mRNA_P-wetherbeei_contig6527.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6527.1.1 vs. uniprot
Match: A0A7S1XJ32_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJ32_9STRA) HSP 1 Score: 187 bits (475), Expect = 5.180e-57 Identity = 83/101 (82.18%), Postives = 93/101 (92.08%), Query Frame = 3
Query: 120 DRRVWTKEEDNGIKTLVAKYGTRSWSVIAEHIITDFNVHGRSGKQCRERWHNHLDPCINKNAWTEEEERVMAEAHRELGNRWSEIAKRLPGRTDNHVKNHW 422
DRRVWTKEED+ I+ LVAK+GTRSWSVIAE I+TDFN+ GR+GKQCRERWHNHLDP INK AWT EEE++M EAH+ELGN+WSEIAKRLPGRTDNHVKNHW
Sbjct: 52 DRRVWTKEEDHAIRELVAKHGTRSWSVIAERIVTDFNITGRTGKQCRERWHNHLDPTINKGAWTPEEEQIMVEAHKELGNKWSEIAKRLPGRTDNHVKNHW 152
BLAST of mRNA_P-wetherbeei_contig6527.1.1 vs. uniprot
Match: F0YL28_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL28_AURAN) HSP 1 Score: 183 bits (465), Expect = 2.530e-56 Identity = 84/107 (78.50%), Postives = 94/107 (87.85%), Query Frame = 3
Query: 105 MGAVIDRRVWTKEEDNGIKTLVAKYGTRSWSVIAEHIITDFNVHGRSGKQCRERWHNHLDPCINKNAWTEEEERVMAEAHRELG-NRWSEIAKRLPGRTDNHVKNHW 422
M +V DRRVWT +EDN I+ LV KYGTRSWSVIAEHI+ DFN+ GR+GKQCRERWHNHLDP INK AWTEEEER+MA+AH+ LG N+WSEIAK LPGRTDNHVKNHW
Sbjct: 1 MSSVGDRRVWTVQEDNAIRQLVMKYGTRSWSVIAEHIVQDFNIDGRTGKQCRERWHNHLDPHINKEAWTEEEERIMADAHKTLGCNKWSEIAKLLPGRTDNHVKNHW 107
BLAST of mRNA_P-wetherbeei_contig6527.1.1 vs. uniprot
Match: F0YL55_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YL55_AURAN) HSP 1 Score: 180 bits (457), Expect = 4.380e-56 Identity = 78/101 (77.23%), Postives = 93/101 (92.08%), Query Frame = 3
Query: 120 DRRVWTKEEDNGIKTLVAKYGTRSWSVIAEHIITDFNVHGRSGKQCRERWHNHLDPCINKNAWTEEEERVMAEAHRELGNRWSEIAKRLPGRTDNHVKNHW 422
DRRVW+++ED+ IK LV +YGTRSWSVIAEHI++D+N+ GR+GKQCRERWHNHLDP INK+AWT +EERVMA+AH+ LGN+WSEIAK LPGRTDNHVKNHW
Sbjct: 5 DRRVWSQQEDSAIKDLVMRYGTRSWSVIAEHIVSDYNIEGRTGKQCRERWHNHLDPHINKDAWTADEERVMADAHKSLGNKWSEIAKLLPGRTDNHVKNHW 105
BLAST of mRNA_P-wetherbeei_contig6527.1.1 vs. uniprot
Match: D7G1V7_ECTSI (Myb-like DNA-binding domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V7_ECTSI) HSP 1 Score: 151 bits (382), Expect = 2.690e-41 Identity = 65/101 (64.36%), Postives = 81/101 (80.20%), Query Frame = 3
Query: 120 DRRVWTKEEDNGIKTLVAKYGTRSWSVIAEHIITDFNVHGRSGKQCRERWHNHLDPCINKNAWTEEEERVMAEAHRELGNRWSEIAKRLPGRTDNHVKNHW 422
+RRVW++EED+ I+ LV ++GTRSW+ I EH+ D+++ GRSGKQCRERWHNHLDP I K WT EEE ++ + E+GNRWSEIAKRLPGRTDN VKN W
