mRNA_P-wetherbeei_contig6584.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6584.1.2
Unique NamemRNA_P-wetherbeei_contig6584.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6584.1.2 vs. uniprot
Match: A0A835YX71_9STRA (Violaxanthin de-epoxidase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX71_9STRA)

HSP 1 Score: 333 bits (853), Expect = 6.470e-104
Identity = 159/273 (58.24%), Postives = 189/273 (69.23%), Query Frame = 3
Query:  630 RKIDYACIASKCGGAVVAAARDQRALHELTCLSSCGIDDIACQMRCGDMYEQDVLRNFHVCAIAEHHCVPQRRDIGRHMLPDPAALPATFEPERFSGEWFITHGLNGVFDCFDCQRHIVRGEPGKMVVDVEYRVARTAGGSSSLADAVFGAGGXXXXXXXEGAEDAEGTFTRSLRQTFLQDPEHPGVLQAADNGYLHQRDDWFILDADPDSHMLVYYTGCNDAWCGYVGGVVYSRTPQLAAETRSRLVATAAAFGIRFQDMCSTDNSCALHSR 1448
            R+IDY C+A +CG  ++ AA D RALHEL+CLS C  +DI CQM+CGD+Y+ +VLR+F VCA+++H C+PQR D     LPDPAALP TF PE++SGEW+ITHGLN +FDCFDCQRH V G PG+++VDVEY V     G                             FTR LRQ F+Q  EHP VL AAD GYLHQRDDW+ILDADP  +MLVYYTGCNDAWCGYVGGVVYSR P L   TR+ L   A  FGI+F DMC TDNSC+L +R
Sbjct:   27 RQIDYGCLACQCGATMLQAATDPRALHELSCLSMCDANDIGCQMKCGDLYKDEVLRDFQVCALSKHKCLPQRVD-STASLPDPAALPRTFNPEQYSGEWYITHGLNPIFDCFDCQRHKVTGRPGQLIVDVEYDVQPEGRGQR---------------------------FTRQLRQVFVQSEEHPTVLTAADPGYLHQRDDWYILDADPAKYMLVYYTGCNDAWCGYVGGVVYSRAPVLDDATRAHLQRVATNFGIKFSDMCQTDNSCSLRAR 271          
BLAST of mRNA_P-wetherbeei_contig6584.1.2 vs. uniprot
Match: A0A0G4GWM3_VITBC (VDE domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4GWM3_VITBC)

HSP 1 Score: 234 bits (596), Expect = 2.940e-67
Identity = 127/303 (41.91%), Postives = 166/303 (54.79%), Query Frame = 3
Query:  636 IDYACIASKCGGAVVAAARDQRALHELTCLSSCGIDDIACQMRCGDMYEQDVLRNFHVCAIAEHHCVPQRRDIGRH------------------MLPDPAALP------ATFEPERFSGEWFITHGLNGVFDCFDCQRH---IVRGEPGKMVVDVE------YRVARTAGGSSSLADAVFGAGGXXXXXXXEGAEDAEGTFTRSLRQTFLQDPEHPGVLQAADNGYLHQRDDWFILDADPDSHMLVYYTGCNDAWCGYVGGVVYSRTPQLAAETRSRLVATAAAFGIRFQDMCSTDNSCALHS 1445
            +DY  + +KCGG ++ A  D+R LHE  CL  CG+DDIACQMRCGD+YE+DVL+ FH+CAI+EH  +PQR D  RH                   LP  + +       A  EP    GEW++ +GLN VFDCF CQ H   +V+  PGK    V       + + R   G+ + A+ V             G  D +  FTR + Q F      PGVL++ D  YLHQ DDW+IL ADP+ + +VYY GCNDAWCGY GGVVYSRTP+ +  T   +       G+    MC  DN+C+L S
Sbjct:   31 VDYYGLLTKCGGPLLRAMSDRRGLHEFVCLMKCGMDDIACQMRCGDLYEEDVLKEFHICAISEHQVIPQRID--RHAAEGRVRDDQGKSEQVARQLPGASEVDRRIPVVAALEPAALQGEWWVVYGLNPVFDCFPCQHHTASVVKSAPGKTSEAVRSDDGAPHPIMRWKNGAWTAANGVRFDISYRVPVPHGG--DKQPFFTRHVEQVFFPHRSSPGVLRSHDPTYLHQSDDWYILSADPERYFIVYYMGCNDAWCGYDGGVVYSRTPEPSQATIDDVREALRCAGLSIVSMCPVDNACSLQS 329          
BLAST of mRNA_P-wetherbeei_contig6584.1.2 vs. uniprot
Match: A0A6V2ZBH3_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2ZBH3_HETAK)

