mRNA_P-wetherbeei_contig65.4.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig65.4.2
Unique NamemRNA_P-wetherbeei_contig65.4.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig65.4.2 vs. uniprot
Match: A0A835YRT7_9STRA (Sterol C-5 desaturase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRT7_9STRA)

HSP 1 Score: 369 bits (946), Expect = 2.700e-124
Identity = 177/262 (67.56%), Postives = 203/262 (77.48%), Query Frame = 1
Query:    1 RDFNVWVNSFLFPSAALLWADTAFGAYAAHFVVCYVRDLIAGSMLYYAVGLSWHVWVYKLPSSVKKGD---LPKRETVVDQIQLAQASMFLYASLPVFAEWLIEEGYTKTYYSVSEVGGVVPYVCWTALYVMGVEIGIYWMHRTLHTNKFLYKYVHALHHKYNDANTLSPWASVAFNPLDGILQASPYVALLLFMPVHYFTHMTMLFFTAVWATNIHDTLHGDTEPVMGSKYHLVHHTHYHWNYGQFFTFCDRYWGTLRRPE 777
            ++FN WVNS++ P A    AD A G YAAHFVV Y RDL+AGS++YY V   WH+++Y L       D   LP RET+VDQI LAQAS+F+YA LPV +EWLIEEGYT+ YYS+SEVGG   YV  T LY+  VEIGIYWMHR LHTNK LYKYVHALHHKYN A TL+PW SVAFNPLDGILQA PYV +L  +P HY TH+ MLFFTAVWATNIHD L GDTEP+MGSKYH +HHTHYH N+GQFF FCD +WGTLR P+
Sbjct:   45 KEFNQWVNSYIIPEAWTAAADEALGPYAAHFVVMYFRDLVAGSIMYYTVSGLWHLYIYHLKRDKFFPDGQLLPTRETIVDQIMLAQASLFMYAGLPVLSEWLIEEGYTRAYYSISEVGGWPQYVALTLLYLTLVEIGIYWMHRKLHTNKILYKYVHALHHKYNKAQTLTPWCSVAFNPLDGILQACPYVIMLFVVPCHYLTHVVMLFFTAVWATNIHDALDGDTEPIMGSKYHTMHHTHYHVNFGQFFVFCDWFWGTLRDPK 306          
BLAST of mRNA_P-wetherbeei_contig65.4.2 vs. uniprot
Match: D7FW86_ECTSI (Sterol C-5 desaturase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW86_ECTSI)

HSP 1 Score: 350 bits (899), Expect = 1.390e-117
Identity = 164/278 (58.99%), Postives = 206/278 (74.10%), Query Frame = 1
Query:    1 RDFNVWVNSFLFPSAALLWADTAFGAYAAHFVVCYVRDLIAGSMLYYAVGLSWHVWVY-KLPSSVKKGDLPKRETVVDQIQLAQASMFLYASLPVFAEWLIEEGYTKTYYSVSEVGGVVPYVCWTALYVMGVEIGIYWMHRTLHTNKFLYKYVHALHHKYNDANTLSPWASVAFNPLDGILQASPYVALLLFMPVHYFTHMTMLFFTAVWATNIHDTLHGDTEPVMGSKYHLVHHTHYHWNYGQFFTFCDRYWGTLRRPEDIRNY-RVPGAPARAKAT 828
            ++FN W+NSFLF    +  A  A GA AAH+ + YVR+ + GS+LYY     WH  +Y K+  ++    +P    + DQIQLAQ S  +YA LPV  E+ IEEGYT+ Y+  S+VGG++ YV +T +Y+  VEIGIYWMHRTLHTNKFLYKYVHALHHKYN   TLSPWAS+AFNPLDG+LQA PYV  L F+P HY+THM M  FTA+WATNIHD + G++EP+MG+KYH VHHTHYH N+GQFFTFCD+YWGTL+RP+D+R Y + P   A  KA+
Sbjct:   13 KEFNAWINSFLFSEGTIKTARDAMGAKAAHYFLTYVRNFLGGSILYYITAAMWHWVIYVKMGRTLFPKGMPAPAVIWDQIQLAQLSTTVYAMLPVLGEFFIEEGYTRCYFHFSDVGGLIGYVLYTVVYLTFVEIGIYWMHRTLHTNKFLYKYVHALHHKYNSPETLSPWASIAFNPLDGVLQACPYVICLFFIPCHYYTHMAMFMFTAIWATNIHDAVPGNSEPIMGAKYHTVHHTHYHVNFGQFFTFCDQYWGTLKRPQDMRGYSQEPSTDAAKKAS 290          
