mRNA_P-wetherbeei_contig652.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig652.1.1
Unique NamemRNA_P-wetherbeei_contig652.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig652.1.1 vs. uniprot
Match: A0A835ZG42_9STRA (WD40-repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG42_9STRA)

HSP 1 Score: 205 bits (521), Expect = 1.580e-57
Identity = 239/265 (90.19%), Postives = 246/265 (92.83%), Query Frame = 1 
Query:    4 PVPQWHRPWKLQSVVSGHLGWVRAIAFDPGNEWFATGSADRTIKIWDFAKCATGAEGGLKLTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETNKVIRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFSFVSAAADNMKRWQARDGMFLNNISGHNSIINALAANHENVLVSGGDNGSICMWDYATG 798
            P P WH PWKLQSVVSGHLGWVRAIAFDPGNEWFATGSADRTIK+WD AKCA GAEGGLKLTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLE NKVIRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      +EFSFVSAAADNMKRWQARDGMFLNN+ GHN+IIN L++N +NVL SGGDNGSI  WDY TG
Sbjct:  127 PKPTWHAPWKLQSVVSGHLGWVRAIAFDPGNEWFATGSADRTIKVWDLAKCAAGAEGGLKLTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLECNKVIRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALAAGKREFSFVSAAADNMKRWQARDGMFLNNMRGHNAIINTLSSNEDNVLFSGGDNGSITFWDYDTG 391
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BLAST of mRNA_P-wetherbeei_contig652.1.1 vs. uniprot
Match: A0A6H5J9L0_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J9L0_9PHAE)

HSP 1 Score: 194 bits (492), Expect = 9.680e-53
Identity = 233/266 (87.59%), Postives = 247/266 (92.86%), Query Frame = 1 
Query:    1 APVPQWHRPWKLQSVVSGHLGWVRAIAFDPGNEWFATGSADRTIKIWDFAKCATGAEGGLKLTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETNKVIRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFSFVSAAADNMKRWQARDGMFLNNISGHNSIINALAANHENVLVSGGDNGSICMWDYATG 798
            AP P+WH PWKL SVVS HLGWVRAIAFDP NEWF TGSADRTIK+WD AK + GAE  LKLTL XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLE N+V+RHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   KEFSFVSAAADNMK+WQ RDGMFLNN+SGHN+IIN+L+ N ++VLVSGGDNGS+C+WDYATG
Sbjct:  187 APRPEWHAPWKLSSVVSAHLGWVRAIAFDPSNEWFVTGSADRTIKVWDLAKASAGAEKALKLTLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEYNRVVRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMHPKEFSFVSAAADNMKKWQGRDGMFLNNMSGHNTIINSLSVNEDSVLVSGGDNGSLCLWDYATG 452
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BLAST of mRNA_P-wetherbeei_contig652.1.1 vs. uniprot
Match: A0A7S2V5E3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V5E3_9STRA)

HSP 1 Score: 192 bits (489), Expect = 3.120e-52
Identity = 226/265 (85.28%), Postives = 243/265 (91.70%), Query Frame = 1 
Query:    4 PVPQWHRPWKLQSVVSGHLGWVRAIAFDPGNEWFATGSADRTIKIWDFAKCATGAEGGLKLTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETNKVIRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFSFVSAAADNMKRWQARDGMFLNNISGHNSIINALAANHENVLVSGGDNGSICMWDYATG 798
            P P+WH PW+LQ+V+SGHLGWVR+IAFDP NEW+ TGSADRTIKIWD AKC+ GAEGGLKLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLE NKV+RHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       KEFSFVSAAADN+K+WQ +DG+FL N+SGHN+IIN  A N + VLVSGGDNGS+C+WDYATG
Sbjct:  196 PRPEWHAPWRLQAVISGHLGWVRSIAFDPSNEWYVTGSADRTIKIWDLAKCSAGAEGGLKLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEYNKVVRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRAVVTHPKEFSFVSAAADNLKKWQCKDGVFLKNLSGHNTIINCAAVNEDGVLVSGGDNGSLCLWDYATG 460
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BLAST of mRNA_P-wetherbeei_contig652.1.1 vs. uniprot
Match: A0A7S2SAC3_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SAC3_9STRA)

