mRNA_P-wetherbeei_contig6587.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6587.1.1
Unique NamemRNA_P-wetherbeei_contig6587.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6587.1.1 vs. uniprot
Match: A0A836CJH9_9STRA (Metalloenzyme, LuxS/M16 peptidase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJH9_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.420e-21
Identity = 45/72 (62.50%), Postives = 58/72 (80.56%), Query Frame = 1
Query:    1 GIADRKMEVDQRLAQEATRNWDEIVGGEFRFDRRIEEAAALRRVTPAALLVFWDRYMAAGAIERRVLTSQVF 216
            G+A ++ E DQRLAQEATRNWDEI+GGEF+FDRR+ EA  L++VT A LL F+D+Y+A G   RR +TSQV+
Sbjct:  932 GLAAQRTEPDQRLAQEATRNWDEIIGGEFKFDRRVREAQLLQKVTTAQLLAFFDKYIAEGGEGRRCITSQVW 1003          
BLAST of mRNA_P-wetherbeei_contig6587.1.1 vs. uniprot
Match: A0A7S1XUG1_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUG1_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 1.040e-8
Identity = 33/80 (41.25%), Postives = 46/80 (57.50%), Query Frame = 1
Query:    4 IADRKMEVDQRLAQEATRNWDEIVGGEFRFDRRIEEAAALRRVTPAA---------LLVFWDRYMAAGAIERRVLTSQVF 216
            +A +K+EVDQRL+ E  R+W EI  GE R++RR+ EA AL++V  A          +L F+D  +      RR   SQVF
Sbjct:  668 LAQKKLEVDQRLSGEVGRHWTEIQTGELRWNRRLAEAVALQQVATATAGADGKTPGVLAFFDEVVGLNGGRRRAAVSQVF 747          
BLAST of mRNA_P-wetherbeei_contig6587.1.1 vs. uniprot
Match: A0A251TIK4_HELAN (Putative insulinase (Peptidase family M16) family protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251TIK4_HELAN)

HSP 1 Score: 56.6 bits (135), Expect = 1.280e-7
Identity = 26/71 (36.62%), Postives = 48/71 (67.61%), Query Frame = 1
Query:    4 IADRKMEVDQRLAQEATRNWDEIVGGEFRFDRRIEEAAALRRVTPAALLVFWDRYMAAGAIERRVLTSQVF 216
            + + K+E  + L +E++  W EI  G  +FDR+  E AAL+++T A L+ F+D+++ AGA +++ L+ QV+
Sbjct:  853 LIEMKLEKHKNLREESSYFWREIQDGTLKFDRKEYEVAALKQLTKAELIEFFDQHIKAGAPQKKALSVQVY 923          
BLAST of mRNA_P-wetherbeei_contig6587.1.1 vs. uniprot
Match: A0A2J6KKG1_LACSA (Uncharacterized protein n=2 Tax=Lactuca TaxID=4235 RepID=A0A2J6KKG1_LACSA)

HSP 1 Score: 55.1 bits (131), Expect = 4.460e-7
Identity = 25/67 (37.31%), Postives = 45/67 (67.16%), Query Frame = 1
Query:   16 KMEVDQRLAQEATRNWDEIVGGEFRFDRRIEEAAALRRVTPAALLVFWDRYMAAGAIERRVLTSQVF 216
            K+E  + L +E++  W EI  G  +FDR+  E AAL++++ A ++ F+D ++ AGA +++ L+ QVF
Sbjct:  856 KLEKHKNLREESSYFWREIQDGTLKFDRKDHEVAALKQLSKAEMIQFFDEHIKAGAPQKKALSVQVF 922          
BLAST of mRNA_P-wetherbeei_contig6587.1.1 vs. uniprot
Match: A0A5N6PD65_9ASTR (Uncharacterized protein n=6 Tax=Asteraceae TaxID=4210 RepID=A0A5N6PD65_9ASTR)

