mRNA_P-wetherbeei_contig648.8.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig648.8.1
Unique NamemRNA_P-wetherbeei_contig648.8.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig648.8.1 vs. uniprot
Match: A0A835YY46_9STRA (Aquaporin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY46_9STRA)

HSP 1 Score: 221 bits (562), Expect = 1.410e-63
Identity = 118/244 (48.36%), Postives = 154/244 (63.11%), Query Frame = 2
Query:  470 GIFTEFFCTMLFLFFNIAQLTFLRQGDVAEVTAGNLDSSSRLIIAMQFGVSIFVLVYFAAGISGAHINPAVTWGMLVGNRISVVRGLFYIGAQIAGATVGTGFAKALNPDGYDKAGGGANGLGAGVTQGQGLLAEIAGTMLLVLVVFTATNGYLGTKLAHIPAMLPWSIGMAVFIAHLSLIPITGCSINPARSFGPALVTGDWANQWIFWVGPLIGATIATLLFELVFRLPEPRDRDNVADPPA 1201
            GI  E   T LFL+  I  + F+R  +++EV  G   S+ RL+IA  FG++IFVLVY  A +SGA+INPAV+WG+ +G RI++ R   YI AQ  GA +G G A +++   + +  GGAN +   V   Q L  EI  T LLV VV  ATN  L     H   +LPW IGM V + H +L+P+ GCSINPARSFG A++T  W + W+FW+GPLIGATIATLLFE + R PEP  +    DP A
Sbjct:   30 GIVGELIATTLFLYVCITTVVFMRIDNISEVNNGATGSTERLLIAFNFGLAIFVLVYLFADVSGANINPAVSWGLCLGKRITLKRCGLYIIAQCLGAIIGVGLACSMSKAHFWETNGGANVVNNQVGAHQALGGEILCTWLLVTVVLCATNPGLQKAYVHQAVLLPWVIGMTVMLCHFTLVPVDGCSINPARSFGSAIITNTWKDHWVFWLGPLIGATIATLLFEAILRPPEPAPKLEAEDPQA 273          
BLAST of mRNA_P-wetherbeei_contig648.8.1 vs. uniprot
Match: I0ZAA7_COCSC (Plasma membrane intrinsic protein n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0ZAA7_COCSC)

HSP 1 Score: 209 bits (533), Expect = 4.090e-59
Identity = 117/244 (47.95%), Postives = 148/244 (60.66%), Query Frame = 2
Query:  464 AIGIFTEFFCTMLFLFFNIAQLTF--------LRQG-----DVAEVTAGNLDSSSRLIIAMQFGVSIFVLVYFAAGISGAHINPAVTWGMLVGNRISVVRGLFYIGAQIAGATVGTGFAKALNPDGYDKAGGGANGLGAGVTQGQGLLAEIAGTMLLVLVVFTATNGYLGTKLAHIPAMLPWSIGMAVFIAHLSLIPITGCSINPARSFGPALVTGDWANQWIFWVGPLIGATIATLLFELVFR 1156
            A  +  E+  T +FLFF I  ++          R G     D A      L +S+ L IA+ FG SIFVLVY AA  SG HINPAVT+GM V  +ISV+R + Y+ AQ  GA  G G  +A++ DG+  AGGGAN L  G  +  G   E   TM LV  VF AT+    T  AH+P + P++IGM VF+ HL  IP+ GCSINPARSFG A V+G W NQW+FWVGPL GA +A  ++EL+FR
Sbjct:   23 AKAVVAEYAVTTMFLFFTIGTVSSNCHTLDNASRSGADKSLDSAGFGTCFLGTSNVLNIAIAFGFSIFVLVYCAASFSGGHINPAVTFGMFVARKISVLRAVLYMVAQCLGACTGAGLVRAIDDDGWRAAGGGANALSPGFGEAAGWGLETILTMALVFTVFAATDSERATDTAHLPVLAPFAIGMVVFLCHLVAIPLDGCSINPARSFGAAAVSGSWDNQWVFWVGPLSGAVLAAAIYELIFR 266          
BLAST of mRNA_P-wetherbeei_contig648.8.1 vs. uniprot
Match: A0A8J9WPI2_9CHLO (Aquaporin PIP2-5 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WPI2_9CHLO)

