mRNA_P-wetherbeei_contig6547.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6547.1.1 vs. uniprot
Match: A0A835YJC5_9STRA (RNA methyltransferase, TrmA family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJC5_9STRA) HSP 1 Score: 226 bits (575), Expect = 1.470e-65 Identity = 133/277 (48.01%), Postives = 166/277 (59.93%), Query Frame = 1
Query: 325 PFKYLQELEGRVESLTNLGDGVLRVD-----GWVVLVPLVAPGERVRVAIHSTYKNHSEATLLEVLERSLDRVEPECPLYGACGGCQYQHLSLEAQRRWKRQQVIDCLERIGGLKGVVVQPTAGTKHAYGYRSKITPHFDRP--SPDGTVHAIGFRRTKFPSPFYGEQVATASAG-IIDVPRCEIARPAINDALPAVRTAALEAMRRRARGVAAXXXXXXXXXXXXXXXXNVTPAATTAQKLMGATLLLREVEEGVVTDHNAQV-RNLSIPSFRWSA 1128
PF+YLQELE R+ESLTNLGDGV RV GWVV+V V PGE V+ ++ + N+SEATL EVLE S DRV P+C L+G CGGCQYQH+++ AQR WKRQQV+D LERIGGL+GV V G++HAYGYRSKITPH++ P G V +IGF+R FP+ F+ + T I+DVP+C IA A R R R AA A K GATLLLR V+EGVV D+ V +S +F+++A
Sbjct: 15 PFEYLQELELRIESLTNLGDGVARVTVDGVAGWVVMVGRVVPGELVKAKVYRNHNNYSEATLTEVLEPSPDRVTPQCALFGMCGGCQYQHMAVGAQREWKRQQVVDVLERIGGLRGVAVNAAVGSEHAYGYRSKITPHYEAPLRKAPGDVRSIGFQRLPFPTLFHDIDIETVDTQKILDVPQCPIA-----------------AARARVRDAAAAAFA----------------AGRARFKSKGATLLLRHVKEGVVYDNKELVTEEVSGLTFKFTA 258
BLAST of mRNA_P-wetherbeei_contig6547.1.1 vs. uniprot
Match: D7G7Q0_ECTSI (RNA methyltransferase, TrmA family n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7Q0_ECTSI) HSP 1 Score: 223 bits (568), Expect = 9.740e-64 Identity = 125/267 (46.82%), Postives = 159/267 (59.55%), Query Frame = 1
Query: 304 PPRFRDKPFKYLQELEGRVESLTNLGDGVLRVD--GWVVLVPLVAPGERVRVAIHSTYKNHSEATLLEVLERSLDRVEPECPLYGACGGCQYQHLSLEAQRRWKRQQVIDCLERIGGLKGVVVQPTAGTKHAYGYRSKITPHFDRPSPDGTVHAIGFRRTKFPSPFYGEQVATASAG-IIDVPRCEIARPAINDALPAVRTAALEAMRRRARGVAAXXXXXXXXXXXXXXXXNVTPAATTAQKLMGATLLLREV-EEGVVTDHNAQV 1092
PP+F P++YL+EL R+ESLTNLG+G+ R GWVV+VP V PGE V+ + + N+SEATL+ V E S DRVEP CPL+G CGGCQYQH+S+ QR WK QQV+DCL RIGG+ V+ T GT YGYRSK+TPH+D P G V IGF++ KFP+ ++G + + ++DV RC +A IN++LP R A E R AA GATLL RE EEG VTD+NA V
Sbjct: 85 PPKFTPTPYEYLEELTVRIESLTNLGEGIAREGETGWVVMVPHVIPGELVKCKVFRNHANYSEATLVSVEEPSPDRVEPNCPLFGMCGGCQYQHMSVSMQRDWKNQQVMDCLTRIGGMVDPAVKDTFGTDETYGYRSKLTPHYDAPY-QGRVREIGFKKVKFPTIYHGVDLGNVNPSKVVDVERCPLATEGINESLPPARQEARE------RVQAAFDSGDGKRVGKR-----------------GATLLFRETTEEGTVTDNNAHV 327
BLAST of mRNA_P-wetherbeei_contig6547.1.1 vs. uniprot
