mRNA_P-wetherbeei_contig6521.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6521.1.1 vs. uniprot
Match: A0A6H5JL55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL55_9PHAE) HSP 1 Score: 71.2 bits (173), Expect = 2.200e-12 Identity = 35/93 (37.63%), Postives = 61/93 (65.59%), Query Frame = 1
Query: 1 QQARGLRVADKNLFGGGSSDPLVKLMVDGCDDQKTKVVKENLAPQWNESFDFFVVESSKSLELRVEDDDLTSNDFLGRVSVHMDELKHKQKAS 279
++ +GLR D +L G SSDP VKL DG + +T V++NLAP+W+E F+F V + ++ LE+ V D D+ ++ +G + +++L HK++ +
Sbjct: 227 RRGKGLRGLDVDLMGEASSDPFVKLTCDGVE-HRTTTVEKNLAPEWDEVFEFAVKDFTRRLEVEVLDADVVVDEAMGAFVIKLEDLLHKRRVT 318
BLAST of mRNA_P-wetherbeei_contig6521.1.1 vs. uniprot
Match: UPI00189A0723 (extended synaptotagmin-3 n=1 Tax=Nematolebias whitei TaxID=451745 RepID=UPI00189A0723) HSP 1 Score: 66.2 bits (160), Expect = 1.230e-10 Identity = 39/93 (41.94%), Postives = 59/93 (63.44%), Query Frame = 1
Query: 4 QARGLRVADKNLFG--GGSSDPLVKLMVDGCDDQKTKVVKENLAPQWNESFDFFVVES-SKSLELRVEDDDLTSNDFLGRVSVHMDELKHKQK 273
+AR L D + G G SDP VKL V G + KTK +KENL P+WNE ++F V E+ + LE+ + D+D +DFLGR ++ + E+K +++
Sbjct: 324 EARDLVAKDTYMMGLVKGKSDPYVKLRV-GNRNFKTKTIKENLHPKWNEVYEFVVHEAPGQELEMELYDEDTDKDDFLGRYNLDLGEVKREKE 415
BLAST of mRNA_P-wetherbeei_contig6521.1.1 vs. uniprot
Match: A0A834BWP5_ORYME (Multiple C2 and transmembrane domain-containing protein 2 n=3 Tax=Oryzias TaxID=8089 RepID=A0A834BWP5_ORYME) HSP 1 Score: 65.5 bits (158), Expect = 2.290e-10 Identity = 37/87 (42.53%), Postives = 56/87 (64.37%), Query Frame = 1
Query: 1 QQARGLRVADKNLFGGGSSDPLVKLMVDGCDDQKTKVVKENLAPQWNESFDFFVVESSKSLELRVEDDDLTSNDFLGRVSVHMDELK 261
++ R L V D+ G+SDP VKL +DG K+KVV ++L P WNESF V + ++ L ++V D DLT++DF+G SV + +L+
Sbjct: 196 KEGRNLVVRDRC----GTSDPYVKLKIDGKTFYKSKVVYKSLNPAWNESFHLPVKDLTQKLHIKVYDRDLTTDDFMGSASVLLSDLE 278
BLAST of mRNA_P-wetherbeei_contig6521.1.1 vs. uniprot
Match: E7F9J5_DANRE (Multiple C2 domains, transmembrane 2b n=6 Tax=Danio rerio TaxID=7955 RepID=E7F9J5_DANRE) HSP 1 Score: 65.1 bits (157), Expect = 3.100e-10 Identity = 34/71 (47.89%), Postives = 50/71 (70.42%), Query Frame = 1
Query: 49 GSSDPLVKLMVDGCDDQKTKVVKENLAPQWNESFDFFVVESSKSLELRVEDDDLTSNDFLGRVSVHMDELK 261
G+SDP VK+ +DG K+KVV +NL P WNESF F + +++ ++V D DLTS+DF+G SV +D+L+
Sbjct: 70 GTSDPYVKVKLDGKMVYKSKVVLKNLNPVWNESFTFPIRSLEQTVFIKVFDRDLTSDDFMGSCSVGLDKLE 140
BLAST of mRNA_P-wetherbeei_contig6521.1.1 vs. uniprot
Match: A0A2D4BI12_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BI12_PYTIN) HSP 1 Score: 65.1 bits (157), Expect = 3.200e-10 Identity = 34/72 (47.22%), Postives = 49/72 (68.06%), Query Frame = 1
Query: 46 GGSSDPLVKLMVDGCDDQKTKVVKENLAPQWNESFDFFVVESSKSLELRVEDDDLTSNDFLGRVSVHMDELK 261
GG+SDPLVKL ++G + ++ K L PQWNE F FFV + + +L L VED D+T NDF+G+ V + +L+
Sbjct: 190 GGTSDPLVKLTLNGKKHETSRKDK-TLRPQWNEKFGFFVTDINTTLSLVVEDFDVTINDFMGQAKVDVSKLE 260
BLAST of mRNA_P-wetherbeei_contig6521.1.1 vs. uniprot
Match: A0A3B3I539_ORYLA (Multiple C2 and transmembrane domain-containing protein 2 n=13 Tax=Oryzias latipes TaxID=8090 RepID=A0A3B3I539_ORYLA) HSP 1 Score: 64.7 bits (156), Expect = 4.270e-10 Identity = 34/71 (47.89%), Postives = 49/71 (69.01%), Query Frame = 1
Query: 49 GSSDPLVKLMVDGCDDQKTKVVKENLAPQWNESFDFFVVESSKSLELRVEDDDLTSNDFLGRVSVHMDELK 261
G+SDP VKL VDG K+KVV ++L P WNES V + ++ L+++V D DLT++DF+G SV + EL+
Sbjct: 199 GTSDPYVKLKVDGKTFYKSKVVYKSLNPVWNESISIPVRDLNQKLDIKVYDRDLTTDDFMGSASVLLSELE 269
