mRNA_P-wetherbeei_contig12746.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig12746.1.1 vs. uniprot
Match: A0A836CC14_9STRA (FYVE-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC14_9STRA) HSP 1 Score: 197 bits (501), Expect = 5.140e-61 Identity = 84/150 (56.00%), Postives = 114/150 (76.00%), Query Frame = 1
Query: 1 YATEAEARQSCQAYAPPKWSEGTSPCCSVCRGHYGLLTRRRHHCRNCGRYVCSNCSDRQWPAAMLPFTYMADKNDRKARVCDTCHVSMEDFRSALLRGDEVAARTLYSRGCINLRCPYTIYDNELPLHCAAKSGSIPLLSWLLEDRHCPM 450
Y T A ++C+A+A PK + + C++C+ ++G+L+RRRHHCRNCGR VC C+ WP++MLPFTY A K +RK R+CDTC + E FR+ALL GD+ AAR Y RGC+NLRCPY+IY N LP+HCAA+ GS+ LL+WLLE++HCP+
Sbjct: 13 YETPDAAEEACKAFAVPK--KQNAALCALCKSYFGMLSRRRHHCRNCGRAVCDACAKTSWPSSMLPFTYSAAKQERKCRICDTCAETNEAFRAALLAGDDAAARAAYRRGCVNLRCPYSIYLNGLPVHCAAEGGSMALLAWLLEEKHCPL 160
BLAST of mRNA_P-wetherbeei_contig12746.1.1 vs. uniprot
Match: D8LDM9_ECTSI (FYVE-type domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDM9_ECTSI) HSP 1 Score: 178 bits (451), Expect = 1.090e-53 Identity = 76/151 (50.33%), Postives = 106/151 (70.20%), Query Frame = 1
Query: 1 YATEAEARQSCQAYAPPKWSE-GTSPCCSVCRGHYGLLTRRRHHCRNCGRYVCSNCSDRQWPAAMLPFTYMADKNDRKARVCDTCHVSMEDFRSALLRGDEVAARTLYSRGCINLRCPYTIYDNELPLHCAAKSGSIPLLSWLLEDRHCPM 450
Y T E +++ ++++PP W E G C+VC +G + +RRHHCRNCGR VCS C++R WP +MLP TY D +++K RVC +C+ + EDFR A L G E A +S GC+NLR PYTIY NELP+HCAA G++ +L+WL++DR CP+
Sbjct: 31 YDTAYEGQRAAESFSPPLWQEPGKDSRCAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRSMLPPTYNVDTSEKKVRVCSSCYGAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPL 181
BLAST of mRNA_P-wetherbeei_contig12746.1.1 vs. uniprot
Match: A0A6H5KTC5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTC5_9PHAE) HSP 1 Score: 182 bits (462), Expect = 2.780e-51 Identity = 78/151 (51.66%), Postives = 107/151 (70.86%), Query Frame = 1
Query: 1 YATEAEARQSCQAYAPPKWSE-GTSPCCSVCRGHYGLLTRRRHHCRNCGRYVCSNCSDRQWPAAMLPFTYMADKNDRKARVCDTCHVSMEDFRSALLRGDEVAARTLYSRGCINLRCPYTIYDNELPLHCAAKSGSIPLLSWLLEDRHCPM 450
Y T E +++ ++++PP W E G C+VC +G + +RRHHCRNCGR VCS C++R WP +MLP TY D +++K RVC TC+V+ EDFR A L G E A +S GC+NLR PYTIY NELP+HCAA G++ +L+WL++DR CP+
Sbjct: 355 YDTAYEGQRAAESFSPPLWQEPGKDSRCAVCDSTFGYVLKRRHHCRNCGRLVCSACAERFWPRSMLPPTYNVDTSEKKVRVCSTCYVAGEDFRKACLSGSEEGAMAAFSTGCVNLRVPYTIYHNELPVHCAASGGNLNILAWLVDDRCCPL 505
BLAST of mRNA_P-wetherbeei_contig12746.1.1 vs. uniprot
Match: D7FYF4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYF4_ECTSI) HSP 1 Score: 149 bits (377), Expect = 5.330e-39 Identity = 71/152 (46.71%), Postives = 98/152 (64.47%), Query Frame = 1
Query: 1 YATEAEARQSCQAYAPPKWSEGT-SPCCSVCRGHYG-LLTRRRHHCRNCGRYVCSNCSDRQWPAAMLPFTYMADKNDRKARVCDTCHVSMEDFRSALLRGDEVAARTLYSRGCINLRCPYTIYDNELPLHCAAKSGSIPLLSWLLEDRHCPM 450