BLAST of mRNA_P-wetherbeei_contig65.4.2 vs. uniprot
Match: A0A7S2UWH0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWH0_9STRA)

HSP 1 Score: 344 bits (882), Expect = 1.990e-114
Identity = 164/269 (60.97%), Postives = 203/269 (75.46%), Query Frame = 1
Query:    1 RDFNVWVNSFLFPSAALLWADTAFGAYAAHFVVCYVRDLIAGSMLYYAVGLSWHVWVYKLPSS---VKKGDLPKRETVVDQIQLAQASMFLYASLPVFAEWLIEEGYTKTYYSVSEVGGVVPYVCWTALYVMGVEIGIYWMHRTLHTNKFLYKYVHALHHKYNDANTLSPWASVAFNPLDGILQASPYVALLLFMPVHYFTHMTMLFFTAVWATNIHDTLHGDTEPVMGSKYHLVHHTHYHWNYGQFFTFCDRYWGTLRRPEDIRNYRV 798
            R+FNVW+NSF F  A +  A+  FG    H +  YVRDL+AG ++YYAV L WH ++Y    +    ++G  PK E + DQ+ LAQ S+F+YA LPV ++ LIE GYT+ YYS+S+VGG   Y  + A Y++ VE GIYW+HRTLHTNKFLYK+VHALHHKYN   TLSPWAS+AFNP+DG+ QASPYVA L  +P HYFTH+ MLFFT VWATNIHDTLHG+TEPVMGSKYHLVHHTHYH+N+GQFF   D  +GTL+RPEDI+  + 
Sbjct:   55 REFNVWLNSFFFSKALMAKAEEKFGQLIGHIIFTYVRDLVAGFIVYYAVNLPWHWYIYIRHGNHFFPEEGSQPKWEVIWDQMLLAQCSLFVYAMLPVTSQLLIEYGYTRVYYSMSDVGGWQWYAAYMAAYLLFVEFGIYWVHRTLHTNKFLYKHVHALHHKYNKPTTLSPWASIAFNPVDGVAQASPYVAGLFLIPCHYFTHLAMLFFTGVWATNIHDTLHGNTEPVMGSKYHLVHHTHYHYNFGQFFILFDWLYGTLKRPEDIKKAKA 323          
BLAST of mRNA_P-wetherbeei_contig65.4.2 vs. uniprot
Match: A0A7S2GVH5_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GVH5_9STRA)

HSP 1 Score: 333 bits (855), Expect = 1.530e-110
Identity = 157/258 (60.85%), Postives = 191/258 (74.03%), Query Frame = 1
Query:    7 FNVWVNSFLFPSAALLWADTAFGAYAAHFVVCYVRDLIAGSMLYYAVGLSWHVWVYKLPSS---VKKG-DLPKRETVVDQIQLAQASMFLYASLPVFAEWLIEEGYTKTYYSVSEVGGVVPYVCWTALYVMGVEIGIYWMHRTLHTNKFLYKYVHALHHKYNDANTLSPWASVAFNPLDGILQASPYVALLLFMPVHYFTHMTMLFFTAVWATNIHDTLHGDTEPVMGSKYHLVHHTHYHWNYGQFFTFCDRYWGTLR 768
            FN WVN  LFPS  L   D+ FGA   ++ +CY+RDL A + LYY     WH+++Y +      V++G  +P  E + +QI +AQ S+F YA+LPVF+EWLIE  YT  Y+S+SE+GG   Y+ +TA+Y+  VEIGIYWMHRTLHTNKFLYKYVH LHHKYN    L+PWAS+AFNPLDGILQASPYV  L  +P HY TH+ MLFFTA+WATNIHD L G+TEP+MGSKYH +HHTHY  NYGQ F FCD YWGTLR
Sbjct:   49 FNNWVNHILFPSKILESTDSMFGAEWGYYAICYIRDLFAATFLYYTTAGIWHIYIYNIKGDQFFVQQGYPMPSTEIIREQIMVAQMSIFCYAALPVFSEWLIEHNYTLVYWSISEIGGWPQYLIFTAIYLSLVEIGIYWMHRTLHTNKFLYKYVHGLHHKYNKRQLLTPWASIAFNPLDGILQASPYVVALFLVPCHYLTHVAMLFFTAIWATNIHDALDGNTEPIMGSKYHTIHHTHYMVNYGQIFIFCDWYWGTLR 306          
BLAST of mRNA_P-wetherbeei_contig65.4.2 vs. uniprot
Match: A0A7S2WVE6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WVE6_9STRA)

HSP 1 Score: 333 bits (853), Expect = 4.760e-110
