mRNA_P-wetherbeei_contig6493.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6493.1.3
Unique NamemRNA_P-wetherbeei_contig6493.1.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6493.1.3 vs. uniprot
Match: D7FIB5_ECTSI (Hypothetical leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIB5_ECTSI)

HSP 1 Score: 209 bits (532), Expect = 1.270e-61
Identity = 125/261 (47.89%), Postives = 171/261 (65.52%), Query Frame = 1
Query:   88 GAPLETKMQGFEANTAGLLSYLQYKDRRRALKTELQQKLRLSLYREVAGTPLGHEVLPPLAKAACRRFRGVNDLKQLVRHCDRLFPADLAACGGGNGSAEADRMHARFVALQRQNERKMLSAELELKIRAIYYDRIDDLTAVEGYIRDVYAAVPLLEDVQFLIQHAPKLFPAEARDISGPAVAAAMAALQRQLTAARAACIAALGAALAALYGER-GPRVEALADGVAAHFAHG-RFANEKELECLRKLTADAAGIFPADL 864
            GAPL+ KM+ F+ NT GL++YL+ +D R+ +K EL  KL   LYREV  +P G  +  PL KA C  F  + +L Q+ RHCDRLFP DLA  GG + +A A  +  +F  L R+NERK L+++LELK+RAIYYD ID   AVEGYI  +Y  V LLEDVQFL++HA  + P + ++I+G  V ++M ALQ+ +T AR  C+  L   L  +Y ++   +V  L   VA  FA G RFA+ KELE L++L ADA  +FPA++
Sbjct:  111 GAPLKAKMKFFQRNTKGLMAYLRERDARKHIKVELYNKLSTGLYREVLDSPTGRHI-HPLIKAVCLAFNDLQELTQVARHCDRLFPEDLAT-GGIDPTAAASTLREKFTVLGRKNERKRLASQLELKMRAIYYDVIDP-AAVEGYIASIYQQVELLEDVQFLVRHAGTVMPPDPKEITGIGVKSSMLALQKDMTEARQRCVDGLFETLTQIYNDQESSKVRRLTQRVADVFAKGSRFADAKELEELKQLKADAQRVFPAEI 368          
BLAST of mRNA_P-wetherbeei_contig6493.1.3 vs. uniprot
Match: A0A7S2RGP1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RGP1_9STRA)

HSP 1 Score: 188 bits (477), Expect = 5.000e-53
Identity = 133/300 (44.33%), Postives = 181/300 (60.33%), Query Frame = 1
Query:    7 LDVRDTLLRTLPREISRLPMLFTVDVRGAPLETKM---------QGFEANTAGLLSYLQYKDRRRALKTELQQKLRLSLYREVAGTPLGHEVLPPLAKAACRRFRGVNDLKQLVRHCDRLFPADLAACGGGNGSAEADRMHARFVALQRQNERKMLSAELELKIRAIYYDRIDDLTAVEGYIRDVYAA-----VPL-LEDVQFLIQHAPKLFPAEARDISGPAVAAAMAALQRQLTAARAACIAALGAALA-ALYGERGPR-VEALADGVAAHFAHGRFANEKELECLRKLTADAAGIFP 855
            LDVR T L TLP+E+ RL  L  + +   P + ++         +G   +T  L++ L+ +DRR +LK  LQ K+   +YRE A +P G E++P L +A    F  +++L+ +VR+CDRLFPA+L+A    N    A R+  +FV L+R+N RK LS ELELK+RAIYYD I+  T VEG IR VY        PL LED+QFLI++AP+LFP +  DI+GP V  A+  LQ QL   R   +  L  AL+ +LY +R P  V  LA  V   F   RFA +KELE ++KL ADAA  FP
