prot_P-wetherbeei_contig6530.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6530.2.1
Unique Nameprot_P-wetherbeei_contig6530.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length203
Homology
BLAST of mRNA_P-wetherbeei_contig6530.2.1 vs. uniprot
Match: UPI0010567D1E (integrator complex subunit 6 isoform X4 n=4 Tax=Euteleosteomorpha TaxID=1489388 RepID=UPI0010567D1E)

HSP 1 Score: 91.7 bits (226), Expect = 2.670e-19
Identity = 67/199 (33.67%), Postives = 99/199 (49.75%), Query Frame = 0
Query:    2 VLVFCVDTDATMSSRTTAGITLLDLAKSAIEHATN------ATRNEQHLLVTTADGSDGLKVTWGNSVASFDWQFKTLTTAAVAGNSDGGXXXXXXRGIGGGIAAGLAHAFTLLHQRRLLTGVDHWGRGFAPWLSEPAAVILLTGAAELAGNGGEGDGGSGEDAIAALTAAVAARCGVAATALCEQPWRWDHRLFVLVL 194
            VL+F +DT A+M+ RT  GIT LD+AK AIE          A+R ++++LV   D   G+K  W  S A+F  + + L    +                   I   L  AF LL+  RL+TG+D++G+G  P+  EPA +I +T   +L  +GG  D     +    LT  +        + L ++P+RWD RLF LVL
Sbjct:    3 VLLFLIDTSASMNQRTHLGITYLDIAKGAIETFMKLRGRDPASRGDRYMLVNYEDVPFGIKAGWKESHATFMTELRNLQATGLTT-----------------IGQSLRTAFDLLNLNRLVTGIDNYGQGRNPFFLEPAIIIAITDGNKLTSSGGVQD-----ELHLPLTTPLPG------SELTKEPFRWDQRLFALVL 173          
BLAST of mRNA_P-wetherbeei_contig6530.2.1 vs. uniprot
Match: A0A6I9NP72_9TELE (integrator complex subunit 6-like n=1 Tax=Notothenia coriiceps TaxID=8208 RepID=A0A6I9NP72_9TELE)

HSP 1 Score: 91.7 bits (226), Expect = 8.170e-19
Identity = 66/199 (33.17%), Postives = 98/199 (49.25%), Query Frame = 0
Query:    2 VLVFCVDTDATMSSRTTAGITLLDLAKSAIEHATN------ATRNEQHLLVTTADGSDGLKVTWGNSVASFDWQFKTLTTAAVAGNSDGGXXXXXXRGIGGGIAAGLAHAFTLLHQRRLLTGVDHWGRGFAPWLSEPAAVILLTGAAELAGNGGEGDGGSGEDAIAALTAAVAARCGVAATALCEQPWRWDHRLFVLVL 194
            VL+F +DT A+M+ RT  G T LD+AK A+E          A+R ++++LV   D   G+K  W  S A+F  + + L  A +                   I   L  AF LL+  RL+TG+D++G+G  P+  EPA +I +T   +L   GG  D     +    LT  +        + L ++P+RWD RLF LVL
Sbjct:    3 VLLFLIDTSASMNQRTHLGTTFLDIAKGAVETFMKLRGRDPASRGDRYMLVNFEDVPFGIKAGWKESHATFMTELRNLQAAGLTA-----------------IGQSLRTAFDLLNLNRLVTGIDNYGQGRNPFFLEPAIIIAITDGNKLTSGGGVQD-----ELHLPLTTPLPG------SELTKEPFRWDQRLFALVL 173          
BLAST of mRNA_P-wetherbeei_contig6530.2.1 vs. uniprot
Match: A0A8C5G7A3_9TELE (Integrator complex subunit 6 n=3 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5G7A3_9TELE)

