prot_P-wetherbeei_contig652.4.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig652.4.2
Unique Name	prot_P-wetherbeei_contig652.4.2
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	768

Homology

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BLAST of mRNA_P-wetherbeei_contig652.4.2 vs. uniprot
Match: D7G6L3_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6L3_ECTSI)

HSP 1 Score: 139 bits (350), Expect = 2.280e-34
Identity = 106/348 (30.46%), Postives = 120/348 (34.48%), Query Frame = 0

Query:  413 RTTLRECLQRFAAPEQLDEGNSWYCSRCKEHRRATKTIQIWRLPEVLIIHLKRFEHRGLLQRDKIECFVDFPINGLDMGPCCIGTAAVLPXXXXXXXXXXXAVAAPTAXXXXXXXXXXXXXXXXXXXXXXVGVAAQAGYRLAPAEVDDGAAEEGKGDGGDVAANGVKECASRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGDGGVSLDPGSETGPGSAEGGDSSNAGTGEAATASLAKKPRPAMTVLPAAGPAGPAAESTLYDLFAVSNHMGGMGFGHYTAYVRDWGPGPTMTPQWWCCDDSNCYQIPEDRVVSQAAYVLFYRRR 760
            R +L++CLQ+F+ PE L E NSWYCSRCKE R+A KTIQ+W LPEVLI+H KRF H G   R K+E FVDFPINGLDM P C G                                                                                                                                                             EGG                   RP                S LYDLFAVSNHMGGMG GHYTA+VRDW  G  M+  W  CDD +C  +PE RV +  AYVLFYRRR
Sbjct:   15 RVSLQDCLQKFSVPETLCEDNSWYCSRCKELRQAVKTIQVWSLPEVLILHFKRFSHAGP-NRGKVELFVDFPINGLDMSPYCRGETL----------------------------------------------------------------------------------------------------------------------------------------------------------EGG-------------------RPM---------------SALYDLFAVSNHMGGMGHGHYTAFVRDW-EGSGMSQDWHVCDDHDCRPVPEARVRTAHAYVLFYRRR 172

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BLAST of mRNA_P-wetherbeei_contig652.4.2 vs. uniprot
Match: A0A6H5L229_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L229_9PHAE)

HSP 1 Score: 144 bits (364), Expect = 1.010e-31
Identity = 132/464 (28.45%), Postives = 157/464 (33.84%), Query Frame = 0

Query:  325 EQRLDEWERAI----GVVTLPEGRYLPNTDTVGAREII------PPNAT---------------LALDWLGALRKLSNEDE---WTAPPDEHPSVARHGGGGSANGVAGRGGGSGDRTTLRECLQRFAAPEQLDEGNSWYCSRCKEHRRATKTIQIWRLPEVLIIHLKRFEHRGLLQRDKIECFVDFPINGLDMGPCCIGTAAVLPXXXXXXXXXXXAVAAPTAXXXXXXXXXXXXXXXXXXXXXXVGVAAQAGYRLAPAEVDDGAAEEGKGDGGDVAANGVKECASRRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVGDGGVSLDPGSETGPGSAEGGDSSNAGTGEAATASLAKKPRPAMTVLPAAGPAGPAAESTLYDLFAVSNHMGGMGFGHYTAYVRDWGPGPTMTPQWWCCDDSNCYQIPEDRVVSQAAYVLFYRRR 760
            +QR  +W+  +    GVV    GR++P TD V A +++       P                  L L+W G L    NE          D H SV            A R      R +L++CLQ+F+ PE L + NSWYCSRCKE R+A KTIQ+W LPEVLI+H KRF H G   R K+E FVDFPINGLDM P C G                                                                                                                                                             EGG                   RP                S LYDLFAVSNHMGGMG GHYTA+VRDW  G  M+  W  CDD +C  +PE RV +  AYVLFYRRR
Sbjct: 1430 DQRQMQWQDRLDAHNGVVVSDLGRFIPPTDAVRAADVLRRRQQQQPQGVILQDLCGGRVQDLDILRLEWSGFLLDNLNESRIHHQCFGEDNHSSVQD---------TALRA----KRVSLQDCLQKFSVPETLCKDNSWYCSRCKELRQAVKTIQVWSLPEVLILHFKRFSHAGP-NRGKVELFVDFPINGLDMSPYCRGETL----------------------------------------------------------------------------------------------------------------------------------------------------------EGG-------------------RPM---------------SALYDLFAVSNHMGGMGHGHYTAFVRDW-EGSGMSQDWHVCDDHDCRPVPEARVRTAHAYVLFYRRR 1690