HSP 1 Score: 55.1 bits (131), Expect = 4.460e-7
Identity = 27/71 (38.03%), Postives = 45/71 (63.38%), Query Frame = 1
Query:    4 IADRKMEVDQRLAQEATRNWDEIVGGEFRFDRRIEEAAALRRVTPAALLVFWDRYMAAGAIERRVLTSQVF 216
            + + K+E  + L +E+   W EI  G  +FDR+  E AAL+++T A L+ F+D Y+ AGA  ++ L+ QV+
Sbjct:  855 LIEMKLEKHKNLREESGYFWREIQDGTLKFDRKEYEVAALKQLTKAELIQFFDEYIKAGAPLKKALSVQVY 925          
BLAST of mRNA_P-wetherbeei_contig6587.1.1 vs. uniprot
Match: A0A2U1LWG8_ARTAN (Insulinase (Peptidase family M16) family protein n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1LWG8_ARTAN)

HSP 1 Score: 53.9 bits (128), Expect = 1.140e-6
Identity = 25/71 (35.21%), Postives = 45/71 (63.38%), Query Frame = 1
Query:    4 IADRKMEVDQRLAQEATRNWDEIVGGEFRFDRRIEEAAALRRVTPAALLVFWDRYMAAGAIERRVLTSQVF 216
            + + K+E  + L +E+   W EI  G  +FDR+  E  AL+++T A L+ F+D ++ AGA +++ L+ QV+
Sbjct:  847 LIEMKLEKHKNLREESGYYWREIQDGTLKFDRKEYEVEALKQLTKAELIQFYDEHIKAGAPQKKALSVQVY 917          
BLAST of mRNA_P-wetherbeei_contig6587.1.1 vs. uniprot
Match: A0A0M0JBL1_9EUKA (Insulin-degrading enzyme n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JBL1_9EUKA)

HSP 1 Score: 53.5 bits (127), Expect = 1.560e-6
Identity = 30/71 (42.25%), Postives = 42/71 (59.15%), Query Frame = 1
Query:    4 IADRKMEVDQRLAQEATRNWDEIVGGEFRFDRRIEEAAALRRVTPAALLVFWDRYMAAGAIERRVLTSQVF 216
            +A +  +VDQRL Q+A+R W EIV   + + R    A  LR VT   LL F+D ++A GA E R L + V+
Sbjct:  922 LASQVTDVDQRLGQQASRLWTEIVTRRYDYGRPWRSAKRLRGVTREQLLHFFDAHVAPGAPEGRRLVTHVY 992          
BLAST of mRNA_P-wetherbeei_contig6587.1.1 vs. uniprot
Match: A0A812XGP4_SYMPI (Peptidylprolyl isomerase n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812XGP4_SYMPI)

HSP 1 Score: 50.1 bits (118), Expect = 2.630e-5
Identity = 27/68 (39.71%), Postives = 40/68 (58.82%), Query Frame = 1
Query:    4 IADRKMEVDQRLAQEATRNWDEIVGGEFRFDRRIEEAAALRRVTPAALLVFWDRYMAAGAIERRVLTS 207
            +A+ ++   Q+L + + R W EI    FR+ RR+EEA AL+ V  A +   + R+MA G  ERR L S
Sbjct:  892 LAEARLVRPQQLLESSQRRWAEICSRSFRWQRRLEEALALKAVIKADVQEAFLRWMAPGGAERRRLVS 959          
BLAST of mRNA_P-wetherbeei_contig6587.1.1 vs. uniprot
Match: UPI0012D45B5F (nardilysin-like n=1 Tax=Contarinia nasturtii TaxID=265458 RepID=UPI0012D45B5F)

