prot_P-wetherbeei_contig6503.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6503.1.1
Unique Nameprot_P-wetherbeei_contig6503.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length454
Homology
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BLAST of mRNA_P-wetherbeei_contig6503.1.1 vs. uniprot
Match: D8LMJ1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMJ1_ECTSI)

HSP 1 Score: 176 bits (447), Expect = 1.520e-44
Identity = 223/455 (49.01%), Postives = 284/455 (62.42%), Query Frame = 0 
Query:    2 KQLDFDTGTYFYRDAQNGQTFWDKPIKSKIVPVPASLPENPE---DNRKHARRARERNARLRAIALKRQIWDQQKKXXXXXXXXXXXXXVEGLWKEAERLAVLNGGEFNMSWQELGSIHLC-LFDF-EKRLGTKLVSLRLVGHSLTELPSAVGERCRSLTSLSLCANRLTVLPDSLCDLAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTELSHQVILDCNRLRQLPETLGLMQCKVLNVSXXXXXXXXHCIKAMRRLRRLLADDNGLQHLPSDIGESPSLTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHMVYPTAEVLAGGAEKVRQWCECRQRERARARRHTVVIAFQDILSQVASLELGPPQFFEADVAADIDHAANLYYAVVWEKFWEVILPRLELAWQAGAATPEAA 451
            K +D +TG +FY +   G+  WD+P++  + P+    P   E   D+ +H R+  ER +R + +A++R  +D+                V+GLW EAE+ A    G+F+++W+++ S+    +F F E+  GTK+V+LRLVG  LTE+P A+G+   SL SLSL +N L  +PD LCDL ALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                     G M+C+ LNVS        HC+K M RL ++ A                    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    MVYP  EV+  G ++VR WC  R  +R  AR+HT+V+A QDIL Q+    LG P FFE DV   ++   + +YA+V+E+FW+ +LP LE  WQ G A P  A
Sbjct:   34 KHVDPETGYWFYENLATGERHWDRPLEG-VAPLRPKSPRPDEKLVDDARHKRQRSERESRRKDMAIRRVQFDKLLLEEGKSAEIKEAERVQGLWDEAEQHAARKEGDFSLAWKQVPSVSESHIFGFPERNGGTKIVNLRLVGLGLTEVPGAIGQNLLSLKSLSLSSNALEEIPDGLCDLTALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-GRMKCRWLNVSNNKLAGLPHCLKDMPRLTKISAVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ-NDMVYPPKEVILQGCDRVRAWCYRRMHDRVIARQHTIVMAVQDILKQIHERGLGHPAFFEPDVEVGMNEGTDHFYALVYERFWDTMLPALEREWQTGTAAPRGA 485
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BLAST of mRNA_P-wetherbeei_contig6503.1.1 vs. uniprot
Match: A0A6H5KAI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAI0_9PHAE)

HSP 1 Score: 108 bits (271), Expect = 1.140e-21
Identity = 111/185 (60.00%), Postives = 134/185 (72.43%), Query Frame = 0 
Query:  267 MRRLRRLLADDNGLQHLPSDIGESPSLTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHMVYPTAEVLAGGAEKVRQWCECRQRERARARRHTVVIAFQDILSQVASLELGPPQFFEADVAADIDHAANLYYAVVWEKFWEVILPRLELAWQAGAATPEAA 451
            M RL ++ A +NGL+ LPSDIG+S SLTA   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    MVYP  E++  G ++VR WC  R  +R  AR+HT+V+  QDIL Q+    LG P FFE DV   ++   + +YA+V+E+FW+ +LP LE  WQ G A P  A
Sbjct:    1 MPRLTKISAVNNGLRSLPSDIGDSRSLTALHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ-NDMVYPPKEIILQGCDRVRAWCHRRMHDRVSARQHTIVMTVQDILKQIHERGLGHPAFFEPDVEVGMNEGTDHFYALVYERFWDTMLPALEREWQTGTAVPRGA 184
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BLAST of mRNA_P-wetherbeei_contig6503.1.1 vs. uniprot
Match: A0A7S4A2F7_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4A2F7_9STRA)

