prot_P-wetherbeei_contig6490.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6490.1.1
Unique Nameprot_P-wetherbeei_contig6490.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length83
Homology
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BLAST of mRNA_P-wetherbeei_contig6490.1.1 vs. uniprot
Match: UPI0014038110 (neuroblastoma-amplified sequence isoform X1 n=2 Tax=Petromyzon marinus TaxID=7757 RepID=UPI0014038110)

HSP 1 Score: 49.3 bits (116), Expect = 7.670e-5
Identity = 29/77 (37.66%), Postives = 48/77 (62.34%), Query Frame = 0 
Query:    4 PARQLARDMAEDVVLGVAREHFNAAASLRGPELEAARRCLAVLPWCSDAVAAERRLLDAAALVVDVGADMVPLQLRL 80
            P+++LA   + ++VLG ARE+FNA+ SL    ++ AR CL ++      V  E  L+ A AL+ +   +M+PL++RL
Sbjct: 1176 PSQRLAYARSLELVLGAAREYFNASKSLADDSMDIARECLKLITDAPPRVQEELDLMSALALLEEFKLEMLPLEVRL 1252
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6490.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI00140381107.670e-537.66neuroblastoma-amplified sequence isoform X1 n=2 Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR15922NEUROBLASTOMA-AMPLIFIED SEQUENCEcoord: 7..80

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6490contigP-wetherbeei_contig6490:452..700 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6490.1.1mRNA_P-wetherbeei_contig6490.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6490 452..700 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6490.1.1 ID=prot_P-wetherbeei_contig6490.1.1|Name=mRNA_P-wetherbeei_contig6490.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=83bp
LPGPARQLARDMAEDVVLGVAREHFNAAASLRGPELEAARRCLAVLPWCS
DAVAAERRLLDAAALVVDVGADMVPLQLRLKVE
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