mRNA_P-wetherbeei_contig6484.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6484.2.1
Unique NamemRNA_P-wetherbeei_contig6484.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6484.2.1 vs. uniprot
Match: A0A835YI21_9STRA (Lactonase, 7-bladed beta-propeller-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YI21_9STRA)

HSP 1 Score: 206 bits (523), Expect = 1.440e-62
Identity = 95/134 (70.90%), Postives = 112/134 (83.58%), Query Frame = 1
Query:    1 LKLVQTIDTIPSAFPGHLNTCGRICVDPTGRFVLVSNRGHDSIAVFRIDDDASSCGEGGKLSIVSYCHTRGRTPRHFQFDGSGDFLLAANQDTDTVTIFRMCRETGNLMYTGNVYDVPSPNFVCVQKPHPNNRR 402
            L+LVQ+I TIPSAFPG LNTCGRIC+DP+GR+VLVSNRGHDSIAVF I+ D  +CGEGGKLS+VS+ HTRGRTPRHFQFD +G  LLAANQDTDT+T+F     TG L ++G+VYD PSPNFVCV + H + RR
Sbjct:  276 LRLVQSISTIPSAFPGTLNTCGRICIDPSGRYVLVSNRGHDSIAVFAINSDTDACGEGGKLSVVSFTHTRGRTPRHFQFDPTGTTLLAANQDTDTITLFSFDAATGVLGFSGHVYDCPSPNFVCVAESHVDIRR 409          
BLAST of mRNA_P-wetherbeei_contig6484.2.1 vs. uniprot
Match: A0A835YJT4_9STRA (Lactonase, 7-bladed beta-propeller-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJT4_9STRA)

HSP 1 Score: 208 bits (530), Expect = 9.620e-62
Identity = 94/134 (70.15%), Postives = 111/134 (82.84%), Query Frame = 1
Query:    1 LKLVQTIDTIPSAFPGHLNTCGRICVDPTGRFVLVSNRGHDSIAVFRIDDDASSCGEGGKLSIVSYCHTRGRTPRHFQFDGSGDFLLAANQDTDTVTIFRMCRETGNLMYTGNVYDVPSPNFVCVQKPHPNNRR 402
            L+LVQ I TIPSAFP  LNTCGRIC+DP+GR VLVSNRGHDSIAVF I  D  +CGEGGKLS+VSY HTRG+TPRHFQFD SG +LL+ANQDTD++T+F    +TG L +TG+VYD PSPNFVC+++PH   RR
Sbjct:  477 LRLVQNISTIPSAFPRKLNTCGRICIDPSGRHVLVSNRGHDSIAVFAIHSDTDACGEGGKLSVVSYTHTRGKTPRHFQFDPSGRYLLSANQDTDSITLFNFDPDTGALGFTGDVYDCPSPNFVCIREPHTTGRR 610          
BLAST of mRNA_P-wetherbeei_contig6484.2.1 vs. uniprot
Match: A0A0G4I6E3_9ALVE (Uncharacterized protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4I6E3_9ALVE)

HSP 1 Score: 196 bits (498), Expect = 1.180e-57
Identity = 88/126 (69.84%), Postives = 105/126 (83.33%), Query Frame = 1
Query:    1 LKLVQTIDTIPSAFPGHLNTCGRICVDPTGRFVLVSNRGHDSIAVFRIDDDASSCGEGGKLSIVSYCHTRGRTPRHFQFDGSGDFLLAANQDTDTVTIFRMCRETGNLMYTGNVYDVPSPNFVCVQ 378
            L+ +Q I TIP+A+P   NTCGRI VDP G  V VSNRGHDSIAVFRIDDD+SSCGEGGKLSIVSYCHTRGRTPRHFQFD  G+F+L ANQDT+++T+F+  +E+  L +TG  Y+VPSPNFVCV+
Sbjct:  276 LRFIQNISTIPTAYPRKSNTCGRIAVDPKGLHVFVSNRGHDSIAVFRIDDDSSSCGEGGKLSIVSYCHTRGRTPRHFQFDPLGEFVLCANQDTNSITLFKFDQESSELSFTGESYNVPSPNFVCVE 401          
BLAST of mRNA_P-wetherbeei_contig6484.2.1 vs. uniprot
Match: F2U7G7_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U7G7_SALR5)