Match: A0A7X1B3B5_9BACT (Class I SAM-dependent RNA methyltransferase n=2 Tax=Puniceicoccus vermicola TaxID=388746 RepID=A0A7X1B3B5_9BACT) HSP 1 Score: 204 bits (518), Expect = 1.510e-57 Identity = 120/263 (45.63%), Postives = 144/263 (54.75%), Query Frame = 1
Query: 304 PPRFRDKPFKYLQELEGRVESLTNLGDGVLRVDGWVVLVPLVAPGERVRVAIHSTYKNHSEATLLEVLERSLDRVEPECPLYGACGGCQYQHLSLEAQRRWKRQQVIDCLERIGGLKGVVVQPTAGTKHAYGYRSKITPHFDRPSPDGTVHAIGFRRTKFPSPFYGEQVATASAGIIDVPRCEIARPAINDALPAVRTAALEAMRRRARGVAAXXXXXXXXXXXXXXXXNVTPAATTAQKLMGATLLLREVEEGVVTDHNAQV 1092
P F +PF+Y QELE VESLTNLG GV R DGWV+++P PGE++R + N SEA L+EVLE S +RV+P+CPL+G+CGGCQYQ LS AQ WK+ QV D LERIGG++ V+ P K YGYRSKITPH+ R DG IGF R IIDVP+C IA PAIN+ LP +R V +K GATLLLRE EGV+TD A V
Sbjct: 4 PKNFIPEPFEYHQELELSVESLTNLGVGVARQDGWVIMIPFSLPGEKIRARVFRNRPNFSEADLIEVLEASPNRVDPKCPLFGSCGGCQYQQLSYPAQLEWKQAQVRDALERIGGIENEVLMPIGSPKE-YGYRSKITPHYQRWRDDGDF-PIGFLRV------------AQRQRIIDVPQCPIATPAINETLPELRA-------------------------------QVKKTPPKGKKKKGATLLLRETMEGVITDAKALV 221
BLAST of mRNA_P-wetherbeei_contig6547.1.1 vs. uniprot
Match: W7TEN0_9STRA (Rna family n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TEN0_9STRA) HSP 1 Score: 206 bits (525), Expect = 5.080e-57 Identity = 125/284 (44.01%), Postives = 153/284 (53.87%), Query Frame = 1
Query: 325 PFKYLQELEGRVESLTNLGDGVLRV----------------------------DGWVVLVPLVAPGERVRVAIHSTYKNHSEATLLEVLERSLDRVEPECPLYGACGGCQYQHLSLEAQRRWKRQQVIDCLERIGGLKGVVVQPTAGTKHAYGYRSKITPHFDRPSPDGTVHAIGFRRTKFPSPFYGEQVATASAGIIDVPRCEIARPAINDALPAVRTAALEAMRRRARGVAAXXXXXXXXXXXXXXXXNVTPAATTAQKLMGATLLLREVEEGVVTDHNAQV 1092
PF Y +ELE VESLTNLG G+ R +GWVV+VP V PGER+R+ I+ +KN+SEA L+ VLE S +RVEP CPL+G CGGCQYQH+S+ AQR WKR+ V+ L R G + GV VQ T GT+H GYRSKITPH ++P G + IGF + S ++DVP C IA PAIN L +R E +R AR A A T +K GATLLLRE EGVVTD A+V
Sbjct: 114 PFAYHEELELTVESLTNLGWGICRASLPSVPDAQSPEMPLPTPSTPGGPRESPEGWVVMVPGVIPGERIRLRIYRNHKNYSEADLMHVLESSPERVEPACPLFGTCGGCQYQHMSVAAQRAWKREHVLQVLARTGNVTGVAVQETIGTEHTLGYRSKITPHHEKPR-GGEIREIGFLKL-------------GSRALVDVPECAIATPAINARLRGLR----EEVRVTARAAAV---------------------AETPRKPKGATLLLRETREGVVTDPRAEV 358
BLAST of mRNA_P-wetherbeei_contig6547.1.1 vs. uniprot
Match: A0A4Q2YFF9_9BACT (Class I SAM-dependent RNA methyltransferase n=1 Tax=Verrucomicrobiaceae bacterium TaxID=2026800 RepID=A0A4Q2YFF9_9BACT) HSP 1 Score: 196 bits (499), Expect = 1.150e-54 Identity = 116/263 (44.11%), Postives = 148/263 (56.27%), Query Frame = 1