Identity = 160/268 (59.70%), Postives = 189/268 (70.52%), Query Frame = 1
Query:    7 FNVWVNSFLFPSAALLWADTAFGAYAAHFVVCYVRDLIAGSMLYYAVGLSWHVWVYKLPSS---VKKG-DLPKRETVVDQIQLAQASMFLYASLPVFAEWLIEEGYTKTYYSVSEVGGVVPYVCWTALYVMGVEIGIYWMHRTLHTNKFLYKYVHALHHKYNDANTLSPWASVAFNPLDGILQASPYVALLLFMPVHYFTHMTMLFFTAVWATNIHDTLHGDTEPVMGSKYHLVHHTHYHWNYGQFFTFCDRYWGTLRRPEDIRNYRV 798
            FN W+N  + P A L + +       AH+ V Y+RD +AG++LYY V   WH+W+Y +       K+G  +P RE ++DQIQLAQ SMF+YA LPVF+EWLIEEGYT  Y+S+ E+GG              VEIGIYWMHRTLHTNKFLYKYVH LHHKYN    LSPWASVAFNPLDGILQA PYV  L  +P HY TH+ MLFFTAVWATNIHD L G+TEP+MGSKYH  HHTHYH N+GQFF FCD +WGTL  P D R  ++
Sbjct:   60 FNQWINQMILPPAMLQYFEDRMTIKQAHYSVTYLRDFVAGTLLYYMVAGLWHLWIYHVRGERYFKKQGATMPSREIILDQIQLAQLSMFVYAGLPVFSEWLIEEGYTLAYWSIDEIGGWXXXXXXXXXXXXXVEIGIYWMHRTLHTNKFLYKYVHGLHHKYNKPELLSPWASVAFNPLDGILQACPYVICLFIVPCHYLTHVLMLFFTAVWATNIHDALDGNTEPIMGSKYHTKHHTHYHVNFGQFFIFCDWFWGTLSAPGDSRRMKL 327          
BLAST of mRNA_P-wetherbeei_contig65.4.2 vs. uniprot
Match: A0A6V1TBS5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1TBS5_HETAK)

HSP 1 Score: 329 bits (843), Expect = 1.110e-108
Identity = 151/275 (54.91%), Postives = 204/275 (74.18%), Query Frame = 1
Query:    1 RDFNVWVNSFLFPSAALLWADTAFGAYAAHFVVCYVRDLIAGSMLYYAVGLSWHVWVY-KLPSSVKKGDLPKRETVVDQIQLAQASMFLYASLPVFAEWLIEEGYTKTYYSVSEVGGVVPYVCWTALYVMGVEIGIYWMHRTLHTNKFLYKYVHALHHKYNDANTLSPWASVAFNPLDGILQASPYVALLLFMPVHYFTHMTMLFFTAVWATNIHDTLHGDTEPVMGSKYHLVHHTHYHWNYGQFFTFCDRYWGTLRRPEDIRNYRVPGAPARAK 822
            ++FN W+NSF++  + + + D   G    H  + Y RDLIAG + Y+ V   W  +VY        + + P RETV+DQ+++A  ++  YA+LPV ++  IE GYT+ YYS+++VGG+  Y+ +TA+Y+  VEIGIYWMHR LHTNKFLYK+VHALHHKYN  +TL+PWAS+AFNPLDG+LQA PY+    F+P HY TH+ +LFFTA+WATNIHDTL+GD+EP+MGSKYHL+HHTHYH N+GQFF FCD +WGTL+RPED+R+ +   A  + K
Sbjct:   43 KEFNRWLNSFIYSESLVDYCDKKLGETGGHIALTYFRDLIAGYITYFIVAAPWAYYVYIHGKGRFSEVEAPSRETVLDQVRMACVAVPAYATLPVASQLFIEGGYTRVYYSLADVGGLGGYLFFTAVYIAFVEIGIYWMHRVLHTNKFLYKHVHALHHKYNKPSTLTPWASIAFNPLDGLLQACPYLIATFFVPCHYLTHLILLFFTALWATNIHDTLNGDSEPIMGSKYHLIHHTHYHCNFGQFFIFCDWFWGTLKRPEDLRSRKAEAAEDKKK 317          
BLAST of mRNA_P-wetherbeei_contig65.4.2 vs. uniprot
Match: A0A7R9UEU8_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEU8_9STRA)

HSP 1 Score: 326 bits (836), Expect = 2.840e-107
Identity = 152/270 (56.30%), Postives = 193/270 (71.48%), Query Frame = 1
