mRNA_P-wetherbeei_contig6560.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6560.3.1
Unique NamemRNA_P-wetherbeei_contig6560.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6560.3.1 vs. uniprot
Match: A0A0S8B1L1_9PROT (Acyl-CoA dehydrogenase n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8B1L1_9PROT)

HSP 1 Score: 692 bits (1787), Expect = 3.350e-250
Identity = 330/398 (82.91%), Postives = 363/398 (91.21%), Query Frame = 1
Query:    1 MDLNYSTEELAFRDEVRGWLAKNLPADLSDKVADHEHLSRDDLVRWHKILAKQGWIAPSWPKDYGGNDWNVVQRYIFEEECGYAGTPPLVPFGLSMCAPVLHKFGTEAQKKRFLPRIYNADDFWCQGYSEPGSGSDLASLKTKADRQGDHYVVNGQKIWTTLGHYADWIFCLVRTDSQASKRQEGISFLLIDMKTPGVTVRPLILMDGGHEVNEVFFEDVKVPVENLVYEENKGWTVAKYLLGHERMNTGRIGVSKRELGRLKDFAAKQMKDGRSLMDDVRFRDKLSKVEIELMALEITNLRFLDQMRRSGQPPGADVSMLKIKGTEIQQSLTELAMQAVGPMAQPFKPVDYA----DGFDAFAASLAPRYANTRKTTIYAGSNEIQRNIISKMSLGL 1182
            MDL+YS EELAFRDEVRGWL  NLP DL  KVA++E LSRDDL+RWH+ILAK+GW+APSWPK++GGN WNVVQRY+FEEECGYAGTPPL+PFGLSMCAPVL KFG+E QKKRFLPRIYN DDFWCQGYSEPGSGSDLASLKTKA RQGDHY+VNGQK WTTL HYADWIFCLVRTDS+++KRQEGISFLL DMKTPG+TVRPL+L+DGGHEVNEVFF+DVKVPVENLVYEE KGWTVAKYLLGHERMNTGRIG SKREL +LK+FAA Q K+GR L++D RFRD+LS+VE+ELMALEITNLRFLDQMRRSG PPGADVSMLKIKGTEIQQSL+EL +QAVGP+AQPF+PVD      D FD F ASLAPRY N RKTTIYAGSNEIQRNIISKM+LGL
Sbjct:    1 MDLSYSPEELAFRDEVRGWLKDNLPEDLRRKVAEYEELSRDDLLRWHRILAKKGWVAPSWPKEWGGNGWNVVQRYLFEEECGYAGTPPLIPFGLSMCAPVLLKFGSEEQKKRFLPRIYNGDDFWCQGYSEPGSGSDLASLKTKAVRQGDHYLVNGQKTWTTLAHYADWIFCLVRTDSESAKRQEGISFLLFDMKTPGITVRPLVLLDGGHEVNEVFFDDVKVPVENLVYEEGKGWTVAKYLLGHERMNTGRIGGSKRELAKLKEFAAAQSKNGRPLIEDARFRDRLSRVEVELMALEITNLRFLDQMRRSGNPPGADVSMLKIKGTEIQQSLSELMLQAVGPLAQPFRPVDAPVAARDDFDPFVASLAPRYGNMRKTTIYAGSNEIQRNIISKMTLGL 398          
BLAST of mRNA_P-wetherbeei_contig6560.3.1 vs. uniprot
Match: UPI0019C0A5DF (Acyl-CoA dehydrogenase family protein n=1 Tax=Candidatus Parcubacteria bacterium TaxID=2762014 RepID=UPI0019C0A5DF)

HSP 1 Score: 663 bits (1711), Expect = 1.310e-238
Identity = 318/399 (79.70%), Postives = 352/399 (88.22%), Query Frame = 1
Query:    1 MDLNYSTEELAFRDEVRGWLAKNLPADLSDKVADHEHLSRDDLVRWHKILAKQGWIAPSWPKDYGGNDWNVVQRYIFEEECGYAGTPPLVPFGLSMCAPVLHKFGTEAQKKRFLPRIYNADDFWCQGYSEPGSGSDLASLKTKADR----QGDHYVVNGQKIWTTLGHYADWIFCLVRTDSQASKRQEGISFLLIDMKTPGVTVRPLILMDGGHEVNEVFFEDVKVPVENLVYEENKGWTVAKYLLGHERMNTGRIGVSKRELGRLKDFAAKQM-KDGRSLMDDVRFRDKLSKVEIELMALEITNLRFLDQMRRSGQPPGADVSMLKIKGTEIQQSLTELAMQAVGPMAQPFKPVDYADGFDAFAASLAPRYANTRKTTIYAGSNEIQRNIISKMSLGL 1182
            MDLNYS EE AFRD++RGWL  NLP DL DK+A++E L R+DL+RWH+ILAKQGW+AP+WPK++GG  WNVVQRYIFEEECG+AGTPPL+PFGLSMC PV+  FGT  QK+RFLP IYN D FWCQGYSEPGSGSDLASLKTKA+R    +GDHYVVNGQKIWTTLGH+ADWIFCLVRTDS  SKRQEGISFLLIDMKTPG+TVRPLILMDGGHEVNEVFF++VKVP ENL+YEE KGWTVAKYLLGHERMNTGRIG SKREL +L +FAAKQ   DG+ L+ D RFRDKL++VE+ELMALEITNLRFLDQMRRSGQPPGADVSMLKIKGTEIQQ+LTEL+M AVGPMAQPF+ V     FD F A LAPRY N RKTTIYAGSNEIQRNIISKM+LGL
