mRNA_P-wetherbeei_contig655.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig655.1.2 vs. uniprot
Match: A0A835ZBL5_9STRA (Signal peptidase complex subunit 2 (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZBL5_9STRA) HSP 1 Score: 175 bits (443), Expect = 4.450e-50 Identity = 94/196 (47.96%), Postives = 123/196 (62.76%), Query Frame = 1
Query: 73 EPMKVETGDNLKVKQAMDEAVIRAALDCGYEEDHFWSNFKLILMAAGCAFALCAQFYPMPFPQSRPLLAGCCVSYFVCSGLLQLVMSFFEQDTIMFTKATRGQGKGLRLRTSFPRFQDIFTVII-------------IEQD---------------KSPGALTT---TLEVGVGSFFDQDGYFDEVGFCDRVAEKL 567
EP KV+TGD+LKVKQAMDEAV+RA +D G+EEDH WSN KL+LM CAFA AQ YP PFP+SRP+LA CC+SYF CS LLQ+VMS EQD I+ TK +G LR+RT+FPRFQ+I+T I ++ + K PG T +++ VG++FD +GY E G + +A+ +
Sbjct: 52 EPSKVDTGDSLKVKQAMDEAVVRAVMDMGFEEDHKWSNVKLLLMVVACAFAGLAQLYPKPFPESRPVLAVCCISYFACSALLQVVMSCIEQDVILITKPNN-KGVALRIRTAFPRFQEIYTTEIEVLAGAASKHATKLQLELMPLITSFLPISIGRKQPGDAATKDGAVKMNVGNYFDVEGYXXEEGVVEDMAKAV 246
BLAST of mRNA_P-wetherbeei_contig655.1.2 vs. uniprot
Match: K8YV93_NANGC (Signal peptidase complex subunit 2 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YV93_NANGC) HSP 1 Score: 170 bits (430), Expect = 9.600e-49 Identity = 82/175 (46.86%), Postives = 118/175 (67.43%), Query Frame = 1
Query: 73 EPMKVETGDNLKVKQAMDEAVIRAALDCGYEEDHFWSNFKLILMAAGCAFALCAQFYPMPFPQSRPLLAGCCVSYFVCSGLLQLVMSFFEQDTIMFTKATRGQGKG---LRLRTSFPRFQDIFTVIIIEQDKSPGALTTTLEVGVGSFFDQDGYFDEVGFCDRVAEKLKEHEQRV 588
EP+ ++TGD +KVKQ +DEAV++A +D GYEE+ F+ N KL LM C FAL AQFYPMPFP+SRPLL CC++YF+ S ++QL++S+ EQDTI+ T+ R GK L++RT FPRFQD +TV + E+ T + + +G FD++G F E G V L +++++
Sbjct: 17 EPLHIDTGDQMKVKQVLDEAVVKAIVDAGYEENFFYDNIKLALMVIACVFALIAQFYPMPFPESRPLLGVCCLAYFLASTIIQLIVSYVEQDTILTTQPLRSGGKAGEALKVRTQFPRFQDEYTVFV-EEAGMQDPPTVSSKFSIGKVFDEEGNFYEEGLAREVQRLLDRYKKQM 190
BLAST of mRNA_P-wetherbeei_contig655.1.2 vs. uniprot
Match: A0A6H5K7Y7_9PHAE (Signal peptidase complex subunit 2 n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K7Y7_9PHAE) HSP 1 Score: 167 bits (422), Expect = 1.030e-47 Identity = 84/173 (48.55%), Postives = 117/173 (67.63%), Query Frame = 1
Query: 76 PMKVETGDNLKVKQAMDEAVIRAALDCGYEEDHFWSNFKLILMAAGCAFALCAQFYPMPFPQSRPLLAGCCVSYFVCSGLLQLVMSFFEQDTIMFTK--ATRGQGKGLRLRTSFPRFQDIFTVIIIEQDKSPGALTTTLEVGVGSFFDQDGYFDEVGFCDRVAEKLKEHEQRV 588
P VETGD +K+KQ MD+AVI+A L+ GYEEDH +N KL +MA C FA+ AQF+P PFP+SR LLA CC SYF CS L L+++++E+D I+ TK ++R GKG+ +RT FPRF +I+TV + +++ PG+ + VG +FD +G FDE G D V + E+R