Sbjct:  104 LDVRRTALATLPKELGRLTHLLEILLEDTPFQQQVLRGDQGGAKRGRVLDTEELVAELERQDRRESLKQNLQDKISGGIYREEADSPEGQELIPALVEAVSIEFSDLDELRNVVRNCDRLFPAELSAAR--NARRAARRLKEKFVTLRRENARKKLSTELELKLRAIYYDVIEP-TEVEGVIRAVYEGDWTVEKPLELEDLQFLIKNAPRLFPEKPGDITGPGVRKAVWDLQDQLIRDRNEVVDKLFQALSHSLYSDREPALVRELAVNVGKLFERDRFATKKELEEMKKLAADAAQHFP 400          
BLAST of mRNA_P-wetherbeei_contig6493.1.3 vs. uniprot
Match: A0A7S2UUH4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UUH4_9STRA)

HSP 1 Score: 185 bits (469), Expect = 9.680e-52
Identity = 124/261 (47.51%), Postives = 162/261 (62.07%), Query Frame = 1
Query:   85 RGAPLETKMQGFEANTAGLLSYLQYKDRRRALKTELQQKLRLSLYREVAGTPLGHEVLPPLAKAACRRFRGVNDLKQLVRHCDRLFPADLA-ACGGGNGSAEADRMHARFVALQRQNERKMLSAELELKIRAIYYDRIDDLTAVEGYIRDVYAAVPLLEDVQFLIQHAPKLFPAEARDISGPAVAAAMAALQRQLTAARAACIAALGAALAALYGERGP-RVEALADGVAAHFAHGRFANEKELECLRKLTADAAGIFPAD 861
            RG PL+ K+ GF  +T GL+ YL+ KD R+  K EL   L   LYRE A T  G  +L  L KA    FR + +L+ LVR+ +RLFPADL  A       AE  R   RF  L+++N+ K LSA+LELK+R IYYDR++ L+ VE YIRD+Y  +  +EDVQFLI++AP L P  A DI G  V  AM  LQ +LTAAR A    L  +L+++Y +R P +V  L  GVA  F   RF  +KE E L+KL+ADA  +FPA+
Sbjct:  159 RGTPLKQKLVGFTEDTDGLMEYLRVKDARKTYKLELTDALNRGLYRETADTAEGKLLLTALVKAISLEFRDLEELRNLVRNSERLFPADLQKARYPQKAVAEVRR---RFSELKKKNQMKKLSADLELKLRVIYYDRLE-LSEVEIYIRDIYDHMTQVEDVQFLIKYAPSLLPPNAEDIDGAEVKQAMLRLQDELTAARKAVEENLFQSLSSVYSDREPSQVRELMLGVAKLFQRERFCTKKEEEELKKLSADAPMLFPAE 415          
BLAST of mRNA_P-wetherbeei_contig6493.1.3 vs. uniprot
Match: A0A7S2BKK2_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2BKK2_9STRA)

HSP 1 Score: 177 bits (449), Expect = 1.220e-49
Identity = 118/294 (40.14%), Postives = 179/294 (60.88%), Query Frame = 1
Query:    1 KVLDVRDTLLRTLPREISRLPMLFTVDVRGAPL-ETKMQGFEANTAGLLSYLQYKDRRRALKTELQQKLRLSLYREVAGTPLGHEVLPPLAKAACRRFRGVNDLKQLVRHCDRLFPADLAACGGGNGSAEADRMHARFVALQRQNERKMLSAELELKIRAIYYDRIDDLTAVEGYIRDVYAAV----PL-LEDVQFLIQHAPKLFPAEARDISGPAVAAAMAALQRQLTAARAACIAALGAALAALYGERGPR-VEALADGVAAHFAHGRFANEKELECLRKLTADAAGIFPAD 861
            +V+D+R T +  +P EI RL  L ++D+R  P  +      E +T GL++ L  KD R + + ++ +K+   +YRE + +  G  ++  L  A CR+F  ++DL+ +VR+CDRLFP +L+     +    A ++  RF+ L+R+NE+K LSAELE+K+RAIYYD I     VEG I  +Y A     PL LED+QF+I++A  LFP + + I+G  +   + +LQ +LT+ R   +  L  A+ +LY +R    V ALA  VA  F   RFA +KELE +RKL+ADAA  FPA+