HSP 1 Score: 91.7 bits (226), Expect = 6.010e-18
Identity = 67/199 (33.67%), Postives = 99/199 (49.75%), Query Frame = 0
Query:    2 VLVFCVDTDATMSSRTTAGITLLDLAKSAIEHATN------ATRNEQHLLVTTADGSDGLKVTWGNSVASFDWQFKTLTTAAVAGNSDGGXXXXXXRGIGGGIAAGLAHAFTLLHQRRLLTGVDHWGRGFAPWLSEPAAVILLTGAAELAGNGGEGDGGSGEDAIAALTAAVAARCGVAATALCEQPWRWDHRLFVLVL 194
            VL+F +DT A+M+ RT  GIT LD+AK AIE          A+R ++++LV   D   G+K  W  S A+F  + + L    +                   I   L  AF LL+  RL+TG+D++G+G  P+  EPA +I +T   +L  +GG  D     +    LT  +        + L ++P+RWD RLF LVL
Sbjct:    3 VLLFLIDTSASMNQRTHLGITYLDIAKGAIETFMKLRGRDPASRGDRYMLVNYEDVPFGIKAGWKESHATFMTELRNLQATGLTT-----------------IGQSLRTAFDLLNLNRLVTGIDNYGQGRNPFFLEPAIIIAITDGNKLTSSGGVQD-----ELHLPLTTPLPG------SELTKEPFRWDQRLFALVL 173          
BLAST of mRNA_P-wetherbeei_contig6530.2.1 vs. uniprot
Match: A0A6P8T725_GYMAC (integrator complex subunit 6 n=1 Tax=Gymnodraco acuticeps TaxID=8218 RepID=A0A6P8T725_GYMAC)

HSP 1 Score: 91.7 bits (226), Expect = 6.020e-18
Identity = 66/199 (33.17%), Postives = 98/199 (49.25%), Query Frame = 0
Query:    2 VLVFCVDTDATMSSRTTAGITLLDLAKSAIEHATN------ATRNEQHLLVTTADGSDGLKVTWGNSVASFDWQFKTLTTAAVAGNSDGGXXXXXXRGIGGGIAAGLAHAFTLLHQRRLLTGVDHWGRGFAPWLSEPAAVILLTGAAELAGNGGEGDGGSGEDAIAALTAAVAARCGVAATALCEQPWRWDHRLFVLVL 194
            VL+F +DT A+M+ RT  G T LD+AK A+E          A+R ++++LV   D   G+K  W  S A+F  + + L  A +                   I   L  AF LL+  RL+TG+D++G+G  P+  EPA +I +T   +L   GG  D     +    LT  +        + L ++P+RWD RLF LVL
Sbjct:    3 VLLFLIDTSASMNQRTHLGTTFLDIAKGAVETFMKLRGRDPASRGDRYMLVNFEDVPFGIKAGWKESHATFMTELRNLQAAGLTA-----------------IGQSLRTAFDLLNLNRLVTGIDNYGQGRNPFFLEPAIIIAITDGNKLTSGGGVQD-----ELHLPLTTPLPG------SELTKEPFRWDQRLFALVL 173          
BLAST of mRNA_P-wetherbeei_contig6530.2.1 vs. uniprot
Match: UPI00146D1CEA (integrator complex subunit 6 n=1 Tax=Trematomus bernacchii TaxID=40690 RepID=UPI00146D1CEA)