Query: 298 RPPPRFRDKPFKYLQELEGRVESLTNLGDGVLRVDGWVVLVPLVAPGERVRVAIHSTYKNHSEATLLEVLERSLDRVEPECPLYGACGGCQYQHLSLEAQRRWKRQQVIDCLERIGGLKGVVVQPTAGTKHAYGYRSKITPHFDRPSPDGTVHAIGFRRTKFPSPFYGEQVATASAGIIDVPRCEIARPAINDALPAVRTAALEAMRRRARGVAAXXXXXXXXXXXXXXXXNVTPAATTAQKLMGATLLLREVEEGVVTDHNA 1086
RPP +F PF + QE+E + +LTN+G G+ RVDGWVV+V PGERVR + KN SEA L+EVL S DR P CP++G CGGCQYQ+L+ AQ +WKR+QV + L + ++ V+ P G+ YGYRSKITPHF+ P G + IGF R A ++DVPRCEIA PAINDALP +R A +R+R +A GATLLLR+ EGV+TD NA
Sbjct: 8 RPPRKFVPTPFFWHQEIELEIVTLTNMGQGLGRVDGWVVMVAFALPGERVRARVFRNDKNFSEADLVEVLTPSPDRAIPLCPIFGNCGGCQYQNLTYAAQLQWKRRQVAELLRHMAKIEQEVL-PVIGSPKEYGYRSKITPHFELPREGGPIREIGFLR------------AGRRYELVDVPRCEIATPAINDALPEIRNA----VRKR-----------------------------SASYKKGATLLLRDTLEGVMTDSNA 224
BLAST of mRNA_P-wetherbeei_contig6547.1.1 vs. uniprot
Match: A0A842HHT9_9BACT (Class I SAM-dependent RNA methyltransferase n=1 Tax=Ruficoccus amylovorans TaxID=1804625 RepID=A0A842HHT9_9BACT) HSP 1 Score: 196 bits (499), Expect = 1.180e-54 Identity = 115/263 (43.73%), Postives = 151/263 (57.41%), Query Frame = 1
Query: 304 PPRFRDKPFKYLQELEGRVESLTNLGDGVLRVDGWVVLVPLVAPGERVRVAIHSTYKNHSEATLLEVLERSLDRVEPECPLYGACGGCQYQHLSLEAQRRWKRQQVIDCLERIGGLKGVVVQPTAGTKHAYGYRSKITPHFDRPSPDGTVHAIGFRRTKFPSPFYGEQVATASAGIIDVPRCEIARPAINDALPAVRTAALEAMRRRARGVAAXXXXXXXXXXXXXXXXNVTPAATTAQKLMGATLLLREVEEGVVTDHNAQV 1092
P F+ +PF Y +ELE RV++LTNLG G+ RV+GWVV+VP PGERVRV ++ +K HS+A LLE++E S +RV+P CPL+G CGGCQYQH+S AQR WKRQQV + L R+ G+ V PT G+ Y YRSK+TPH+ +P A +R + P F + I+DVP C IA AIN+ALP R + +R R +A+ G TLLLR +GV TD+NA V
Sbjct: 7 PKNFKPEPFAYHEELELRVDTLTNLGSGLGRVNGWVVMVPFALPGERVRVRVYRNHKQHSDADLLEIIEPSPERVDPLCPLFGTCGGCQYQHMSYAAQREWKRQQVSELLVRLAGITHPV-NPTHGSPREYHYRSKLTPHYPKPFKPKPGEAATPKR-EMPIGFLHQGQRNR---IVDVPACPIATEAINEALPTER----KRIRER-----------------------------SAKLKKGGTLLLRHTLDGVTTDNNASV 231
BLAST of mRNA_P-wetherbeei_contig6547.1.1 vs. uniprot
Match: A0A2A2QDI8_9BACT (SAM-dependent methyltransferase n=1 Tax=Verrucomicrobiae bacterium Tous-C4TDCM TaxID=1982332 RepID=A0A2A2QDI8_9BACT) HSP 1 Score: 194 bits (493), Expect = 7.000e-54 Identity = 121/265 (45.66%), Postives = 151/265 (56.98%), Query Frame = 1
Query: 298 RPPPRFRDKPFKYLQELEGRVESLTNLGDGVLRVDGWVVLVPLVAPGERVRVAIHSTYKNHSEATLLEVLERSLDRVEPECPLYGACGGCQYQHLSLEAQRRWKRQQVIDCLERIGGLKGVVVQPTAGTKHAYGYRSKITPHFDRPSPDGTVHAIGFRRTKFPSPFYGEQVATASAGIIDVPRCEIARPAINDALPAVRTAALEAMRRRARGVAAXXXXXXXXXXXXXXXXNVTPAATTAQKLMGATLLLREVEEGVVTDHNAQV 1092