HSP 1 Score: 207 bits (526), Expect = 4.130e-58
Identity = 118/242 (48.76%), Postives = 144/242 (59.50%), Query Frame = 2
Query:  470 GIFTEFFCTMLFLFFNIAQLTF---------LRQGDVAEVTAGN----LDSSSRLIIAMQFGVSIFVLVYFAAGISGAHINPAVTWGMLVGNRISVVRGLFYIGAQIAGATVGTGFAKALNPDGYDKAGGGANGLGAGVTQGQGLLAEIAGTMLLVLVVFTATNGYLGTKLAHIPAMLPWSIGMAVFIAHLSLIPITGCSINPARSFGPALVTGDWANQWIFWVGPLIGATIATLLFELVFR 1156
             +  E+  T LFLFF I  ++          L   D +  +AG     L + + L IAM FG SIFVLVY AA  SG HINPAVT+GMLV  +ISV R + YI AQ  GA  G G  KA++  G+  AGGG N L AGV    G   E   TM LV  VF AT+    +  AH+P + P++IGM VF+ HL  IP+ GCSINPARSFG A V G W +QW+FWVGPL GA +A   +EL FR
Sbjct:   24 AVVAEYAVTTLFLFFTIGTVSSNCHTADNASLAGADKSLESAGYGTCFLGTGNVLNIAMAFGFSIFVLVYCAASFSGGHINPAVTFGMLVARKISVSRAVLYIVAQCLGACTGAGLVKAIDTHGWRAAGGGTNALSAGVNNAAGWGLETILTMALVFTVFAATDAERASDTAHLPVLAPFAIGMVVFLCHLVAIPLDGCSINPARSFGAAAVAGKWDDQWVFWVGPLCGAVMAATAYELFFR 265          
BLAST of mRNA_P-wetherbeei_contig648.8.1 vs. uniprot
Match: A0A836CE69_9STRA (Transmembrane channel protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE69_9STRA)

HSP 1 Score: 203 bits (517), Expect = 1.280e-56
Identity = 117/271 (43.17%), Postives = 167/271 (61.62%), Query Frame = 2
Query:  377 EGANVVYERRYELGFDF-SERCNSYTLKDNAIGIFTEFFCTMLFLFFNIAQLTFLRQGDVAEVTAGNLDSSSRLIIAMQFGVSIFVLVYFAAGISGAHINPAVTWGMLVGNRISVVRGLFYIGAQIAGATVGTGFAKAL-NPDGYDKAGGGANGLGAGVTQGQGLLAEIAGTMLLVLVVFTATNGYLGTKLAHI------PAMLPWSIGMAVFIAHLSLIPITGCSINPARSFGPALVTGDWANQWIFWVGPLIGATIATLLFELVFRLPE 1165
            E   VV +R  +LGF    ER +SY  +     +  E      FL+  I  + +   G +  +     DS  +L+IA+ FG+SIF+LVYF AG+SG ++NPAVT+ +++G RISV RG+ YI +Q+ GA VGT FA  +   D ++   GGAN L  GV+ GQ L AEI  T ++ L V       L ++L H+        +LP ++G A+ +AH+ LIPI GCS+NPARSFG A+++G+WA+ WIFWVGPLIG  +A LL+EL+ R P+
Sbjct:   30 EEEGVVKKRACQLGFVLLEERFDSYFFR----AVLVEGLAMAAFLYNVITVIAYNDDGQLVGI-----DSDKQLLIALVFGLSIFMLVYFTAGLSGGNLNPAVTFSLVIGKRISVARGICYIASQMVGAIVGTAFALVIAGSDKFNAVNGGANILAVGVSAGQALFAEILSTAMVCLAVIIG----LSSELWHLMEKTGMDILLPIAVGTAIVLAHMVLIPIDGCSVNPARSFGAAVISGEWADMWIFWVGPLIGGLVAILLWELILRPPQ 287          
BLAST of mRNA_P-wetherbeei_contig648.8.1 vs. uniprot
Match: B3XXK5_TULGE (Plasma membrane intrinsic protein n=2 Tax=Liliaceae TaxID=4677 RepID=B3XXK5_TULGE)

