mRNA_P-wetherbeei_contig6481.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6481.1.1 vs. uniprot
Match: A0A497XF78_9PROT (Outer membrane lipoprotein-sorting protein n=1 Tax=Sulfurisoma sediminicola TaxID=1381557 RepID=A0A497XF78_9PROT) HSP 1 Score: 267 bits (683), Expect = 8.240e-87 Identity = 141/235 (60.00%), Postives = 173/235 (73.62%), Query Frame = 1
Query: 1 VRMASLAVLACLCVSAQAQTGRELVEESLRRQAPPPSVYEERVLLLIDSLGQHTVRTARYYSRLDSAGLRRLMVIDTPRELRGIRLYVSRDAGGGARNGPAASSPVFGSDYTVADFEGEQPQDFNYEREDNQELDRVTHLVVRATPRDEAVARATGYGVRRIYLRKDNLFVSRIDCLDRQGRIAKRLTFKDPRPDDTGAWRPGMTLTEDLREDRRTLLKVERRVHSADYVPAGVF 705
V A L LACL A+AQ GR L+EESLRR APPP VYEE+ L+L D GQ VRT RYY+R D+AG + L VI+TP E +G +YV RDA G R G A S+PVFGS+++VAD E EQ QDF+Y+RE + +LDRV H +RA P EAVA AT Y RR+YLRKDNL+++RI+ DRQGR+A+R TF+DPRP+++GAWR M L EDL + RR+LLK ERR HS DYVPA VF
Sbjct: 32 VSAALLLPLACLVGGARAQDGRALMEESLRRHAPPPYVYEEQALVLSDRQGQLGVRTMRYYARRDAAGSQSLRVIETPAESKGNAIYVGRDAADGKRRGAAPSAPVFGSNFSVADLEEEQVQDFHYKREADHDLDRVPHHALRAVPASEAVASATNYRERRLYLRKDNLYITRIEYRDRQGRLARRQTFRDPRPEESGAWRANMILMEDLVDGRRSLLKTERRAHSPDYVPADVF 266
BLAST of mRNA_P-wetherbeei_contig6481.1.1 vs. uniprot
Match: A0A661BLR0_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661BLR0_9GAMM) HSP 1 Score: 161 bits (407), Expect = 9.840e-45 Identity = 103/255 (40.39%), Postives = 140/255 (54.90%), Query Frame = 1
Query: 10 ASLAVLACLCVSAQAQ------TGRELVEESLRRQAPPPSVYEERVLLLIDSLGQHTVRTARYYSRLDSAG-LRRLMVIDTPRELRGIRLYVSRDAGGGARNG-------PAASSPV--------FGSDYTVADFEGEQPQDFNYEREDNQELDRVTHLVVRATPRDEAVARATGYGVRRIYLRKDNLFVSRIDCLDRQGRIAKRLTFKDPRPDDTGAWRPGMTLTEDLREDRRTLLKVERRVHSADYVPAGVFE 708
A L VL L V A+AQ TG E+++E RR P VYEE+ ++L+D VR R +R + G ++ L++ D P E+RG+ L RD G R+G P PV G+D+++ D E P DF Y R ++ LD V + VV A P+DEAV R T YG+RR ++KD L +++ D D + R KRLT D P +WR MT+ D RE RTLLK++RRV+S DYVPA FE
Sbjct: 18 ALLIVLMLLPVGARAQEAEGAWTGPEIMQEVFRRHEQFPYVYEEQTMVLMDEARNRDVRQCRRLTRAEPDGTVKFLLIFDAPAEIRGVALLAVRDPNGNTRSGVYLPAFGPEFKRPVGDGRRGHFLGTDFSIEDLTPELPNDFKYVRRLDRSLDGVEYFVVEARPKDEAVQRTTDYGLRRHLIQKDTLVITQTDFFDTRQRFVKRLTNYDLTPVRGESWRANMTVVYDEREKHRTLLKIDRRVYSRDYVPAEFFE 272
BLAST of mRNA_P-wetherbeei_contig6481.1.1 vs. uniprot