+AT EA ++ +A++ P W E T + C+ C+ + +L RRRHHCRNCGR VC+ C+ R WP MLP +Y +R+ RVC TC+ + FR ALLRG A + GC+NLR P++ D ELP+HCAA G++ L+ WLLEDR CP+
Sbjct: 494 FATSYEADRAAEAFSSPVWHEPTPNSTCAECQSVFRPVLQRRRHHCRNCGRLVCTTCALRFWPKHMLPHSYRTSSTERRVRVCRTCYSVGKAFRRALLRGSYQGAMEAHGTGCVNLRAPFS--DRELPVHCAAAGGNVSLMMWLLEDRCCPI 643
BLAST of mRNA_P-wetherbeei_contig12746.1.1 vs. uniprot
Match: A0A6H5KUU5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUU5_9PHAE) HSP 1 Score: 147 bits (372), Expect = 2.600e-38 Identity = 68/152 (44.74%), Postives = 96/152 (63.16%), Query Frame = 1
Query: 1 YATEAEARQSCQAYAPPKWSEGT-SPCCSVCRGHYG-LLTRRRHHCRNCGRYVCSNCSDRQWPAAMLPFTYMADKNDRKARVCDTCHVSMEDFRSALLRGDEVAARTLYSRGCINLRCPYTIYDNELPLHCAAKSGSIPLLSWLLEDRHCPM 450
+AT EA ++ + ++ P W E T + C+ C+ + + RR+HHCRNCGR VC+ C+ R WP MLP +Y +R+ RVC TC+ + FR ALLRG A Y GC+NLR P++ D ELP+HCAA G++ L+ WL+EDR CP+
Sbjct: 564 FATSYEADRAAETFSSPVWHEPTPNSTCAECQSSFRPVFQRRKHHCRNCGRLVCTTCAWRFWPKHMLPHSYRTSSTERRVRVCRTCYSVGKSFRRALLRGSYQGAMEAYGTGCVNLRAPFS--DRELPVHCAAAGGNVSLMMWLVEDRCCPI 713
BLAST of mRNA_P-wetherbeei_contig12746.1.1 vs. uniprot
Match: A0A482RTU5_9ARCH (FYVE-type domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RTU5_9ARCH) HSP 1 Score: 129 bits (325), Expect = 5.900e-33 Identity = 66/142 (46.48%), Postives = 85/142 (59.86%), Query Frame = 1
Query: 31 CQAYAPPKWS-EGTSPCCSVCRGHYGLLTRRRHHCRNCGRYVCSNCSDRQWPAAMLPFTYMADKNDRKARVCDTCHVSMEDFRSALLRGDEVAARTLYSRGCINLRCPYTIYDN-ELPLHCAAKSGSIPLLSWLLEDRHCPM 450
C + APP W + S C +CR + + R+ HHCRNCG VC +CSDR WPA MLP TY ++ RVC CH+ +E F AL RGD A +LYS G INL P T++ + P+H A GS+PLL WLLE + C +
Sbjct: 217 CVSAAPPLWRPKQASLTCVLCRTGFSMF-RKPHHCRNCGHIVCPDCSDRLWPAGMLPSTY--HDQEKVVRVCYACHLLLEHFVLALKRGDLDEALSLYSSGNINLHQPLTVFQHWAYPVHLACSGGSLPLLQWLLEVKRCSL 355
BLAST of mRNA_P-wetherbeei_contig12746.1.1 vs. uniprot
Match: A0A7S3HL29_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HL29_9STRA) HSP 1 Score: 119 bits (299), Expect = 1.420e-28 Identity = 65/152 (42.76%), Postives = 88/152 (57.89%), Query Frame = 1
Query: 16 EARQSCQA----YAPPKWSEGTSP-CCSVCRGHYGLLTRRRHHCRNCGRYVCSNCSDRQWPAAMLPFTYMADKNDRKARVCDTCHVSMEDFRSALLRG--DEVAARTLYSRGCINLRCPYTIY-DNELPLHCAAKSGSIPLLSWLLEDRHCP 447
E++ C+A YAPP ++ C VC + + H C NCG+ VC++CSD WP +MLP TY ++K KARVC C+ ME +AL G DEV A L+ G +N P T+Y D P+HCAA SG++ LL WL+E +HCP
Sbjct: 152 ESKAQCEAITAAYAPPVMADSKKKTACKVCEEAFNKYLKPEH-CHNCGQMVCADCSDESWPRSMLPHTYFSEKKG-KARVCSACNQLMEKLVTALKAGNMDEVIA--LHEIGNVNFHFPLTVYPDAPYPIHCAAGSGNVGLLEWLVEKQHCP 299
BLAST of mRNA_P-wetherbeei_contig12746.1.1 vs. uniprot