Query:    1 RDFNVWVNSFLFPSAALLWADTAFGAYAAHFVVCYVRDLIAGSMLYYAVGLSWHVWVYK-LPSSVKKGD---LPKRETVVDQIQLAQASMFLYASLPVFAEWLIEEGYTKTYYSVSEVGGVVPYVCWTALYVMGVEIGIYWMHRTLHTNKFLYKYVHALHHKYNDANTLSPWASVAFNPLDGILQASPYVALLLFMPVHYFTHMTMLFFTAVWATNIHDTLHGDTEPVMGSKYHLVHHTHYHWNYGQFFTFCDRYWGTLRRPEDIRNYRV 798
            R  N  +N   F  A     +  FG    +++V Y+RDLIAG ++YY     WH+ +Y  L   + KG    +P   T+ DQI LAQAS+F YA+LPVF+ WL+E GYT+ Y+ V E+GG   Y+ WT  Y + VEIGIYW+HRTLHTNKFLYKYVHALHHKYN A TLSPWAS+AFNPLDGI QASPYV  +  +P HY TH+ MLFFT +W+TNIHD + G+ EP+MG+KYH VHHTHYH+N+GQ F +CD++WGTL+ PE+IR  R+
Sbjct:   69 RALNDLINGIFFSEATRRGFEERFGEELGYYMVTYLRDLIAGILVYYIAAGVWHIMIYHVLRERIFKGQEDQIPTAATIWDQICLAQASVFCYAALPVFSSWLVENGYTRAYFYVDEIGGWSNYLAWTVAYFVLVEIGIYWVHRTLHTNKFLYKYVHALHHKYNSAATLSPWASIAFNPLDGIAQASPYVVAMFLVPCHYITHLLMLFFTGIWSTNIHDAVPGNIEPIMGAKYHTVHHTHYHYNFGQIFIYCDKFWGTLKTPEEIRQLRM 338          
BLAST of mRNA_P-wetherbeei_contig65.4.2 vs. uniprot
Match: A0A4D9D2S1_9STRA (Fatty acid hydroxylase domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D2S1_9STRA)

HSP 1 Score: 325 bits (834), Expect = 8.460e-107
Identity = 158/261 (60.54%), Postives = 191/261 (73.18%), Query Frame = 1
Query:    7 FNVWVNSFLFPSAALLWADTAFGAYAAHFVVCYVRDLIAGSMLYYAVGLSWHVWVYKLPSS---VKKG-DLPKRETVVDQIQLAQASMFLYASLPVFAEWLIEEGYTKTYYSVSEVGGVVPYVCWTALYVMGVEIGIYWMHRTLHTNKFLYKYVHALHHKYNDANTLSPWASVAFNPLDGILQASPYVALLLFMPVHYFTHMTMLFFTAVWATNIHDTLHGDTEPVMGSKYHLVHHTHYHWNYGQFFTFCDRYWGTLRRPE 777
            FN WVN+FLF  A         G   AH+ + YVRDL+AGS+LYY     WH +VY+        ++G + P   T+ DQIQLAQ SMFLYA+LPV AEWL+E G+T+ YY V E+GG   Y+ +T LY+  VE+G+YWMHRTLH NK LYKY+H LHHKYN  +TLSPWASVAFNP+DGILQASPYV  L  +P HY TH+ M+FFTAVWATNIHD + G+TEPVMGSKYH +HHTHYH+N+GQFF F D  +GTLR PE
Sbjct:   64 FNDWVNAFLFSDAVKADVMARLGPAGAHYFLTYVRDLVAGSVLYYLTAGLWHTYVYQWHGDYFFTQQGFEKPSAATIKDQIQLAQTSMFLYAALPVLAEWLVESGWTQCYYYVEEIGGWPYYLAFTLLYLAMVEVGVYWMHRTLHENKVLYKYIHGLHHKYNKPSTLSPWASVAFNPIDGILQASPYVICLFLVPCHYLTHVAMVFFTAVWATNIHDAMDGNTEPVMGSKYHTMHHTHYHYNFGQFFIFADWMFGTLRVPE 324          
BLAST of mRNA_P-wetherbeei_contig65.4.2 vs. uniprot
Match: A0A482SVV9_9ARCH (Fatty acid hydroxylase family protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SVV9_9ARCH)

HSP 1 Score: 315 bits (806), Expect = 3.090e-103
Identity = 152/267 (56.93%), Postives = 192/267 (71.91%), Query Frame = 1
Query:    1 RDFNVWVNSFLFP----SAALLWADTAFGAYAAHFVVCYVRDLIAGSMLYYAVGLSWHVWVYKLPSSV----KKGDLPKRETVVDQIQLAQASMFLYASLPVFAEWLIEEGYTKTYYSVSEVGGVVPYVCWTALYVMGVEIGIYWMHRTLHTNKFLYKYVHALHHKYNDANTLSPWASVAFNPLDGILQASPYVALLLFMPVHYFTHMTMLFFTAVWATNIHDTLHGDTEPVMGSKYHLVHHTHYHWNYGQFFTFCDRYWGTLRRPE 777