Sbjct: 16 NRRVWSREEDDAIRVLVKRHGTRSWATIEEHLAADYSIVGRSGKQCRERWHNHLDPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFW 116
BLAST of mRNA_P-wetherbeei_contig6527.1.1 vs. uniprot
Match: A0A835YH49_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH49_9STRA) HSP 1 Score: 139 bits (351), Expect = 2.530e-40 Identity = 59/100 (59.00%), Postives = 76/100 (76.00%), Query Frame = 3
Query: 123 RRVWTKEEDNGIKTLVAKYGTRSWSVIAEHIITDFNVHGRSGKQCRERWHNHLDPCINKNAWTEEEERVMAEAHRELGNRWSEIAKRLPGRTDNHVKNHW 422
R+ WT ED I+ L + G +W+ +A+ + D+ ++GR+ KQC ERWHNHL P I+K WT EEE++MA+AH ELGN+WSEIAKRLPGRTDNHVKNHW
Sbjct: 4 RKTWTPREDEAIRNLAGRLGMNAWTELAKCLEKDYGIYGRTSKQCWERWHNHLSPGISKAPWTTEEEQIMAQAHEELGNKWSEIAKRLPGRTDNHVKNHW 103
BLAST of mRNA_P-wetherbeei_contig6527.1.1 vs. uniprot
Match: A0A0V0Q997_PSEPJ (Homeodomain protein n=1 Tax=Pseudocohnilembus persalinus TaxID=266149 RepID=A0A0V0Q997_PSEPJ) HSP 1 Score: 152 bits (383), Expect = 5.920e-40 Identity = 66/102 (64.71%), Postives = 82/102 (80.39%), Query Frame = 3
Query: 117 IDRRVWTKEEDNGIKTLVAKYGTRSWSVIAEHIITDFNVHGRSGKQCRERWHNHLDPCINKNAWTEEEERVMAEAHRELGNRWSEIAKRLPGRTDNHVKNHW 422
IDRR WT EED I LV KYG + W+++A+ + D+N+ RSGKQCRERWHNHLDP INK+ WTEEEE+V+ EAHR+ GN+W+EIAK LPGRTDN +KNH+
Sbjct: 7 IDRRAWTSEEDKAIIELVQKYGIKKWTIVAKKMQEDYNLKDRSGKQCRERWHNHLDPSINKSEWTEEEEKVIFEAHRQFGNKWAEIAKLLPGRTDNSIKNHF 108
BLAST of mRNA_P-wetherbeei_contig6527.1.1 vs. uniprot
Match: A0A835ZB36_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB36_9STRA) HSP 1 Score: 142 bits (359), Expect = 8.530e-40 Identity = 64/80 (80.00%), Postives = 72/80 (90.00%), Query Frame = 3
Query: 123 RRVWTKEEDNGIKTLVAKYGTRSWSVIAEHIITDFNVHGRSGKQCRERWHNHLDPCINKNAWTEEEERVMAEAHRELGNR 362
RRVWTKEED I+ LV +YGTRSWSVIA+HI DF++ GRSGKQCRERWHNHLDP INKNAWTEEEER+M+EAHR+LGNR
Sbjct: 1 RRVWTKEEDEAIRGLVLQYGTRSWSVIADHIAKDFSIQGRSGKQCRERWHNHLDPHINKNAWTEEEERIMSEAHRQLGNR 80
BLAST of mRNA_P-wetherbeei_contig6527.1.1 vs. uniprot
Match: D7FMG3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMG3_ECTSI) HSP 1 Score: 151 bits (382), Expect = 8.590e-40 Identity = 65/100 (65.00%), Postives = 84/100 (84.00%), Query Frame = 3
Query: 123 RRVWTKEEDNGIKTLVAKYGTRSWSVIAEHIITDFNVHGRSGKQCRERWHNHLDPCINKNAWTEEEERVMAEAHRELGNRWSEIAKRLPGRTDNHVKNHW 422
RR WTK +DN ++ LVA +GT++W+V+ +++I+ + ++GRSGKQ RERWHNHL+P I KNAWT +EER+MAEA +LGNRWSEIAK LPGRTDN VKNHW