BLAST of mRNA_P-wetherbeei_contig6521.1.1 vs. uniprot
Match: UPI001FB6E2ED (extended synaptotagmin-3 n=1 Tax=Mugil cephalus TaxID=48193 RepID=UPI001FB6E2ED) HSP 1 Score: 64.3 bits (155), Expect = 5.830e-10 Identity = 37/92 (40.22%), Postives = 56/92 (60.87%), Query Frame = 1
Query: 4 QARGLRVADKNLFG--GGSSDPLVKLMVDGCDDQKTKVVKENLAPQWNESFDFFVVES-SKSLELRVEDDDLTSNDFLGRVSVHMDELKHKQ 270
+AR L D + G G SDP V L V C+ K+K +KENL P+WNE+++F + E+ + LEL V D+D +DFLGR ++ +K ++
Sbjct: 318 EARNLLAKDTYMMGLVKGKSDPYVTLRVGNCN-FKSKTIKENLNPKWNEAYEFVIHEAPGQELELEVYDEDTDKDDFLGRYNLDFGVVKSEK 408
BLAST of mRNA_P-wetherbeei_contig6521.1.1 vs. uniprot
Match: A0A2I4BSI6_9TELE (extended synaptotagmin-3-like n=1 Tax=Austrofundulus limnaeus TaxID=52670 RepID=A0A2I4BSI6_9TELE) HSP 1 Score: 64.3 bits (155), Expect = 5.830e-10 Identity = 38/93 (40.86%), Postives = 59/93 (63.44%), Query Frame = 1
Query: 4 QARGLRVADKNLFG--GGSSDPLVKLMVDGCDDQKTKVVKENLAPQWNESFDFFVVES-SKSLELRVEDDDLTSNDFLGRVSVHMDELKHKQK 273
+AR L D + G G SDP VKL V G + KTK +KENL P+WNE ++F V E+ + LE+ + D+D +DFLG+ ++ + E+K +++
Sbjct: 324 EARDLVAKDTYMMGLVKGKSDPYVKLRV-GNRNFKTKTIKENLHPKWNEVYEFVVNEAPGQELEMELFDEDTDKDDFLGQYNLDLGEVKREKE 415
BLAST of mRNA_P-wetherbeei_contig6521.1.1 vs. uniprot
Match: A0A3Q3BL47_KRYMA (Extended synaptotagmin-3-like n=1 Tax=Kryptolebias marmoratus TaxID=37003 RepID=A0A3Q3BL47_KRYMA) HSP 1 Score: 63.9 bits (154), Expect = 7.960e-10 Identity = 38/93 (40.86%), Postives = 59/93 (63.44%), Query Frame = 1
Query: 4 QARGLRVADKNLFG--GGSSDPLVKLMVDGCDDQKTKVVKENLAPQWNESFDFFVVES-SKSLELRVEDDDLTSNDFLGRVSVHMDELKHKQK 273
+AR L D + G G SDP VKL V G + KTK +KENL P+WNE ++F V E+ + LE+ + D+D +DFLGR ++ + ++K +++
Sbjct: 324 EARDLVAKDTYMMGLVKGKSDPYVKLRV-GNRNFKTKTIKENLHPKWNEVYEFVVHEAPGQELEMELFDEDTDKDDFLGRYNLDLGDVKMEKE 415
BLAST of mRNA_P-wetherbeei_contig6521.1.1 vs. uniprot
Match: A0A3B4U3F3_SERDU (Extended synaptotagmin-3-like n=2 Tax=Seriola TaxID=8160 RepID=A0A3B4U3F3_SERDU) HSP 1 Score: 63.9 bits (154), Expect = 7.960e-10 Identity = 39/93 (41.94%), Postives = 57/93 (61.29%), Query Frame = 1
Query: 4 QARGLRVADKNLFG--GGSSDPLVKLMVDGCDDQKTKVVKENLAPQWNESFDFFVVES-SKSLELRVEDDDLTSNDFLGRVSVHMDELKHKQK 273
+AR L D + G G SDP KL V G + K+K VKENL P+WNE ++F V E+ + LEL + D+D +DFLGR ++ E+K +++
Sbjct: 319 EARDLLAKDTYMMGLVKGKSDPYAKLRV-GNRNIKSKTVKENLHPKWNEVYEFVVHEAPGQELELELYDEDTDKDDFLGRYNLDFGEVKREKE 410 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6521.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6521.1.1 >prot_P-wetherbeei_contig6521.1.1 ID=prot_P-wetherbeei_contig6521.1.1|Name=mRNA_P-wetherbeei_contig6521.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=94bp QQARGLRVADKNLFGGGSSDPLVKLMVDGCDDQKTKVVKENLAPQWNESFback to top mRNA from alignment at P-wetherbeei_contig6521:3117..3398- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6521.1.1 ID=mRNA_P-wetherbeei_contig6521.1.1|Name=mRNA_P-wetherbeei_contig6521.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=282bp|location=Sequence derived from alignment at P-wetherbeei_contig6521:3117..3398- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6521:3117..3398- >mRNA_P-wetherbeei_contig6521.1.1 ID=mRNA_P-wetherbeei_contig6521.1.1|Name=mRNA_P-wetherbeei_contig6521.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=282bp|location=Sequence derived from alignment at P-wetherbeei_contig6521:3117..3398- (Phaeothamnion wetherbeei SAG_119_79)back to top |