Sbjct:   44 EVMDLRRTRISDVPSEIGRLQRLISIDLRDTPFAKDNCVSGEVDTKGLMATLAEKDTRESYREQMVKKVSSGVYREKSDSEAGKHLIGLLVSAVCRQFEDLDDLRNVVRNCDRLFPPELSKVER-DPERSAKKIQDRFLQLRRENEKKQLSAELEIKLRAIYYDVIAP-EKVEGIIASIYQAQKGERPLKLEDIQFMIRNASLLFPTDPKSITGILIRNNVWSLQDKLTSEREDVVLKLNTAIVSLYSDRSSEEVMALARSVAKTFQISRFATKKELEEMRKLSADAAQHFPAE 335          
BLAST of mRNA_P-wetherbeei_contig6493.1.3 vs. uniprot
Match: A0A8J2SN79_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SN79_9STRA)

HSP 1 Score: 144 bits (363), Expect = 3.080e-36
Identity = 104/262 (39.69%), Postives = 147/262 (56.11%), Query Frame = 1
Query:  127 NTAGLLSYLQYKDRRRALKTELQQKLRLSLYREVAGTPLGHEVLPPLAKAACRRFRGVNDLKQLVRHCDRLFPADLAACGGGNGSAEADRMHARFVALQRQNERKMLSAELELKIRAIYYDRIDDLTAVEGYIRDVYA---------------AVPL-LEDVQFLIQHAPKLFPAEARDISGPAVAAAMAALQRQLTAARAACIAALGAALAALYGE-RGPRVEALADGVAAHFAHGRFANEKELECLRKLTADAAGIFPAD 861
            +T  L+++L   D+R  L+  L +K    +Y E+A  P   + +  L  A    F    ++K +VRHCDRL P D ++    N +A   R+ A+FVAL+R NE+K L AELELK+RA+YYD ID  T VE YI+ +Y                 +PL LED+QFLI++AP+L P   ++I+G  V AA+  LQ++L   R  C+ A+  AL  LY +   P V  L       F   RFA +KEL  L+KL ADA+ +FP D
Sbjct:  165 DTPKLVAHLDLMDKRATLREALFEKACAGVYLEIADDPAHRDRISMLVDAIADAFPLPAEMKNVVRHCDRLMPKDPSSDFPKNHAA---RIRAKFVALRRDNEKKKLQAELELKMRALYYDVIDP-THVEKYIKAIYQDPRKLEERPEDASGDELPLELEDIQFLIKNAPRLLPKTPKEITGHGVRAAVWRLQQELRDEREKCVRAVCGALKTLYADTEPPLVLKLGRDTCKLFERDRFATKKELAELKKLAADASALFPTD 422          
BLAST of mRNA_P-wetherbeei_contig6493.1.3 vs. uniprot
Match: A0A6G0XC80_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XC80_9STRA)

HSP 1 Score: 140 bits (354), Expect = 6.380e-34
Identity = 100/275 (36.36%), Postives = 155/275 (56.36%), Query Frame = 1
Query:   94 PLETKMQGF-----EANTAGLLSYLQYKDRRRALKTELQQKLRLSLYREVAGTPLGHEVLPPLAKAACRRFRGVNDLKQLVRHCDRLFPADLAACGGGNGSAEADRMHARFVALQRQNERKMLSAELELKIRAIYYDRIDDLTAVEGYIRDVYAAVPLLEDVQFLIQHAPKLFPAEARDISGPAVAAAMAALQRQLTAARAACIAALGAALAALYGERGP-RVEALADGVAAHFAHGRFANEKELECLRKLTADAAGIFPADLXXXXXAAVAAVF 900
            PL  K+Q       +   A  L+YL+ KD RRALK  L  KL+  +Y E A +  G E++  L K   + FR  +++K L+RH DRLFP DLA       +A A R  A ++ ++ +N++K L+A+LELKIR IY+DRID ++ VE  +  +Y+ +  L+D++FL+++A +LFP  A D+ GP +   +  LQ  +   RAA +  +  A+A++Y +  P ++ AL   VA  F        K ++ L+ L ADAA  FP +      A + A F
Sbjct:  114 PLRPKLQSAAMADPDKICANTLAYLRRKDVRRALKQTLLDKLKDGIYLESADSNQGVEMIQTLMKHVLKEFRTEDEVKGLIRHADRLFPRDLAKAHQPTATAAAVR--ASYLEIKSENDKKKLAADLELKIRNIYFDRID-VSKVEPMVASIYSEIKSLQDIKFLLRYATQLFPPSAADVDGPTLRQKLKDLQDDMARERAAAVEKVVHAVASIYSDVEPDKIHALVAQVAPLF--------KNVQDLKTLAADAALHFPTEFLNASAAEIRASF 377          