HSP 1 Score: 192 bits (487), Expect = 4.680e-51
Identity = 100/266 (37.59%), Postives = 142/266 (53.38%), Query Frame = 3
Query:  639 DYACIASKCGGAVVAAARDQRALHELTCLSSCGIDDIACQMRCGDMYEQDV-LRNFHVCAIAEHHCVPQRRDIGRHMLPDPAALPATFEPERFSGEWFITHGLNGVFDCFDCQRHIVRGEPGKMV-VDVEYRVARTAGGSSSLADAVFGAGGXXXXXXXEGAEDAEGTFTRSLRQTFLQDPEHPGVLQAADNGYLHQRDDWFILDADPDS-HMLVYYTGCNDAWCGYVGGVVYSRTPQLAAETRSRLVATAAAFGIRFQDMCSTDN 1427
            D  C+   C   ++ A    R   E+ CL++CG +D  CQM+C +M+E    L++F  C + +H C+PQR ++G + +P P  L  +F  E + G W+ITHG+N V DCF  Q H   G     V VD+ Y V             VF                    + R + +TF Q  E PG+++A+    LHQ DDW+IL A+ +  +M+VYY GCNDAWCGY GG VYSRTP L+ E +  + A  +A GI F  MC+ D+
Sbjct:  126 DVGCMTKNCATELLEAWNSPRGRKEILCLNTCGPNDTGCQMKCVNMHEDPTALKDFTSCVVGKHRCLPQRNEVGLNWVPPPNTLVQSFNLEDYLGHWYITHGMNQVLDCFPSQEHQWVGITSNTVQVDIAYEVESF--NPRKPVSNVF--------------------YRRDMSETFFQSLESPGLMKASGETDLHQNDDWYILGANKEKGYMIVYYIGCNDAWCGYNGGNVYSRTPALSEEAKKEVEAITSAAGINFNSMCAVDH 369          
BLAST of mRNA_P-wetherbeei_contig6584.1.2 vs. uniprot
Match: A0A314ZVA0_PRUYE (VDE domain-containing protein n=1 Tax=Prunus yedoensis var. nudiflora TaxID=2094558 RepID=A0A314ZVA0_PRUYE)

HSP 1 Score: 191 bits (485), Expect = 6.440e-51
Identity = 102/269 (37.92%), Postives = 143/269 (53.16%), Query Frame = 3
Query:  645 ACIASKCGGAVVAAARDQRALHELTCLSSCGI--DDIACQMRCGDMYEQDVLRNFHVCAIAEHHCVPQRRDIGRHMLPDPAALPATFEPERFSGEWFITHGLNGVFDCFDCQRHIVRGEPGKMVVDVEYRVARTAGGSSSLADAVFGAGGXXXXXXXEGAEDAEGTFTRSLRQTFLQDPEHPGVLQAADNGYLHQRDDWFILDAD----PDSHMLVYYTGCNDAWCGYVGGVVYSRTPQLAAETRSRLVATAAAFGIRFQDMCSTDNSC 1433
            AC+  +C   +     +      + CL +C    D+  CQ++CGD++E  V+  F+ CA++   CVP++ D+G   +PDPA L  +F+ E+F+G+WFIT GLN  FD FDCQ H    E  K+V ++ +R+ RT  G                           G FTRS  Q F+QDP  PG+L   DN YLH +DDW+IL +     PD ++ VYY G NDAW GY G V+Y+R+  L A     L   AA+ G  F     TDN+C
Sbjct:  110 ACLLKECRLELAKCIGNPSCAANIACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPKKSDVGEFPIPDPAVLVKSFDIEKFNGKWFITSGLNPTFDTFDCQLHEFHTESSKLVGNLSWRI-RTPDG---------------------------GFFTRSAVQKFVQDPNQPGILYNHDNDYLHYQDDWYILSSKMENKPDDYIFVYYRGRNDAWDGYGGAVIYTRSSVLPASIVPDLEKAAASVGRDFSKFIRTDNTC 350          
BLAST of mRNA_P-wetherbeei_contig6584.1.2 vs. uniprot
Match: M5W4K8_PRUPE (VDE domain-containing protein n=14 Tax=Prunus TaxID=3754 RepID=M5W4K8_PRUPE)

HSP 1 Score: 192 bits (487), Expect = 4.360e-50
Identity = 102/269 (37.92%), Postives = 143/269 (53.16%), Query Frame = 3
Query:  645 ACIASKCGGAVVAAARDQRALHELTCLSSCGI--DDIACQMRCGDMYEQDVLRNFHVCAIAEHHCVPQRRDIGRHMLPDPAALPATFEPERFSGEWFITHGLNGVFDCFDCQRHIVRGEPGKMVVDVEYRVARTAGGSSSLADAVFGAGGXXXXXXXEGAEDAEGTFTRSLRQTFLQDPEHPGVLQAADNGYLHQRDDWFILDAD----PDSHMLVYYTGCNDAWCGYVGGVVYSRTPQLAAETRSRLVATAAAFGIRFQDMCSTDNSC 1433