HSP 1 Score: 168 bits (425), Expect = 4.000e-48
Identity = 79/129 (61.24%), Postives = 96/129 (74.42%), Query Frame = 1
Query:    1 LKLVQTIDTIPSAFPGHLNTCGRICVDPTGRFVLVSNRGHDSIAVFRIDDDASSCGEGGKLSIVSYCHTRGRTPRHFQFDGSGDFLLAANQDTDTVTIFRMCRETGNLMYTGNVYDVPSPNFVCVQKPH 387
            L L+QTI TIPSAFP HLNTCGRI V   G FV+VSNRGH+SI+ +R++DD       G L    Y HTRGRTPRHFQFD +G++LL ANQDTD+V++F   R+ G L + G+ YDVPSPNFVCVQ P+
Sbjct:  270 LTLLQTISTIPSAFPRHLNTCGRITVTNAGTFVVVSNRGHNSISTYRVNDD-------GTLCSADYFHTRGRTPRHFQFDSTGNWLLVANQDTDSVSVFSFDRKHGTLNFAGHTYDVPSPNFVCVQMPY 391          
BLAST of mRNA_P-wetherbeei_contig6484.2.1 vs. uniprot
Match: A0A7S2FT19_9DINO (Hypothetical protein (Fragment) n=1 Tax=Alexandrium andersonii TaxID=327968 RepID=A0A7S2FT19_9DINO)

HSP 1 Score: 159 bits (401), Expect = 1.070e-47
Identity = 76/124 (61.29%), Postives = 90/124 (72.58%), Query Frame = 1
Query:    1 LKLVQTIDTIPSAFPGHLNTCGRICVDPTGRFVLVSNRGHDSIAVFRIDDDASSCGEGGKLSIVSYCHTRGRTPRHFQFDGSGDFLLAANQDTDTVTIFRMCRETGNLMYTGNVYDVPSPNFVC 372
            L+LVQT+ TIP AFPG LNTCGRI V   G FVLVSNRGH+SIAVFR+  + +     G LS+    HTRG TPRHFQFDGSG +L+ ANQD+D + +FR    TG L +TG+ Y VPSPNFVC
Sbjct:    8 LRLVQTVRTIPDAFPGTLNTCGRIAVHSAGNFVLVSNRGHNSIAVFRVHQEPA-----GLLSVAHLQHTRGATPRHFQFDGSGQWLITANQDSDNIGVFRFNLATGKLEWTGHEYSVPSPNFVC 126          
BLAST of mRNA_P-wetherbeei_contig6484.2.1 vs. uniprot
Match: A0A7S3HFB8_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HFB8_9STRA)

HSP 1 Score: 159 bits (402), Expect = 2.630e-47
Identity = 78/124 (62.90%), Postives = 91/124 (73.39%), Query Frame = 1
Query:    1 LKLVQTIDTIPSAFPGHLNTCGRICVDPTGRFVLVSNRGHDSIAVFRIDDDASSCGEGGKLSIVSYCHTRGRTPRHFQFDGSGDFLLAANQDTDTVTIFRMCRETGNLMYTGNVYDVPSPNFVC 372
            L+L QTI TIP AFPG LNTCGRI V   G FVLVSNRGHDSI VFR++    S  + G+LSIV   HTRG TPRHFQFD SG +L++ANQD+D + +FR    TG L +TG+ Y VPSPNFVC
Sbjct:   13 LRLRQTIRTIPDAFPGDLNTCGRITVHTAGNFVLVSNRGHDSITVFRVNQ---SLLKAGQLSIVGSFHTRGATPRHFQFDASGQWLISANQDSDRIAVFRFNLATGRLEWTGHEYSVPSPNFVC 133          
BLAST of mRNA_P-wetherbeei_contig6484.2.1 vs. uniprot
Match: A0A1Z5JVP1_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JVP1_FISSO)

HSP 1 Score: 168 bits (426), Expect = 2.960e-47
Identity = 78/124 (62.90%), Postives = 94/124 (75.81%), Query Frame = 1
Query:    1 LKLVQTIDTIPSAFPGHLNTCGRICVDPTGRFVLVSNRGHDSIAVFRIDDDASSCGEGGKLSIVSYCHTRGRTPRHFQFDGSGDFLLAANQDTDTVTIFRMCRETGNLMYTGNVYDVPSPNFVC 372
            L+L+Q+I T+PSAFP  +NTCGRICV  +GRFV+VSNRGH SIA+FR+   A + GE   LS V Y HTRG TPRHFQFD SG +LL ANQDTD++T+F     +G + YTGN Y VPSPNFVC
Sbjct:  313 LRLIQSIKTLPSAFPTDMNTCGRICVHKSGRFVVVSNRGHQSIAIFRVKTKAPNTGE---LSTVGYFHTRGETPRHFQFDASGQYLLVANQDTDSLTVFHFNLSSGEIRYTGNEYRVPSPNFVC 433          
BLAST of mRNA_P-wetherbeei_contig6484.2.1 vs. uniprot
Match: A0A7S0UJ26_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia delicatissima TaxID=44447 RepID=A0A7S0UJ26_9STRA)