            R+FN W+N   F       A  +   + G  + ++  CY+RDLI G+ +Y+     WHV +Y + +      K   LP  ET+VDQ+ LAQAS+F+YA LP+ +E+LIE G T TY+ VS++GG   Y  +  LY+  VEIG+YWMHRTLHTNKFLYKYVH LHHKYN   TL+PWAS+AFNPLDGILQASPYV  L F+PVHYFTH+ +LFF+ VWATNIHD + GD+EP+MGSKYH +HHTHY +NYGQFF FCD ++GTLR PE
Sbjct:   36 RNFNHWLNGHFFRLFKLEGAAQYLHDSLGEESGYYAQCYLRDLIGGTFVYWVTAGVWHVVIYYIFADKFFHSKGRPLPTTETLVDQMSLAQASLFVYAGLPILSEYLIESGVTHTYFYVSDIGGWGWYTAYLVLYITLVEIGVYWMHRTLHTNKFLYKYVHGLHHKYNKLTTLTPWASIAFNPLDGILQASPYVVCLFFVPVHYFTHIFLLFFSGVWATNIHDAMWGDSEPIMGSKYHTLHHTHYLYNYGQFFIFCDWFFGTLRVPE 302          
BLAST of mRNA_P-wetherbeei_contig65.4.2 vs. uniprot
Match: A0A6U4L1I3_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4L1I3_9STRA)

HSP 1 Score: 315 bits (808), Expect = 9.990e-103
Identity = 150/265 (56.60%), Postives = 188/265 (70.94%), Query Frame = 1
Query:    1 RDFNVWVNSFLFPSAALLWADTAFGAYAAHFVVCYVRDLIAGSMLYYAVGLSWHVWVYK-LPSSVKKG---DLPKRETVVDQIQLAQASMFLYASLPVFAEWLIEEGYTKTYYSVSEVGGVVPYVCWTALYVMGVEIGIYWMHRTLHTNKFLYKYVHALHHKYNDANTLSPWASVAFNPLDGILQASPYVALLLFMPVHYFTHMTMLFFTAVWATNIHDTLHGDTEPVMGSKYHLVHHTHYHWNYGQFFTFCDRYWGTLRRPEDI 783
            R+ N  +NS LF  A     +  FG    +++  Y+RDL  G +LYY     WH+ +Y  +   + KG    +P R  +VDQI LAQAS+F YA+LPVF+ WL+E  YT  Y+ + ++GG   Y+  TA Y   VEIGIYWMHRTLHTNKFLYK+VH LHHKYN   TLSPWAS+AFNPLDGI QASPYV ++LF+P HY TH+ MLFFT +WATNIHD + GDTEP+MG+KYH +HHTH+  NYGQ FTFCD++WGTL+  EDI
Sbjct:   77 RELNDLINSLLFNEAQRRGFEERFGYETGYYLCTYLRDLFFGCLLYYLTAGLWHIAIYHVMRERLFKGREDKMPSRAVIVDQICLAQASLFCYAALPVFSSWLVENNYTAAYFYIDDIGGWANYLAITAFYFALVEIGIYWMHRTLHTNKFLYKWVHGLHHKYNSHATLSPWASIAFNPLDGIAQASPYVFVMLFVPCHYLTHLIMLFFTGIWATNIHDAIDGDTEPIMGAKYHTIHHTHFSCNYGQIFTFCDQFWGTLKTREDI 341          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig65.4.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YRT7_9STRA2.700e-12467.56Sterol C-5 desaturase n=1 Tax=Tribonema minus TaxI... [more]
D7FW86_ECTSI1.390e-11758.99Sterol C-5 desaturase n=2 Tax=Ectocarpus TaxID=287... [more]
A0A7S2UWH0_9STRA1.990e-11460.97Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2GVH5_9STRA1.530e-11060.85Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2WVE6_9STRA4.760e-11059.70Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6V1TBS5_HETAK1.110e-10854.91Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7R9UEU8_9STRA2.840e-10756.30Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A4D9D2S1_9STRA8.460e-10760.54Fatty acid hydroxylase domain-containing protein n... [more]