Sbjct: 9 PQSVETGDTVKMKQIMDDAVIKAVLEMGYEEDHTLNNAKLAVMALACVFAVTAQFWPQPFPESRALLAVCCFSYFTCSFGLHLIVTYWEKDLILATKRSSSRSLGKGIFVRTDFPRFDEIYTVSV--EERKPGSKPIEEQWHVGKYFDYEGNFDEWGMGDAVKNLVTRLEKRA 179
BLAST of mRNA_P-wetherbeei_contig655.1.2 vs. uniprot
Match: A0A7S3M684_9STRA (Signal peptidase complex subunit 2 n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3M684_9STRA) HSP 1 Score: 164 bits (415), Expect = 1.760e-46 Identity = 77/172 (44.77%), Postives = 115/172 (66.86%), Query Frame = 1
Query: 40 DEAEXXXXXXXEPMKVETGDNLKVKQAMDEAVIRAALDCGYEEDHFWSNFKLILMAAGCAFALCAQFYPMPFPQSRPLLAGCCVSYFVCSGLLQLVMSFFEQDTIMFTKATRGQGKGLRLRTSFPRFQDIFTVIIIEQDKSPGALTTTLEVGVGSFFDQDGYFDEVGFCDRV 555
+E E EP +ETGD++KVKQ +D+A I+A + GY+ ++ W N KL+LMA C FA+ AQF+P+PFP SRPLLA CC +YF+ S +LQ +++F ++DTI+F K ++ + +RTSFPRFQ+ FT +I++ +P TT ++ VG +F + G FDE F + V
Sbjct: 19 EEVEVEMVEEKEPFTIETGDSVKVKQVLDDAAIKAITEGGYDANYSWDNMKLLLMALSCVFAMVAQFFPIPFPASRPLLAVCCAAYFIISSVLQYIITFVDKDTILFVKPSKECAHDMEIRTSFPRFQEYFT-LIVQFKGNPNDKKTTAKMYVGRYFTEKGAFDEDAFINDV 189
BLAST of mRNA_P-wetherbeei_contig655.1.2 vs. uniprot
Match: A0A7S2GQY7_9STRA (Signal peptidase complex subunit 2 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GQY7_9STRA) HSP 1 Score: 162 bits (410), Expect = 1.050e-45 Identity = 87/192 (45.31%), Postives = 123/192 (64.06%), Query Frame = 1
Query: 10 KAAAVAPAREDEAEXXXXXXXE--PMKVETGDNLKVKQAMDEAVIRAALDCGYEEDHFWSNFKLILMAAGCAFALCAQFYPMPFPQSRPLLAGCCVSYFVCSGLLQLVMSFFEQDTIMFTKATRGQGKGLRLRTSFPRFQDIFTVIIIEQDKSPGALTTTLEVGVGSFFDQDGYFDEVGFCDRVAEKLKEHE 579
KA+A+A ++D A E P + E GD +KVKQ +DEAV++A D Y E+++W N KL+LM CAFA+ AQF+PM FP SRPLL CC +YFV S +LQL++++ EQD IM T+A GLR+RT FPRF F +I+ Q P + T+T + V +F +DG+FDE F + VA+ +++ E
Sbjct: 19 KASALAAEKDDTANADADEVDERQPFQCEIGDFVKVKQTLDEAVVKAVQDLDYNENYYWDNVKLLLMVIACAFAMVAQFFPMEFPGSRPLLGVCCAAYFVASSVLQLIVTYIEQDCIMTTEAKGPATAGLRIRTDFPRFSYDFQLIV--QRNLPESPTSTTILKVFKYFTEDGWFDEDSFEEDVAKAVRKFE 208
BLAST of mRNA_P-wetherbeei_contig655.1.2 vs. uniprot
Match: A0A7S2CUY6_9STRA (Signal peptidase complex subunit 2 n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CUY6_9STRA) HSP 1 Score: 161 bits (407), Expect = 4.860e-45 Identity = 85/187 (45.45%), Postives = 119/187 (63.64%), Query Frame = 1