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BLAST of mRNA_P-wetherbeei_contig652.4.2 vs. uniprot
Match: D0RMA9_PHYIT (Ubiquitin-specific protease, putative n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0RMA9_PHYIT)

HSP 1 Score: 115 bits (288), Expect = 4.550e-25
Identity = 45/84 (53.57%), Postives = 64/84 (76.19%), Query Frame = 0

Query:  412 DRTTLRECLQRFAAPEQLDEGNSWYCSRCKEHRRATKTIQIWRLPEVLIIHLKRFEHRGLLQRDKIECFVDFPINGLDMGPCCI 495
            D  +L +C + F  PE LD+ N WYCS+C EHR+A KT+++WRLP+VL++ LKRFE+R  + RDK++ +VDFP+ GLDM P C+
Sbjct:   86 DGISLDDCFRNFVKPETLDQANLWYCSKCNEHRQARKTMEMWRLPDVLVLSLKRFEYRNEILRDKLDVYVDFPLEGLDMSPYCL 169

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BLAST of mRNA_P-wetherbeei_contig652.4.2 vs. uniprot
Match: G5A3V8_PHYSP (USP domain-containing protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G5A3V8_PHYSP)

HSP 1 Score: 115 bits (288), Expect = 5.110e-25
Identity = 50/94 (53.19%), Postives = 68/94 (72.34%), Query Frame = 0

Query:  406 RGGGSGDRT----TLRECLQRFAAPEQLDEGNSWYCSRCKEHRRATKTIQIWRLPEVLIIHLKRFEHRGLLQRDKIECFVDFPINGLDMGPCCI 495
            RG  SG R     +L +C + F  PE LD+ N WYCS CKEHR+A KT+++WRLP+VL++ LKRFE+R  + RDK++ +VDFP+ GLDM P C+
Sbjct:   76 RGKSSGSRAHEGISLDDCFRNFVKPETLDQSNLWYCSTCKEHRQARKTMEMWRLPDVLVLSLKRFEYRNEILRDKLDVYVDFPLEGLDMSPYCL 169

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BLAST of mRNA_P-wetherbeei_contig652.4.2 vs. uniprot
Match: A0A7S2S141_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S141_9STRA)

HSP 1 Score: 112 bits (281), Expect = 1.500e-24
Identity = 46/79 (58.23%), Postives = 60/79 (75.95%), Query Frame = 0

Query:  416 LRECLQRFAAPEQLDEGNSWYCSRCKEHRRATKTIQIWRLPEVLIIHLKRFEHRGLLQRDKIECFVDFPINGLDMGPCC 494
            L +C + F APE+LDE N WYCS CK H RA KT+++W+LP +LI+HLKRFE +  L+R+K++ FVDFPI GLDM   C
Sbjct:   48 LDKCFENFTAPERLDEHNKWYCSNCKGHVRAMKTMELWKLPNILIVHLKRFEFKHALRREKLDTFVDFPIEGLDMSKHC 126

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BLAST of mRNA_P-wetherbeei_contig652.4.2 vs. uniprot
Match: A0A485LAT8_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LAT8_9STRA)

HSP 1 Score: 121 bits (303), Expect = 1.510e-24
Identity = 50/87 (57.47%), Postives = 68/87 (78.16%), Query Frame = 0

Query:  412 DRTTLRECLQRFAAPEQLDEGNSWYCSRCKEHRRATKTIQIWRLPEVLIIHLKRFEHRGLLQRDKIECFVDFPINGLDMGPCCIGTA 498
            D  +L EC ++F +PEQLDE N WYCS CKEHR+ATKT+Q+++LPEVL++ LKRFE+R  + RDK++  V+FP+ GLDM P C+  A
Sbjct:  736 DTLSLDECFKKFTSPEQLDEDNLWYCSTCKEHRQATKTMQLYKLPEVLVLSLKRFEYRNEVVRDKLDTMVEFPLEGLDMAPYCLSAA 822

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BLAST of mRNA_P-wetherbeei_contig652.4.2 vs. uniprot
Match: A0A7S3Q2J7_9STRA (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q2J7_9STRA)

HSP 1 Score: 121 bits (303), Expect = 1.620e-24
Identity = 51/80 (63.75%), Postives = 61/80 (76.25%), Query Frame = 0