HSP 1 Score: 182 bits (461), Expect = 4.530e-49
Identity = 226/265 (85.28%), Postives = 241/265 (90.94%), Query Frame = 1 
Query:    4 PVPQWHRPWKLQSVVSGHLGWVRAIAFDPGNEWFATGSADRTIKIWDFAKCATGAEGGLKLTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETNKVIRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFSFVSAAADNMKRWQARDGMFLNNISGHNSIINALAANHENVLVSGGDNGSICMWDYATG 798
            P P WH PWKL+SVVSGHLGWVRAIAFDPGN+WF TG+ADRT+KIWD AKC+ GA GGLKL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E NKV+RHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +EFSFVSA ADN+K+WQ+RDG F+ N+SGHN+IINALA N + VLVSGGDNGS+  WDY TG
Sbjct:   96 PTPTWHAPWKLKSVVSGHLGWVRAIAFDPGNKWFVTGAADRTLKIWDLAKCSAGAAGGLKLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQNKVVRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAHPREFSFVSAGADNIKKWQSRDGKFMKNLSGHNTIINALAVNEDGVLVSGGDNGSLHFWDYETG 360
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BLAST of mRNA_P-wetherbeei_contig652.1.1 vs. uniprot
Match: A0A7S2CDV4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CDV4_9STRA)

HSP 1 Score: 175 bits (443), Expect = 6.920e-46
Identity = 222/265 (83.77%), Postives = 238/265 (89.81%), Query Frame = 1 
Query:    4 PVPQWHRPWKLQSVVSGHLGWVRAIAFDPGNEWFATGSADRTIKIWDFAKCATGAEGGLKLTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETNKVIRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFSFVSAAADNMKRWQARDGMFLNNISGHNSIINALAANHENVLVSGGDNGSICMWDYATG 798
            P P WH PW+L++VVSGHLGWVRAIAFDPGN WF TG+ADR +KIWD AKCA GA+ GL LTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX E NKV+RHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +EFSF+SA ADN+K+WQ RDG F+ N+SGHN+IINA A N + VLVSGGDNGS+  WDY TG
Sbjct:  163 PKPAWHAPWRLKAVVSGHLGWVRAIAFDPGNRWFCTGAADRCLKIWDLAKCAVGADDGLMLTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEQNKVVRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKHPREFSFISAGADNLKKWQTRDGKFIRNLSGHNTIINATAVNDDGVLVSGGDNGSLHFWDYQTG 427
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BLAST of mRNA_P-wetherbeei_contig652.1.1 vs. uniprot
Match: F0YMH0_AURAN (Uncharacterized protein (Fragment) n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YMH0_AURAN)

HSP 1 Score: 168 bits (426), Expect = 5.750e-45
Identity = 217/263 (82.51%), Postives = 234/263 (88.97%), Query Frame = 1 
Query:   10 PQWHRPWKLQSVVSGHLGWVRAIAFDPGNEWFATGSADRTIKIWDFAKCATGAEGGLKLTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETNKVIRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFSFVSAAADNMKRWQARDGMFLNNISGHNSIINALAANHENVLVSGGDNGSICMWDYATG 798
            P WH PWKL +VVSGHLGWVR++AF+P NEWFATG ADRTIKIWD AKCA GAEGGLKLTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETNKV+RHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        EFSF S AADN+K+WQ +DG FL N+SGH++I+NA+  N + VL S  D+GS+ +WDY TG
Sbjct:    1 PAWHPPWKLAAVVSGHLGWVRSVAFEPRNEWFATGGADRTIKIWDLAKCAAGAEGGLKLTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETNKVVRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSLAVAPFEFSFASGAADNIKKWQCKDGAFLRNLSGHDAIVNAVDVNDDGVLASAADDGSLRLWDYRTG 263
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BLAST of mRNA_P-wetherbeei_contig652.1.1 vs. uniprot
Match: A0A7R9U702_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U702_9STRA)

HSP 1 Score: 153 bits (386), Expect = 5.410e-38
Identity = 214/265 (80.75%), Postives = 235/265 (88.68%), Query Frame = 1 
Query:    4 PVPQWHRPWKLQSVVSGHLGWVRAIAFDPGNEWFATGSADRTIKIWDFAKCATGAEGGLKLTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETNKVIRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFSFVSAAADNMKRWQARDGMFLNNISGHNSIINALAANHENVLVSGGDNGSICMWDYATG 798
            P+P+WH PW+L +V+SGHLGWVR+IAFDP NEWF TGS+DRTIKIWD AKC+ G EGGL+LTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLE NK IRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        AADN+K+W  RDG F+ N+ GH +++NALA N + VL S  DNG++ +WDYA+G
Sbjct:  135 PIPKWHAPWRLSAVISGHLGWVRSIAFDPSNEWFVTGSSDRTIKIWDLAKCSAGLEGGLRLTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLEYNKTIRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAADNVKKWATRDGTFIKNLHGHRAVVNALAMNEDGVLASCADNGTMYLWDYASG 399
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BLAST of mRNA_P-wetherbeei_contig652.1.1 vs. uniprot
Match: A0A7S3DWM6_9STRA (Hypothetical protein n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DWM6_9STRA)