BLAST of mRNA_P-wetherbeei_contig6493.1.3 vs. uniprot
Match: K3X410_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X410_GLOUD)

HSP 1 Score: 132 bits (332), Expect = 4.030e-32
Identity = 107/322 (33.23%), Postives = 163/322 (50.62%), Query Frame = 1
Query:    1 KVLDVRDTLLRTLPREISRLPMLFTVDVRGAPLETKM--QGFEANTAG------------------LLSYLQYKDRRRALKTELQQKLRLSLYREVAGTPLGHEVLPPLAKAACRRFRGVNDLKQLVRHCDRLFPA-DLAACGGGNGSAEADRMHARFVALQRQNERKMLSAELELKIRAIYYDRIDDLTAVEGYIRDVYAAVPLLEDVQFLIQHAPKLFPAEARDISGPAVAAAMAALQRQLTAARAACIAALGAALAALYGERGP-RVEALADGVAAHFAHGRFANEKELECLRKLTADAAGIFPADLXXXXXAAVAAVF 900
            +VLDV  T +  LP E  RL  +  +D+   PLE +   +     T+G                  L++ L+ KD R  LK  L +KL   +YR           L  + +   + F   ++L+ L+R+ +RLFP+ D         +A+   M   + AL+  N+R   +A+LE+KIR++Y+DRID  T VEG ++ +YA +P L+D++FLI+HA  LFP  AR++ G  +   + ALQ+++   R+A I  L A + ALY +  P +V  L   VAA F      N KEL   R LTAD   +FP +        + AVF
Sbjct:   84 QVLDVNSTAIHALPYEYGRLQYVKVLDIGSTPLEKRWIKKNHLTATSGNDDDEPNDLITTATRCQELMTQLRRKDERAQLKHALFEKLHDEVYRMECADTASATALRRMLQRVLKHFPLADELRSLIRNAERLFPSPDFMRGITVLENADPVEMRRTYEALRDTNDRNKRAADLEIKIRSLYFDRIDP-TTVEGMVKSIYAHIPDLQDIKFLIKHAAALFPKHAREVDGQEIQRKLVALQQEIAHERSAAIDKLLAVVKALYNDTEPDQVLNLVIKVAALFK-----NTKEL---RSLTADVPVVFPVEFLNANPLKIRAVF 396          
BLAST of mRNA_P-wetherbeei_contig6493.1.3 vs. uniprot
Match: T0SH23_SAPDV (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=T0SH23_SAPDV)

HSP 1 Score: 129 bits (325), Expect = 4.400e-31
Identity = 95/248 (38.31%), Postives = 141/248 (56.85%), Query Frame = 1
Query:  121 EANTAGLLSYLQYKDRRRALKTELQQKLRLSLYREVAGTPLGHEVLPPLAKAACRRFRGVNDLKQLVRHCDRLFPADLAACGGGNGSAEADRMHARFVALQRQNERKMLSAELELKIRAIYYDRIDDLTAVEGYIRDVYAAVPLLEDVQFLIQHAPKLFPAEARDISGPAVAAAMAALQRQLTAARAACIAALGAALAALYGERGP-RVEALADGVAAHFAHGRFANEKELECLRKLTADAAGIFPAD 861
            +A  A +L YL  KD RR  K  L +KL+   YRE A T  G E +  L K A + F   +D++ L+R+ +RLFP +L      + SA A  M A FV L++ N++K L+AELELKIR IY+DRID + AVE  +  +Y  +  L+D++FLI++A  LFP  A ++ G  +   +AALQ ++   R   I  +  A+  +Y +  P ++ AL D V   F        K ++ L+ L ADAA  FP++
