prot_P-wetherbeei_contig6584.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6584.1.2
Unique Nameprot_P-wetherbeei_contig6584.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length574
Homology
BLAST of mRNA_P-wetherbeei_contig6584.1.2 vs. uniprot
Match: A0A835YX71_9STRA (Violaxanthin de-epoxidase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX71_9STRA)

HSP 1 Score: 333 bits (853), Expect = 1.580e-105
Identity = 159/273 (58.24%), Postives = 189/273 (69.23%), Query Frame = 0
Query:  192 RKIDYACIASKCGGAVVAAARDQRALHELTCLSSCGIDDIACQMRCGDMYEQDVLRNFHVCAIAEHHCVPQRRDIGRHMLPDPAALPATFEPERFSGEWFITHGLNGVFDCFDCQRHIVRGEPGKMVVDVEYRVARTAGGSSSLADAVFGAGGXXXXXXXEGAEDAEGTFTRSLRQTFLQDPEHPGVLQAADNGYLHQRDDWFILDADPDSHMLVYYTGCNDAWCGYVGGVVYSRTPQLAAETRSRLVATAAAFGIRFQDMCSTDNSCALHSR 464
            R+IDY C+A +CG  ++ AA D RALHEL+CLS C  +DI CQM+CGD+Y+ +VLR+F VCA+++H C+PQR D     LPDPAALP TF PE++SGEW+ITHGLN +FDCFDCQRH V G PG+++VDVEY V     G                             FTR LRQ F+Q  EHP VL AAD GYLHQRDDW+ILDADP  +MLVYYTGCNDAWCGYVGGVVYSR P L   TR+ L   A  FGI+F DMC TDNSC+L +R
Sbjct:   27 RQIDYGCLACQCGATMLQAATDPRALHELSCLSMCDANDIGCQMKCGDLYKDEVLRDFQVCALSKHKCLPQRVD-STASLPDPAALPRTFNPEQYSGEWYITHGLNPIFDCFDCQRHKVTGRPGQLIVDVEYDVQPEGRGQR---------------------------FTRQLRQVFVQSEEHPTVLTAADPGYLHQRDDWYILDADPAKYMLVYYTGCNDAWCGYVGGVVYSRAPVLDDATRAHLQRVATNFGIKFSDMCQTDNSCSLRAR 271          
BLAST of mRNA_P-wetherbeei_contig6584.1.2 vs. uniprot
Match: A0A0G4GWM3_VITBC (VDE domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GWM3_VITBC)

HSP 1 Score: 234 bits (596), Expect = 1.820e-68
Identity = 127/303 (41.91%), Postives = 166/303 (54.79%), Query Frame = 0
Query:  194 IDYACIASKCGGAVVAAARDQRALHELTCLSSCGIDDIACQMRCGDMYEQDVLRNFHVCAIAEHHCVPQRRDIGRH------------------MLPDPAALP------ATFEPERFSGEWFITHGLNGVFDCFDCQRH---IVRGEPGKMVVDVE------YRVARTAGGSSSLADAVFGAGGXXXXXXXEGAEDAEGTFTRSLRQTFLQDPEHPGVLQAADNGYLHQRDDWFILDADPDSHMLVYYTGCNDAWCGYVGGVVYSRTPQLAAETRSRLVATAAAFGIRFQDMCSTDNSCALHS 463
            +DY  + +KCGG ++ A  D+R LHE  CL  CG+DDIACQMRCGD+YE+DVL+ FH+CAI+EH  +PQR D  RH                   LP  + +       A  EP    GEW++ +GLN VFDCF CQ H   +V+  PGK    V       + + R   G+ + A+ V             G  D +  FTR + Q F      PGVL++ D  YLHQ DDW+IL ADP+ + +VYY GCNDAWCGY GGVVYSRTP+ +  T   +       G+    MC  DN+C+L S
Sbjct:   31 VDYYGLLTKCGGPLLRAMSDRRGLHEFVCLMKCGMDDIACQMRCGDLYEEDVLKEFHICAISEHQVIPQRID--RHAAEGRVRDDQGKSEQVARQLPGASEVDRRIPVVAALEPAALQGEWWVVYGLNPVFDCFPCQHHTASVVKSAPGKTSEAVRSDDGAPHPIMRWKNGAWTAANGVRFDISYRVPVPHGG--DKQPFFTRHVEQVFFPHRSSPGVLRSHDPTYLHQSDDWYILSADPERYFIVYYMGCNDAWCGYDGGVVYSRTPEPSQATIDDVREALRCAGLSIVSMCPVDNACSLQS 329          
BLAST of mRNA_P-wetherbeei_contig6584.1.2 vs. uniprot
Match: A0A6V2ZBH3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2ZBH3_HETAK)