            AC+  +C   +     +      + CL +C    D+  CQ++CGD++E  V+  F+ CA++   CVP++ D+G   +PDPA L  +F+ E+F+G+WFIT GLN  FD FDCQ H    E  K+V ++ +R+ RT  G                           G FTRS  Q F+QDP  PG+L   DN YLH +DDW+IL +     PD ++ VYY G NDAW GY G V+Y+R+  L A     L   AA+ G  F     TDN+C
Sbjct:  144 ACLLKECRVELAKCIGNPSCAANIACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPKKSDVGEFPIPDPAVLVKSFDIEKFNGKWFITSGLNPTFDAFDCQLHEFHTESSKLVGNLSWRI-RTPDG---------------------------GFFTRSAVQKFVQDPNQPGILYNHDNDYLHYQDDWYILSSKMENKPDDYIFVYYRGRNDAWDGYGGAVIYTRSSVLPASIVPDLEKAAASVGRDFSKFIRTDNTC 384          
BLAST of mRNA_P-wetherbeei_contig6584.1.2 vs. uniprot
Match: A0A7S2SKA3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SKA3_9STRA)

HSP 1 Score: 186 bits (472), Expect = 2.230e-49
Identity = 117/317 (36.91%), Postives = 160/317 (50.47%), Query Frame = 3
Query:  492 LRHGIVRVAASAAVAAVFAAGWLGGGGVASTMAAFEELREDGVVVERKIDYACIASKCGGAVVAAARDQRALHELTCLSSCG--IDDIACQMRCGDMYEQDVLRNFHVCAIAEHHCVPQRRDIGRHMLPDPAALPATFEPERFSGEWFITHGLNGVFDCFDCQRHIVRG-EPGKMVVDVEYRVARTAGGSSSLADAVFGAGGXXXXXXXEGAEDAEGTFTRSLRQTFLQDPEHPGVLQAADNGYLHQRDDWFILDADPDSHMLVYYTGCNDAWCGYVGGVVYSRTPQLAAETRSRLVATAAAFGIRFQDMCSTDNSC 1433
            + HGI   AA A V +V  A  L  G  AS  A       DG  + +     CI S C   +     + + L  L C+ +C    D+ ACQ+RCGD++E +V+  F+ CA+++  CVPQR+D G   +P  +AL  +F  ++F G W+I+ GLN +FD F CQ H     +PG +   + +R+           D  F                    FTR+  Q F QDP  PGVL   DN YLH +DDW+ILD+D D  +LVYY G NDAW GY G V+Y+R P +      R+ A A   G+ F     TDNSC
Sbjct:    1 MEHGIA--AAKACVVSVAMAAVLSFGAPASVEAL------DGAAIGK-----CILSSCQLELAKCVSNPKCLANLACIQTCNGRPDESACQIRCGDIFENEVVGEFNACAVSQKRCVPQRQDDGTFPVPPESALVRSFNTKQFEGRWYISAGLNPIFDTFPCQVHFFTSPKPGLLYGKLNWRIVEP--------DGEF--------------------FTRNAVQRFKQDPSMPGVLYNHDNEYLHYQDDWYILDSDKD-FVLVYYRGRNDAWDGYGGAVLYTRQPTVPTAIIPRVEAAAERAGLDFSKFVQTDNSC 275          
BLAST of mRNA_P-wetherbeei_contig6584.1.2 vs. uniprot
Match: A0A2V0NNX6_9CHLO (VDE domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NNX6_9CHLO)

HSP 1 Score: 188 bits (478), Expect = 3.580e-49
Identity = 103/268 (38.43%), Postives = 136/268 (50.75%), Query Frame = 3
Query:  648 CIASKCGGAVVAAARDQRALHELTCLSSCG--IDDIACQMRCGDMYEQDVLRNFHVCAIAEHHCVPQRRDIGRHMLPDPAALPATFEPERFSGEWFITHGLNGVFDCFDCQRHIVRG-EPGKMVVDVEYRVARTAGGSSSLADAVFGAGGXXXXXXXEGAEDAEGTFTRSLRQTFLQDPEHPGVLQAADNGYLHQRDDWFILDADPDSHMLVYYTGCNDAWCGYVGGVVYSRTPQLAAETRSRLVATAAAFGIRFQDMCSTDNSCALH 1442
            C+ SKC  A+     D + +  L CL+ C    D+ ACQ+RCGD Y    +  F+ CA++E  CVPQR D     +P  +AL   F+    +G WFIT GLN +FD FDCQ H     EPG M   + +R+++  G                               TRS  Q F+QD   PG+L    N YLH  DDW+I+ + P+S++ VYY G NDAW GY G VVY+R  QL AE    L   AA  G  ++D   TDN+C  H
