mRNA_P-wetherbeei_contig659.7.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig659.7.1
Unique NamemRNA_P-wetherbeei_contig659.7.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig659.7.1 vs. uniprot
Match: UPI0015E23552 (ribonuclease inhibitor-like n=1 Tax=Morone saxatilis TaxID=34816 RepID=UPI0015E23552)

HSP 1 Score: 49.3 bits (116), Expect = 7.500e-5
Identity = 33/67 (49.25%), Postives = 41/67 (61.19%), Query Frame = 1 
Query:    1 TLRELDLSWNNISRGSANVLGAAVAS--AQLTILRLAHNKLGCEGCQRLAHALRRNEM-LRTLDLSF 192
            TLRELDLS+NN+      +L A + S   +L ILRL+   +  EGC  LA ALR N   LR LDLS+
Sbjct:   56 TLRELDLSYNNLKDSGVKLLSAGLKSPHCRLEILRLSGCMITEEGCTSLASALRFNPSHLRELDLSY 122
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig659.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI0015E235527.500e-549.25ribonuclease inhibitor-like n=1 Tax=Morone saxatil... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig659contigP-wetherbeei_contig659:7315..7647 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog44056.XP_009036616.1
PFAMsAT_hook,BIR,RVT_1,zf-C3HC4_3
Model size333
Max annot lvl2759|Eukaryota
KEGG koko:K16061
KEGG Pathwayko04120,ko04215,ko05145,ko05200,ko05222,map04120,map04215,map05145,map05200,map05222
Hectar predicted targeting categoryother localisation
GOsGO:0000022,GO:0000070,GO:0000075,GO:0000226,GO:0000228,GO:0000278,GO:0000280,GO:0000775,GO:0000776,GO:0000777,GO:0000778,GO:0000779,GO:0000780,GO:0000793,GO:0000794,GO:0000819,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005694,GO:0005737,GO:0005739,GO:0005819,GO:0005856,GO:0005874,GO:0005875,GO:0006915,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007059,GO:0007088,GO:0007093,GO:0007094,GO:0007346,GO:0008150,GO:0008219,GO:0008608,GO:0009987,GO:0010564,GO:0010639,GO:0010948,GO:0010965,GO:0012501,GO:0015630,GO:0016043,GO:0022402,GO:0030071,GO:0031134,GO:0031577,GO:0031974,GO:0031981,GO:0032133,GO:0032991,GO:0033043,GO:0033044,GO:0033045,GO:0033046,GO:0033047,GO:0033048,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044454,GO:0044464,GO:0045786,GO:0045839,GO:0045841,GO:0045930,GO:0048285,GO:0048519,GO:0048523,GO:0050789,GO:0050794,GO:0051128,GO:0051129,GO:0051231,GO:0051233,GO:0051276,GO:0051726,GO:0051783,GO:0051784,GO:0051983,GO:0051985,GO:0065007,GO:0070013,GO:0071173,GO:0071174,GO:0071840,GO:0098687,GO:0098813,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:0140014,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902099,GO:1902100,GO:1902850,GO:1903047,GO:1905818,GO:1905819,GO:2000816,GO:2001251
Exons1
Evalue0.000413
EggNOG OGsKOG1101@1|root,KOG1101@2759|Eukaryota
Descriptioninhibition of cysteine-type endopeptidase activity involved in apoptotic process
Cds size333
COG categoryK
BRITEko00000,ko00001,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186923.870879-CDS-P-wetherbeei_contig659:7314..76471683186923.870879-CDS-P-wetherbeei_contig659:7314..7647Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig659 7315..7647 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig659.7.1prot_P-wetherbeei_contig659.7.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig659 7315..7647 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig659.7.1

>prot_P-wetherbeei_contig659.7.1 ID=prot_P-wetherbeei_contig659.7.1|Name=mRNA_P-wetherbeei_contig659.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=111bp
TLRELDLSWNNISRGSANVLGAAVASAQLTILRLAHNKLGCEGCQRLAHA
LRRNEMLRTLDLSFTGMSARAALVMASALRDNKTLSRLGASHNPLSRSGA
RALLQAVRQRA
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mRNA from alignment at P-wetherbeei_contig659:7315..7647+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig659.7.1 ID=mRNA_P-wetherbeei_contig659.7.1|Name=mRNA_P-wetherbeei_contig659.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=333bp|location=Sequence derived from alignment at P-wetherbeei_contig659:7315..7647+ (Phaeothamnion wetherbeei SAG_119_79)
ACGCTGCGCGAGCTGGACCTCTCATGGAACAACATCTCGCGCGGCAGCGC
CAACGTCCTTGGCGCTGCCGTCGCCTCCGCGCAGCTCACCATCTTGCGGC
TTGCTCACAATAAGCTAGGCTGCGAAGGCTGCCAGCGGTTGGCGCATGCC
CTCCGTCGCAACGAAATGCTCCGCACGCTGGATTTGTCTTTCACGGGCAT
GTCAGCTCGGGCGGCACTGGTGATGGCGTCGGCGCTGCGGGACAACAAGA
CGCTGTCGCGGTTGGGGGCGTCGCATAACCCGCTGTCGCGGAGCGGCGCG
CGCGCGCTGCTGCAGGCGGTGCGCCAGCGGGCT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig659:7315..7647+

>mRNA_P-wetherbeei_contig659.7.1 ID=mRNA_P-wetherbeei_contig659.7.1|Name=mRNA_P-wetherbeei_contig659.7.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=333bp|location=Sequence derived from alignment at P-wetherbeei_contig659:7315..7647+ (Phaeothamnion wetherbeei SAG_119_79)
ACGCTGCGCGAGCTGGACCTCTCATGGAACAACATCTCGCGCGGCAGCGC
CAACGTCCTTGGCGCTGCCGTCGCCTCCGCGCAGCTCACCATCTTGCGGC
TTGCTCACAATAAGCTAGGCTGCGAAGGCTGCCAGCGGTTGGCGCATGCC
CTCCGTCGCAACGAAATGCTCCGCACGCTGGATTTGTCTTTCACGGGCAT
GTCAGCTCGGGCGGCACTGGTGATGGCGTCGGCGCTGCGGGACAACAAGA
CGCTGTCGCGGTTGGGGGCGTCGCATAACCCGCTGTCGCGGAGCGGCGCG
CGCGCGCTGCTGCAGGCGGTGCGCCAGCGGGCT
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