Sbjct:    1 MDLNYSQEESAFRDQIRGWLKANLPQDLRDKIANYEELGREDLLRWHRILAKQGWVAPAWPKEFGGTSWNVVQRYIFEEECGFAGTPPLIPFGLSMCGPVILHFGTPEQKQRFLPGIYNGDVFWCQGYSEPGSGSDLASLKTKAERVKDEKGDHYVVNGQKIWTTLGHFADWIFCLVRTDSSLSKRQEGISFLLIDMKTPGITVRPLILMDGGHEVNEVFFDNVKVPAENLIYEEGKGWTVAKYLLGHERMNTGRIGASKRELAKLTEFAAKQPGDDGKPLIQDARFRDKLTRVEVELMALEITNLRFLDQMRRSGQPPGADVSMLKIKGTEIQQALTELSMAAVGPMAQPFRSVADDPDFDEFTAGLAPRYCNFRKTTIYAGSNEIQRNIISKMTLGL 399          
BLAST of mRNA_P-wetherbeei_contig6560.3.1 vs. uniprot
Match: A0A1F4E1N2_9PROT (Pimeloyl-CoA dehydrogenase large subunit n=6 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4E1N2_9PROT)

HSP 1 Score: 656 bits (1693), Expect = 6.220e-236
Identity = 313/395 (79.24%), Postives = 352/395 (89.11%), Query Frame = 1
Query:    1 MDLNYSTEELAFRDEVRGWLAKNLPADLSDKVADHEHLSRDDLVRWHKILAKQGWIAPSWPKDYGGNDWNVVQRYIFEEECGYAGTPPLVPFGLSMCAPVLHKFGTEAQKKRFLPRIYNADDFWCQGYSEPGSGSDLASLKTKADRQGDHYVVNGQKIWTTLGHYADWIFCLVRTDSQASKRQEGISFLLIDMKTPGVTVRPLILMDGGHEVNEVFFEDVKVPVENLVYEENKGWTVAKYLLGHERMNTGRIGVSKRELGRLKDFAAKQM-KDGRSLMDDVRFRDKLSKVEIELMALEITNLRFLDQMRRSGQPPGADVSMLKIKGTEIQQSLTELAMQAVGPMAQPFKPVDYADGFDAFAASLAPRYANTRKTTIYAGSNEIQRNIISKMSLGL 1182
            MDLNYS +EL FRDEVRGWL  NLP DL DKVA++E L+R+DL+ WH+ILA++GW+AP+WP+++GG  WN+VQRYIFEEE GY G+PPL+PFGL+MC PVL +FG EAQKKRFLPRIY  DDFWCQGYSEPGSGSDLASLKTKA R+G+ Y+VNGQKIWTTLG YADWIFCLVRTDS  SK+QEGISFLLIDMK+PG+ VRPLILMDGGHEVNEVFFE+V+VPVENLVYEENKGWTVAKYLLGHERM TGRIG SKREL +LK FAA Q+  DG+ L+ D RFRDKL+++E+ELMALEITNLRFLDQMRR+GQPPGADVSMLKIKGTEIQQSL+ELAMQAVGP+AQPF  V    GFDAF A LAPRY N RKTTIYAGSNEIQRNIISKM+LGL
Sbjct:    1 MDLNYSQDELVFRDEVRGWLNANLPQDLRDKVANNEELNREDLLGWHRILARKGWVAPAWPQEWGGTGWNLVQRYIFEEELGYVGSPPLIPFGLAMCGPVLLRFGNEAQKKRFLPRIYGGDDFWCQGYSEPGSGSDLASLKTKALREGNEYIVNGQKIWTTLGQYADWIFCLVRTDSNMSKKQEGISFLLIDMKSPGIMVRPLILMDGGHEVNEVFFENVRVPVENLVYEENKGWTVAKYLLGHERMGTGRIGASKRELAKLKAFAASQLGDDGKPLVQDSRFRDKLTRIEVELMALEITNLRFLDQMRRTGQPPGADVSMLKIKGTEIQQSLSELAMQAVGPLAQPFMAVGADAGFDAFTAGLAPRYCNFRKTTIYAGSNEIQRNIISKMTLGL 395          
BLAST of mRNA_P-wetherbeei_contig6560.3.1 vs. uniprot
Match: A0A536YU40_9PROT (Pimeloyl-CoA dehydrogenase large subunit n=4 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536YU40_9PROT)

HSP 1 Score: 651 bits (1679), Expect = 7.840e-234
Identity = 309/394 (78.43%), Postives = 349/394 (88.58%), Query Frame = 1
Query:    1 MDLNYSTEELAFRDEVRGWLAKNLPADLSDKVADHEHLSRDDLVRWHKILAKQGWIAPSWPKDYGGNDWNVVQRYIFEEECGYAGTPPLVPFGLSMCAPVLHKFGTEAQKKRFLPRIYNADDFWCQGYSEPGSGSDLASLKTKADRQGDHYVVNGQKIWTTLGHYADWIFCLVRTDSQASKRQEGISFLLIDMKTPGVTVRPLILMDGGHEVNEVFFEDVKVPVENLVYEENKGWTVAKYLLGHERMNTGRIGVSKRELGRLKDFAAKQMKDGRSLMDDVRFRDKLSKVEIELMALEITNLRFLDQMRRSGQPPGADVSMLKIKGTEIQQSLTELAMQAVGPMAQPFKPVDYADGFDAFAASLAPRYANTRKTTIYAGSNEIQRNIISKMSLGL 1182