Query:  415 TLRECLQRFAAPEQLDEGNSWYCSRCKEHRRATKTIQIWRLPEVLIIHLKRFEHRGLLQRDKIECFVDFPINGLDMGPCC 494
            TL  CL  F  PE+LDE N WYCS+CK+H RA KT+Q+WRLP VLI+HLKRFE +  L+RDK+E FVDFP+ GLDM   C
Sbjct:  768 TLDHCLDNFTRPERLDEDNKWYCSKCKDHVRAEKTMQLWRLPNVLIVHLKRFEFKNALRRDKLETFVDFPLEGLDMNRYC 847

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BLAST of mRNA_P-wetherbeei_contig652.4.2 vs. uniprot
Match: W4FNJ7_9STRA (Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FNJ7_9STRA)

HSP 1 Score: 120 bits (302), Expect = 2.070e-24
Identity = 64/150 (42.67%), Postives = 90/150 (60.00%), Query Frame = 0

Query:  348 NTDTVGAREIIPPNATLALDWLGALRKLSNEDEWTAPPDEHPSVARHGGGGSANGVAGRGGGSGDRTTLRECLQRFAAPEQLDEGNSWYCSRCKEHRRATKTIQIWRLPEVLIIHLKRFEHRGLLQRDKIECFVDFPINGLDMGPCCIGT 497
            NT TV +   +     L +DW G +R L    E    P  HPS+       +++G++           L EC Q+F + EQLDE N WYCS C++HR+ATKT+Q++ LPEVLI+ LKRFE+R  + RDK++  V+FP+ GLDM P C+ T
Sbjct:  705 NTATVVSTLKLADAGYLGIDWEGDMRGLYKATEPYILP--HPSLESLKAKRASSGLS-----------LAECFQKFTSAEQLDEDNLWYCSTCQKHRQATKTMQLYSLPEVLILSLKRFEYRNEVVRDKLDALVEFPLEGLDMAPFCLST 841

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BLAST of mRNA_P-wetherbeei_contig652.4.2 vs. uniprot
Match: A0A7R9ZMG8_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZMG8_9STRA)

HSP 1 Score: 114 bits (285), Expect = 4.030e-24
Identity = 60/157 (38.22%), Postives = 85/157 (54.14%), Query Frame = 0

Query:  355 REIIPPNAT-----LALDWLGALRKLSNEDEWTAP------------PDEHPSVARHGGGGSANGVAGRGGGSGDRTTLRECLQRFAAPEQLDEGNSWYCSRCKEHRRATKTIQIWRLPEVLIIHLKRFEHRGLLQRDKIECFVDFPINGLDMGPCC 494
            ++++ P  T     L L+W   LR    +DE+                +EHPS+A+      A     R        TL +C   F  PE LD  N WYCS+CK+H RA KT+++WRLP ++++HLKRFE +   +RDK+   VDFP++GLDMGP C
Sbjct:   82 KKVLGPGCTNTFLFLVLEWGTPLRDPEGDDEFDLALQPTVSLKNFFRHNEHPSLAKV----KAQEQNAR---KHRDLTLSDCFDAFTNPEVLDSNNKWYCSQCKDHVRAQKTMKLWRLPNIMVVHLKRFEFKNTFRRDKLNTLVDFPLDGLDMGPHC 231

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BLAST of mRNA_P-wetherbeei_contig652.4.2 vs. uniprot
Match: A0A662XHX6_9STRA (Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XHX6_9STRA)

HSP 1 Score: 119 bits (298), Expect = 6.090e-24
Identity = 51/97 (52.58%), Postives = 70/97 (72.16%), Query Frame = 0

Query:  399 SANGVAGRGGGSGDRTTLRECLQRFAAPEQLDEGNSWYCSRCKEHRRATKTIQIWRLPEVLIIHLKRFEHRGLLQRDKIECFVDFPINGLDMGPCCI 495
            SA   AG G    D  +L +C + F  PE LD+ N WYC++CKEHR+A KT+++WRLP+VL++ LKRFE+R  + RDK++ FVDFP+ GLDM P C+
Sbjct:  713 SAASKAGGGARGSDGISLDDCFRNFVKPETLDQANLWYCAKCKEHRQARKTMEMWRLPDVLVLSLKRFEYRNEILRDKLDMFVDFPLTGLDMAPYCL 809