HSP 1 Score: 201 bits (512), Expect = 2.200e-56
Identity = 110/234 (47.01%), Postives = 143/234 (61.11%), Query Frame = 2
Query:  470 GIFTEFFCTMLFLFFNIAQLTFLRQGDVAEVTAGNL--DSSSRLIIAMQFGVSIFVLVYFAAGISGAHINPAVTWGMLVGNRISVVRGLFYIGAQIAGATVGTGFAKALNPDGYDKAGGGANGLGAGVTQGQGLLAEIAGTMLLVLVVFTATNGYLGTKLAHIPAMLPWSIGMAVFIAHLSLIPITGCSINPARSFGPALVTGD---WANQWIFWVGPLIGATIATLLFELVFR 1156
             +  EF  T+LFL+  +A +   +      ++  N   +    L IA  FG  IF+LVY  AGISG HINPAVT+G+LVG ++S++R +FY+ AQ  GA  G GF KA     Y + GGGAN L AG ++G GL AEI GT +LV  VF AT+     + +H+P + P  IG AVF+ HL+ IPITG  INPARSFG A++      W +QWIFWVGP IGA IA    + V R
Sbjct:   41 AVIAEFIATLLFLYITVATVIGYKHQSDPNLSTPNAGCEGVGLLGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLLVGRKVSLIRAVFYMVAQCLGAICGVGFVKAFQKAFYVRYGGGANELSAGYSKGTGLAAEIIGTFVLVYTVFAATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIYNKDKAWDDQWIFWVGPFIGAAIAAAYHQYVLR 274          
BLAST of mRNA_P-wetherbeei_contig648.8.1 vs. uniprot
Match: V5RE88_CUCSA (Plasma intrinsic protein 2-7 n=5 Tax=Cucurbitaceae TaxID=3650 RepID=V5RE88_CUCSA)

HSP 1 Score: 200 bits (509), Expect = 5.820e-56
Identity = 110/233 (47.21%), Postives = 141/233 (60.52%), Query Frame = 2
Query:  470 GIFTEFFCTMLFLFFNIAQLT-FLRQGDVAEVTAGNLDSSSRLIIAMQFGVSIFVLVYFAAGISGAHINPAVTWGMLVGNRISVVRGLFYIGAQIAGATVGTGFAKALNPDGYDKAGGGANGLGAGVTQGQGLLAEIAGTMLLVLVVFTATNGYLGTKLAHIPAMLPWSIGMAVFIAHLSLIPITGCSINPARSFGPALVTG---DWANQWIFWVGPLIGATIATLLFELVFR 1156
             I  EF  T+LFL+  I  +  +  Q D  +  A   D    L IA  FG  IFVLVY  AGISG HINPAVT+G+ +  ++S+VR + Y+ AQ  GA  G G  KA     Y+K GGGAN L  G ++G GL AEI GT +LV  VF+AT+     + +H+P + P  IG AVF+ HL+ IPITG SINPARSFGPA++      W + WIFWVGP +GA IA    + + R
Sbjct:   39 AIIAEFIATLLFLYVTILTIIGYNSQTDTDKPGANACDGVGILGIAWSFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVAYMVAQCLGAVCGAGLVKAFQKGYYNKYGGGANQLAHGYSKGTGLGAEIVGTFILVYTVFSATDSKRNARDSHVPVLAPLPIGFAVFMVHLATIPITGTSINPARSFGPAVILNREKPWDDHWIFWVGPFVGAAIAAFYHQFILR 271          
BLAST of mRNA_P-wetherbeei_contig648.8.1 vs. uniprot
Match: A0A251T8B7_HELAN (Putative major intrinsic protein, Aquaporin-like protein n=1 Tax=Helianthus annuus TaxID=4232 RepID=A0A251T8B7_HELAN)