HSP 1 Score: 48.5 bits (114), Expect = 9.180e-5
Identity = 25/61 (40.98%), Postives = 36/61 (59.02%), Query Frame = 1
Query:   16 KMEVDQRLAQEATRNWDEIVGGEFRFDRRIEEAAALRRVTPAALLVFWDRYMAAGAIERRV 198
            K+  D +L++E TRNW EI   E+ FDR+ +E   L  +T A LL F+  Y   G  ER++
Sbjct:  977 KLNEDNKLSEEVTRNWAEITTDEYEFDRQHKEVDYLSTITKAQLLEFYRTYY--GNAERKL 1035          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6587.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A836CJH9_9STRA1.420e-2162.50Metalloenzyme, LuxS/M16 peptidase-like protein n=1... [more]
A0A7S1XUG1_9STRA1.040e-841.25Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A251TIK4_HELAN1.280e-736.62Putative insulinase (Peptidase family M16) family ... [more]
A0A2J6KKG1_LACSA4.460e-737.31Uncharacterized protein n=2 Tax=Lactuca TaxID=4235... [more]
A0A5N6PD65_9ASTR4.460e-738.03Uncharacterized protein n=6 Tax=Asteraceae TaxID=4... [more]
A0A2U1LWG8_ARTAN1.140e-635.21Insulinase (Peptidase family M16) family protein n... [more]
A0A0M0JBL1_9EUKA1.560e-642.25Insulin-degrading enzyme n=1 Tax=Chrysochromulina ... [more]
A0A812XGP4_SYMPI2.630e-539.71Peptidylprolyl isomerase n=1 Tax=Symbiodinium pilo... [more]
UPI0012D45B5F9.180e-540.98nardilysin-like n=1 Tax=Contarinia nasturtii TaxID... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6587contigP-wetherbeei_contig6587:1142..1357 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LRX2
PFAMsPeptidase_M16,Peptidase_M16_C,Peptidase_M16_M
Model size216
Max annot lvl2759|Eukaryota
KEGG koko:K01408
KEGG Pathwayko05010,map05010
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.13e-13
EggNOG OGsCOG1025@1|root,KOG0959@2759|Eukaryota
EC3.4.24.56
Descriptionmetalloendopeptidase activity
Cds size198
COG categoryO
BRITEko00000,ko00001,ko01000,ko01002
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186923.6453927-CDS-P-wetherbeei_contig6587:1141..13391683186923.6453927-CDS-P-wetherbeei_contig6587:1141..1339Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6587 1142..1339 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186923.6576655-UTR-P-wetherbeei_contig6587:1339..13571683186923.6576655-UTR-P-wetherbeei_contig6587:1339..1357Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6587 1340..1357 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6587.1.1prot_P-wetherbeei_contig6587.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6587 1142..1339 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6587.1.1

>prot_P-wetherbeei_contig6587.1.1 ID=prot_P-wetherbeei_contig6587.1.1|Name=mRNA_P-wetherbeei_contig6587.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=66bp
MEVDQRLAQEATRNWDEIVGGEFRFDRRIEEAAALRRVTPAALLVFWDRY
MAAGAIERRVLTSQVF
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mRNA from alignment at P-wetherbeei_contig6587:1142..1357-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6587.1.1 ID=mRNA_P-wetherbeei_contig6587.1.1|Name=mRNA_P-wetherbeei_contig6587.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=216bp|location=Sequence derived from alignment at P-wetherbeei_contig6587:1142..1357- (Phaeothamnion wetherbeei SAG_119_79)
GGCATTGCGGACCGTAAAATGGAGGTCGACCAGCGGCTGGCGCAGGAAGC GACGCGAAACTGGGACGAGATAGTCGGCGGCGAGTTTCGCTTCGACCGGC GGATCGAGGAGGCGGCGGCGCTGCGGCGGGTGACGCCGGCGGCGCTGCTC GTGTTTTGGGACCGCTACATGGCGGCGGGCGCTATCGAACGGCGCGTGCT GACCAGCCAGGTGTTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6587:1142..1357-

>mRNA_P-wetherbeei_contig6587.1.1 ID=mRNA_P-wetherbeei_contig6587.1.1|Name=mRNA_P-wetherbeei_contig6587.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=198bp|location=Sequence derived from alignment at P-wetherbeei_contig6587:1142..1357- (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGGTCGACCAGCGGCTGGCGCAGGAAGCGACGCGAAACTGGGACGA
GATAGTCGGCGGCGAGTTTCGCTTCGACCGGCGGATCGAGGAGGCGGCGG
CGCTGCGGCGGGTGACGCCGGCGGCGCTGCTCGTGTTTTGGGACCGCTAC
ATGGCGGCGGGCGCTATCGAACGGCGCGTGCTGACCAGCCAGGTGTTT
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