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig652.4.2 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig652.4.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7G6L3_ECTSI	2.280e-34	30.46	USP domain-containing protein n=1 Tax=Ectocarpus s...	[more]
A0A6H5L229_9PHAE	1.010e-31	28.45	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D0RMA9_PHYIT	4.550e-25	53.57	Ubiquitin-specific protease, putative n=1 Tax=Phyt...	[more]
G5A3V8_PHYSP	5.110e-25	53.19	USP domain-containing protein n=1 Tax=Phytophthora...	[more]
A0A7S2S141_9STRA	1.500e-24	58.23	Hypothetical protein n=1 Tax=Eucampia antarctica T...	[more]
A0A485LAT8_9STRA	1.510e-24	57.47	Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Apha...	[more]
A0A7S3Q2J7_9STRA	1.620e-24	63.75	Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Chae...	[more]
W4FNJ7_9STRA	2.070e-24	42.67	Ubiquitin carboxyl-terminal hydrolase n=3 Tax=Apha...	[more]
A0A7R9ZMG8_9STRA	4.030e-24	38.22	Hypothetical protein n=1 Tax=Craspedostauros austr...	[more]
A0A662XHX6_9STRA	6.090e-24	52.58	Ubiquitin carboxyl-terminal hydrolase n=2 Tax=Noth...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 156..179
None	No IPR available	GENE3D	3.90.70.10	Cysteine proteinases	coord: 617..766 e-value: 2.9E-21 score: 77.7 coord: 379..567 e-value: 6.2E-27 score: 96.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 210..237
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 379..410
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 637..675
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 652..666
None	No IPR available	PANTHER	PTHR21646	UBIQUITIN CARBOXYL-TERMINAL HYDROLASE	coord: 239..761
IPR001394	Peptidase C19, ubiquitin carboxyl-terminal hydrolase	PFAM	PF00443	UCH	coord: 434..757 e-value: 1.8E-26 score: 93.3
IPR018200	Ubiquitin specific protease, conserved site	PROSITE	PS00973	USP_2	coord: 697..714
IPR028889	Ubiquitin specific protease domain	PROSITE	PS50235	USP_3	coord: 1..760 score: 23.551922
IPR038765	Papain-like cysteine peptidase superfamily	SUPERFAMILY	54001	Cysteine proteinases	coord: 413..759

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig652	contig	P-wetherbeei_contig652:4112..7317 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig652.4.2	mRNA_P-wetherbeei_contig652.4.2	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig652 3742..7368 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig652.4.2 ID=prot_P-wetherbeei_contig652.4.2|Name=mRNA_P-wetherbeei_contig652.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=768bp
MGEVREQVSAETCIPVEQLLLVEIYDCTVYKVYGNNDAVGSVRPNDTVVA
YEVLPQRPVVDFSLAVLLHRSFPQYAANKAHGLAEKGSRRLHGFPRILSL
RVTDTCLDVKRRIWAATRLLVNEGRVDVDNAAAEVARAGDAAAFAAEAAE
VAALAAAEAAEAAAEAAEAAAEAAEAAAATAGIVGFAGAGAGGQDEDVAV
ADAAAASAANGSGANDDTPQEDEAAADGTSADGVVDGATASKASKAAAAA
RRRGAGGAGDWSALCAAAAEAMAAAGAAAQDAAAAVARVANEVEGSLPFL
SVAHVDKDGTGCVPPGRLGGSWEEEQRLDEWERAIGVVTLPEGRYLPNTD
TVGAREIIPPNATLALDWLGALRKLSNEDEWTAPPDEHPSVARHGGGGSA
NGVAGRGGGSGDRTTLRECLQRFAAPEQLDEGNSWYCSRCKEHRRATKTI
QIWRLPEVLIIHLKRFEHRGLLQRDKIECFVDFPINGLDMGPCCIGTAAV
LPATALPAAALPAAVAAPTAATAAGTNADAAPAASVRAPAANVGVAAQAG
YRLAPAEVDDGAAEEGKGDGGDVAANGVKECASRRRRRRAAAGSAASAAA
RGEGAGASSAGQRSVLPVPSTKVDVATTATVTVAVGDGGVSLDPGSETGP
GSAEGGDSSNAGTGEAATASLAKKPRPAMTVLPAAGPAGPAAESTLYDLF
AVSNHMGGMGFGHYTAYVRDWGPGPTMTPQWWCCDDSNCYQIPEDRVVSQ
AAYVLFYRRRRQQATPA*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001394	Peptidase_C19_UCH
IPR018200	USP_CS
IPR028889	USP_dom
IPR038765	Papain-like_cys_pep_sf