Match: A0A6N0HRJ5_9GAMM (Outer membrane lipoprotein-sorting protein n=2 Tax=Gammaproteobacteria incertae sedis TaxID=118884 RepID=A0A6N0HRJ5_9GAMM) HSP 1 Score: 152 bits (385), Expect = 1.450e-41 Identity = 89/233 (38.20%), Postives = 133/233 (57.08%), Query Frame = 1
Query: 58 TGRELVEESLRRQAPPPSVYEERVLLLIDSLGQHTVRTARYYSRLDSAG-LRRLMVIDTPRELRGIRLYVSRDAGGGARNG---PAASSPV------------FGSDYTVADFEGEQPQDFNYEREDNQELDRVTHLVVRATPRDEAVARATGYGVRRIYLRKDNLFVSRIDCLDRQGRIAKRLTFKDPRPDDTGAWRPGMTLTEDLREDRRTLLKVERRVHSADYVPAGVFE 708
+G E+++ + R P +E + ++L+D+ G VR R ++R++ G L L+V D PRE+ G+ L + R G N PA + + GSD+TV D E +D++Y RED+ +D + H VV ATP+ +A+A ATGYG+RR+++RK+NLF RID DR R+ KR T D R D WR M L E+ R+ R+L+K++ R+ S DYVP FE
Sbjct: 26 SGAEIMQGARERHDHFPYTFERQSMILVDANGSRNVRRMRRFTRIEDDGQLNHLLVFDYPREIAGVALRLRRFPDGKVENDLYLPAYGAQLKESAAHSRGATFLGSDFTVRDLTPEVIEDYHYRREDDLVIDDIEHFVVEATPKGQAIALATGYGMRRLFIRKENLFPIRIDYYDRHERLFKRETRHDIRQVDGKMWRSNMILMENFRKQHRSLIKIDHRIFSIDYVPETHFE 258
BLAST of mRNA_P-wetherbeei_contig6481.1.1 vs. uniprot
Match: A0A661RDN5_9DELT (Outer membrane lipoprotein-sorting protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661RDN5_9DELT) HSP 1 Score: 144 bits (362), Expect = 5.040e-38 Identity = 85/236 (36.02%), Postives = 130/236 (55.08%), Query Frame = 1
Query: 58 TGRELVEESLRRQAPPPSVYEERVLLLIDSLGQHTVRTARYYSRLDSAG-LRRLMVIDTPRELRGIRLYVSRDAGGGARNGPAAS---SPVFGSDYTVADFEGEQPQ----------------DFNYEREDNQELDRVTHLVVRATPRDEAVARATGYGVRRIYLRKDNLFVSRIDCLDRQGRIAKRLTFKDPRPDDTGAWRPGMTLTEDLREDRRTLLKVERRVHSADYVPAGVF 705
TGR +++E + P VYEE+ ++L DS G VR R +SR++ G ++ L+V D+P E+RG+ L V R NGP S P FG + +D + DF Y R +Q +++V + VV A P+DE + ++TGY +RR ++R+DN F+ R D DR+GR +KRLT D + + W M L E+ ++ +TL+K++RRV S DYVP +F
Sbjct: 44 TGRRIMDEVFKGHELFPYVYEEQTMILTDSAGNQDVRKVRRFSRVEKDGTIKYLLVFDSPAEVRGVALRVIRQY-----NGPVESWIYLPAFGKELISSDCKSRDSHFLGTDFAMEDLTEILSDFRYVRIPDQTIEKVAYFVVEAFPQDEKIEQSTGYSIRRHFIRQDNFFIVRTDYFDRRGRFSKRLTQHDLKNINGNIWTANMILMENRKQKHKTLIKIDRRVFSRDYVPPKMF 274
BLAST of mRNA_P-wetherbeei_contig6481.1.1 vs. uniprot
Match: A0A8J6NSE4_9DELT (Outer membrane lipoprotein-sorting protein n=1 Tax=Candidatus Desulfatibia vada TaxID=2841696 RepID=A0A8J6NSE4_9DELT) HSP 1 Score: 140 bits (353), Expect = 1.030e-36 Identity = 82/247 (33.20%), Postives = 135/247 (54.66%), Query Frame = 1