            MDLNYS EELAFRD++R WL  NLP DL  KVADHE LS+DDL+RWH+ILAK+GW+AP+WP+++GG  WNV QRYIFEEECGY GTPPL+PFGL+MCA VL +FGTEAQKKRFLPRIYN DDFWCQGYSEPGSGSDLASLKTKA R  DHYVVNGQK WTTL HYADWIFCLVRTD+   KRQEGISFLLIDM+TPGV+VRPL LMDG HEVNEVFF+DVKVPVENLV+EE KGWTVAKYLLG+ER++TGRIG SKREL +LK+FA+KQ+KDGR LM+D RFRD++S++E+EL ALEITNLRFLDQ+R  G+ PGA+VS+LKIKGTEIQQ+LTEL MQAVGP+AQPF+P+D A  FD FAA L PRY N RKTTIYAGSNEIQRNIISK  LGL
Sbjct:    1 MDLNYSAEELAFRDQMRAWLDANLPDDLRRKVADHESLSKDDLMRWHRILAKEGWVAPAWPEEWGGTGWNVAQRYIFEEECGYVGTPPLIPFGLTMCAAVLLRFGTEAQKKRFLPRIYNGDDFWCQGYSEPGSGSDLASLKTKAVRHEDHYVVNGQKTWTTLAHYADWIFCLVRTDAHVEKRQEGISFLLIDMETPGVSVRPLALMDGEHEVNEVFFDDVKVPVENLVHEEGKGWTVAKYLLGYERLSTGRIGASKRELAKLKEFASKQLKDGRPLMEDARFRDRVSRLEVELTALEITNLRFLDQLR-GGRVPGAEVSILKIKGTEIQQALTELMMQAVGPLAQPFRPLDGAGDFDEFAAGLTPRYCNFRKTTIYAGSNEIQRNIISKAILGL 393          
BLAST of mRNA_P-wetherbeei_contig6560.3.1 vs. uniprot
Match: A0A3N5I8H1_9BACT (Pimeloyl-CoA dehydrogenase large subunit n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A3N5I8H1_9BACT)

HSP 1 Score: 642 bits (1655), Expect = 3.670e-230
Identity = 303/394 (76.90%), Postives = 346/394 (87.82%), Query Frame = 1
Query:    1 MDLNYSTEELAFRDEVRGWLAKNLPADLSDKVADHEHLSRDDLVRWHKILAKQGWIAPSWPKDYGGNDWNVVQRYIFEEECGYAGTPPLVPFGLSMCAPVLHKFGTEAQKKRFLPRIYNADDFWCQGYSEPGSGSDLASLKTKADRQGDHYVVNGQKIWTTLGHYADWIFCLVRTDSQASKRQEGISFLLIDMKTPGVTVRPLILMDGGHEVNEVFFEDVKVPVENLVYEENKGWTVAKYLLGHERMNTGRIGVSKRELGRLKDFAAKQMKDGRSLMDDVRFRDKLSKVEIELMALEITNLRFLDQMRRSGQPPGADVSMLKIKGTEIQQSLTELAMQAVGPMAQPFKPVDYADGFDAFAASLAPRYANTRKTTIYAGSNEIQRNIISKMSLGL 1182
            MDLNYS EE AFRDEVRGWLA+NLP DL DKV D+  LS+DDL RWHKILA++GW+AP WP ++GG  WNVVQRYIFEEECGYAGTPPLV FGL MCAPVL +FGT+AQK+RFLP+IY+ ++FWCQGYSEPGSGSDLASLKT+A R   HYVV+GQKIWTTL HYADWIFCLVRTD++  KRQEGISFLLIDMKTPG+TVRP+ LMDGGHEVNEVFF++V+VPVENLV+E+ KGWTVAK+LLG+ERM TGRIGVSKREL R+K+ AA   KDG+ L+DD RFRD+LS+VE+ELMALEITNLRFLDQ+RR  +PPGA+VS+LKIKGTEIQQSLTEL MQA GP AQ F+PV+    FD F A+LAPRY N RK TIYAGSNEIQRNIISKM+LGL
Sbjct:    1 MDLNYSPEETAFRDEVRGWLAQNLPPDLRDKVRDYRELSKDDLERWHKILARKGWVAPDWPVEWGGTGWNVVQRYIFEEECGYAGTPPLVAFGLRMCAPVLFRFGTDAQKQRFLPKIYSGEEFWCQGYSEPGSGSDLASLKTRAVRDDGHYVVSGQKIWTTLAHYADWIFCLVRTDAKTDKRQEGISFLLIDMKTPGITVRPIYLMDGGHEVNEVFFDEVRVPVENLVHEDGKGWTVAKHLLGYERMGTGRIGVSKRELLRVKEVAAAARKDGKPLLDDPRFRDRLSRVEVELMALEITNLRFLDQLRRGSKPPGAEVSLLKIKGTEIQQSLTELMMQAAGPFAQAFRPVEADADFDRFTAALAPRYCNLRKATIYAGSNEIQRNIISKMTLGL 394          
BLAST of mRNA_P-wetherbeei_contig6560.3.1 vs. uniprot
Match: A0A536VKM6_9PROT (Pimeloyl-CoA dehydrogenase large subunit n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536VKM6_9PROT)