HSP 1 Score: 161 bits (407), Expect = 5.490e-47
Identity = 77/129 (59.69%), Postives = 91/129 (70.54%), Query Frame = 1
Query:    1 LKLVQTIDTIPSAFPGHLNTCGRICVDPTGRFVLVSNRGHDSIAVFRIDDDASSCGEGGKLSIVSYCHTRGRTPRHFQFDGSGDFLLAANQDTDTVTIFRMCRETGNLMYTGNVYDVPSPNFVCVQKPH 387
            L+LVQ+I TIP+AFP  +NTCGR+CV  +GRFV+VSNRGH SIAVFR+    S  GE  K+  +   HTRG TPRHFQFD SG +LL ANQDTD++ IF      G L Y+GN Y VPSPNFVC    H
Sbjct:   60 LRLVQSISTIPNAFPTTMNTCGRMCVHKSGRFVIVSNRGHQSIAVFRVKTKGSKRGELRKIGCI---HTRGETPRHFQFDNSGQYLLVANQDTDSIAIFNFNLSNGELKYSGNEYRVPSPNFVCCCPTH 185          
BLAST of mRNA_P-wetherbeei_contig6484.2.1 vs. uniprot
Match: A0A813KU63_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813KU63_POLGL)

HSP 1 Score: 159 bits (401), Expect = 1.530e-46
Identity = 76/133 (57.14%), Postives = 92/133 (69.17%), Query Frame = 1
Query:    1 LKLVQTIDTIPSAFPGHLNTCGRICVDPTGRFVLVSNRGHDSIAVFRIDDDASSCGEGGKLSIVSYCHTRGRTPRHFQFDGSGDFLLAANQDTDTVTIFRMCRETGNLMYTGNVYDVPSPNFVCVQKPHPNNR 399
            L+L+QT+ TIP AFPG +NTCGRI V   G FVLVSNRGHDSI VFRI  + +     G LS+    HTRG TPRHFQ D SG +L+ ANQD++ + +FR    TG+L +TGN Y+VPSPNFVC   P P  R
Sbjct:   62 LRLMQTVRTIPDAFPGDMNTCGRISVHSAGNFVLVSNRGHDSITVFRIHHELA---HAGMLSLAHLQHTRGATPRHFQMDASGQWLITANQDSNNIGVFRFNLATGSLDWTGNEYNVPSPNFVCSVTPRPETR 191          
BLAST of mRNA_P-wetherbeei_contig6484.2.1 vs. uniprot
Match: B8CEY4_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CEY4_THAPS)

HSP 1 Score: 165 bits (418), Expect = 6.220e-46
Identity = 75/126 (59.52%), Postives = 93/126 (73.81%), Query Frame = 1
Query:    1 LKLVQTIDTIPSAFPGHLNTCGRICVDPTGRFVLVSNRGHDSIAVFRIDDDASSCGEG--GKLSIVSYCHTRGRTPRHFQFDGSGDFLLAANQDTDTVTIFRMCRETGNLMYTGNVYDVPSPNFVC 372
            LKL+Q+I T+PSAFP  +NTCGRICV  +GRFV+VSNRGH+SI +FR+     S G+   G L+ V + HTRG TPRHFQFD SG FL+ ANQD+DT+ +F     +G + YTGN Y VPSPNFVC
Sbjct:  338 LKLIQSIKTVPSAFPTQMNTCGRICVHQSGRFVIVSNRGHESITIFRVKQSNGSSGKAMKGSLAQVGFFHTRGETPRHFQFDHSGQFLIVANQDSDTIAVFSFNLTSGEIKYTGNEYRVPSPNFVC 463          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6484.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YI21_9STRA1.440e-6270.90Lactonase, 7-bladed beta-propeller-domain-containi... [more]
A0A835YJT4_9STRA9.620e-6270.15Lactonase, 7-bladed beta-propeller-domain-containi... [more]
A0A0G4I6E3_9ALVE1.180e-5769.84Uncharacterized protein n=1 Tax=Chromera velia CCM... [more]
F2U7G7_SALR54.000e-4861.24Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
A0A7S2FT19_9DINO1.070e-4761.29Hypothetical protein (Fragment) n=1 Tax=Alexandriu... [more]
A0A7S3HFB8_9STRA2.630e-4762.90Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
A0A1Z5JVP1_FISSO2.960e-4762.90Uncharacterized protein n=2 Tax=Fistulifera solari... [more]
A0A7S0UJ26_9STRA5.490e-4759.69Hypothetical protein n=1 Tax=Pseudo-nitzschia deli... [more]
A0A813KU63_POLGL1.530e-4657.14Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
B8CEY4_THAPS6.220e-4659.52Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6484contigP-wetherbeei_contig6484:3010..3423 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog946362.XP_004994888.1
PFAMsLactonase
Model size414
Max annot lvl33154|Opisthokonta
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.56e-49
EggNOG OGs29K1N@1|root,2RTAI@2759|Eukaryota,3A8RG@33154|Opisthokonta
Ec32 ortholog descriptionLactonase, 6-Phosphogluconolactonase
Ec32 orthologEc-13_002400.1
DescriptionLactonase, 7-bladed beta-propeller
Cds size414
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186916.8509314-CDS-P-wetherbeei_contig6484:3009..34231683186916.8509314-CDS-P-wetherbeei_contig6484:3009..3423Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6484 3010..3423 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6484.2.1prot_P-wetherbeei_contig6484.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6484 3010..3423 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6484.2.1