Sbjct:  105 CLLSKCQTALARCLADGQCVQNLVCLNLCNGAADETACQIRCGDQYGDAAIDTFNSCAVSEQKCVPQRVDENLFPVPPDSALDPEFDLSGLTGRWFITAGLNPLFDIFDCQEHFFANPEPGHMKAQINWRISKPRGDFQ----------------------------TRSTIQNFVQDETRPGILYNHGNEYLHYEDDWYIIASKPESYVFVYYRGNNDAWRGYGGAVVYTRDRQLPAEIIPELKEAAAKVGRDWKDFVVTDNTCGPH 344          
BLAST of mRNA_P-wetherbeei_contig6584.1.2 vs. uniprot
Match: UPI0009E55CCA (violaxanthin de-epoxidase, chloroplastic-like n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E55CCA)

HSP 1 Score: 189 bits (480), Expect = 4.570e-49
Identity = 99/268 (36.94%), Postives = 140/268 (52.24%), Query Frame = 3
Query:  648 CIASKCGGAVVAAARDQRALHELTCLSSCGI--DDIACQMRCGDMYEQDVLRNFHVCAIAEHHCVPQRRDIGRHMLPDPAALPATFEPERFSGEWFITHGLNGVFDCFDCQRHIVRGEPGKMVVDVEYRVARTAGGSSSLADAVFGAGGXXXXXXXEGAEDAEGTFTRSLRQTFLQDPEHPGVLQAADNGYLHQRDDWFILDAD----PDSHMLVYYTGCNDAWCGYVGGVVYSRTPQLAAETRSRLVATAAAFGIRFQDMCSTDNSC 1433
            C+  +C G +V    +      + CL +C    D+  CQ++CGD++E +V+  F+ CA++   CVP + D+G   +P P+AL   F    F+G+W+IT GLN  FD FDCQ H    E GK++ ++ +RV RT  G                           G   RS  Q F+QDP  PG+L   DN YLH +DDW++L +     PD ++ +YY G NDAW GY G VVY+R+PQL A     L   A   G  F    +TDN+C
Sbjct:  146 CLLRECRGELVRCISNPACAANIACLQTCNDRPDETECQIKCGDLFENNVVDEFNECAVSRKKCVPMKGDVGEFPVPSPSALVRNFNMSDFNGKWYITRGLNPTFDTFDCQLHEFHVESGKLIGNISWRV-RTPDG---------------------------GFLARSTLQRFVQDPSQPGILYNHDNEYLHYQDDWYVLSSKVENKPDDYIFIYYRGRNDAWDGYGGAVVYTRSPQLPATIIPELENAAKKVGRDFTKFIATDNTC 385          
BLAST of mRNA_P-wetherbeei_contig6584.1.2 vs. uniprot
Match: A0A7J0GUQ5_9ERIC (Non-photochemical quenching 1 n=1 Tax=Actinidia rufa TaxID=165716 RepID=A0A7J0GUQ5_9ERIC)

HSP 1 Score: 184 bits (468), Expect = 1.060e-48
Identity = 97/269 (36.06%), Postives = 136/269 (50.56%), Query Frame = 3
Query:  645 ACIASKCGGAVVAAARDQRALHELTCLSSCGI--DDIACQMRCGDMYEQDVLRNFHVCAIAEHHCVPQRRDIGRHMLPDPAALPATFEPERFSGEWFITHGLNGVFDCFDCQRHIVRGEPGKMVVDVEYRVARTAGGSSSLADAVFGAGGXXXXXXXEGAEDAEGTFTRSLRQTFLQDPEHPGVLQAADNGYLHQRDDWFILDAD----PDSHMLVYYTGCNDAWCGYVGGVVYSRTPQLAAETRSRLVATAAAFGIRFQDMCSTDNSC 1433
            AC+  +C   +     +      + CL +C    D+  CQ++CGD++E  V+  F+ CA++   CVPQ+ D+G   +PDP  +   F  + FSG+WFIT GLN  FD FDCQ H    E  K+V ++ +R+    GG                              TRS  Q F+QDP HPG+L   DN YLH +DDW+IL +     PD ++ VYY G NDAW GY G VVY+R+  L       L   A + G  F +   T+N+C
Sbjct:   39 ACLLKECRFELAKCIANPSCAANVACLQTCNNRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPQKSDVGDFPVPDPTLIVRNFSIKDFSGKWFITSGLNPTFDTFDCQLHEFHTESNKLVGNISWRIGTPDGGF----------------------------ITRSTVQRFVQDPNHPGILYNHDNEYLHYQDDWYILSSKIENKPDDYIFVYYRGRNDAWDGYGGAVVYTRSAVLPLSIVPELEKAAQSVGRNFNEFIRTNNTC 279          
BLAST of mRNA_P-wetherbeei_contig6584.1.2 vs. uniprot