HSP 1 Score: 91.7 bits (226), Expect = 6.020e-18
Identity = 66/199 (33.17%), Postives = 98/199 (49.25%), Query Frame = 0
Query:    2 VLVFCVDTDATMSSRTTAGITLLDLAKSAIEHATN------ATRNEQHLLVTTADGSDGLKVTWGNSVASFDWQFKTLTTAAVAGNSDGGXXXXXXRGIGGGIAAGLAHAFTLLHQRRLLTGVDHWGRGFAPWLSEPAAVILLTGAAELAGNGGEGDGGSGEDAIAALTAAVAARCGVAATALCEQPWRWDHRLFVLVL 194
            VL+F +DT A+M+ RT  G T LD+AK A+E          A+R ++++LV   D   G+K  W  S A+F  + + L  A +                   I   L  AF LL+  RL+TG+D++G+G  P+  EPA +I +T   +L   GG  D     +    LT  +        + L ++P+RWD RLF LVL
Sbjct:    3 VLLFLIDTSASMNQRTHLGTTFLDIAKGAVETFMKLRGRDPASRGDRYMLVNFEDVPFGIKAGWKESHATFMTELRNLQAAGLTA-----------------IGQSLRTAFDLLNLNRLVTGIDNYGQGRNPFFLEPAIIIAITDGNKLTSGGGVQD-----ELHLPLTTPLPG------SELTKEPFRWDQRLFALVL 173          
BLAST of mRNA_P-wetherbeei_contig6530.2.1 vs. uniprot
Match: A0A6J2S006_COTGO (integrator complex subunit 6-like n=1 Tax=Cottoperca gobio TaxID=56716 RepID=A0A6J2S006_COTGO)

HSP 1 Score: 91.3 bits (225), Expect = 8.160e-18
Identity = 66/199 (33.17%), Postives = 98/199 (49.25%), Query Frame = 0
Query:    2 VLVFCVDTDATMSSRTTAGITLLDLAKSAIEHATN------ATRNEQHLLVTTADGSDGLKVTWGNSVASFDWQFKTLTTAAVAGNSDGGXXXXXXRGIGGGIAAGLAHAFTLLHQRRLLTGVDHWGRGFAPWLSEPAAVILLTGAAELAGNGGEGDGGSGEDAIAALTAAVAARCGVAATALCEQPWRWDHRLFVLVL 194
            VL+F +DT A+M+ RT  G T LD+AK A+E          A+R ++++LV   D   G+K  W  S A+F  + + L  A +                   I   L  AF LL+  RL+TG+D++G+G  P+  EPA +I +T   +L   GG  D     +    LT  +        + L ++P+RWD RLF LVL
Sbjct:    3 VLLFLIDTSASMNQRTHLGTTFLDIAKGAVETFMKLRGRDPASRGDRYMLVNFEDVPFGIKAGWKESHATFMTELRNLQAAGLTA-----------------IGHSLRTAFDLLNLNRLVTGIDNYGQGRNPFFLEPAIIIAITDGNKLTSGGGVQD-----ELHLPLTTPLPG------SELTKEPFRWDQRLFALVL 173          
BLAST of mRNA_P-wetherbeei_contig6530.2.1 vs. uniprot
Match: UPI00146C961C (LOW QUALITY PROTEIN: integrator complex subunit 6 n=1 Tax=Pseudochaenichthys georgianus TaxID=52239 RepID=UPI00146C961C)

HSP 1 Score: 91.3 bits (225), Expect = 8.190e-18
Identity = 66/199 (33.17%), Postives = 98/199 (49.25%), Query Frame = 0
Query:    2 VLVFCVDTDATMSSRTTAGITLLDLAKSAIEHATN------ATRNEQHLLVTTADGSDGLKVTWGNSVASFDWQFKTLTTAAVAGNSDGGXXXXXXRGIGGGIAAGLAHAFTLLHQRRLLTGVDHWGRGFAPWLSEPAAVILLTGAAELAGNGGEGDGGSGEDAIAALTAAVAARCGVAATALCEQPWRWDHRLFVLVL 194
            VL+F +DT A+M+ RT  G T LD+AK A+E          A+R ++++LV   D   G+K  W  S A+F  + + L  A +                   I   L  AF LL+  RL+TG+D++G+G  P+  EPA +I +T   +L   GG  D     +    LT  +        + L ++P+RWD RLF LVL
Sbjct:    3 VLLFLIDTSASMNQRTHLGTTFLDIAKGAVETFMKLRGRDPASRGDRYMLVNFEDVPFGIKAGWKESHATFMTELRNLQAAGLTA-----------------IGQSLRTAFDLLNLNRLVTGIDNYGQGRNPFFLEPAIIIAITDGNKLTSGGGVQD-----ELHLPLTXPLPG------SELTKEPFRWDQRLFALVL 173          
BLAST of mRNA_P-wetherbeei_contig6530.2.1 vs. uniprot
Match: A0A669F202_ORENI (VWFA domain-containing protein n=8 Tax=Percomorphaceae TaxID=1489872 RepID=A0A669F202_ORENI)