HSP 1 Score: 640 bits (1652), Expect = 1.010e-229
Identity = 305/394 (77.41%), Postives = 347/394 (88.07%), Query Frame = 1
Query:    1 MDLNYSTEELAFRDEVRGWLAKNLPADLSDKVADHEHLSRDDLVRWHKILAKQGWIAPSWPKDYGGNDWNVVQRYIFEEECGYAGTPPLVPFGLSMCAPVLHKFGTEAQKKRFLPRIYNADDFWCQGYSEPGSGSDLASLKTKADRQGDHYVVNGQKIWTTLGHYADWIFCLVRTDSQASKRQEGISFLLIDMKTPGVTVRPLILMDGGHEVNEVFFEDVKVPVENLVYEENKGWTVAKYLLGHERMNTGRIGVSKRELGRLKDFAAKQMKDGRSLMDDVRFRDKLSKVEIELMALEITNLRFLDQMRRSGQPPGADVSMLKIKGTEIQQSLTELAMQAVGPMAQPFKPVDYADGFDAFAASLAPRYANTRKTTIYAGSNEIQRNIISKMSLGL 1182
            MDLNYS EELAFRDEV GWLA NLPADL DKVA + HLSRDDL+RWH+ILA +GWIAPSWP+++GG  WNVVQRYIF+E CGYAG PPLVPFGL MCAPVL KFGTEAQK+RFLPRIY  ++FWCQGYSEPGSGSDLASL T+A +QGDHYVVNGQK WTTL H ADWIFCLVRT+++  ++Q+GISFLL+DMK+PG+TVRPLILMDGGHEVNEVFF+DV VPVENLV++E KGWTVAKYLLGHERMNT RIG S+REL +L  FAA+Q+ DG+ L +D RFRDKLS+VE+ELMAL ITNLRFLDQ+R  G+ PGA+VSMLKIKGTEIQQ+L EL MQAVGP+AQPF PVD +  FD F ASLAPRY N RKT+IYAGSNEIQRNII+KM+LGL
Sbjct:    1 MDLNYSKEELAFRDEVSGWLADNLPADLRDKVARYAHLSRDDLLRWHQILAARGWIAPSWPQEWGGTGWNVVQRYIFDEACGYAGAPPLVPFGLLMCAPVLLKFGTEAQKQRFLPRIYRGEEFWCQGYSEPGSGSDLASLSTRAVQQGDHYVVNGQKTWTTLAHMADWIFCLVRTEARTERKQDGISFLLVDMKSPGITVRPLILMDGGHEVNEVFFDDVSVPVENLVHDEGKGWTVAKYLLGHERMNTARIGASQRELEKLTAFAAQQLHDGKPLTEDTRFRDKLSRVEVELMALSITNLRFLDQLRE-GRAPGAEVSMLKIKGTEIQQALAELMMQAVGPLAQPFSPVDGSVDFDDFTASLAPRYCNFRKTSIYAGSNEIQRNIIAKMALGL 393          
BLAST of mRNA_P-wetherbeei_contig6560.3.1 vs. uniprot
Match: A0A5C8P5W7_9BURK (Pimeloyl-CoA dehydrogenase large subunit n=2 Tax=Burkholderiaceae TaxID=119060 RepID=A0A5C8P5W7_9BURK)

HSP 1 Score: 637 bits (1643), Expect = 2.290e-228
Identity = 302/394 (76.65%), Postives = 351/394 (89.09%), Query Frame = 1
Query:    1 MDLNYSTEELAFRDEVRGWLAKNLPADLSDKVADHEHLSRDDLVRWHKILAKQGWIAPSWPKDYGGNDWNVVQRYIFEEECGYAGTPPLVPFGLSMCAPVLHKFGTEAQKKRFLPRIYNADDFWCQGYSEPGSGSDLASLKTKADRQGDHYVVNGQKIWTTLGHYADWIFCLVRTDSQASKRQEGISFLLIDMKTPGVTVRPLILMDGGHEVNEVFFEDVKVPVENLVYEENKGWTVAKYLLGHERMNTGRIGVSKRELGRLKDFAAKQMKDGRSLMDDVRFRDKLSKVEIELMALEITNLRFLDQMRRSGQPPGADVSMLKIKGTEIQQSLTELAMQAVGPMAQPFKPVDYADGFDAFAASLAPRYANTRKTTIYAGSNEIQRNIISKMSLGL 1182
            MDLNY+ +ELAFRDEVRGWL  N+P +L +KV ++E LS++DLVRWHKILA++GW+APSWP ++GG DW+ VQRYIFEEE  YAG PP+ PFG +MCA VL KFGTEAQKKRFLPRIY+ DDFWCQGYSEPG+GSDLASLKT+A+R+GDHYVVNGQKIWTTLGHY DWIFCLVRTDS  +K+QEGISFLLIDMKTPG+TVRPLIL+D GHEVNEVFF+DV+VPVENLV+EENKGWTVAKYLLGHER+NTGRIG SKRE+ +LKD AA+  K+GR L++D RFRDK+S+VE+ELMALEITNL+F+D+MRR+GQ  GADVSMLKIKGTEIQQ++TEL MQ  GPMAQ F+PVDY DGFD F  S+A RY N RKT+IYAGSNEIQR II+KMSLGL