HSP 1 Score: 192 bits (487), Expect = 5.570e-52
Identity = 100/266 (37.59%), Postives = 142/266 (53.38%), Query Frame = 0
Query:  195 DYACIASKCGGAVVAAARDQRALHELTCLSSCGIDDIACQMRCGDMYEQDV-LRNFHVCAIAEHHCVPQRRDIGRHMLPDPAALPATFEPERFSGEWFITHGLNGVFDCFDCQRHIVRGEPGKMV-VDVEYRVARTAGGSSSLADAVFGAGGXXXXXXXEGAEDAEGTFTRSLRQTFLQDPEHPGVLQAADNGYLHQRDDWFILDADPDS-HMLVYYTGCNDAWCGYVGGVVYSRTPQLAAETRSRLVATAAAFGIRFQDMCSTDN 457
            D  C+   C   ++ A    R   E+ CL++CG +D  CQM+C +M+E    L++F  C + +H C+PQR ++G + +P P  L  +F  E + G W+ITHG+N V DCF  Q H   G     V VD+ Y V             VF                    + R + +TF Q  E PG+++A+    LHQ DDW+IL A+ +  +M+VYY GCNDAWCGY GG VYSRTP L+ E +  + A  +A GI F  MC+ D+
Sbjct:  126 DVGCMTKNCATELLEAWNSPRGRKEILCLNTCGPNDTGCQMKCVNMHEDPTALKDFTSCVVGKHRCLPQRNEVGLNWVPPPNTLVQSFNLEDYLGHWYITHGMNQVLDCFPSQEHQWVGITSNTVQVDIAYEVESF--NPRKPVSNVF--------------------YRRDMSETFFQSLESPGLMKASGETDLHQNDDWYILGANKEKGYMIVYYIGCNDAWCGYNGGNVYSRTPALSEEAKKEVEAITSAAGINFNSMCAVDH 369          
BLAST of mRNA_P-wetherbeei_contig6584.1.2 vs. uniprot
Match: A0A314ZVA0_PRUYE (VDE domain-containing protein n=1 Tax=Prunus yedoensis var. nudiflora TaxID=2094558 RepID=A0A314ZVA0_PRUYE)

HSP 1 Score: 191 bits (485), Expect = 7.770e-52
Identity = 102/269 (37.92%), Postives = 143/269 (53.16%), Query Frame = 0
Query:  197 ACIASKCGGAVVAAARDQRALHELTCLSSCGI--DDIACQMRCGDMYEQDVLRNFHVCAIAEHHCVPQRRDIGRHMLPDPAALPATFEPERFSGEWFITHGLNGVFDCFDCQRHIVRGEPGKMVVDVEYRVARTAGGSSSLADAVFGAGGXXXXXXXEGAEDAEGTFTRSLRQTFLQDPEHPGVLQAADNGYLHQRDDWFILDAD----PDSHMLVYYTGCNDAWCGYVGGVVYSRTPQLAAETRSRLVATAAAFGIRFQDMCSTDNSC 459
            AC+  +C   +     +      + CL +C    D+  CQ++CGD++E  V+  F+ CA++   CVP++ D+G   +PDPA L  +F+ E+F+G+WFIT GLN  FD FDCQ H    E  K+V ++ +R+ RT  G                           G FTRS  Q F+QDP  PG+L   DN YLH +DDW+IL +     PD ++ VYY G NDAW GY G V+Y+R+  L A     L   AA+ G  F     TDN+C
Sbjct:  110 ACLLKECRLELAKCIGNPSCAANIACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPKKSDVGEFPIPDPAVLVKSFDIEKFNGKWFITSGLNPTFDTFDCQLHEFHTESSKLVGNLSWRI-RTPDG---------------------------GFFTRSAVQKFVQDPNQPGILYNHDNDYLHYQDDWYILSSKMENKPDDYIFVYYRGRNDAWDGYGGAVIYTRSSVLPASIVPDLEKAAASVGRDFSKFIRTDNTC 350          
BLAST of mRNA_P-wetherbeei_contig6584.1.2 vs. uniprot
Match: M5W4K8_PRUPE (VDE domain-containing protein n=14 Tax=Prunus TaxID=3754 RepID=M5W4K8_PRUPE)