Match: F0W4B7_9STRA (Uncharacterized protein AlNc14C16G1788 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W4B7_9STRA) HSP 1 Score: 65.1 bits (157), Expect = 2.040e-9 Identity = 35/81 (43.21%), Postives = 47/81 (58.02%), Query Frame = 1
Query: 46 PPKWSEGTSPCCSVCRGHYG-LLTRRRHHCRNCGRYVCSNCSDRQWPAAMLPFTYMADKNDRKARVCDTCHVSMEDFRSAL 285
PP ++ T C CR G LLTR RHHCRNCG CSNCS + ++PF K ++ RVCD+C+ +++F S L
Sbjct: 149 PPPFANMTF--CDNCREDIGTLLTRGRHHCRNCGGSFCSNCSSKM---IVVPFQVFLSKGEQ--RVCDSCYYRIKEFHSQL 222
BLAST of mRNA_P-wetherbeei_contig12746.1.1 vs. uniprot
Match: A0A662X7B6_9STRA (FYVE-type domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X7B6_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 5.780e-9 Identity = 35/89 (39.33%), Postives = 44/89 (49.44%), Query Frame = 1
Query: 46 PPKW-SEGTSPCCSVCRGHYGLLTRRRHHCRNCGRYVCSNCSDRQWPAAMLPFTYM-------ADKNDRKARVCDTCH-VSMEDFRSAL 285
PP W + P C C +G L RRHHCR CGR +CS CS+ A LPF A+K +RVC TC+ + ME A+
Sbjct: 264 PPVWVPDNARPTCMECHKKFGSLGTRRHHCRMCGRVLCSACSNCHIRAKKLPFPARRRGKKNKAEKGSTNSRVCTTCYEICMEGGMQAV 352
BLAST of mRNA_P-wetherbeei_contig12746.1.1 vs. uniprot
Match: A0A662XEQ0_9STRA (FYVE-type domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XEQ0_9STRA) HSP 1 Score: 63.5 bits (153), Expect = 6.510e-9 Identity = 35/89 (39.33%), Postives = 44/89 (49.44%), Query Frame = 1
Query: 46 PPKW-SEGTSPCCSVCRGHYGLLTRRRHHCRNCGRYVCSNCSDRQWPAAMLPFTYM-------ADKNDRKARVCDTCH-VSMEDFRSAL 285
PP W + P C C +G L RRHHCR CGR +CS CS+ A LPF A+K +RVC TC+ + ME A+
Sbjct: 382 PPVWVPDNARPTCMECHKKFGSLGTRRHHCRMCGRVLCSACSNCHIRAKKLPFPARRRGKKNKAEKGSTNSRVCTTCYEICMEGGMQAV 470 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig12746.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig12746.1.1 >prot_P-wetherbeei_contig12746.1.1 ID=prot_P-wetherbeei_contig12746.1.1|Name=mRNA_P-wetherbeei_contig12746.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=150bp YATEAEARQSCQAYAPPKWSEGTSPCCSVCRGHYGLLTRRRHHCRNCGRYback to top mRNA from alignment at P-wetherbeei_contig12746:254..1359+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig12746.1.1 ID=mRNA_P-wetherbeei_contig12746.1.1|Name=mRNA_P-wetherbeei_contig12746.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1106bp|location=Sequence derived from alignment at P-wetherbeei_contig12746:254..1359+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig12746:254..1359+ >mRNA_P-wetherbeei_contig12746.1.1 ID=mRNA_P-wetherbeei_contig12746.1.1|Name=mRNA_P-wetherbeei_contig12746.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=450bp|location=Sequence derived from alignment at P-wetherbeei_contig12746:254..1359+ (Phaeothamnion wetherbeei SAG_119_79)back to top |