HSP 1 Score: 90.5 bits (223), Expect = 1.120e-17
Identity = 65/199 (32.66%), Postives = 99/199 (49.75%), Query Frame = 0
Query:    2 VLVFCVDTDATMSSRTTAGITLLDLAKSAIEHATN------ATRNEQHLLVTTADGSDGLKVTWGNSVASFDWQFKTLTTAAVAGNSDGGXXXXXXRGIGGGIAAGLAHAFTLLHQRRLLTGVDHWGRGFAPWLSEPAAVILLTGAAELAGNGGEGDGGSGEDAIAALTAAVAARCGVAATALCEQPWRWDHRLFVLVL 194
            VL+F +DT A+M+ RT  G T LD+AK A+E          A+R ++++LV   D   G+K  W  S A+F  + + L    +                   I   L +AF LL+  RL+TG+D++G+G  P+  EPA +I +T   +L  +GG  D     +    LT  +        + L ++P+RWD RLF LVL
Sbjct:    3 VLLFLIDTSASMNQRTHLGTTYLDIAKGAVETFMKLRGRDPASRGDRYMLVNFEDVPFGIKAGWKESHATFMTELRNLQATGLTT-----------------IGQSLRNAFDLLNLNRLVTGIDNYGQGRNPFFLEPAIIIAITDGNKLTSSGGVQD-----ELHLPLTTPLPG------SELTKEPFRWDQRLFALVL 173          
BLAST of mRNA_P-wetherbeei_contig6530.2.1 vs. uniprot
Match: A0A668S3K1_OREAU (Integrator complex subunit 6 n=1 Tax=Oreochromis aureus TaxID=47969 RepID=A0A668S3K1_OREAU)

HSP 1 Score: 90.5 bits (223), Expect = 1.460e-17
Identity = 65/199 (32.66%), Postives = 99/199 (49.75%), Query Frame = 0
Query:    2 VLVFCVDTDATMSSRTTAGITLLDLAKSAIEHATN------ATRNEQHLLVTTADGSDGLKVTWGNSVASFDWQFKTLTTAAVAGNSDGGXXXXXXRGIGGGIAAGLAHAFTLLHQRRLLTGVDHWGRGFAPWLSEPAAVILLTGAAELAGNGGEGDGGSGEDAIAALTAAVAARCGVAATALCEQPWRWDHRLFVLVL 194
            VL+F +DT A+M+ RT  G T LD+AK A+E          A+R ++++LV   D   G+K  W  S A+F  + + L    +                   I   L +AF LL+  RL+TG+D++G+G  P+  EPA +I +T   +L  +GG  D     +    LT  +        + L ++P+RWD RLF LVL
Sbjct:    3 VLLFLIDTSASMNQRTHLGTTYLDIAKGAVETFMKLRGRDPASRGDRYMLVNFEDVPFGIKAGWKESHATFMTELRNLQATGLTT-----------------IGQSLRNAFDLLNLNRLVTGIDNYGQGRNPFFLEPAIIIAITDGNKLTSSGGVQD-----ELHLPLTTPLPG------SELTKEPFRWDQRLFALVL 173          
BLAST of mRNA_P-wetherbeei_contig6530.2.1 vs. uniprot
Match: A0A669CFM7_ORENI (VWFA domain-containing protein n=1 Tax=Oreochromis niloticus TaxID=8128 RepID=A0A669CFM7_ORENI)