Query: 73 EPMKVETGDNLKVKQAMDEAVIRAALDCG-----------YEEDHFWSNFKLILMAAGCAFALCAQFYPMPFPQSRPLLAGCCVSYFVCSGLLQLVMSFFEQDTIMFTKATRGQG---KGLRLRTSFPRFQDIFTVII--IEQDKSPGALTTTLEVGVGSFFDQDGYFDEVGFCDRVAEKLKEHEQR 585
EPM+VE GD +KVKQ +DE+ + A L G Y+E+H+W N KL+LM CAFA+ AQFYPMPFP+SRPLL CC +YFV S +LQ ++++ EQDTIM T A Q +GLR+RT+FPRFQ +TV++ E P T L + +F +DG+FD GF + V +++++ E +
Sbjct: 41 EPMQVEIGDFVKVKQMLDESTVSAVLTLGALKVEDGYTYDYDENHYWDNVKLLLMVVACAFAMVAQFYPMPFPESRPLLGICCAAYFVASTVLQGIVTYIEQDTIMLTHAKNRQTAEKEGLRIRTTFPRFQYDYTVVVEKAETKNGPSVSQTYL---ITKYFTEDGWFDAEGFEEDVTKQVQKFEAK 224
BLAST of mRNA_P-wetherbeei_contig655.1.2 vs. uniprot
Match: W7TQC5_9STRA (Signal peptidase complex subunit 2 n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TQC5_9STRA) HSP 1 Score: 157 bits (397), Expect = 1.710e-44 Identity = 72/129 (55.81%), Postives = 97/129 (75.19%), Query Frame = 1
Query: 73 EPMKVETGDNLKVKQAMDEAVIRAALDCGYEEDHFWSNFKLILMAAGCAFALCAQFYPMPFPQSRPLLAGCCVSYFVCSGLLQLVMSFFEQDTIMFTKATRGQGKG---LRLRTSFPRFQDIFTVIIIE 450
EP+ ++TGD +KVKQ +DEAV++A +D GYEE+ F+ N KL LM C FAL AQFYPMPFP+SRPLL CC++YF+ S ++QL++S+ EQDTI+ T+ R GK L++RT FPRFQD +TV + E
Sbjct: 17 EPLHIDTGDQMKVKQVLDEAVVKAIVDAGYEENFFYDNIKLALMVIACVFALIAQFYPMPFPESRPLLGVCCLAYFLASTIIQLIVSYVEQDTILTTQPLRSGGKAGEALKVRTQFPRFQDEYTVFVEE 145
BLAST of mRNA_P-wetherbeei_contig655.1.2 vs. uniprot
Match: A0A8J2SMV2_9STRA (Signal peptidase complex subunit 2 n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SMV2_9STRA) HSP 1 Score: 155 bits (391), Expect = 3.290e-43 Identity = 81/167 (48.50%), Postives = 109/167 (65.27%), Query Frame = 1
Query: 85 VETGDNLKVKQAMDEAVIRAALDCGYEEDHFWSNFKLILMAAGCAFALCAQFYPMPFPQSRPLLAGCCVSYFVCSGLLQLVMSFFEQDTIMFTKATRGQGKGLRLRTSFPRFQDIFTVIIIEQDKSPGALTTTLEVGVGSFFDQDGYFDEVGFCDRVAEKLKEHEQR 585
++TGD+LKVKQ +DEA ++A L GY+E HF N K+ LM C FA AQF P+PFP+ RP+L CC YFV SG+ QLV+ + E+D ++ TK + GLR+RT FP+FQD+FT II+E D +P A + VG FFD GYF E GF D V + + + E +
Sbjct: 20 IDTGDSLKVKQILDEATVKAVLAKGYDEVHFIDNLKISLMIIACLFACAAQFNPIPFPKVRPILGVCCGGYFVFSGIHQLVVKYVERDIVLITKPKNAE-HGLRVRTDFPKFQDLFT-IIVEYD-TPDAPPYEEKHCVGKFFDTGGYFWEAGFADTVQKMVAKFESK 183
BLAST of mRNA_P-wetherbeei_contig655.1.2 vs. uniprot
Match: A0A7S2GM61_9STRA (Signal peptidase complex subunit 2 n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GM61_9STRA) HSP 1 Score: 148 bits (373), Expect = 2.840e-40 Identity = 74/172 (43.02%), Postives = 112/172 (65.12%), Query Frame = 1