Match: A0A5D2NFG1_GOSTO (VDE domain-containing protein n=8 Tax=Gossypium TaxID=3633 RepID=A0A5D2NFG1_GOSTO)

HSP 1 Score: 187 bits (476), Expect = 1.450e-48
Identity = 103/268 (38.43%), Postives = 137/268 (51.12%), Query Frame = 3
Query:  648 CIASKCGGAVVAAARDQRALHELTCLSSCGI--DDIACQMRCGDMYEQDVLRNFHVCAIAEHHCVPQRRDIGRHMLPDPAALPATFEPERFSGEWFITHGLNGVFDCFDCQRHIVRGEPGKMVVDVEYRVARTAGGSSSLADAVFGAGGXXXXXXXEGAEDAEGTFTRSLRQTFLQDPEHPGVLQAADNGYLHQRDDWFILDAD----PDSHMLVYYTGCNDAWCGYVGGVVYSRTPQLAAETRSRLVATAAAFGIRFQDMCSTDNSC 1433
            C+  +C   +     +      + CL +C    D+  CQ++CGD++E  V+  F+ CA++   CVPQ+ DIG   +PDPA L   F    F+G+WFI+ GLN  FD FDCQ H    E GK+V ++ +R+ RT  G                           G FTRS  Q FLQDP HPG+L   DN YLH +DDW+I+ +     PD ++ VYY G NDAW GY G VVY+R+  L       L   A   G  F     TDNSC
Sbjct:  140 CLLKECRIELAKCIANPSCAANVACLQTCNDRPDETECQIKCGDLFENSVVDEFNECAVSRKKCVPQKSDIGEFPVPDPAVLVENFNIADFTGKWFISSGLNPTFDTFDCQLHEFHIEGGKLVGNLSWRI-RTPDG---------------------------GFFTRSATQRFLQDPNHPGILYNHDNEYLHYQDDWYIISSKIENKPDDYVFVYYRGRNDAWDGYGGAVVYTRSAVLPETIVPELKRAAQNVGRNFNKFIRTDNSC 379          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6584.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YX71_9STRA6.470e-10458.24Violaxanthin de-epoxidase-domain-containing protei... [more]
A0A0G4GWM3_VITBC2.940e-6741.91VDE domain-containing protein n=1 Tax=Vitrella bra... [more]
A0A6V2ZBH3_HETAK4.680e-5137.59Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A314ZVA0_PRUYE6.440e-5137.92VDE domain-containing protein n=1 Tax=Prunus yedoe... [more]
M5W4K8_PRUPE4.360e-5037.92VDE domain-containing protein n=14 Tax=Prunus TaxI... [more]
A0A7S2SKA3_9STRA2.230e-4936.91Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2V0NNX6_9CHLO3.580e-4938.43VDE domain-containing protein n=1 Tax=Raphidocelis... [more]
UPI0009E55CCA4.570e-4936.94violaxanthin de-epoxidase, chloroplastic-like n=1 ... [more]
A0A7J0GUQ5_9ERIC1.060e-4836.06Non-photochemical quenching 1 n=1 Tax=Actinidia ru... [more]
A0A5D2NFG1_GOSTO1.450e-4838.43VDE domain-containing protein n=8 Tax=Gossypium Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6584contigP-wetherbeei_contig6584:2..2892 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog3760.EMJ08629
Preferred nameVDE
PFAMsVDE
Model size2124
Max annot lvl35493|Streptophyta
KEGG rclassRC01624,RC03037
KEGG koko:K09839
KEGG ReactionR07178,R07179,R10055
KEGG Pathwayko00906,ko01100,ko01110,map00906,map01100,map01110
Hectar predicted targeting categorysignal anchor