Sbjct:    1 MDLNYTADELAFRDEVRGWLQANIPPELREKVLNYEELSKEDLVRWHKILARKGWLAPSWPVEWGGTDWSPVQRYIFEEEYAYAGAPPIAPFGPTMCASVLLKFGTEAQKKRFLPRIYHCDDFWCQGYSEPGAGSDLASLKTRAERRGDHYVVNGQKIWTTLGHYGDWIFCLVRTDSTVAKKQEGISFLLIDMKTPGITVRPLILLDEGHEVNEVFFDDVEVPVENLVFEENKGWTVAKYLLGHERLNTGRIGASKREMLKLKDMAARTTKNGRPLIEDPRFRDKVSRVEVELMALEITNLKFVDEMRRTGQI-GADVSMLKIKGTEIQQAITELLMQVAGPMAQSFRPVDY-DGFDDFMGSIAARYFNFRKTSIYAGSNEIQRGIIAKMSLGL 392          
BLAST of mRNA_P-wetherbeei_contig6560.3.1 vs. uniprot
Match: A0A1D2SJA4_9BURK (Pimeloyl-CoA dehydrogenase large subunit n=5 Tax=Proteobacteria TaxID=1224 RepID=A0A1D2SJA4_9BURK)

HSP 1 Score: 636 bits (1640), Expect = 6.320e-228
Identity = 303/394 (76.90%), Postives = 352/394 (89.34%), Query Frame = 1
Query:    1 MDLNYSTEELAFRDEVRGWLAKNLPADLSDKVADHEHLSRDDLVRWHKILAKQGWIAPSWPKDYGGNDWNVVQRYIFEEECGYAGTPPLVPFGLSMCAPVLHKFGTEAQKKRFLPRIYNADDFWCQGYSEPGSGSDLASLKTKADRQGDHYVVNGQKIWTTLGHYADWIFCLVRTDSQASKRQEGISFLLIDMKTPGVTVRPLILMDGGHEVNEVFFEDVKVPVENLVYEENKGWTVAKYLLGHERMNTGRIGVSKRELGRLKDFAAKQMKDGRSLMDDVRFRDKLSKVEIELMALEITNLRFLDQMRRSGQPPGADVSMLKIKGTEIQQSLTELAMQAVGPMAQPFKPVDYADGFDAFAASLAPRYANTRKTTIYAGSNEIQRNIISKMSLGL 1182
            MDLNYS +ELAFRDEVRGWL  N+PADL DK+ ++  LS+DDLVRWHKILAK+GW+APSWPK++GG DW+ V+RYIFEEE  YAG PP+ PFG +MCA VL +FGTEAQK+ FLPRIY+ DDFWCQGYSEPGSGSDLASLKT+A+R+GDHYVVNGQKIWTTLGHY DWIFCLVRTDS +SK+QEGISFLLIDMKTPG+TVRPLIL+D GHEVNEVFF+DVKVPVENLV+EE KGWTVAKYLLGHER+NTGRIG SKRE+ +LK+ AA+  KDGR L+DD RFRDK+S+VEIELMALEITNLRF+D+MRR+G+  GA+VSMLKIKGTEIQQ++TEL MQ  GP+AQ F+P+DY + FD F AS+APRY N RKT+IYAGSNEIQRNII+K +LGL
Sbjct:    1 MDLNYSADELAFRDEVRGWLDANIPADLRDKMLNYRELSKDDLVRWHKILAKKGWVAPSWPKEWGGTDWSPVERYIFEEEYAYAGAPPIAPFGPTMCASVLLQFGTEAQKQHFLPRIYHCDDFWCQGYSEPGSGSDLASLKTRAERRGDHYVVNGQKIWTTLGHYGDWIFCLVRTDS-SSKKQEGISFLLIDMKTPGITVRPLILLDEGHEVNEVFFDDVKVPVENLVHEEGKGWTVAKYLLGHERLNTGRIGASKREMLKLKEIAARTTKDGRPLLDDPRFRDKVSRVEIELMALEITNLRFVDEMRRTGRI-GAEVSMLKIKGTEIQQAITELLMQVAGPLAQSFRPLDY-ENFDGFTASIAPRYFNFRKTSIYAGSNEIQRNIIAKAALGL 391          
BLAST of mRNA_P-wetherbeei_contig6560.3.1 vs. uniprot
Match: A0A3A0FA95_9BURK (Pimeloyl-CoA dehydrogenase large subunit n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A3A0FA95_9BURK)

HSP 1 Score: 625 bits (1611), Expect = 1.710e-223
Identity = 297/394 (75.38%), Postives = 346/394 (87.82%), Query Frame = 1
Query:    1 MDLNYSTEELAFRDEVRGWLAKNLPADLSDKVADHEHLSRDDLVRWHKILAKQGWIAPSWPKDYGGNDWNVVQRYIFEEECGYAGTPPLVPFGLSMCAPVLHKFGTEAQKKRFLPRIYNADDFWCQGYSEPGSGSDLASLKTKADRQGDHYVVNGQKIWTTLGHYADWIFCLVRTDSQASKRQEGISFLLIDMKTPGVTVRPLILMDGGHEVNEVFFEDVKVPVENLVYEENKGWTVAKYLLGHERMNTGRIGVSKRELGRLKDFAAKQMKDGRSLMDDVRFRDKLSKVEIELMALEITNLRFLDQMRRSGQPPGADVSMLKIKGTEIQQSLTELAMQAVGPMAQPFKPVDYADGFDAFAASLAPRYANTRKTTIYAGSNEIQRNIISKMSLGL 1182