Sbjct:  137 QAVCASVLRYLHRKDVRRQQKQILFEKLKDGPYRESADTNDGMERIHRLMKRAIKEFPTEDDVQSLIRNLERLFPPNLITASD-HPSATATAMRAHFVQLKQDNQKKKLAAELELKIRNIYFDRIDPV-AVEPMVLSIYTEIKSLKDIKFLIRYATSLFPPTAAEVDGAELRDRLAALQDEMARERQNAIDKVFVAVTGIYSDVEPDKIRALIDQVVPLF--------KNVKDLKTLAADAALHFPSE 374          
BLAST of mRNA_P-wetherbeei_contig6493.1.3 vs. uniprot
Match: A0A485LD80_9STRA (Aste57867_19096 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LD80_9STRA)

HSP 1 Score: 127 bits (318), Expect = 3.700e-30
Identity = 87/241 (36.10%), Postives = 134/241 (55.60%), Query Frame = 1
Query:  142 LSYLQYKDRRRALKTELQQKLRLSLYREVAGTPLGHEVLPPLAKAACRRFRGVNDLKQLVRHCDRLFPADLAACGGGNGSAEADRMHARFVALQRQNERKMLSAELELKIRAIYYDRIDDLTAVEGYIRDVYAAVPLLEDVQFLIQHAPKLFPAEARDISGPAVAAAMAALQRQLTAARAACIAALGAALAALYGERGP-RVEALADGVAAHFAHGRFANEKELECLRKLTADAAGIFPAD 861
            ++YL  KD RR LK EL  KL+   Y E A +  G E++  + K   + F+   D++ L+R+ +RLFPA+L     G+ +A    + A F+ L+R NE+K L+AELELKIR IY+DRID  + VE  +  +Y  +  L D++FLI+HA  LFP  A  ++G  +   + ALQ ++   R A I  +  A+  +Y +  P +++ L   V   F        K ++ L+ L ADA   FP +
Sbjct:  137 IAYLHRKDIRRQLKQELYDKLKDGPYLESADSNQGQEMIQHVMKRVLKEFQSEEDVRSLIRNVERLFPANLVQAQHGSTAAS---VRAHFLELKRDNEKKKLAAELELKIRNIYFDRIDP-SIVESMVMSIYTEIKALADIKFLIRHATALFPPTAAQVNGADLREKLVALQDEMARERMAAIDKVLQAVMTIYSDVEPDKIKTLVSQVTPLF--------KNVKDLKTLAADATLHFPGE 365          
BLAST of mRNA_P-wetherbeei_contig6493.1.3 vs. uniprot
Match: A0A1V9Z845_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z845_9STRA)

HSP 1 Score: 126 bits (316), Expect = 8.340e-30
Identity = 95/255 (37.25%), Postives = 146/255 (57.25%), Query Frame = 1
Query:  103 TKMQGFEANTAGLLSYLQYKDRRRALKTELQQKLRLSLYREVAGTPLGHEVLPPLAKAACRRFRGVNDLKQLVRHCDRLFPADLAACGGGNG-SAEADRMHARFVALQRQNERKMLSAELELKIRAIYYDRIDDLTAVEGYIRDVYAAVPLLEDVQFLIQHAPKLFPAEARDISGPAVAAAMAALQRQLTAARAACIAALGAALAALYGERGP-RVEALADGVAAHFAHGRFANEKELECLRKLTADAAGIFPAD 861
            TK Q  +A    +L YL  KD RR  K  L +KL+   YRE A +  G   +  L K A + F   +D++ L+R+ +RLFP +L A     G +A A R H  FV L+++N++K L+AELELKIR IY+DRID +T VE  ++ +YA +  L+D++FLI+++  LFP  A +++G  +   + ALQ ++   R   I  +  A+ A+Y +  P ++  L D V   F        K ++ L+ L ADAA  FP++
Sbjct:  133 TKKQA-QAVCVSVLKYLHRKDVRRQQKQILLEKLKDGPYRESADSNDGINRIERLMKRALKEFPTEDDVQSLIRNLERLFPPNLVAASNDTGVTAVAMRTH--FVQLKQENQKKKLAAELELKIRNIYFDRIDPVT-VEPMVQSIYAEIKSLKDIKFLIRYSTSLFPPTAAEVNGADLRDRLVALQDEMAQERQNAIDKVIVAVTAIYSDVEPDKIRVLIDQVVPLF--------KNVKDLKTLAADAALHFPSE 375          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6493.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FIB5_ECTSI1.270e-6147.89Hypothetical leucine rich repeat protein n=2 Tax=E... [more]