A0A482SVV9_9ARCH3.090e-10356.93Fatty acid hydroxylase family protein n=1 Tax=arch... [more]
A0A6U4L1I3_9STRA9.990e-10356.60Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig65contigP-wetherbeei_contig65:2097..4060 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FW86
Preferred nameSC5D
PFAMsFA_hydroxylase
Model size1047
Max annot lvl2759|Eukaryota
KEGG rclassRC00904
KEGG koko:K00227
KEGG ReactionR07215,R07486,R07491,R07505
KEGG Pathwayko00100,ko01100,ko01110,ko01130,map00100,map01100,map01110,map01130
KEGG ModuleM00101,M00102
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0000248,GO:0003674,GO:0003824,GO:0005488,GO:0005506,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005788,GO:0005789,GO:0005794,GO:0006066,GO:0006082,GO:0006629,GO:0006631,GO:0006694,GO:0006695,GO:0006696,GO:0008150,GO:0008152,GO:0008202,GO:0008203,GO:0008204,GO:0008610,GO:0009058,GO:0009889,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016125,GO:0016126,GO:0016128,GO:0016129,GO:0016491,GO:0016705,GO:0016717,GO:0019216,GO:0019218,GO:0019222,GO:0019752,GO:0030176,GO:0031090,GO:0031224,GO:0031227,GO:0031974,GO:0031984,GO:0032787,GO:0033489,GO:0033490,GO:0042175,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043436,GO:0044107,GO:0044108,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045540,GO:0046165,GO:0046872,GO:0046890,GO:0046914,GO:0046996,GO:0050046,GO:0050789,GO:0050810,GO:0055114,GO:0062012,GO:0065007,GO:0070013,GO:0070704,GO:0071704,GO:0080090,GO:0090181,GO:0097384,GO:0098588,GO:0098791,GO:0098827,GO:0106118,GO:1901360,GO:1901362,GO:1901576,GO:1901615,GO:1901617,GO:1902652,GO:1902653,GO:1902930
Exons4
Evalue8.83e-103
EggNOG OGsCOG3000@1|root,KOG0872@2759|Eukaryota
Ec32 ortholog descriptionSterol C-5 desaturase
Ec32 orthologEc-01_003780.1
EC1.14.19.20
DescriptionC-5 sterol desaturase activity
Cds size702
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig65.4.2prot_P-wetherbeei_contig65.4.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig65 2313..3931 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186917.972791-UTR-P-wetherbeei_contig65:2096..23121683186917.972791-UTR-P-wetherbeei_contig65:2096..2312Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig65 2097..2312 -