HSP 1 Score: 79.0 bits (193), Expect = 7.940e-12
Identity = 127/373 (34.05%), Postives = 159/373 (42.63%), Query Frame = 0 
Query:   92 WKEAERLAVLNGGEFNMSWQELGSIHLCLFDFEKRLGTKLVSLRLVGHSLTELPSAVGERCRSLTSLSLCANRLTVLPDSLCDLAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTELSHQVILDCNRLRQLPETLGLMQCKVLNVSXXXXXXXXHCIKAMRRLRRLLADD-----------------------NGLQHLPSDIGESPSLTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHMVYPTAEVLAGGAEKVRQWCECRQRERARARRHTVVIAFQDILSQVASLELGPPQFFEADVAADIDHAANLYYAVVWEKFWEVILPRLELAW 441
            W +A   A    GE NM  +  G     ++DF +  G  L +LR V H L   P   G+    LT L+L +NRLT LPDS+CDLA  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                    L  M C  L+ +         C+  M  L  L                           N ++ LP  I   P L +                                                      M YPT + L  GAE VR W   RQ++   AR+H VV   QD + Q    E+ P    +    A ++ +  +++ VVW+KFW+ +LP L  AW
Sbjct:  206 WGDAFEFA-REAGELNMLNKGAGDFPDQIYDFHENYGRPLKALRFVAHGLDRFPERAGKELTQLTQLTLASNRLTELPDSICDLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-LSRMTCHTLSFNHNKLVALPRCLANMINLTALSXXXXXXXXXXXXXXXXXXXXTVKLCANIIEELPESISRLPRLKSLWLDHNAPMAALPWNFYMLTSLVELRMDANPG----------------------MKYPTPDTLLQGAEAVRNWFRKRQKQALFARKHRVVATMQDFMEQCG--EVRPSIAHQGYFEAGVERSGAVWFQVVWDKFWDEMLPGLRDAW 552
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6503.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D8LMJ1_ECTSI1.520e-4449.01Hypothetical leucine rich repeat protein n=1 Tax=E... [more]
A0A6H5KAI0_9PHAE1.140e-2160.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S4A2F7_9STRA7.940e-1234.05Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00364LRR_bac_2coord: 290..309
e-value: 6.7
score: 15.1
coord: 175..194
e-value: 94.0
score: 6.3
coord: 198..217
e-value: 250.0
score: 3.0
coord: 152..171
e-value: 98.0
score: 6.1
coord: 244..263
e-value: 330.0
score: 2.1
NoneNo IPR availablePANTHERPTHR48051FAMILY NOT NAMEDcoord: 125..242
NoneNo IPR availablePANTHERPTHR48051:SF13LEUCINE-RICH REPEAT-CONTAINING 30Acoord: 125..242
NoneNo IPR availablePANTHERPTHR48051FAMILY NOT NAMEDcoord: 156..284
NoneNo IPR availablePANTHERPTHR48051:SF13LEUCINE-RICH REPEAT-CONTAINING 30Acoord: 230..353
NoneNo IPR availablePANTHERPTHR48051:SF13LEUCINE-RICH REPEAT-CONTAINING 30Acoord: 156..284
NoneNo IPR availablePANTHERPTHR48051FAMILY NOT NAMEDcoord: 230..353
NoneNo IPR availableSUPERFAMILY52058L domain-likecoord: 127..349
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 152..175
e-value: 17.0
score: 11.3
coord: 267..290
e-value: 8.3
score: 13.9
coord: 291..313
e-value: 8.2
score: 14.0
coord: 221..245
e-value: 44.0
score: 8.0
coord: 198..220
e-value: 3.4
score: 16.7
coord: 336..360
e-value: 400.0
score: 0.1
IPR001611Leucine-rich repeatPFAMPF13855LRR_8coord: 291..348
e-value: 2.0E-9
score: 37.0
coord: 130..188
e-value: 3.6E-8
score: 33.0
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 292..313
score: 7.473233
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 38..245
e-value: 6.6E-24
score: 86.0
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10Ribonuclease Inhibitorcoord: 246..351
e-value: 5.9E-25
score: 89.6

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6503contigP-wetherbeei_contig6503:733..3355 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6503.1.1mRNA_P-wetherbeei_contig6503.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6503 733..3355 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6503.1.1 ID=prot_P-wetherbeei_contig6503.1.1|Name=mRNA_P-wetherbeei_contig6503.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=454bp
MKQLDFDTGTYFYRDAQNGQTFWDKPIKSKIVPVPASLPENPEDNRKHAR
RARERNARLRAIALKRQIWDQQKKKEVEVSTSTATATVEGLWKEAERLAV
LNGGEFNMSWQELGSIHLCLFDFEKRLGTKLVSLRLVGHSLTELPSAVGE
RCRSLTSLSLCANRLTVLPDSLCDLAALTELNLLKNRLVTLPTRIGNLMV
LKRLHLSSNALTALPPSFGNLTELSHQVILDCNRLRQLPETLGLMQCKVL
NVSANRLVALPHCIKAMRRLRRLLADDNGLQHLPSDIGESPSLTALHLRR
NRISELPGSICQLRTLRVLLLDHNHMTGLPMEFHRLTALTRLMLEGNRHM
VYPTAEVLAGGAEKVRQWCECRQRERARARRHTVVIAFQDILSQVASLEL
GPPQFFEADVAADIDHAANLYYAVVWEKFWEVILPRLELAWQAGAATPEA
AAAA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR001611Leu-rich_rpt
IPR032675LRR_dom_sf