A0A7S2RGP1_9STRA5.000e-5344.33Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2UUH4_9STRA9.680e-5247.51Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2BKK2_9STRA1.220e-4940.14Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A8J2SN79_9STRA3.080e-3639.69Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A6G0XC80_9STRA6.380e-3436.36Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
K3X410_GLOUD4.030e-3233.23Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
T0SH23_SAPDV4.400e-3138.31Uncharacterized protein n=3 Tax=Saprolegnia TaxID=... [more]
A0A485LD80_9STRA3.700e-3036.10Aste57867_19096 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9Z845_9STRA8.340e-3037.25Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6493contigP-wetherbeei_contig6493:172..1794 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FIB5
Preferred nameLRCH1
PFAMsCH,LRR_8
Model size900
Max annot lvl2759|Eukaryota
KEGG koko:K09506,ko:K10641
Hectar predicted targeting categoryother localisation
GOsGO:0002682,GO:0002683,GO:0002685,GO:0002686,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005886,GO:0007154,GO:0007165,GO:0008150,GO:0009987,GO:0010033,GO:0016020,GO:0023052,GO:0030334,GO:0030336,GO:0032879,GO:0034097,GO:0034260,GO:0040012,GO:0040013,GO:0042221,GO:0043086,GO:0043087,GO:0044092,GO:0044424,GO:0044464,GO:0048519,GO:0048523,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051270,GO:0051271,GO:0051336,GO:0051346,GO:0051716,GO:0065007,GO:0065009,GO:0070887,GO:0071310,GO:0071345,GO:0071944,GO:1990868,GO:1990869,GO:2000145,GO:2000146,GO:2000401,GO:2000402,GO:2000404,GO:2000405
Exons4
Evalue2.08e-62
EggNOG OGsCOG4886@1|root,KOG0619@2759|Eukaryota
EC2.3.2.27
Descriptionregulation of response to stimulus
Cds size900
COG categoryU
BRITEko00000,ko01000,ko03009,ko03110,ko04121,ko04131
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186917.529047-CDS-P-wetherbeei_contig6493:171..2871683186917.529047-CDS-P-wetherbeei_contig6493:171..287Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6493 172..287 +