RPP +F PF Y QE+E R+++L+NLG G+ RVDGWVV VP PGE V+ + KN S+A L+EVLE S DRVEP CPL+G CGGCQYQHLS EAQ WK +QV + L+ + G++ V+P + + YRSKITPHFDRP DG + IGF P+ G + +GIIDVPRC IA IN ALP R E+ R+RA+ GATLLLR E V T+H+A V
Sbjct: 3 RPPKKFHPHPFAYHQEIELRIDALSNLGIGIGRVDGWVVFVPFCLPGELVKARVFRNDKNCSQADLVEVLEPSPDRVEPGCPLFGTCGGCQYQHLSYEAQLAWKTRQVGELLQHMAGIE-FPVEPCIPSPQLWNYRSKITPHFDRPK-DGVIGEIGF----LPN---GRR-----SGIIDVPRCPIAMAEINAALPRER----ESARQRAK-----------------------------MYKKGATLLLRATEGRVETNHHAVV 220
BLAST of mRNA_P-wetherbeei_contig6547.1.1 vs. uniprot
Match: A0A8J3DDD4_9BACT (23S rRNA (Uracil-5-)-methyltransferase RumA n=2 Tax=Cerasicoccus arenae TaxID=424488 RepID=A0A8J3DDD4_9BACT) HSP 1 Score: 193 bits (490), Expect = 2.020e-53 Identity = 115/263 (43.73%), Postives = 145/263 (55.13%), Query Frame = 1
Query: 304 PPRFRDKPFKYLQELEGRVESLTNLGDGVLRVDGWVVLVPLVAPGERVRVAIHSTYKNHSEATLLEVLERSLDRVEPECPLYGACGGCQYQHLSLEAQRRWKRQQVIDCLERIGGLKGVVVQPTAGTKHAYGYRSKITPHFDRPSPDGTVHAIGFRRTKFPSPFYGEQVATASAGIIDVPRCEIARPAINDALPAVRTAALEAMRRRARGVAAXXXXXXXXXXXXXXXXNVTPAATTAQKLMGATLLLREVEEGVVTDHNAQV 1092
P F +P+ Y ELE VE+LTNLG G+ R + WVV+VP PGERVR + +KN+S+A L++VLE S RVEP CPL+G CGGCQYQHL Q+ WKR QV+D +ERIGGL+ VVV+P G+ Y YRSK+TPH P+ IGF R YG + IIDVP+C IA AIN+ALP R + A + + + G+TLLLR EGV+TD A V
Sbjct: 8 PRNFNPEPYPYHHELELIVETLTNLGHGLARDNNWVVMVPFALPGERVRARVFRNHKNYSDADLVDVLEPSPQRVEPPCPLFGQCGGCQYQHLDYTGQKEWKRGQVVDLMERIGGLENVVVEPVHGSPKEYHYRSKLTPH--HPNRQSKDFPIGFLR-------YGRRNQ-----IIDVPQCPIATDAINEALPIERKK-IHAKKEKFK--------------------------------RGSTLLLRHTLEGVITDPRATV 223
BLAST of mRNA_P-wetherbeei_contig6547.1.1 vs. uniprot
Match: A0A3E1E5Z2_9BACT (23S rRNA (Uracil1939-C5)-methyltransferase/tRNA (Uracil-5-)-methyltransferase n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A3E1E5Z2_9BACT) HSP 1 Score: 193 bits (490), Expect = 2.630e-53 Identity = 99/199 (49.75%), Postives = 130/199 (65.33%), Query Frame = 1
Query: 298 RPPPRFRDKPFKYLQELEGRVESLTNLGDGVLRVDGWVVLVPLVAPGERVRVAIHSTYKNHSEATLLEVLERSLDRVEPECPLYGACGGCQYQHLSLEAQRRWKRQQVIDCLERIGGLKGVVVQPTAGTKHAYGYRSKITPHFDRPSPDGTVHAIGFRRTKFPSPFYGEQVATASAGIIDVPRCEIARPAINDALPAVR 894
RPP RF +PF Y Q++E RV++LTNLG GV R+DGWVV++P PGERVR ++ +KN+SEA L+EVLE S DR+ P CPL+ CGGCQYQ+L+ E Q WKR+QV L R+ G++ V P + YGYRSKITPHF +P DG V IGF + G++ ++DVP+C IA +N AL +VR