Query: 13 SLAVLACLCVSAQAQTGRELVEESLRRQAPPPSVYEERVLLLIDSLGQHTVRTARYYSRLD-SAGLRRLMVIDTPRELRGIRLYVSRDAGGG---------------ARNGPAASSPVFGSDYTVADFEGEQPQDFNYEREDNQELDRVTHLVVRATPRDEAVARATGYGVRRIYLRKDNLFVSRIDCLDRQGRIAKRLTFKDPRPDDTGAWRPGMTLTEDLREDRRTLLKVERRVHSADYVPAGVF 705
SL V + ++ + TG +++E +R P V+E++ ++LIDS VR AR +SR++ A ++ L++ D P E+RG+ L R G + +G + + G+D+ + D E DF Y R+ + ++ ++ + VV A P+D + RATGYG+RR ++R+DN ++ R D D +GR KR T D + D WR M L E+ +E +TL+K+ +RV S DYVP +F
Sbjct: 29 SLPVFSKSLLADETWTGPTIMDEVFKRHELFPYVFEKQTMILIDSAENRDVRKARRFSRVEPDATVKYLLIFDHPAEIRGVALLAIRHPSGRIESKIYLPAFGKELKSTSGKSRGNHFLGTDFAIEDLTAEVLSDFRYVRKTDYKIGKILYFVVEAFPKDSQIERATGYGLRRHFVRQDNFYIVRTDYYDPRGRFLKRRTHHDLKMVDGTMWRANMILMENHKEQHKTLIKINQRVFSHDYVPPEMF 275
BLAST of mRNA_P-wetherbeei_contig6481.1.1 vs. uniprot
Match: A0A521RJ24_9GAMM (Outer membrane lipoprotein-sorting protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521RJ24_9GAMM) HSP 1 Score: 137 bits (346), Expect = 2.490e-35 Identity = 88/233 (37.77%), Postives = 122/233 (52.36%), Query Frame = 1
Query: 61 GRELVEESLRRQAPPPSVYEERVLLLIDSLGQHTVRTARYYSRLDSAGLRRLMVI-DTPRELRGIRLYVSRDAGGGARN-------GP--------AASSPVFGSDYTVADFEGEQPQDFNYEREDNQELDRVTHLVVRATPRDEAVARATGYGVRRIYLRKDNLFVSRIDCLDRQGRIAKRLTFKDPRPDDTGAWRPGMTLTEDLREDRRTLLKVERRVHSADYVPAGVFEA 711
GR++++E RR P +YEE+ +++ D LG R YSR + G R MVI PRE++G+ + +R+ G GP +S + GSD+T+ D GE P + Y R +Q LD H +V P A + T RR Y+RKDN ++R D DR G + KR + D + D WRPGMT+ D R +TLLKV+RRV S DYVPA +F A
Sbjct: 71 GRQIMDEVQRRHGQYPYIYEEQSIVMEDKLGNRDTRKLNRYSRTEEDGTVRFMVIFQYPREVQGVAMLANRNPDGSVFKAVYLPALGPKLYESSATGSSGTLMGSDFTIEDLTGEIPGEQQYLRRPDQGLDGAAHFIVDVFPAGVAPGKETIQ--RRHYVRKDNFVIARTDHFDRNGDVLKRQSMHDFKQIDGEMWRPGMTIMVDQRTLHQTLLKVDRRVFSRDYVPAEMFSA 301
BLAST of mRNA_P-wetherbeei_contig6481.1.1 vs. uniprot
Match: A0A2D9JKU7_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2D9JKU7_9GAMM) HSP 1 Score: 130 bits (328), Expect = 4.140e-33 Identity = 81/232 (34.91%), Postives = 122/232 (52.59%), Query Frame = 1
Query: 61 GRELVEESLRRQAPPPSVYEERVLLLIDSLGQHTVRTARYYSRLDS-AGLRRLMVIDTPRELRGIRLYVSRDAGGGARN---------------GPAASSPVFGSDYTVADFEGEQPQDFNYEREDNQELDRVTHLVVRATPRDEAVARATGYGVRRIYLRKDNLFVSRIDCLDRQGRIAKRLTFKDPRPDDTGAWRPGMTLTEDLREDRRTLLKVERRVHSADYVPAGVFE 708