HSP 1 Score: 192 bits (487), Expect = 5.160e-51
Identity = 102/269 (37.92%), Postives = 143/269 (53.16%), Query Frame = 0
Query:  197 ACIASKCGGAVVAAARDQRALHELTCLSSCGI--DDIACQMRCGDMYEQDVLRNFHVCAIAEHHCVPQRRDIGRHMLPDPAALPATFEPERFSGEWFITHGLNGVFDCFDCQRHIVRGEPGKMVVDVEYRVARTAGGSSSLADAVFGAGGXXXXXXXEGAEDAEGTFTRSLRQTFLQDPEHPGVLQAADNGYLHQRDDWFILDAD----PDSHMLVYYTGCNDAWCGYVGGVVYSRTPQLAAETRSRLVATAAAFGIRFQDMCSTDNSC 459
            AC+  +C   +     +      + CL +C    D+  CQ++CGD++E  V+  F+ CA++   CVP++ D+G   +PDPA L  +F+ E+F+G+WFIT GLN  FD FDCQ H    E  K+V ++ +R+ RT  G                           G FTRS  Q F+QDP  PG+L   DN YLH +DDW+IL +     PD ++ VYY G NDAW GY G V+Y+R+  L A     L   AA+ G  F     TDN+C
Sbjct:  144 ACLLKECRVELAKCIGNPSCAANIACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPKKSDVGEFPIPDPAVLVKSFDIEKFNGKWFITSGLNPTFDAFDCQLHEFHTESSKLVGNLSWRI-RTPDG---------------------------GFFTRSAVQKFVQDPNQPGILYNHDNDYLHYQDDWYILSSKMENKPDDYIFVYYRGRNDAWDGYGGAVIYTRSSVLPASIVPDLEKAAASVGRDFSKFIRTDNTC 384          
BLAST of mRNA_P-wetherbeei_contig6584.1.2 vs. uniprot
Match: A0A7S2SKA3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKA3_9STRA)

HSP 1 Score: 186 bits (472), Expect = 2.960e-50
Identity = 117/317 (36.91%), Postives = 160/317 (50.47%), Query Frame = 0
Query:  146 LRHGIVRVAASAAVAAVFAAGWLGGGGVASTMAAFEELREDGVVVERKIDYACIASKCGGAVVAAARDQRALHELTCLSSCG--IDDIACQMRCGDMYEQDVLRNFHVCAIAEHHCVPQRRDIGRHMLPDPAALPATFEPERFSGEWFITHGLNGVFDCFDCQRHIVRG-EPGKMVVDVEYRVARTAGGSSSLADAVFGAGGXXXXXXXEGAEDAEGTFTRSLRQTFLQDPEHPGVLQAADNGYLHQRDDWFILDADPDSHMLVYYTGCNDAWCGYVGGVVYSRTPQLAAETRSRLVATAAAFGIRFQDMCSTDNSC 459
            + HGI   AA A V +V  A  L  G  AS  A       DG  + +     CI S C   +     + + L  L C+ +C    D+ ACQ+RCGD++E +V+  F+ CA+++  CVPQR+D G   +P  +AL  +F  ++F G W+I+ GLN +FD F CQ H     +PG +   + +R+           D  F                    FTR+  Q F QDP  PGVL   DN YLH +DDW+ILD+D D  +LVYY G NDAW GY G V+Y+R P +      R+ A A   G+ F     TDNSC
Sbjct:    1 MEHGIA--AAKACVVSVAMAAVLSFGAPASVEAL------DGAAIGK-----CILSSCQLELAKCVSNPKCLANLACIQTCNGRPDESACQIRCGDIFENEVVGEFNACAVSQKRCVPQRQDDGTFPVPPESALVRSFNTKQFEGRWYISAGLNPIFDTFPCQVHFFTSPKPGLLYGKLNWRIVEP--------DGEF--------------------FTRNAVQRFKQDPSMPGVLYNHDNEYLHYQDDWYILDSDKD-FVLVYYRGRNDAWDGYGGAVLYTRQPTVPTAIIPRVEAAAERAGLDFSKFVQTDNSC 275          
BLAST of mRNA_P-wetherbeei_contig6584.1.2 vs. uniprot
Match: A0A2V0NNX6_9CHLO (VDE domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NNX6_9CHLO)