Query: 73 EPMKVETGDNLKVKQAMDEAVIRAALDCGYEEDHFWSNFKLILMAAGCAFALCAQFYPMPFPQSRPLLAGCCVSYFVCSGLLQLVMSFFEQDTIMFTKATRG---QGKGLRLRTSFPRFQDIFTVIIIEQDKSPGALTTTLEVGVGSFFDQDGYFDEVGFCDRVAEKLKEHE 579
+P++ E GD +KVKQ +DEAV++A Y E+++W N K++LM CAFA+ AQF+PM FPQSRPLL CC +YFV S +LQL+ ++ E+D IM T+ G GLR+R++F RFQ + +I+ Q P + +T + + +F +DG+FDE F VA+ +++ E
Sbjct: 31 QPLQCEVGDFIKVKQTLDEAVVKAIQGIDYNENYYWDNVKILLMVVACAFAMVAQFFPMEFPQSRPLLGVCCAAYFVASSILQLIDTYIEKDCIMTTEPKAGVDAASSGLRIRSNFARFQYEYELIV--QKNLPESPASTSILLIYKYFTEDGWFDEDSFEADVAKAVRKFE 200
BLAST of mRNA_P-wetherbeei_contig655.1.2 vs. uniprot
Match: A0A7S1BQM1_9STRA (Signal peptidase complex subunit 2 n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BQM1_9STRA) HSP 1 Score: 144 bits (362), Expect = 4.090e-38 Identity = 72/161 (44.72%), Postives = 104/161 (64.60%), Query Frame = 1
Query: 73 EPMKVETGDNLKVKQAMDEAVIRAALDCGYEEDHFWSNFKLILMAAGCAFALCAQFYPMPFPQSRPLLAGCCVSYFVCSGLLQLVMSFFEQDTIMFTKATRGQGKGLRLRTSFPRFQDIFTVIIIEQDKSPGALTTTLEVGVGSFFDQDGYFDEVGFCDRV 555
E ++V+TGD +KVKQ +DEA + A D G EDH W N KL +M C FA+ AQF P+PFP+SRPLLA +YF+ SG+LQ+++S+ + D IM T G+ GLR+RT+ R+ + + V+ IE D + + T VG FFD++G+FDE + + V
Sbjct: 66 ELIQVDTGDVVKVKQVLDEATVLAIHDAGIAEDHRWGNIKLAVMTVACLFAMVAQFAPVPFPESRPLLACXXXAYFLMSGVLQILISYVDADAIMVTLPPEGKESGLRIRTNQGRYDEHY-VMAIEFDGMKDSPSVTQTWSVGKFFDENGFFDEYSYMEEV 225 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig655.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig655.1.2 >prot_P-wetherbeei_contig655.1.2 ID=prot_P-wetherbeei_contig655.1.2|Name=mRNA_P-wetherbeei_contig655.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=188bp MKVETGDNLKVKQAMDEAVIRAALDCGYEEDHFWSNFKLILMAAGCAFALback to top mRNA from alignment at P-wetherbeei_contig655:2460..4589- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig655.1.2 ID=mRNA_P-wetherbeei_contig655.1.2|Name=mRNA_P-wetherbeei_contig655.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2130bp|location=Sequence derived from alignment at P-wetherbeei_contig655:2460..4589- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig655:2460..4589- >mRNA_P-wetherbeei_contig655.1.2 ID=mRNA_P-wetherbeei_contig655.1.2|Name=mRNA_P-wetherbeei_contig655.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=564bp|location=Sequence derived from alignment at P-wetherbeei_contig655:2460..4589- (Phaeothamnion wetherbeei SAG_119_79)back to top |