>prot_P-wetherbeei_contig6484.2.1 ID=prot_P-wetherbeei_contig6484.2.1|Name=mRNA_P-wetherbeei_contig6484.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=138bp
LKLVQTIDTIPSAFPGHLNTCGRICVDPTGRFVLVSNRGHDSIAVFRIDD
DASSCGEGGKLSIVSYCHTRGRTPRHFQFDGSGDFLLAANQDTDTVTIFR
MCRETGNLMYTGNVYDVPSPNFVCVQKPHPNNRRVRV*
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mRNA from alignment at P-wetherbeei_contig6484:3010..3423-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6484.2.1 ID=mRNA_P-wetherbeei_contig6484.2.1|Name=mRNA_P-wetherbeei_contig6484.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=414bp|location=Sequence derived from alignment at P-wetherbeei_contig6484:3010..3423- (Phaeothamnion wetherbeei SAG_119_79)
CTCAAGCTTGTGCAGACGATCGACACCATCCCGTCGGCCTTCCCAGGCCA CCTCAATACGTGCGGCCGCATCTGCGTGGACCCGACGGGCCGCTTCGTGC TGGTGAGCAACCGCGGCCACGACTCGATTGCTGTCTTCCGCATCGACGAC GATGCGTCGTCGTGCGGCGAGGGCGGCAAGCTCTCCATCGTGTCGTATTG CCACACTCGCGGCCGCACCCCGCGCCACTTCCAGTTCGACGGCAGCGGCG ACTTCCTGCTGGCGGCCAACCAGGACACGGACACGGTCACCATTTTCCGC ATGTGCCGCGAGACGGGCAACCTCATGTACACGGGCAACGTCTACGACGT GCCATCCCCCAACTTCGTCTGCGTGCAGAAGCCGCATCCCAACAACCGGC GCGTTCGCGTTTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6484:3010..3423-

>mRNA_P-wetherbeei_contig6484.2.1 ID=mRNA_P-wetherbeei_contig6484.2.1|Name=mRNA_P-wetherbeei_contig6484.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=414bp|location=Sequence derived from alignment at P-wetherbeei_contig6484:3010..3423- (Phaeothamnion wetherbeei SAG_119_79)
CTCAAGCTTGTGCAGACGATCGACACCATCCCGTCGGCCTTCCCAGGCCA
CCTCAATACGTGCGGCCGCATCTGCGTGGACCCGACGGGCCGCTTCGTGC
TGGTGAGCAACCGCGGCCACGACTCGATTGCTGTCTTCCGCATCGACGAC
GATGCGTCGTCGTGCGGCGAGGGCGGCAAGCTCTCCATCGTGTCGTATTG
CCACACTCGCGGCCGCACCCCGCGCCACTTCCAGTTCGACGGCAGCGGCG
ACTTCCTGCTGGCGGCCAACCAGGACACGGACACGGTCACCATTTTCCGC
ATGTGCCGCGAGACGGGCAACCTCATGTACACGGGCAACGTCTACGACGT
GCCATCCCCCAACTTCGTCTGCGTGCAGAAGCCGCATCCCAACAACCGGC
GCGTTCGCGTTTGA
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