1683186918.0161188-UTR-P-wetherbeei_contig65:3931..40601683186918.0161188-UTR-P-wetherbeei_contig65:3931..4060Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig65 3932..4060 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186917.9832952-CDS-P-wetherbeei_contig65:2312..26521683186917.9832952-CDS-P-wetherbeei_contig65:2312..2652Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig65 2313..2652 -
1683186917.991537-CDS-P-wetherbeei_contig65:3073..32461683186917.991537-CDS-P-wetherbeei_contig65:3073..3246Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig65 3074..3246 -
1683186917.9996865-CDS-P-wetherbeei_contig65:3623..37221683186917.9996865-CDS-P-wetherbeei_contig65:3623..3722Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig65 3624..3722 -
1683186918.0077436-CDS-P-wetherbeei_contig65:3841..39311683186918.0077436-CDS-P-wetherbeei_contig65:3841..3931Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig65 3842..3931 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig65.4.2

>prot_P-wetherbeei_contig65.4.2 ID=prot_P-wetherbeei_contig65.4.2|Name=mRNA_P-wetherbeei_contig65.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=234bp
MLYYAVGLSWHVWVYKLPSSVKKGDLPKRETVVDQIQLAQASMFLYASLP
VFAEWLIEEGYTKTYYSVSEVGGVVPYVCWTALYVMGVEIGIYWMHRTLH
TNKFLYKYVHALHHKYNDANTLSPWASVAFNPLDGILQASPYVALLLFMP
VHYFTHMTMLFFTAVWATNIHDTLHGDTEPVMGSKYHLVHHTHYHWNYGQ
FFTFCDRYWGTLRRPEDIRNYRVPGAPARAKAT*
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mRNA from alignment at P-wetherbeei_contig65:2097..4060-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig65.4.2 ID=mRNA_P-wetherbeei_contig65.4.2|Name=mRNA_P-wetherbeei_contig65.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1964bp|location=Sequence derived from alignment at P-wetherbeei_contig65:2097..4060- (Phaeothamnion wetherbeei SAG_119_79)
CGAGACTTTAACGTCTGGGTGAACTCTTTTCTCTTTCCCTCGGCCGCGCT CCTGTGGGCCGACACTGCATTTGGCGCTTATGCGGCCCATTTCGTCGTTT GCTACGTTCGGGACCTCATCGCGGGCTCGATGCTCTACTACGCCGTGGGT CTCTCGTGGCACGTCTGGGTCTACAAGCTGCCGTCCTCCGTGAAAAAGGG AGACTTGCCCAAACGAGAGGTACGTTAACAATCCAGCCTCGCCAAAGACG AGCTCGTGTTGGAAAGGCGGAAAGGTTTTCTAAGTCGTATCATCGATTGA CTCTGTTTCCTTCCCTTTGCACTGCGTTATTCCGGCAGACGGTTGTGGAC CAGATACAGCTCGCTCAAGCGTCCATGTTTTTGTATGCGAGCTTGCCCGT CTTCGCTGAGTGGTTGATAGAAGAGGGCTACACAAAGGTGAGAAGGAAAC TTTTGTGGCTTCGGAGGAAGTTTATAGGGCCTTTAAGTGTTGGAGCGTTG CTGTCTTACGGAGTATAAGACGAGCCAAGGGTTCCTGCCGCACAGCCACC ATGGCAGAATTCGATAAAAAGTGCAGACGTCAAGTGTTTCATTTCTGACC GGACAGGCGTCAATTTGGAATTTGAATTTCGCAAACGTTGAGCATATATG GCGGCAGACTCCCGGCAGCTAGATGTGTTATATCGTTTTTCTCTTCACGC