HSP 1 Score: 143 bits (360), Expect = 1.070e-34
Identity = 204/265 (76.98%), Postives = 227/265 (85.66%), Query Frame = 1 
Query:    4 PVPQWHRPWKLQSVVSGHLGWVRAIAFDPGNEWFATGSADRTIKIWDFAKCATGAEGGLKLTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETNKVIRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFSFVSAAADNMKRWQARDGMFLNNISGHNSIINALAANHENVLVSGGDNGSICMWDYATG 798
            P P WH PWKL +V+S HLGWVR++AF P N++ ATGSADRTIKIWDF K + G++  LKLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETN+VIRHYH XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         E +F S AAD +K+WQ +DG FL +++GH ++INA+A N + VLVSGGD+GS+  WDY TG
Sbjct:   81 PTPTWHAPWKLATVLSSHLGWVRSLAFSPDNQYLATGSADRTIKIWDFPKASVGSDQALKLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETNQVIRHYHGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIRAMVQPSFENTFTSGAADCLKQWQGKDGRFLKSLTGHKTVINAMAVNDDGVLVSGGDDGSMQFWDYKTG 345
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BLAST of mRNA_P-wetherbeei_contig652.1.1 vs. uniprot
Match: A0A1E7FVU2_9STRA (WD40 repeat-like protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FVU2_9STRA)

HSP 1 Score: 144 bits (363), Expect = 1.400e-34
Identity = 208/265 (78.49%), Postives = 227/265 (85.66%), Query Frame = 1 
Query:    4 PVPQWHRPWKLQSVVSGHLGWVRAIAFDPGNEWFATGSADRTIKIWDFAKCATGAEGGLKLTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETNKVIRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFSFVSAAADNMKRWQARDGMFLNNISGHNSIINALAANHENVLVSGGDNGSICMWDYATG 798
            P P WH PWKL +V+S HLGWVR+IA DP N+ FATGSADRTIK+WD AK + GA   LKLT XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX ETN+VIRHYH     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   E +FVS A D++K WQA+DG FL + SGH +++NA+A N + VLVSGGD+GS+  WDY TG
Sbjct:  161 PTPTWHAPWKLSTVLSSHLGWVRSIAMDPTNDMFATGSADRTIKLWDLAKASVGASDALKLTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXETNQVIRHYHGHLSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSFENTFVSGATDSLKYWQAKDGKFLKSYSGHKAVVNAMAVNDDGVLVSGGDDGSMHFWDYKTG 425
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BLAST of mRNA_P-wetherbeei_contig652.1.1 vs. uniprot
Match: A0A8J2S2W2_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S2W2_9STRA)