            MDLNYS EE AFRDEVR WL  ++PA L  KV D+E L+RDDLV WH+ILA +GWIAP+WP+++GG DW  VQRY+FEEEC YAG PP+VPFG+SMCAPVL +FGTEAQKKRFLPRIY ADDFWCQGYSEPGSGSDLASLKT+A R+GD YV+NGQKIWTTL H+ADWIFCLVRTDS +S+RQEGISFLL+DMKTPG+TVRPLIL+D GHEVNEVFF+DV+VPVENLV+ EN+GWTVAKYLLGHER+NTGRIG SKREL RLK+ AA   ++G+ L+DD RFRD+LS+VEIELMALEITNLRF+D+MRR+G+  G +VSMLKI+GTEIQQ+LTEL MQA GP AQ F+P+DYA GFD   A++ PRY N RKT+IYAGSNEIQRNII+K +LGL
Sbjct:    1 MDLNYSAEERAFRDEVRAWLDASVPATLRRKVLDYEELTRDDLVGWHRILADRGWIAPAWPREWGGTDWTPVQRYLFEEECAYAGAPPIVPFGVSMCAPVLLQFGTEAQKKRFLPRIYRADDFWCQGYSEPGSGSDLASLKTRAQRRGDRYVLNGQKIWTTLAHFADWIFCLVRTDSSSSRRQEGISFLLVDMKTPGITVRPLILLDEGHEVNEVFFDDVEVPVENLVHRENEGWTVAKYLLGHERLNTGRIGASKRELARLKEVAAATTRNGKPLLDDPRFRDRLSRVEIELMALEITNLRFVDEMRRTGRI-GPEVSMLKIRGTEIQQALTELRMQAAGPFAQMFRPIDYA-GFDEHTAAVTPRYFNFRKTSIYAGSNEIQRNIIAKAALGL 392          
BLAST of mRNA_P-wetherbeei_contig6560.3.1 vs. uniprot
Match: A0A7W1AQX2_9PROT (Acyl-CoA dehydrogenase family protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7W1AQX2_9PROT)

HSP 1 Score: 622 bits (1605), Expect = 1.450e-222
Identity = 296/394 (75.13%), Postives = 337/394 (85.53%), Query Frame = 1
Query:    1 MDLNYSTEELAFRDEVRGWLAKNLPADLSDKVADHEHLSRDDLVRWHKILAKQGWIAPSWPKDYGGNDWNVVQRYIFEEECGYAGTPPLVPFGLSMCAPVLHKFGTEAQKKRFLPRIYNADDFWCQGYSEPGSGSDLASLKTKADRQGDHYVVNGQKIWTTLGHYADWIFCLVRTDSQASKRQEGISFLLIDMKTPGVTVRPLILMDGGHEVNEVFFEDVKVPVENLVYEENKGWTVAKYLLGHERMNTGRIGVSKRELGRLKDFAAKQMKDGRSLMDDVRFRDKLSKVEIELMALEITNLRFLDQMRRSGQPPGADVSMLKIKGTEIQQSLTELAMQAVGPMAQPFKPVDYADGFDAFAASLAPRYANTRKTTIYAGSNEIQRNIISKMSLGL 1182
            MDL YS  ELAFRDEV  WL  NLP DL DKVA + HL++ +L+ WH+ILA +GWIAPSWP ++GG DW VVQRY+FEEECGYAG PPLVPFGL+MCAPVL KFGTEAQK RFL RIY+ +DFWCQGYSEPGSGSDLASLKT A R+ DHYVVNGQK WTT+ H ADWIFCLVRTD+   ++Q+GISFLLIDMKTPG+ VRPL+LMDG HEVNE+FF+DV VP ENLV+EE KGWTVAKYLLGHERMNT RIG S+REL +LKDFAA+QMKDGR L+DD RFRDK+S+VE+ELMAL +TN+RFLDQ+R  G+ PGADVSMLKI GTEIQQ+LTEL MQA GP+A  F P D AD FDAF A+LAPRY N RKT+IYAGSNEIQRNII+K+SLGL
Sbjct:    1 MDLAYSPAELAFRDEVSAWLHDNLPNDLRDKVASYTHLTKAELLHWHRILAAKGWIAPSWPIEWGGTDWTVVQRYLFEEECGYAGAPPLVPFGLAMCAPVLLKFGTEAQKGRFLRRIYHGEDFWCQGYSEPGSGSDLASLKTTAVRRADHYVVNGQKTWTTMAHMADWIFCLVRTDTSTERKQDGISFLLIDMKTPGIIVRPLLLMDGHHEVNEMFFDDVAVPAENLVHEEGKGWTVAKYLLGHERMNTARIGTSRRELAKLKDFAARQMKDGRPLLDDPRFRDKVSRVEVELMALAVTNMRFLDQLR-GGRAPGADVSMLKITGTEIQQALTELMMQAAGPLAAAFAPTDEADDFDAFTAALAPRYCNFRKTSIYAGSNEIQRNIIAKLSLGL 393          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6560.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0S8B1L1_9PROT3.350e-25082.91Acyl-CoA dehydrogenase n=1 Tax=Betaproteobacteria ... [more]
UPI0019C0A5DF1.310e-23879.70Acyl-CoA dehydrogenase family protein n=1 Tax=Cand... [more]
A0A1F4E1N2_9PROT6.220e-23679.24Pimeloyl-CoA dehydrogenase large subunit n=6 Tax=u... [more]
A0A536YU40_9PROT7.840e-23478.43Pimeloyl-CoA dehydrogenase large subunit n=4 Tax=B... [more]