1683186917.5417721-CDS-P-wetherbeei_contig6493:812..10551683186917.5417721-CDS-P-wetherbeei_contig6493:812..1055Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6493 813..1055 +
1683186917.5517728-CDS-P-wetherbeei_contig6493:1151..11731683186917.5517728-CDS-P-wetherbeei_contig6493:1151..1173Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6493 1152..1173 +
1683186917.5620089-CDS-P-wetherbeei_contig6493:1275..17941683186917.5620089-CDS-P-wetherbeei_contig6493:1275..1794Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6493 1276..1794 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6493.1.3prot_P-wetherbeei_contig6493.1.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6493 172..1794 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6493.1.3

>prot_P-wetherbeei_contig6493.1.3 ID=prot_P-wetherbeei_contig6493.1.3|Name=mRNA_P-wetherbeei_contig6493.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=300bp
KVLDVRDTLLRTLPREISRLPMLFTVDVRGAPLETKMQGFEANTAGLLSY
LQYKDRRRALKTELQQKLRLSLYREVAGTPLGHEVLPPLAKAACRRFRGV
NDLKQLVRHCDRLFPADLAACGGGNGSAEADRMHARFVALQRQNERKMLS
AELELKIRAIYYDRIDDLTAVEGYIRDVYAAVPLLEDVQFLIQHAPKLFP
AEARDISGPAVAAAMAALQRQLTAARAACIAALGAALAALYGERGPRVEA
LADGVAAHFAHGRFANEKELECLRKLTADAAGIFPADLAGIDPAAVAAVF
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mRNA from alignment at P-wetherbeei_contig6493:172..1794+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6493.1.3 ID=mRNA_P-wetherbeei_contig6493.1.3|Name=mRNA_P-wetherbeei_contig6493.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1623bp|location=Sequence derived from alignment at P-wetherbeei_contig6493:172..1794+ (Phaeothamnion wetherbeei SAG_119_79)
AAGGTTCTTGATGTTCGAGACACGCTGTTGCGGACGCTGCCGCGGGAGAT ATCGCGGCTGCCGATGCTCTTCACGGTCGACGTTCGGGGCGCGCCGCTCG AGACAAAGATGCAGGGGTGAGTGGAATAAAGAAGGAAGCTGGCCTCGACC TGAACTACATTCAAAACGCACCACCAGCGGCTCAAAAGGAAATGACGAGA AGGAGGGGCCTTTTTTGAACTAAAGGTTTGCAAGCCGTATCTCGCCAAGT TTTTCCCTCCAGAATTCGTCCTTTACGAAAAGGATGATTCATAGGACGAT CGGCCAATAGTAGACGAACTGTGGTTGACTTCTTTTCTGATCCTGCGCAC TGATATCTCGCGCGTTTATGTGGCGGCGTACTTGCCCGTTTGATTCCCGC CCAATTGGTGATGAGATGCCAACATCAGCCATGAAGTGGGGTCTCTTTCT CCTCCCCCCTTCCCCCACCCCTCCCTCCCTCCCGCCTCCCATGTGCCCCG TTGACGGCCGCGCCTGCTGTATGCCGCTTGCTACTCCCCGCTTGCTTCGA TTGCCATTTGTTCCACGTGCGGCTTATTGCATGGCTGCCCTCTTGCCACA TGCTCGTGTCACAACTCTCGCATGTCGTACCTTCAAAACAGCTTCGAGGC