HSP 1 Score: 188 bits (478), Expect = 4.530e-50
Identity = 103/268 (38.43%), Postives = 136/268 (50.75%), Query Frame = 0
Query:  198 CIASKCGGAVVAAARDQRALHELTCLSSCG--IDDIACQMRCGDMYEQDVLRNFHVCAIAEHHCVPQRRDIGRHMLPDPAALPATFEPERFSGEWFITHGLNGVFDCFDCQRHIVRG-EPGKMVVDVEYRVARTAGGSSSLADAVFGAGGXXXXXXXEGAEDAEGTFTRSLRQTFLQDPEHPGVLQAADNGYLHQRDDWFILDADPDSHMLVYYTGCNDAWCGYVGGVVYSRTPQLAAETRSRLVATAAAFGIRFQDMCSTDNSCALH 462
            C+ SKC  A+     D + +  L CL+ C    D+ ACQ+RCGD Y    +  F+ CA++E  CVPQR D     +P  +AL   F+    +G WFIT GLN +FD FDCQ H     EPG M   + +R+++  G                               TRS  Q F+QD   PG+L    N YLH  DDW+I+ + P+S++ VYY G NDAW GY G VVY+R  QL AE    L   AA  G  ++D   TDN+C  H
Sbjct:  105 CLLSKCQTALARCLADGQCVQNLVCLNLCNGAADETACQIRCGDQYGDAAIDTFNSCAVSEQKCVPQRVDENLFPVPPDSALDPEFDLSGLTGRWFITAGLNPLFDIFDCQEHFFANPEPGHMKAQINWRISKPRGDFQ----------------------------TRSTIQNFVQDETRPGILYNHGNEYLHYEDDWYIIASKPESYVFVYYRGNNDAWRGYGGAVVYTRDRQLPAEIIPELKEAAAKVGRDWKDFVVTDNTCGPH 344          
BLAST of mRNA_P-wetherbeei_contig6584.1.2 vs. uniprot
Match: UPI0009E55CCA (violaxanthin de-epoxidase, chloroplastic-like n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E55CCA)

HSP 1 Score: 189 bits (480), Expect = 5.680e-50
Identity = 99/268 (36.94%), Postives = 140/268 (52.24%), Query Frame = 0
Query:  198 CIASKCGGAVVAAARDQRALHELTCLSSCGI--DDIACQMRCGDMYEQDVLRNFHVCAIAEHHCVPQRRDIGRHMLPDPAALPATFEPERFSGEWFITHGLNGVFDCFDCQRHIVRGEPGKMVVDVEYRVARTAGGSSSLADAVFGAGGXXXXXXXEGAEDAEGTFTRSLRQTFLQDPEHPGVLQAADNGYLHQRDDWFILDAD----PDSHMLVYYTGCNDAWCGYVGGVVYSRTPQLAAETRSRLVATAAAFGIRFQDMCSTDNSC 459
            C+  +C G +V    +      + CL +C    D+  CQ++CGD++E +V+  F+ CA++   CVP + D+G   +P P+AL   F    F+G+W+IT GLN  FD FDCQ H    E GK++ ++ +RV RT  G                           G   RS  Q F+QDP  PG+L   DN YLH +DDW++L +     PD ++ +YY G NDAW GY G VVY+R+PQL A     L   A   G  F    +TDN+C
Sbjct:  146 CLLRECRGELVRCISNPACAANIACLQTCNDRPDETECQIKCGDLFENNVVDEFNECAVSRKKCVPMKGDVGEFPVPSPSALVRNFNMSDFNGKWYITRGLNPTFDTFDCQLHEFHVESGKLIGNISWRV-RTPDG---------------------------GFLARSTLQRFVQDPSQPGILYNHDNEYLHYQDDWYVLSSKVENKPDDYIFIYYRGRNDAWDGYGGAVVYTRSPQLPATIIPELENAAKKVGRDFTKFIATDNTC 385          
BLAST of mRNA_P-wetherbeei_contig6584.1.2 vs. uniprot
Match: A0A7J0GUQ5_9ERIC (Non-photochemical quenching 1 n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0GUQ5_9ERIC)