HSP 1 Score: 137 bits (344), Expect = 3.730e-32
Identity = 208/265 (78.49%), Postives = 227/265 (85.66%), Query Frame = 1 
Query:    4 PVPQWHRPWKLQSVVSGHLGWVRAIAFDPGNEWFATGSADRTIKIWDFAKCATGAEGGLKLTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETNKVIRHYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKEFSFVSAAADNMKRWQARDGMFLNNISGHNSIINALAANHENVLVSGGDNGSICMWDYATG 798
            PVPQWH PW L +V SGHLGWVR +AFDP N+WF TGSADRTIK+WD AKC+ GA+GGLKLTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETNKV+R YHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX          D ++ W+ +DG  L  + GHN+++NA   N   VL + GD+GS+ +WDY TG
Sbjct:  129 PVPQWHAPWALHAVASGHLGWVRCVAFDPQNQWFVTGSADRTIKVWDLAKCSAGAQGGLKLTLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLETNKVVRRYHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAVRTWRRKDGALLRTMRGHNAVLNACDVNSAGVLATAGDDGSLRLWDYRTG 393
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig652.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZG42_9STRA1.580e-5790.19WD40-repeat-containing domain protein n=1 Tax=Trib... [more]
A0A6H5J9L0_9PHAE9.680e-5387.59Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2V5E3_9STRA3.120e-5285.28Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2SAC3_9STRA4.530e-4985.28Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2CDV4_9STRA6.920e-4683.77Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0YMH0_AURAN5.750e-4582.51Uncharacterized protein (Fragment) n=2 Tax=Aureoco... [more]
A0A7R9U702_9STRA5.410e-3880.75Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A7S3DWM6_9STRA1.070e-3476.98Hypothetical protein n=1 Tax=Amphiprora paludosa T... [more]
A0A1E7FVU2_9STRA1.400e-3478.49WD40 repeat-like protein n=1 Tax=Fragilariopsis cy... [more]
A0A8J2S2W2_9STRA3.730e-3278.49Hypothetical protein n=2 Tax=Pelagomonas calceolat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig652contigP-wetherbeei_contig652:214..3750 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog115417.EPrPW00000018029
PFAMsWD40
Model size1291
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons8
Evalue4.21e-44
EggNOG OGsKOG0285@1|root,KOG0285@2759|Eukaryota,1MB66@121069|Pythiales
DescriptionPre-mRNA-splicing factor prp46. Source PGD
Cds size399
COG categoryA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig652.1.1prot_P-wetherbeei_contig652.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig652 1730..2854 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186919.5135763-UTR-P-wetherbeei_contig652:213..3481683186919.5135763-UTR-P-wetherbeei_contig652:213..348Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig652 214..348 +
1683186919.5253088-UTR-P-wetherbeei_contig652:804..9421683186919.5253088-UTR-P-wetherbeei_contig652:804..942Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig652 805..942 +
1683186919.5350394-UTR-P-wetherbeei_contig652:1316..14471683186919.5350394-UTR-P-wetherbeei_contig652:1316..1447Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig652 1317..1447 +
1683186919.5470164-UTR-P-wetherbeei_contig652:1719..17291683186919.5470164-UTR-P-wetherbeei_contig652:1719..1729Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig652 1720..1729 +
1683186919.605611-UTR-P-wetherbeei_contig652:2854..28781683186919.605611-UTR-P-wetherbeei_contig652:2854..2878Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig652 2855..2878 +
1683186919.6139474-UTR-P-wetherbeei_contig652:3077..31621683186919.6139474-UTR-P-wetherbeei_contig652:3077..3162Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig652 3078..3162 +
1683186919.6222353-UTR-P-wetherbeei_contig652:3381..37501683186919.6222353-UTR-P-wetherbeei_contig652:3381..3750Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig652 3382..3750 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186919.564556-CDS-P-wetherbeei_contig652:1729..18131683186919.564556-CDS-P-wetherbeei_contig652:1729..1813Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig652 1730..1813 +
1683186919.5753977-CDS-P-wetherbeei_contig652:2118..22761683186919.5753977-CDS-P-wetherbeei_contig652:2118..2276Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig652 2119..2276 +
1683186919.58899-CDS-P-wetherbeei_contig652:2697..28541683186919.58899-CDS-P-wetherbeei_contig652:2697..2854Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig652 2698..2854 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig652.1.1