HSP 1 Score: 90.5 bits (223), Expect = 1.480e-17
Identity = 65/199 (32.66%), Postives = 99/199 (49.75%), Query Frame = 0
Query:    2 VLVFCVDTDATMSSRTTAGITLLDLAKSAIEHATN------ATRNEQHLLVTTADGSDGLKVTWGNSVASFDWQFKTLTTAAVAGNSDGGXXXXXXRGIGGGIAAGLAHAFTLLHQRRLLTGVDHWGRGFAPWLSEPAAVILLTGAAELAGNGGEGDGGSGEDAIAALTAAVAARCGVAATALCEQPWRWDHRLFVLVL 194
            VL+F +DT A+M+ RT  G T LD+AK A+E          A+R ++++LV   D   G+K  W  S A+F  + + L    +                   I   L +AF LL+  RL+TG+D++G+G  P+  EPA +I +T   +L  +GG  D     +    LT  +        + L ++P+RWD RLF LVL
Sbjct:    3 VLLFLIDTSASMNQRTHLGTTYLDIAKGAVETFMKLRGRDPASRGDRYMLVNFEDVPFGIKAGWKESHATFMTELRNLQATGLTT-----------------IGQSLRNAFDLLNLNRLVTGIDNYGQGRNPFFLEPAIIIAITDGNKLTSSGGVQD-----ELHLPLTTPLPG------SELTKEPFRWDQRLFALVL 173          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6530.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI0010567D1E2.670e-1933.67integrator complex subunit 6 isoform X4 n=4 Tax=Eu... [more]
A0A6I9NP72_9TELE8.170e-1933.17integrator complex subunit 6-like n=1 Tax=Notothen... [more]
A0A8C5G7A3_9TELE6.010e-1833.67Integrator complex subunit 6 n=3 Tax=Gouania willd... [more]
A0A6P8T725_GYMAC6.020e-1833.17integrator complex subunit 6 n=1 Tax=Gymnodraco ac... [more]
UPI00146D1CEA6.020e-1833.17integrator complex subunit 6 n=1 Tax=Trematomus be... [more]
A0A6J2S006_COTGO8.160e-1833.17integrator complex subunit 6-like n=1 Tax=Cottoper... [more]
UPI00146C961C8.190e-1833.17LOW QUALITY PROTEIN: integrator complex subunit 6 ... [more]
A0A669F202_ORENI1.120e-1732.66VWFA domain-containing protein n=8 Tax=Percomorpha... [more]
A0A668S3K1_OREAU1.460e-1732.66Integrator complex subunit 6 n=1 Tax=Oreochromis a... [more]
A0A669CFM7_ORENI1.480e-1732.66VWFA domain-containing protein n=1 Tax=Oreochromis... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12957DEAD/H BOX POLYPEPTIDE 26/DICE1-RELATEDcoord: 1..196
NoneNo IPR availablePANTHERPTHR12957:SF2INTEGRATOR COMPLEX SUBUNIT 6coord: 1..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6530contigP-wetherbeei_contig6530:2354..3402 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6530.2.1mRNA_P-wetherbeei_contig6530.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6530 2245..3402 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6530.2.1 ID=prot_P-wetherbeei_contig6530.2.1|Name=mRNA_P-wetherbeei_contig6530.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=203bp
MVLVFCVDTDATMSSRTTAGITLLDLAKSAIEHATNATRNEQHLLVTTAD
GSDGLKVTWGNSVASFDWQFKTLTTAAVAGNSDGGDGGSGGRGIGGGIAA
GLAHAFTLLHQRRLLTGVDHWGRGFAPWLSEPAAVILLTGAAELAGNGGE
GDGGSGEDAIAALTAAVAARCGVAATALCEQPWRWDHRLFVLVLAPRPPP
PAA
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