GOsGO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006082,GO:0006629,GO:0006631,GO:0006720,GO:0006721,GO:0006725,GO:0006778,GO:0006807,GO:0006950,GO:0008150,GO:0008152,GO:0009266,GO:0009408,GO:0009507,GO:0009534,GO:0009536,GO:0009579,GO:0009628,GO:0009987,GO:0010028,GO:0015994,GO:0016108,GO:0016116,GO:0016122,GO:0016491,GO:0019752,GO:0019904,GO:0031976,GO:0031977,GO:0031984,GO:0032787,GO:0033013,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044255,GO:0044281,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044436,GO:0044444,GO:0044446,GO:0044464,GO:0046422,GO:0046483,GO:0050896,GO:0051186,GO:0055114,GO:0071704,GO:1901360,GO:1901564
Exons3
Evalue8.46e-52
EggNOG OGs28K1H@1|root,2QSFY@2759|Eukaryota,37JQN@33090|Viridiplantae,3GFCZ@35493|Streptophyta,4JJY4@91835|fabids
EC1.23.5.1
DescriptionBelongs to the calycin superfamily. Lipocalin family
Cds size1722
COG categoryS
BRITEko00000,ko00001,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186923.5671897-UTR-P-wetherbeei_contig6584:1..3471683186923.5671897-UTR-P-wetherbeei_contig6584:1..347Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6584 2..347 -
1683186923.6175523-UTR-P-wetherbeei_contig6584:2836..28921683186923.6175523-UTR-P-wetherbeei_contig6584:2836..2892Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6584 2837..2892 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186923.5805435-CDS-P-wetherbeei_contig6584:347..9811683186923.5805435-CDS-P-wetherbeei_contig6584:347..981Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6584 348..981 -
1683186923.591105-CDS-P-wetherbeei_contig6584:1289..16751683186923.591105-CDS-P-wetherbeei_contig6584:1289..1675Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6584 1290..1675 -
1683186923.605398-CDS-P-wetherbeei_contig6584:2134..28361683186923.605398-CDS-P-wetherbeei_contig6584:2134..2836Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6584 2135..2836 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6584.1.2prot_P-wetherbeei_contig6584.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6584 348..2836 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6584.1.2

>prot_P-wetherbeei_contig6584.1.2 ID=prot_P-wetherbeei_contig6584.1.2|Name=mRNA_P-wetherbeei_contig6584.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=574bp
MHHLPRQCSCVRRRAGEDESQRTFILSAPAALPLNRRRRGRRRRIERLCS
VTVIAACVRIGLLLGIGGAFALGVQHHVGVLGVTTPLPDARVPVTTTDGT
GTAWTRGRKRSRATTAPDRPECSVSLNEEQRRPERPEETNRSLGGLRHGI
VRVAASAAVAAVFAAGWLGGGGVASTMAAFEELREDGVVVERKIDYACIA
SKCGGAVVAAARDQRALHELTCLSSCGIDDIACQMRCGDMYEQDVLRNFH
VCAIAEHHCVPQRRDIGRHMLPDPAALPATFEPERFSGEWFITHGLNGVF
DCFDCQRHIVRGEPGKMVVDVEYRVARTAGGSSSLADAVFGAGGGGGTGA
GEGAEDAEGTFTRSLRQTFLQDPEHPGVLQAADNGYLHQRDDWFILDADP
DSHMLVYYTGCNDAWCGYVGGVVYSRTPQLAAETRSRLVATAAAFGIRFQ
DMCSTDNSCALHSRGVGDGAAAAGTDTTSTAAVVVSNAGTCGAAADGEVL
ATPALSALADSFALADSLALVAARTNELGGCAAEVEVAMDGADAALAAEG
TAAEAAGLGAMVIASAPVRSTPI*