A0A3N5I8H1_9BACT3.670e-23076.90Pimeloyl-CoA dehydrogenase large subunit n=1 Tax=C... [more]
A0A536VKM6_9PROT1.010e-22977.41Pimeloyl-CoA dehydrogenase large subunit n=2 Tax=B... [more]
A0A5C8P5W7_9BURK2.290e-22876.65Pimeloyl-CoA dehydrogenase large subunit n=2 Tax=B... [more]
A0A1D2SJA4_9BURK6.320e-22876.90Pimeloyl-CoA dehydrogenase large subunit n=5 Tax=P... [more]
A0A3A0FA95_9BURK1.710e-22375.38Pimeloyl-CoA dehydrogenase large subunit n=1 Tax=B... [more]
A0A7W1AQX2_9PROT1.450e-22275.13Acyl-CoA dehydrogenase family protein n=1 Tax=Beta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6560contigP-wetherbeei_contig6560:1955..3139 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1095769.CAHF01000011_gene2286
PFAMsAcyl-CoA_dh_1,Acyl-CoA_dh_M,Acyl-CoA_dh_N
Model size1185
Max annot lvl28216|Betaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.51e-178
EggNOG OGsCOG1960@1|root,COG1960@2|Bacteria,1MVJC@1224|Proteobacteria,2VIQT@28216|Betaproteobacteria,473D7@75682|Oxalobacteraceae
DescriptionAcyl-CoA dehydrogenase, middle domain
Cds size1185
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186922.2053475-CDS-P-wetherbeei_contig6560:1954..31391683186922.2053475-CDS-P-wetherbeei_contig6560:1954..3139Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6560 1955..3139 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6560.3.1prot_P-wetherbeei_contig6560.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6560 1955..3139 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6560.3.1

>prot_P-wetherbeei_contig6560.3.1 ID=prot_P-wetherbeei_contig6560.3.1|Name=mRNA_P-wetherbeei_contig6560.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=395bp
MDLNYSTEELAFRDEVRGWLAKNLPADLSDKVADHEHLSRDDLVRWHKIL
AKQGWIAPSWPKDYGGNDWNVVQRYIFEEECGYAGTPPLVPFGLSMCAPV
LHKFGTEAQKKRFLPRIYNADDFWCQGYSEPGSGSDLASLKTKADRQGDH
YVVNGQKIWTTLGHYADWIFCLVRTDSQASKRQEGISFLLIDMKTPGVTV
RPLILMDGGHEVNEVFFEDVKVPVENLVYEENKGWTVAKYLLGHERMNTG
RIGVSKRELGRLKDFAAKQMKDGRSLMDDVRFRDKLSKVEIELMALEITN
LRFLDQMRRSGQPPGADVSMLKIKGTEIQQSLTELAMQAVGPMAQPFKPV
DYADGFDAFAASLAPRYANTRKTTIYAGSNEIQRNIISKMSLGL*
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mRNA from alignment at P-wetherbeei_contig6560:1955..3139+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6560.3.1 ID=mRNA_P-wetherbeei_contig6560.3.1|Name=mRNA_P-wetherbeei_contig6560.