G ++ E +RR P VYEE+ ++LID G VR AR Y R++ ++ L+V P E+RG+ L R + G RN G + G+D+ V D E +F+Y R + + V + V A PR++A+ + T YG+RR +RKDN +++ D DR R KRLT+ D + +WR M + R + TLLK++RRV+S DYVP+ +FE
Sbjct: 47 GAAIMAEQVRRHQQFPYVYEEQTMVLIDKTGHRRVRKARRYMRVEKDLSVKFLLVFLDPEEIRGVALLARRTSVGVMRNHMYLPAFGQQMKSPSGDGRTGAFLGTDFAVEDLTVEIASEFSYLRVKDIRKEGVEYFQVEAHPRNKAIGKTTSYGLRRHRVRKDNFMITQTDFYDRNLRFLKRLTYHDLKRVYGESWRANMLVMNHGRNNHTTLLKIDRRVYSRDYVPSELFE 278
BLAST of mRNA_P-wetherbeei_contig6481.1.1 vs. uniprot
Match: A0A3C0T5N4_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3C0T5N4_9GAMM) HSP 1 Score: 129 bits (324), Expect = 1.150e-32 Identity = 84/237 (35.44%), Postives = 122/237 (51.48%), Query Frame = 1
Query: 52 AQTGRELVEESLRRQAPPPSVYEERVLLLIDSLGQHTVRTARYYSRLDSAG-LRRLMVIDTPRELRGIRLYVSRDAGG------------------GARNGPAASSPVFGSDYTVADFEGEQPQDFNYEREDNQELDRVTHLVVRATPRDEAVARATGYGVRRIYLRKDNLFVSRIDCLDRQGRIAKRLTFKDPRPDDTGAWRPGMTLTEDLREDRRTLLKVERRVHSADYVPAGVF 705
A TGR++++ R P VYEE+ ++LID GQ RT R YSR ++ G + L++ D+P E+ G+ + R+A G G A G+D+T+ GE D+ + R+ + + V + VV DE G +RR Y+ KD+L+VSR D LD GR+ KR T D P WR M L E+ ++D RT++K++RRV SADYVP VF
Sbjct: 30 ASTGRQVMDAVYERHQQYPYVYEEQSMVLIDRQGQRETRTLRRYSRAEATGDVNFLLLFDSPGEVEGVAMLAKREADGTVSQSVYLPAFGGSFVKSGGECNVACGDNFLGTDFTIESLTGEVLDDYEHVRQTDLYMGDVEYYVVDVHLPDE------GLPLRRHYVLKDSLYVSRTDHLDDLGRVRKRQTHHDLSPVHGDMWRANMMLMENHQDDHRTVIKIDRRVFSADYVPPQVF 260
BLAST of mRNA_P-wetherbeei_contig6481.1.1 vs. uniprot
Match: A0A349KQJ2_9GAMM (Uncharacterized protein n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A349KQJ2_9GAMM) HSP 1 Score: 115 bits (289), Expect = 1.410e-27 Identity = 76/235 (32.34%), Postives = 119/235 (50.64%), Query Frame = 1
Query: 58 TGRELVEESLRRQAPPPSVYEERVLLLIDSLGQHTVRTARYYSRLDSAG-LRRLMVIDTPRELRGIRLYVSRDAGGGARN----------------GPAASSP--VFGSDYTVADFEGEQPQDFNYEREDNQELDRVTHLVVRATPRDEAVARATGYGVRRIYLRKDNLFVSRIDCLDRQGRIAKRLTFKDPRPDDTGAWRPGMTLTEDLREDRRTLLKVERRVHSADYVPAGVF 705
+GREL+E R P VYEE+ ++LID G R R YSR + +G + L++ D+P +++G+ L R+ G ++ GP S G+DY++++ G+ + R ++ ++ + VV D A RR Y+RKDNL++SR D D GR+ KR T D WR M + ++L+++ RT++K+ RRV SADYVP VF