>prot_P-wetherbeei_contig652.1.1 ID=prot_P-wetherbeei_contig652.1.1|Name=mRNA_P-wetherbeei_contig652.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=133bp
MRTKQQVHCLSGHTDAVGTLATNSVDPQVITGSFDSQVRLWDLTAGKCMA
VLTNHKKAVRAVQMNAKEFSFVSAAADNMKRWQARDGMFLNNISGHNSII
NALAANHENVLVSGGDNGSICMWDYATGKRHD*
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mRNA from alignment at P-wetherbeei_contig652:214..3750+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig652.1.1 ID=mRNA_P-wetherbeei_contig652.1.1|Name=mRNA_P-wetherbeei_contig652.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3537bp|location=Sequence derived from alignment at P-wetherbeei_contig652:214..3750+ (Phaeothamnion wetherbeei SAG_119_79)
GCGCCTGTGCCGCAGTGGCACCGGCCGTGGAAGCTGCAGTCGGTGGTTTC
GGGCCACCTGGGGTGGGTGCGCGCCATCGCCTTCGACCCGGGCAACGAGT
GGTTCGCCACGGGCTCCGCCGACCGCACCATCAAAGTGAGGCAAGGAGAG
GGGAGAGAAGGGAGACGACGTGCCATCATTTTGTTTGTGGTTATACTGTT
CCGTCCGCTTCCGCTTCCGCTTACCTGTCGAAGAGAACGATGATGTTCTC
GCTCCAAAAGGAAAGAATGCCTATCTGTTCATGGTAGGTGTGAGGCTTAT
GGGAGTGCGTGCGTGGCACTGCAGCAGTAGTACTGGTTCTGGGGAGGTCA
TCTTTTCACAGAGGATCTTTGCCAATGCACTTGAGCGCCATACATTTTTG
TCCCACCCAGCACCGGCCTCTCTGCCTTTTCACTCGCCGACTCTCCGTAT
CGTCGTGTCTCGGCGAGGCTAACAGCAAGCTCTTATCTTGTTTGGACTCA
TGAGCAATAAGGGTGTAATTTTTACTTGTTCGTCTAACTCTTGTCACGGA
TTGTCTTCCGCTTGTTGCGCTCCGGCCGGCTGCGGCTGCAGATCTGGGAT
TTTGCGAAGTGCGCGACGGGCGCGGAGGGCGGGCTGAAGCTGACGCTGAC
GGGACACATCAGCACCATCCGCGGCCTCGCGGTCAGCCCGCGCCATCCGT
ACCTCTTCTCCGCGGCCGAGGACAAGAAGGTGCGTGTGTTTGGTGGGAAC
GAGCGACAGAGGGAGCGACGAGGCTGACGAGGAGGGAGAGAGAGAGCGGC
GGGATCTGGCTGCTTGGGTGTATTCCTTCAGAGCTGGAAGCATTTTCCTG
TCGAGTCGGAATCTTTCACTCTTCTTACACAGTGACGCCTCTTTGCAAGA
CCATGCCTTGTGGTATATGGACACTTTGCCATTACTTCCCGCCATTACTT
CCCGAGATATGAGATGTTTATCGGTTGGGTTGACCTCAATTCCTGCTGGC
GCCAGCTTCCCGCCGCCTGCCTCACTTGCCGCCGTGCCGCCCTCGCCGCC
CCCCCGCCGCCGCTGGTGCTGTTAACTTCTACTGCTGTTACTTCTTACCA
CAGGTGCTGTGCTGGGACCTCGAGACCAACAAGGTGATCCGGCACTACCA
CGGCCATCTCTCAGGCATCTACGCCCTTAAGCTCCACCCCACCCTCGACA
TCCTCGTCACCGGGGGCCGGGACGCCGTCGCCAGGTCAGTCAAAGAGGAA
TTGGTTAACAAGGAGAACTTGGCGGCTGGCCTGGCAGTGCGGCGACTTGG
GAGGTTGTGGTGGAAGCCGCTCTTGCTTGCACGGCAGTGCTGCTTCATTC
TTGAAAGGATGGATGTATCCTTGCAGTGCGCAGGCTTCGGTTTCCAACGA
GGTGTGTCTGGGAGGATCGGCCCTTTCGGTGCTTTCCATTCCAGTCTCTC
AGCCTCATCCTTTCCTCCCCATTTCCTTTCTCTCTCTTGCTGCCCGCCTG
CCGCAGGGTGTGGGACATGCGCACGAAGCAGCAGGTACACTGCCTCTCCG
GCCACACGGACGCCGTCGGGACCCTCGCTACCAACTCTGTCGACCCCCAG
GTACATTTCTAAGATCCTCATTGGCTGTATGGTTAGCGTTGTGTCTTCTA
CTGATTTTCTTTCTTCCTCGAACGGTTACAACCTGCTCAATACGATGTGA
GCAAGAACTGTGCTGCGCTGAGCTAGGAAGTTCGCACCCTTGGCCGATTG
CTAAAGGCTTCCTTTGATGGGAGTTATTCTTCCATTTCCTTGCCTTGACA