HSP 1 Score: 184 bits (468), Expect = 1.440e-49
Identity = 97/269 (36.06%), Postives = 136/269 (50.56%), Query Frame = 0
Query:  197 ACIASKCGGAVVAAARDQRALHELTCLSSCGI--DDIACQMRCGDMYEQDVLRNFHVCAIAEHHCVPQRRDIGRHMLPDPAALPATFEPERFSGEWFITHGLNGVFDCFDCQRHIVRGEPGKMVVDVEYRVARTAGGSSSLADAVFGAGGXXXXXXXEGAEDAEGTFTRSLRQTFLQDPEHPGVLQAADNGYLHQRDDWFILDAD----PDSHMLVYYTGCNDAWCGYVGGVVYSRTPQLAAETRSRLVATAAAFGIRFQDMCSTDNSC 459
            AC+  +C   +     +      + CL +C    D+  CQ++CGD++E  V+  F+ CA++   CVPQ+ D+G   +PDP  +   F  + FSG+WFIT GLN  FD FDCQ H    E  K+V ++ +R+    GG                              TRS  Q F+QDP HPG+L   DN YLH +DDW+IL +     PD ++ VYY G NDAW GY G VVY+R+  L       L   A + G  F +   T+N+C
Sbjct:   39 ACLLKECRFELAKCIANPSCAANVACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPQKSDVGDFPVPDPTLIVRNFSIKDFSGKWFITSGLNPTFDTFDCQLHEFHTESNKLVGNISWRIGTPDGGF----------------------------ITRSTVQRFVQDPNHPGILYNHDNEYLHYQDDWYILSSKIENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPLSIVPELEKAAQSVGRNFNEFIRTNNTC 279          
BLAST of mRNA_P-wetherbeei_contig6584.1.2 vs. uniprot
Match: A0A5D2NFG1_GOSTO (VDE domain-containing protein n=8 Tax=Gossypium TaxID=3633 RepID=A0A5D2NFG1_GOSTO)