Sbjct: 31 SGRELLELVYERHQQYPYVYEEQSMILIDQNGHKNTRKLRRYSRANESGTVNFLLLFDSPLDVKGVALLAQREQDGQSKQSFYLPAFGENFIENTPGPEGKSEDNFLGTDYSISNLVGDTLDHHKHVRRNDTTINETDYFVVDVYDLDSP---AEDKPERRHYIRKDNLYISRTDHFDEIGRLQKRQTNHDLTKVHGDMWRANMMMMDNLQKEHRTIIKINRRVFSADYVPGEVF 262
BLAST of mRNA_P-wetherbeei_contig6481.1.1 vs. uniprot
Match: A0A1G0JYA4_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium RIFCSPLOWO2_02_FULL_61_13 TaxID=1798300 RepID=A0A1G0JYA4_9GAMM) HSP 1 Score: 115 bits (289), Expect = 1.740e-27 Identity = 77/232 (33.19%), Postives = 125/232 (53.88%), Query Frame = 1
Query: 58 TGRELVEESLRRQAPPPSVYEERVLLLIDSLGQHTVRTARYYSRLDSAG-LRRLMVIDTPRELRGIRLYVSRDAGGGARNG---PA------ASSP------VFGSDYTVADFEGEQPQDFNYEREDNQELDRVTHLVVRATPRDEAVARATGYGVRRIYLRKDNLFVSRIDCLDRQGRIAKRLTFKDPRPDDTGAWRPGMTLTEDLREDRRTLLKVERRVHSADYVPAGVF 705
+G ++++E RQ P +YEE+ ++L+D G RTAR YSR+++ G ++ L+V +TP ++G+ L RDA G + PA AS P G+D++V GE ++ Y R D+ EL+ + V + A+ +RR ++R+DNLF++R D D +G + +R D + D W + L +D RE +TL+KV+RR+ S DYVP +F
Sbjct: 28 SGPQIMQEVHARQHLYPYIYEEQSIVLVDRNGFRDTRTARRYSRIEADGSIQLLLVFETPIPVKGVALLARRDATGMVTSQLYLPALGQQLIASDPGDHGSGFMGTDFSVESLTGELLSEYLYVRSDDLELENQAYFSVDVYRAGDNPAKTRP--LRRHFIRQDNLFITRSDHFDARGEVVRRQRSYDLKVVDGSMWHANLMLMDDYREQHQTLIKVDRRIFSRDYVPTEMF 257 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6481.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6481.1.1 >prot_P-wetherbeei_contig6481.1.1 ID=prot_P-wetherbeei_contig6481.1.1|Name=mRNA_P-wetherbeei_contig6481.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=238bp MASLAVLACLCVSAQAQTGRELVEESLRRQAPPPSVYEERVLLLIDSLGQback to top mRNA from alignment at P-wetherbeei_contig6481:789..1508- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6481.1.1 ID=mRNA_P-wetherbeei_contig6481.1.1|Name=mRNA_P-wetherbeei_contig6481.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=720bp|location=Sequence derived from alignment at P-wetherbeei_contig6481:789..1508- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6481:789..1508- >mRNA_P-wetherbeei_contig6481.1.1 ID=mRNA_P-wetherbeei_contig6481.1.1|Name=mRNA_P-wetherbeei_contig6481.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=714bp|location=Sequence derived from alignment at P-wetherbeei_contig6481:789..1508- (Phaeothamnion wetherbeei SAG_119_79)back to top |