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mRNA from alignment at P-wetherbeei_contig6584:2..2892-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6584.1.2 ID=mRNA_P-wetherbeei_contig6584.1.2|Name=mRNA_P-wetherbeei_contig6584.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2891bp|location=Sequence derived from alignment at P-wetherbeei_contig6584:2..2892- (Phaeothamnion wetherbeei SAG_119_79)
TTTCTCCAGTCAAATCTCTGGAGCGCCATTCTAGCGGTTTCGAGCCATCA GCGACAATGCATCATCTACCGCGGCAATGCAGCTGCGTGCGGAGGAGAGC CGGCGAGGACGAATCCCAAAGAACGTTCATTCTCAGCGCTCCTGCAGCCT TACCGTTGAATCGCCGACGACGGGGGCGTCGAAGACGGATCGAGCGGCTC TGTAGTGTCACCGTCATCGCTGCCTGCGTTCGCATCGGGCTGCTGCTTGG CATTGGCGGCGCTTTCGCCCTCGGTGTCCAGCATCATGTAGGAGTGCTAG GCGTTACCACGCCTCTACCAGATGCACGTGTGCCTGTCACGACGACCGAC GGCACTGGGACAGCCTGGACGCGAGGGCGAAAGCGAAGCAGGGCGACGAC CGCTCCCGACAGACCAGAATGCTCAGTGTCGCTGAACGAGGAGCAGCGTC GACCAGAGCGACCCGAGGAAACGAATCGGAGCTTGGGCGGCCTGCGGCAC GGTATCGTCCGTGTGGCCGCGTCGGCTGCCGTTGCCGCGGTGTTCGCCGC CGGCTGGCTCGGCGGCGGTGGCGTCGCATCGACGATGGCAGCATTCGAAG AGCTGCGGGAGGATGGCGTCGTCGTGGAGCGCAAAATCGATTACGCGTGC ATCGCCAGCAAGTGCGGCGGCGCCGTAGTGGCGGCGGCGCGGGACCAGCG CGCGTTGCACGAGCTGACGTGCCTCAGCAGCTGCGGCATCGACGACATTG CCTGCCAGGTCTGTTTTATTTTGTTCTGAAACGGCGTTTTACGCCCGAGT TTGTGTTCCGCTCTCCATTTTGGGAAAAAATCTAATTTGAGTACCTTTAA CCATTGTCGTACGTGTCTTTATGAATTGATGCCATTTTACCTGTATTTGG ATTGACTGGCTCTTTGCGGACTTGAAGTTTTGGCGGCAAAAGATCTGTAT CTCCAGGATTGCATTTGCTCTTATCAAGCGTTTTCAGAGTAGGACTGATA GTCGTTAAAAACTTCCGGCTCTAGTCGTGAACCCTTACAGGCCTCCTGTC TCCATGCATCGAAGGCTTTGACCTGTATATGTACCCTCGTTTGCTATAGA AGCTATATATTTCTCCCTCCCGCCTCCCTCACTACGCAATGCTGTTCTCT TCTCCGTTCCCGCTCTTCCTCCTCCCCTATTGCTGTTGGCGTGGCTGCTT TCTGGCGGCGGCGCCAGATGCGGTGCGGCGACATGTACGAGCAGGATGTC CTCCGCAATTTCCACGTCTGCGCCATCGCCGAGCACCACTGCGTGCCGCA GCGTCGCGACATCGGCCGACACATGCTGCCGGACCCGGCCGCACTGCCGG CAACCTTCGAGCCCGAGCGCTTTTCCGGCGAGTGGTTCATCACGCATGGC CTCAACGGCGTCTTTGACTGTTTCGACTGCCAGCGGCACATCGTGCGCGG CGAGCCCGGCAAGATGGTGGTCGACGTTGAGTACCGCGTGGCTCGGACGG CCGGCGGCAGCAGCAGCCTCGCCGACGCTGTCTTCGGCGCTGGCGGCGGC GGTGGGACGGGAGCAGGAGAAGGCGCCGAAGACGCCGAAGGGACTTTTAC CAGGTGCGTTGGCGTGGTTTTGTTGTGATTGTGTTGCCACGCTCAGTGTC CTGTTGTTCATGAAATTCTATCTCTTCTGTCTTGTCCTCTCGTGCTGCAG CTTAGCGGTTGAAAGATTGGCTCAGGGCAGCTCGCCTTTACAACCTCGTT CCGCTAGCCTCCTGTCTGCAAAAGTTTTGCGCATGAAAATCGAGAGCACG TTGATTCGTCGTTGCTCGAAGCTGCTGCCTGCCTGACCTTTGTGCGCTAC TATCCACGCATTCCGCTGCCGTCGCCCGCCGTTCCTGCCGCAATACCCGT CCGCGCGGCAGGTCCCTCCGGCAGACATTCCTGCAGGACCCGGAGCACCC GGGCGTGCTGCAGGCCGCCGACAACGGCTACCTGCACCAGCGGGACGACT GGTTTATCCTCGATGCCGACCCCGACTCGCACATGCTCGTCTACTACACC GGCTGCAACGACGCCTGGTGCGGCTACGTCGGCGGCGTCGTCTATTCGCG GACGCCGCAGCTGGCGGCGGAGACACGTAGCCGGCTAGTGGCGACGGCCG CCGCCTTCGGCATCCGTTTTCAAGATATGTGTAGTACCGACAATTCATGC GCGCTGCACAGCCGCGGCGTTGGCGACGGTGCCGCTGCGGCAGGCACTGA CACCACTAGCACCGCAGCGGTCGTCGTCAGCAATGCTGGCACCTGTGGCG CTGCCGCTGATGGGGAGGTCTTGGCTACGCCGGCGTTGTCTGCACTGGCC