GAACACGGCGGGACTCCTGTCATACTTGCAATACAAGGATCGCCGGCGCG CCCTTAAAACCGAGCTCCAACAGAAGCTACGGTTGTCGCTCTACCGCGAA GTCGCCGGCACACCGCTGGGCCACGAGGTGTTGCCGCCGCTCGCCAAGGC GGCTTGCCGCCGCTTTCGCGGCGTAAACGACCTGAAGCAGCTCGTGCGCC ACTGCGATCGCCTGTTTCCTGCGGACCTAGCGGCGTTTGCGGCTTCAGCG GCGGCGGCGATGGCAGCAGGGCAAGACGAGGGGGGAGAGATGGCGGCGAC TTTAGGAACGGTTCACAGTGGGGTTCGCAGTTGTGGTGGAGGTAACGGCA GCGTCAGTGGCCGCACGGCGGCGACAGCAGCGGGAAATGCCCCAACAACA GTGGCGGCGACAACGACGGCGGCGGCAGCGGCAGCGTTAGAGGCAACAGC GGAGGCTGAGGCGGACCGAATGCACGCCCGCTTCGTCGCGCTGCAGCGGC AGAACGAGCGCAAGATGCTGAGCGCGGAACTGGAGCTGAAAATTCGCGCT ATTTACTATGACCGGATTGATGACCTCACAGCGGTCGAAGGTTACATCCG GGACGTGTATGCAGCGGTCCCGCTGCTGGAAGACGTTCAGTTCCTGATCC AGCACGCGCCCAAACTGTTTCCGGCGGAGGCCCGGGATATCTCCGGCCCG GCGGTGGCGGCAGCCATGGCGGCACTGCAGCGGCAGCTGACAGCGGCACG CGCTGCCTGCATCGCCGCGCTCGGCGCGGCGCTGGCGGCGCTGTACGGCG AGCGCGGGCCACGCGTCGAGGCGCTGGCGGACGGCGTGGCGGCGCACTTT GCACATGGCCGCTTTGCCAACGAGAAAGAGCTGGAGTGCCTCCGGAAGCT GACGGCGGACGCCGCTGGAATCTTCCCCGCGGACCTCGCCGGGATCGATC CGGCGGCAGTCGCCGCGGTGTTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6493:172..1794+

>mRNA_P-wetherbeei_contig6493.1.3 ID=mRNA_P-wetherbeei_contig6493.1.3|Name=mRNA_P-wetherbeei_contig6493.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=900bp|location=Sequence derived from alignment at P-wetherbeei_contig6493:172..1794+ (Phaeothamnion wetherbeei SAG_119_79)
AAGGTTCTTGATGTTCGAGACACGCTGTTGCGGACGCTGCCGCGGGAGAT
ATCGCGGCTGCCGATGCTCTTCACGGTCGACGTTCGGGGCGCGCCGCTCG
AGACAAAGATGCAGGGCTTCGAGGCGAACACGGCGGGACTCCTGTCATAC
TTGCAATACAAGGATCGCCGGCGCGCCCTTAAAACCGAGCTCCAACAGAA
GCTACGGTTGTCGCTCTACCGCGAAGTCGCCGGCACACCGCTGGGCCACG
AGGTGTTGCCGCCGCTCGCCAAGGCGGCTTGCCGCCGCTTTCGCGGCGTA
AACGACCTGAAGCAGCTCGTGCGCCACTGCGATCGCCTGTTTCCTGCGGA
CCTAGCGGCTTGTGGTGGAGGTAACGGCAGCGCTGAGGCGGACCGAATGC
ACGCCCGCTTCGTCGCGCTGCAGCGGCAGAACGAGCGCAAGATGCTGAGC
GCGGAACTGGAGCTGAAAATTCGCGCTATTTACTATGACCGGATTGATGA
CCTCACAGCGGTCGAAGGTTACATCCGGGACGTGTATGCAGCGGTCCCGC
TGCTGGAAGACGTTCAGTTCCTGATCCAGCACGCGCCCAAACTGTTTCCG
GCGGAGGCCCGGGATATCTCCGGCCCGGCGGTGGCGGCAGCCATGGCGGC
ACTGCAGCGGCAGCTGACAGCGGCACGCGCTGCCTGCATCGCCGCGCTCG
GCGCGGCGCTGGCGGCGCTGTACGGCGAGCGCGGGCCACGCGTCGAGGCG
CTGGCGGACGGCGTGGCGGCGCACTTTGCACATGGCCGCTTTGCCAACGA
GAAAGAGCTGGAGTGCCTCCGGAAGCTGACGGCGGACGCCGCTGGAATCT
TCCCCGCGGACCTCGCCGGGATCGATCCGGCGGCAGTCGCCGCGGTGTTT
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