Sbjct: 10 RPPKRFLAEPFSYHQQIELRVDNLTNLGLGVGRIDGWVVMIPFALPGERVRARVYRNHKNYSEADLIEVLEPSPDRIFPVCPLFTTCGGCQYQNLTYERQLEWKREQVGSLLHRLAGIQDATVDPVIPSPLRYGYRSKITPHFQQPR-DGQVGPIGFLQA-------GQRFK-----LVDVPQCPIASAPLNQALASVR 195
BLAST of mRNA_P-wetherbeei_contig6547.1.1 vs. uniprot
Match: A0A6N2CI78_9BACT (Class I SAM-dependent RNA methyltransferase n=1 Tax=Puniceicoccaceae bacterium TaxID=2026784 RepID=A0A6N2CI78_9BACT) HSP 1 Score: 191 bits (485), Expect = 1.090e-52 Identity = 121/258 (46.90%), Postives = 149/258 (57.75%), Query Frame = 1
Query: 304 PPRFRDKPFKYLQELEGRVESLTNLGDGVLRVDGWVVLVPLVAPGERVRVAIHSTYKNHSEATLLEVLERSLDRVEPECPLYGACGGCQYQHLSLEAQRRWKRQQVIDCLERIGGLKGVVVQPTAGTKHAYGYRSKITPHFDRPSPDGTVHAIGFRRTKFPSPFYGEQVATASAGIIDVPRCEIARPAINDALPAVRTAALEAMRRRARGVAAXXXXXXXXXXXXXXXXNVTPAATTAQKLMGATLLLREVEEGVVTD 1077
P F +PF+Y QE+E VESLTNLG GV RVDGWVV+VP V PGERVRV I ++N+S+A LLEVLE S DRV PECPLY CGGCQYQHL+ Q + K + V + ++++GG++ V + G+ Y YRSKITPH+DRP DG+ IGF + YG + IIDV +C IA AIN ALP R A RRA G ++ G TLL+R V EGVVTD
Sbjct: 6 PKNFVAEPFEYHQEIEFTVESLTNLGMGVGRVDGWVVMVPFVIPGERVRVRIFRNFQNYSDADLLEVLEASPDRVAPECPLYTRCGGCQYQHLNYARQLKEKTRHVEELMQKLGGIQHPV-ELAHGSPEIYQYRSKITPHYDRPDRDGS-QPIGFLQ-------YGRRNQ-----IIDVEQCPIATQAINAALPEARAEA-----RRAGG--------------------------KKRRQRGGTLLMRGVLEGVVTD 218 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6547.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6547.1.1 >prot_P-wetherbeei_contig6547.1.1 ID=prot_P-wetherbeei_contig6547.1.1|Name=mRNA_P-wetherbeei_contig6547.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=367bp MLTSPASAGAQVATIIAGGRSLESKVTTIVSQRNLRVSVLRQRRRTMVLCback to top mRNA from alignment at P-wetherbeei_contig6547:2..2183- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6547.1.1 ID=mRNA_P-wetherbeei_contig6547.1.1|Name=mRNA_P-wetherbeei_contig6547.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2182bp|location=Sequence derived from alignment at P-wetherbeei_contig6547:2..2183- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6547:2..2183- >mRNA_P-wetherbeei_contig6547.1.1 ID=mRNA_P-wetherbeei_contig6547.1.1|Name=mRNA_P-wetherbeei_contig6547.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1101bp|location=Sequence derived from alignment at P-wetherbeei_contig6547:2..2183- (Phaeothamnion wetherbeei SAG_119_79)back to top |