TGCCTGTTATCCCTTTCACCCTGCAGAAGGTTTCTGATGTCGGGGAACAA AAAGAAAAGGCTTTCATCGCTTCCTCGACCTTTCCGCCTCCTGCTCCTGG CCCGGCACGTGCAGACGTACTACAGTGTGTCAGAAGTTGGAGGAGTGGTG CCGTACGTGTGCTGGACGGCGCTGTATGTGATGGGGGTGGAAATTGGCAT CTACTGGATGCACCGGACGCTCCACACAAACAAGTTTCTATACAAGTATG TCCACGCCCTGCACCACAAGTACAACGACGCTAACACGTGAGTCGGAAGA TTAACCTGTCAGGAGGTTCATTGAACCGCTAAGGATTGAAGTTCATCTGG ATTGTCTTCTGCTACTGTCCGCAGATTTCCTTTCAATGTGGCGCGACGGG AACATTCATTTTAAAGATATCGTGTTAACGGCTCTTTCCTTTATTGACAT CGATTTCATCAACGCGCCGCTGTTTCATCAGGAGTTGATCACGTCAGCCT GTTTTCATCAGCCTGTTTTCAGCAGCATTGTTTTTTTGTGTTCAATCCCA CAGTCTGATCTTGGTTTTTTGCTTTCTTGTCCGATGATGCCCTTTCTCCC TCGGGCGACGCCTTGCCGTCGCTGGCCGCAACGTTTTGAACTTAAACACA ACTCTGCAACGAACGGAAACAAAACGGAATGAAACGGAACGGAAACGGAA ACGGGCAGGCTGTCGCCATGGGCATCGGTGGCCTTCAACCCGCTGGACGG AATCCTGCAGGCGAGCCCGTACGTGGCGCTGCTGCTGTTCATGCCGGTGC ACTACTTCACGCACATGACAATGCTCTTCTTCACGGCCGTATGGGCGACT AACATTCACGACACGCTGCACGGCGACACGGAGCCCGTCATGGGCAGCAA GTACCACCTGGTCCACCACACCCACTACCACTGGAACTATGGACAGTTCT TCACCTTCTGCGACCGCTACTGGGGCACGCTGCGCCGCCCCGAGGACATC CGCAACTACCGCGTCCCCGGCGCCCCCGCCCGTGCCAAAGCCACATGAAA AGTGTACCTGCCGTGACCCAGAGCTGGTCTGACTGTGTTTCGAAGGCGAT CGGAGCGGCCGAAGAGGCGGGAGCTGAGCGGTGCAGCACACAACGCCGGG TGATGTCAGAGAGCGTTGTCGTTTCAAAGTCTTTGAAGGGAGCGGCGGCC AGCTGTGAGCGAAACGGTGCAGCCACAGCTGCCCAGCGACAAGTATAGTG TTGACCAAATGCGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig65:2097..4060-

>mRNA_P-wetherbeei_contig65.4.2 ID=mRNA_P-wetherbeei_contig65.4.2|Name=mRNA_P-wetherbeei_contig65.4.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=702bp|location=Sequence derived from alignment at P-wetherbeei_contig65:2097..4060- (Phaeothamnion wetherbeei SAG_119_79)
ATGCTCTACTACGCCGTGGGTCTCTCGTGGCACGTCTGGGTCTACAAGCT
GCCGTCCTCCGTGAAAAAGGGAGACTTGCCCAAACGAGAGACGGTTGTGG
ACCAGATACAGCTCGCTCAAGCGTCCATGTTTTTGTATGCGAGCTTGCCC
GTCTTCGCTGAGTGGTTGATAGAAGAGGGCTACACAAAGACGTACTACAG
TGTGTCAGAAGTTGGAGGAGTGGTGCCGTACGTGTGCTGGACGGCGCTGT
ATGTGATGGGGGTGGAAATTGGCATCTACTGGATGCACCGGACGCTCCAC
ACAAACAAGTTTCTATACAAGTATGTCCACGCCCTGCACCACAAGTACAA
CGACGCTAACACGCTGTCGCCATGGGCATCGGTGGCCTTCAACCCGCTGG
ACGGAATCCTGCAGGCGAGCCCGTACGTGGCGCTGCTGCTGTTCATGCCG
GTGCACTACTTCACGCACATGACAATGCTCTTCTTCACGGCCGTATGGGC
GACTAACATTCACGACACGCTGCACGGCGACACGGAGCCCGTCATGGGCA
GCAAGTACCACCTGGTCCACCACACCCACTACCACTGGAACTATGGACAG
TTCTTCACCTTCTGCGACCGCTACTGGGGCACGCTGCGCCGCCCCGAGGA
CATCCGCAACTACCGCGTCCCCGGCGCCCCCGCCCGTGCCAAAGCCACAT
GA
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