GACTCGTTTGCACTGGCCGACTCGTTGGCATTGGTGGCGGCGCGAACGAA CGAGCTCGGAGGTTGCGCTGCGGAGGTGGAGGTGGCGATGGACGGCGCGG ACGCCGCGCTAGCGGCGGAGGGCACCGCCGCGGAAGCCGCCGGCCTGGGC GCGATGGTGATTGCGTCCGCGCCGGTTCGATCCACGCCGATCTGACAGGG CGCGGCAGCGCGGCGTGTGTTTGTGCTCTCGGTGAACGTCACTTGACAGC AGTTTTGAAGCGGAAGTTGGTGAATGGCGGTCGACTAGTGGGCAGAGCCC TGGACGCACCACGGCGCGCGCAGCAGCTCGCGTGGAGCAGCAATGCGATG CGTGCTTTTGTACAAGGAGGGGACGAGTCGGAGCGAAGAAGGCGGCCGAC AAGAGGCATGGCACGCGGGGCGTACTTATTTATGAAGCAGACCATTGAGG CGACGGAGAGGCTGAGTGAGCCTCACAAGAAAGAAGGGAGATCGGGCGGC AGAGGGAAAAGACGGCGGAAGGGCGGCGCTGGGAGCGGATG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6584:2..2892-

>mRNA_P-wetherbeei_contig6584.1.2 ID=mRNA_P-wetherbeei_contig6584.1.2|Name=mRNA_P-wetherbeei_contig6584.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1722bp|location=Sequence derived from alignment at P-wetherbeei_contig6584:2..2892- (Phaeothamnion wetherbeei SAG_119_79)
ATGCATCATCTACCGCGGCAATGCAGCTGCGTGCGGAGGAGAGCCGGCGA
GGACGAATCCCAAAGAACGTTCATTCTCAGCGCTCCTGCAGCCTTACCGT
TGAATCGCCGACGACGGGGGCGTCGAAGACGGATCGAGCGGCTCTGTAGT
GTCACCGTCATCGCTGCCTGCGTTCGCATCGGGCTGCTGCTTGGCATTGG
CGGCGCTTTCGCCCTCGGTGTCCAGCATCATGTAGGAGTGCTAGGCGTTA
CCACGCCTCTACCAGATGCACGTGTGCCTGTCACGACGACCGACGGCACT
GGGACAGCCTGGACGCGAGGGCGAAAGCGAAGCAGGGCGACGACCGCTCC
CGACAGACCAGAATGCTCAGTGTCGCTGAACGAGGAGCAGCGTCGACCAG
AGCGACCCGAGGAAACGAATCGGAGCTTGGGCGGCCTGCGGCACGGTATC
GTCCGTGTGGCCGCGTCGGCTGCCGTTGCCGCGGTGTTCGCCGCCGGCTG
GCTCGGCGGCGGTGGCGTCGCATCGACGATGGCAGCATTCGAAGAGCTGC
GGGAGGATGGCGTCGTCGTGGAGCGCAAAATCGATTACGCGTGCATCGCC
AGCAAGTGCGGCGGCGCCGTAGTGGCGGCGGCGCGGGACCAGCGCGCGTT
GCACGAGCTGACGTGCCTCAGCAGCTGCGGCATCGACGACATTGCCTGCC
AGATGCGGTGCGGCGACATGTACGAGCAGGATGTCCTCCGCAATTTCCAC
GTCTGCGCCATCGCCGAGCACCACTGCGTGCCGCAGCGTCGCGACATCGG
CCGACACATGCTGCCGGACCCGGCCGCACTGCCGGCAACCTTCGAGCCCG
AGCGCTTTTCCGGCGAGTGGTTCATCACGCATGGCCTCAACGGCGTCTTT
GACTGTTTCGACTGCCAGCGGCACATCGTGCGCGGCGAGCCCGGCAAGAT
GGTGGTCGACGTTGAGTACCGCGTGGCTCGGACGGCCGGCGGCAGCAGCA
GCCTCGCCGACGCTGTCTTCGGCGCTGGCGGCGGCGGTGGGACGGGAGCA
GGAGAAGGCGCCGAAGACGCCGAAGGGACTTTTACCAGGTCCCTCCGGCA
GACATTCCTGCAGGACCCGGAGCACCCGGGCGTGCTGCAGGCCGCCGACA
ACGGCTACCTGCACCAGCGGGACGACTGGTTTATCCTCGATGCCGACCCC
GACTCGCACATGCTCGTCTACTACACCGGCTGCAACGACGCCTGGTGCGG
CTACGTCGGCGGCGTCGTCTATTCGCGGACGCCGCAGCTGGCGGCGGAGA
CACGTAGCCGGCTAGTGGCGACGGCCGCCGCCTTCGGCATCCGTTTTCAA
GATATGTGTAGTACCGACAATTCATGCGCGCTGCACAGCCGCGGCGTTGG
CGACGGTGCCGCTGCGGCAGGCACTGACACCACTAGCACCGCAGCGGTCG
TCGTCAGCAATGCTGGCACCTGTGGCGCTGCCGCTGATGGGGAGGTCTTG
GCTACGCCGGCGTTGTCTGCACTGGCCGACTCGTTTGCACTGGCCGACTC
GTTGGCATTGGTGGCGGCGCGAACGAACGAGCTCGGAGGTTGCGCTGCGG
AGGTGGAGGTGGCGATGGACGGCGCGGACGCCGCGCTAGCGGCGGAGGGC
ACCGCCGCGGAAGCCGCCGGCCTGGGCGCGATGGTGATTGCGTCCGCGCC
GGTTCGATCCACGCCGATCTGA
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