TGTCTCGTCGCACCTCGCCGTGCTATTACTTGCTTTTCTTCCCTTTCGCG
ACGTATCTGCCGCGTGTCTTCAAACGGCAATAACCGCGTCATGGCGACGC
TGCAGGTGATAACGGGGTCGTTTGACAGCCAGGTGCGGCTGTGGGACCTG
ACGGCGGGCAAGTGCATGGCGGTGCTCACAAACCACAAGAAGGCCGTGCG
CGCCGTGCAGATGAACGCCAAGGAGTTCAGCTTCGTCAGCGCCGCCGCTG
ACAACATGAAGCGGTGAGCCAGCAAGAGAAGAGGTTTTATTGTTTGAGGT
CGCATTGGTGATGAGGATTGGGTGTCCTGCTTGTTGGACTCACTCTTAAT
CCAAGAGTTGAGTGCGTTCTGCCCTTCGCGATGTCTGCTGCAAGGCTCGT
CGTTTAGCCGCAAAATGTTTGGGAGGGAAGGCATGACGGTTGCTCTTTGG
ACTATTACGTTGGCCTTCGGTAGCTGTGTCGTTTGAGGAAACGGTGCGGT
CTGGAAACTGCTTTTTACGAGTGAATGCCGCTTCAGGCAGATGAAGCAAT
CATTAATTAGAGGTGTGCGCCGGCTCGATCTTCTCGTTGTTCTGCTACGG
AGGACTGGTTATTGCTGGACAGCTAAGCATTTTCTCACCGTTGTTGTTGT
GGACCGGGCTGCATGATGCTGGTGCGCCACGCAGGTGGCAAGCGCGGGAC
GGCATGTTCCTCAACAACATCTCGGGGCATAACTCCATCATCAATGCCCT
CGCCGCCAACCACGAGAACGTGCTCGTCTCGGGTGGCGATAACGGCAGCA
TCTGCATGTGGGACTACGCCACAGGCAAGCGACATGACTGATTAGCTTTA
TAGAGAACAAGCGATGTAGTAAACCCCCAGGTGCTTTCTTTGTTCGCAGA
TCCGAGCCAAGGAAGGACAAAGGGGGGGGTCCAGGAAACAGTGAGCGTGT
TAAGTTGTCTGCTGCTGCCTAGGTCCAACTTGACGCCTTTTGCTCCCCTT
TCTCCTGTTGGTATCAAATTCTTGTGTTCCGTCCCATGTTGCCCCTCCTG
CTTTCTTCGTGCAGGGTACATGTTCCAGCGGCTGGAGACCATTGTGCAGC
CGGGCTCGATGGACGCCGAGGCCGGCATCTTCGCCACGTGCTTCGACGAG
TGCGTTTGTTTGGAGGAAATGCCATTTTTGCGGGGTTTCATTTGTTCCTC
TCACTCTGCTGACGTTGCGTGAACTTTGAATATGAGTGGTTTTGTGGTCA
GCGGCAGTGAGACTATTGCAGCAGAAGTTCAGAGCATTGATCTACCATCC
TGATATCACTTGACGTCATTCTTGACCACTTCCGTCTCCCTCGTTATCTG
CTTGCTGCCTGTCCACAGGTCCGGCCTGCGACTGGTGACGGGGGAGGCAG
ACAAGACCATCAAGATTTGGCGCGAGGACCTGACAGCCACGCCCGACTCG
CACCCCATCGACATGAAACGCTGGGTTAAGGACTTCCGAAACAGGAAGCG
CTGATTTTGGCGATGAGGGTTGCGCGCGACCAAGAAATGGGCAGCGAAAG
GGCCAAATTCCTTCCCGGTCTTGTCGCCGCCGCGCCTTGCTTAGGATGAT
GGGTGGTGACGGAGGCGTTGTTTGGGCCAGCAACGGGCGACGGCAAAGAG
TATGACAGGCGTCACGTAAAATTGGAAAAGCGTGTGCAAGGGGCACCTTC
CAACGTGGGCATCAATCTAACAAACAATCTAACCAGT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig652:214..3750+

>mRNA_P-wetherbeei_contig652.1.1 ID=mRNA_P-wetherbeei_contig652.1.1|Name=mRNA_P-wetherbeei_contig652.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=399bp|location=Sequence derived from alignment at P-wetherbeei_contig652:214..3750+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCACGAAGCAGCAGGTACACTGCCTCTCCGGCCACACGGACGCCGT
CGGGACCCTCGCTACCAACTCTGTCGACCCCCAGGTGATAACGGGGTCGT
TTGACAGCCAGGTGCGGCTGTGGGACCTGACGGCGGGCAAGTGCATGGCG
GTGCTCACAAACCACAAGAAGGCCGTGCGCGCCGTGCAGATGAACGCCAA
GGAGTTCAGCTTCGTCAGCGCCGCCGCTGACAACATGAAGCGGTGGCAAG
CGCGGGACGGCATGTTCCTCAACAACATCTCGGGGCATAACTCCATCATC
AATGCCCTCGCCGCCAACCACGAGAACGTGCTCGTCTCGGGTGGCGATAA
CGGCAGCATCTGCATGTGGGACTACGCCACAGGCAAGCGACATGACTGA
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