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1185bp|location=Sequence derived from alignment at P-wetherbeei_contig6560:1955..3139+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGATCTCAACTACTCGACCGAAGAGCTCGCGTTCCGCGACGAAGTGCG CGGCTGGCTCGCCAAGAACCTTCCCGCCGACCTGTCCGACAAGGTCGCCG ACCACGAGCACCTGTCCAGGGACGACCTCGTGCGCTGGCACAAGATCCTC GCCAAGCAGGGCTGGATCGCGCCTTCGTGGCCCAAGGACTACGGCGGCAA CGACTGGAACGTCGTGCAGCGCTATATCTTCGAGGAAGAGTGCGGCTACG CCGGCACGCCGCCGCTGGTGCCGTTCGGCCTGTCGATGTGCGCGCCGGTG CTGCACAAGTTCGGCACCGAGGCGCAGAAGAAGCGCTTCCTGCCGCGCAT CTACAACGCGGACGACTTCTGGTGCCAGGGCTACTCGGAGCCGGGTTCGG GTTCGGATCTCGCCTCGCTGAAGACGAAAGCCGACCGGCAGGGCGACCAC TACGTCGTCAACGGCCAGAAGATCTGGACCACGCTCGGCCACTACGCCGA CTGGATCTTCTGCCTCGTGCGTACCGACTCGCAGGCCTCCAAGCGCCAGG AAGGCATCTCGTTCCTCCTGATCGACATGAAGACGCCGGGCGTCACCGTG CGGCCGCTGATCCTGATGGACGGCGGGCACGAGGTGAACGAGGTGTTCTT CGAGGACGTGAAGGTCCCCGTCGAGAACCTGGTGTACGAGGAGAACAAGG GCTGGACGGTCGCCAAGTACCTGCTGGGCCACGAGCGCATGAACACCGGC CGCATCGGCGTGTCCAAGCGCGAGCTCGGCCGGCTGAAGGACTTCGCCGC GAAGCAGATGAAGGACGGCCGCTCGCTGATGGACGACGTGCGTTTCCGCG ACAAGCTCTCGAAGGTCGAGATCGAGCTGATGGCGCTCGAGATCACCAAC CTGCGGTTCCTCGACCAGATGCGCCGCAGCGGCCAGCCGCCCGGCGCGGA CGTGTCGATGCTGAAGATCAAGGGCACCGAGATCCAGCAGTCGCTCACCG AGCTCGCGATGCAGGCGGTGGGCCCGATGGCGCAGCCTTTCAAGCCGGTG GACTACGCGGACGGGTTCGACGCGTTCGCCGCGTCGCTGGCGCCGCGCTA CGCGAACACCCGCAAGACCACCATCTACGCCGGTTCGAACGAAATCCAGC GCAACATCATCTCCAAGATGTCGCTGGGCCTGTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6560:1955..3139+

>mRNA_P-wetherbeei_contig6560.3.1 ID=mRNA_P-wetherbeei_contig6560.3.1|Name=mRNA_P-wetherbeei_contig6560.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1185bp|location=Sequence derived from alignment at P-wetherbeei_contig6560:1955..3139+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGATCTCAACTACTCGACCGAAGAGCTCGCGTTCCGCGACGAAGTGCG
CGGCTGGCTCGCCAAGAACCTTCCCGCCGACCTGTCCGACAAGGTCGCCG
ACCACGAGCACCTGTCCAGGGACGACCTCGTGCGCTGGCACAAGATCCTC
GCCAAGCAGGGCTGGATCGCGCCTTCGTGGCCCAAGGACTACGGCGGCAA
CGACTGGAACGTCGTGCAGCGCTATATCTTCGAGGAAGAGTGCGGCTACG
CCGGCACGCCGCCGCTGGTGCCGTTCGGCCTGTCGATGTGCGCGCCGGTG
CTGCACAAGTTCGGCACCGAGGCGCAGAAGAAGCGCTTCCTGCCGCGCAT
CTACAACGCGGACGACTTCTGGTGCCAGGGCTACTCGGAGCCGGGTTCGG
GTTCGGATCTCGCCTCGCTGAAGACGAAAGCCGACCGGCAGGGCGACCAC
TACGTCGTCAACGGCCAGAAGATCTGGACCACGCTCGGCCACTACGCCGA
CTGGATCTTCTGCCTCGTGCGTACCGACTCGCAGGCCTCCAAGCGCCAGG
AAGGCATCTCGTTCCTCCTGATCGACATGAAGACGCCGGGCGTCACCGTG
CGGCCGCTGATCCTGATGGACGGCGGGCACGAGGTGAACGAGGTGTTCTT
CGAGGACGTGAAGGTCCCCGTCGAGAACCTGGTGTACGAGGAGAACAAGG
GCTGGACGGTCGCCAAGTACCTGCTGGGCCACGAGCGCATGAACACCGGC
CGCATCGGCGTGTCCAAGCGCGAGCTCGGCCGGCTGAAGGACTTCGCCGC
GAAGCAGATGAAGGACGGCCGCTCGCTGATGGACGACGTGCGTTTCCGCG
ACAAGCTCTCGAAGGTCGAGATCGAGCTGATGGCGCTCGAGATCACCAAC
CTGCGGTTCCTCGACCAGATGCGCCGCAGCGGCCAGCCGCCCGGCGCGGA
CGTGTCGATGCTGAAGATCAAGGGCACCGAGATCCAGCAGTCGCTCACCG
AGCTCGCGATGCAGGCGGTGGGCCCGATGGCGCAGCCTTTCAAGCCGGTG
GACTACGCGGACGGGTTCGACGCGTTCGCCGCGTCGCTGGCGCCGCGCTA
CGCGAACACCCGCAAGACCACCATCTACGCCGGTTCGAACGAAATCCAGC
GCAACATCATCTCCAAGATGTCGCTGGGCCTGTAA
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