Sbjct: 23 RRPWTKHDDNAVRELVATHGTKNWAVVEQNMISVYGIYGRSGKQSRERWHNHLNPSIKKNAWTPDEERIMAEARAKLGNRWSEIAKLLPGRTDNQVKNHW 122
BLAST of mRNA_P-wetherbeei_contig6527.1.1 vs. uniprot
Match: A0A2R5FYY8_9STRA (Transcription factor MYB118 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FYY8_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.320e-39 Identity = 64/101 (63.37%), Postives = 82/101 (81.19%), Query Frame = 3
Query: 120 DRRVWTKEEDNGIKTLVAKYGTRSWSVIAEHIITDFNVHGRSGKQCRERWHNHLDPCINKNAWTEEEERVMAEAHRELGNRWSEIAKRLPGRTDNHVKNHW 422
DRR W++ ED+ I+TLV ++GT+ WS IA +I+D+ + R+GKQCRERWHNHLDP I K+ WT EEE +MA+AH+ LGNRWSEI+K LPGRTDN +KNHW
Sbjct: 13 DRRAWSQREDDAIRTLVKEHGTKRWSTIATRLISDYRIDCRTGKQCRERWHNHLDPTIRKDPWTAEEEAIMAKAHQRLGNRWSEISKLLPGRTDNAIKNHW 113
BLAST of mRNA_P-wetherbeei_contig6527.1.1 vs. uniprot
Match: D8LCF5_ECTSI (Myb-like DNA-binding domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCF5_ECTSI) HSP 1 Score: 138 bits (347), Expect = 3.910e-39 Identity = 61/103 (59.22%), Postives = 82/103 (79.61%), Query Frame = 3
Query: 114 VIDRRVWTKEEDNGIKTLVAKYGTRSWSVIAEHIITDFNVH-GRSGKQCRERWHNHLDPCINKNAWTEEEERVMAEAHRELGNRWSEIAKRLPGRTDNHVKNH 419
+ +R++W+ EED+ ++ LV K+GT W++IAE++ ++N + GRSGKQC ERWHNHLDP I K W+EEEE +++ HRELGNRW+EIAK LPGRTDN VKNH
Sbjct: 35 ISNRQIWSAEEDDAVRRLVEKFGTSGWTLIAENLALEYNNNQGRSGKQCWERWHNHLDPTIRKCEWSEEEEVTLSKQHRELGNRWAEIAKHLPGRTDNQVKNH 137 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6527.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6527.1.1 >prot_P-wetherbeei_contig6527.1.1 ID=prot_P-wetherbeei_contig6527.1.1|Name=mRNA_P-wetherbeei_contig6527.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=135bp MEQPLMGPPAEAFAPNERDYPLPQYPPPMGAVIDRRVWTKEEDNGIKTLVback to top mRNA from alignment at P-wetherbeei_contig6527:291..1127- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6527.1.1 ID=mRNA_P-wetherbeei_contig6527.1.1|Name=mRNA_P-wetherbeei_contig6527.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=837bp|location=Sequence derived from alignment at P-wetherbeei_contig6527:291..1127- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6527:291..1127- >mRNA_P-wetherbeei_contig6527.1.1 ID=mRNA_P-wetherbeei_contig6527.1.1|Name=mRNA_P-wetherbeei_contig6527.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=405bp|location=Sequence derived from alignment at P-wetherbeei_contig6527:291..1127- (Phaeothamnion wetherbeei SAG_119_79)back to top |