei_contig6598.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1296bp|location=Sequence derived from alignment at P-wetherbeei_contig6598:553..2848+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTACGGCTGCCTGGGCTTCGGCGGCAGCCGCTTCTGCGCCAAGCCCAT
CGCGGCGCTGGTCACATGCAAGGGCCGCGAGACGCTGCAGCGGACGGTCG
ACATTGCGCAGCTGCAATTGGGCCTCGACGTCATCTACGGCGACACGGAC
TCCATCATGATCAATACCAACTCGACGGACCTGGCGGCGGTCAAGACGGT
CGGGCAGTCGGTGCGGCGGGAGGTAAACAAGCTGTACCGGTCACTCGAGC
TCGAGCTGGACGGCGTCTTCAAGAGCATGCTGCTGCTGAAGAAGAAGAAG
TACGCGGCGCTCATTGAGCTCAAGGGTCTGGACCTGGTGCGCCGCGACTG
GTGCCCGCTCTCTAAGGATTGCGGCCGCTTCGCCGTCGGCCGCATCCTCT
CCGGCGAACCGCGCGAAACCGTGGTCGATGCCATCCACGACCATGTTGCC
GCGCTGGCCGCCGCCGTCCGCGCCGGGACCGTCCCGCTCGAGCAGTTCGT
CATCACGCGCGGCCTGAACCGCGCGCCGCACGAGTACGGCAACGCCGCCG
CCGAGCCGCACGTCCAGGTGGCCCTCGCGATGATGAAGGCGGGAAAGCCA
GTCAGCATCGGTAACCACATCCCATACGTCATCTGCGACTGGCGGTGCCG
GCAACATCGCGGAGCGAGCGCGGCACCCGGAGGACATGCTCCGGTCCGGC
GGCGCGCTCAAGCTGGATGTGGAGTGGTACCTGGCACTTCAGGTGCTGCC
GCCGCTCGTGCGCCTTTGCGAGCCCATCGAGGGCACCAGCCGCGCCGCGC
TCGCGGAGAAGATGGGGCTCGACCCCAACAAATACGGCAACTCGGGCGGC
TGTGGCGGCGGCGGCGGCGGAAACGGCGAGGACGAGGTCGAGCAGTGGGC
ATTCACGCCGACGACGCGTTTGTCCGACGAGGTCCGCTTCCGGAACTGCG
CACCGCTGTCGGTGCGGTGTGCCGCGTGCGGCACGGCGGGCGAGTTCCGC
GGGCCGTTCGCGTGGGACGACAAGAAAGGGCTAGTCAAGTCGGCGGTGGA
GCTGTCGTCAGGGCTGGCCTGCCCGGCGACCGGCTGCGGCGCGGCGCTGC
GCGGCGCGCCGTCCGCCGCCGGCTGCTTCAGCGCGCTCTGCCAGGCGCTG
ATGCTGGCGGTGCGGCGGCATCAGCGGCGGCATGCGGTGGGCTGGCTGGC
CTGCGAGGACGCGTCATGCGGCCAGCGGACGCGCCAGCTCGGCGTGCGCG
GCGACGCCTGCCCCGCGCGCGGCTGCCACAGTCGCATGCGCGCTGA
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