HSP 1 Score: 187 bits (476), Expect = 1.850e-49
Identity = 103/268 (38.43%), Postives = 137/268 (51.12%), Query Frame = 0
Query:  198 CIASKCGGAVVAAARDQRALHELTCLSSCGI--DDIACQMRCGDMYEQDVLRNFHVCAIAEHHCVPQRRDIGRHMLPDPAALPATFEPERFSGEWFITHGLNGVFDCFDCQRHIVRGEPGKMVVDVEYRVARTAGGSSSLADAVFGAGGXXXXXXXEGAEDAEGTFTRSLRQTFLQDPEHPGVLQAADNGYLHQRDDWFILDAD----PDSHMLVYYTGCNDAWCGYVGGVVYSRTPQLAAETRSRLVATAAAFGIRFQDMCSTDNSC 459
            C+  +C   +     +      + CL +C    D+  CQ++CGD++E  V+  F+ CA++   CVPQ+ DIG   +PDPA L   F    F+G+WFI+ GLN  FD FDCQ H    E GK+V ++ +R+ RT  G                           G FTRS  Q FLQDP HPG+L   DN YLH +DDW+I+ +     PD ++ VYY G NDAW GY G VVY+R+  L       L   A   G  F     TDNSC
Sbjct:  140 CLLKECRIELAKCIANPSCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPQKSDIGEFPVPDPAVLVENFNIADFTGKWFISSGLNPTFDTFDCQLHEFHIEGGKLVGNLSWRI-RTPDG---------------------------GFFTRSATQRFLQDPNHPGILYNHDNEYLHYQDDWYIISSKIENKPDDYVFVYYRGRNDAWDGYGGAVVYTRSAVLPETIVPELKRAAQNVGRNFNKFIRTDNSC 379          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6584.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YX71_9STRA1.580e-10558.24Violaxanthin de-epoxidase-domain-containing protei... [more]
A0A0G4GWM3_VITBC1.820e-6841.91VDE domain-containing protein n=1 Tax=Vitrella bra... [more]
A0A6V2ZBH3_HETAK5.570e-5237.59Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A314ZVA0_PRUYE7.770e-5237.92VDE domain-containing protein n=1 Tax=Prunus yedoe... [more]
M5W4K8_PRUPE5.160e-5137.92VDE domain-containing protein n=14 Tax=Prunus TaxI... [more]
A0A7S2SKA3_9STRA2.960e-5036.91Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2V0NNX6_9CHLO4.530e-5038.43VDE domain-containing protein n=1 Tax=Raphidocelis... [more]
UPI0009E55CCA5.680e-5036.94violaxanthin de-epoxidase, chloroplastic-like n=1 ... [more]
A0A7J0GUQ5_9ERIC1.440e-4936.06Non-photochemical quenching 1 n=1 Tax=Actinidia ru... [more]
A0A5D2NFG1_GOSTO1.850e-4938.43VDE domain-containing protein n=8 Tax=Gossypium Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012674CalycinGENE3D2.40.128.20coord: 264..465
e-value: 1.4E-50
score: 173.6
IPR012674CalycinSUPERFAMILY50814Lipocalinscoord: 363..460
IPR010788VDE lipocalin domainPFAMPF07137VDEcoord: 196..457
e-value: 2.5E-75
score: 253.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 346..365
NoneNo IPR availablePANTHERPTHR33970:SF1VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTICcoord: 190..460
IPR044682Violaxanthin de-epoxidasePANTHERPTHR33970VIOLAXANTHIN DE-EPOXIDASE, CHLOROPLASTIC-RELATEDcoord: 190..460

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6584contigP-wetherbeei_contig6584:348..2836 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6584.1.2mRNA_P-wetherbeei_contig6584.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6584 2..2892 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6584.1.2 ID=prot_P-wetherbeei_contig6584.1.2|Name=mRNA_P-wetherbeei_contig6584.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=574bp
MHHLPRQCSCVRRRAGEDESQRTFILSAPAALPLNRRRRGRRRRIERLCS
VTVIAACVRIGLLLGIGGAFALGVQHHVGVLGVTTPLPDARVPVTTTDGT
GTAWTRGRKRSRATTAPDRPECSVSLNEEQRRPERPEETNRSLGGLRHGI
VRVAASAAVAAVFAAGWLGGGGVASTMAAFEELREDGVVVERKIDYACIA
SKCGGAVVAAARDQRALHELTCLSSCGIDDIACQMRCGDMYEQDVLRNFH
VCAIAEHHCVPQRRDIGRHMLPDPAALPATFEPERFSGEWFITHGLNGVF
DCFDCQRHIVRGEPGKMVVDVEYRVARTAGGSSSLADAVFGAGGGGGTGA
GEGAEDAEGTFTRSLRQTFLQDPEHPGVLQAADNGYLHQRDDWFILDADP
DSHMLVYYTGCNDAWCGYVGGVVYSRTPQLAAETRSRLVATAAAFGIRFQ
DMCSTDNSCALHSRGVGDGAAAAGTDTTSTAAVVVSNAGTCGAAADGEVL
ATPALSALADSFALADSLALVAARTNELGGCAAEVEVAMDGADAALAAEG
TAAEAAGLGAMVIASAPVRSTPI*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012674Calycin
IPR010788VDE_dom
IPR044682VDE