HSP 1 Score: 199 bits (507), Expect = 1.040e-55
Identity = 109/233 (46.78%), Postives = 142/233 (60.94%), Query Frame = 2
Query:  470 GIFTEFFCTMLFLFFNIAQLT-FLRQGDVAEVTAGNLDSSSRLIIAMQFGVSIFVLVYFAAGISGAHINPAVTWGMLVGNRISVVRGLFYIGAQIAGATVGTGFAKALNPDGYDKAGGGANGLGAGVTQGQGLLAEIAGTMLLVLVVFTATNGYLGTKLAHIPAMLPWSIGMAVFIAHLSLIPITGCSINPARSFGPALVTGD---WANQWIFWVGPLIGATIATLLFELVFR 1156
             +  EF  T LFL+  +  +  +    D A + A        L IA  FG  IFVLVY  AGISG HINPAVT+G+ +  ++S++R + Y+ AQ  GA  G G  KA N   Y++ GGGAN L AG ++G GL AEI GT +LV  VF+AT+     + +HIP + P  IG AVF+ HL+ IPITG  INPARS G A++ G    W +QWIFWVGPL+GATIA    + + R
Sbjct:   36 ALIAEFIATFLFLYITVLTVIGYKSTTDPAALNADQCGGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLIRAIMYMVAQCLGAICGVGLVKAFNKSLYNRYGGGANELAAGYSKGTGLGAEIIGTFVLVYTVFSATDPKRSARDSHIPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYGKEKAWDDQWIFWVGPLVGATIAAFYHQFILR 268          
BLAST of mRNA_P-wetherbeei_contig648.8.1 vs. uniprot
Match: G7JPC5_MEDTR (Major intrinsic protein (MIP) family transporter n=9 Tax=IRL clade TaxID=2233839 RepID=G7JPC5_MEDTR)

HSP 1 Score: 199 bits (507), Expect = 1.070e-55
Identity = 108/234 (46.15%), Postives = 145/234 (61.97%), Query Frame = 2
Query:  470 GIFTEFFCTMLFLFFNIAQLTFLRQGDVAEVTAGNLDSSSRLI--IAMQFGVSIFVLVYFAAGISGAHINPAVTWGMLVGNRISVVRGLFYIGAQIAGATVGTGFAKALNPDGYDKAGGGANGLGAGVTQGQGLLAEIAGTMLLVLVVFTATNGYLGTKLAHIPAMLPWSIGMAVFIAHLSLIPITGCSINPARSFGPALVTGD---WANQWIFWVGPLIGATIATLLFELVFR 1156
             +  EF  T+LFL+  +  LT +     ++  AG  D     I  IA  FG  IF+LVY  AGISG HINPAVT+G+ VG ++S++R +FY+ AQ AGA  GTG AK      +D+ GGGAN +  G  +G  L AEI GT +LV  VF+AT+     + +H+P + P  IG AVF+ HL+ IP+TG  INPARSFG A++  D   W +QWIFWVGP IGA +A +  + + R
Sbjct:   40 ALIAEFVATLLFLY--VTVLTIIGYSHQSDPKAGGTDCDGVGILGIAWAFGGMIFILVYCTAGISGGHINPAVTFGLFVGRKVSLIRAVFYMAAQSAGAICGTGLAKGFQKAYFDRYGGGANFVHDGYNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSHVPVLAPLPIGFAVFMVHLATIPVTGTGINPARSFGSAVIYNDGKIWDDQWIFWVGPFIGAAVAAIYHQYILR 271          
BLAST of mRNA_P-wetherbeei_contig648.8.1 vs. uniprot
Match: A0A6J1HT90_CUCMA (aquaporin PIP2-1-like n=3 Tax=Cucurbita TaxID=3660 RepID=A0A6J1HT90_CUCMA)

HSP 1 Score: 199 bits (506), Expect = 1.370e-55
Identity = 111/233 (47.64%), Postives = 144/233 (61.80%), Query Frame = 2
Query:  470 GIFTEFFCTMLFLFFNIAQLT-FLRQGDVAEVTAGNLDSSSRLIIAMQFGVSIFVLVYFAAGISGAHINPAVTWGMLVGNRISVVRGLFYIGAQIAGATVGTGFAKALNPDGYDKAGGGANGLGAGVTQGQGLLAEIAGTMLLVLVVFTATNGYLGTKLAHIPAMLPWSIGMAVFIAHLSLIPITGCSINPARSFGPALVTG---DWANQWIFWVGPLIGATIATLLFELVFR 1156
             +  EF  T+LFL+  I  +     Q D  ++          L IA  FG  IF+LVY  AGISG HINPAVT+G+ +  ++S+VR + Y+ AQ  GA  GTG  KAL  D ++K GGGAN L  G ++G GL AEI GT +LV  VF+AT+     + +H+P + P SIG AVF+ HL+ IPITG SINPARSFGPA++      W + W+FWVGP IGA IA L  + V R
Sbjct:   38 ALIAEFVATLLFLYITILIIIGHSSQSDPHKLGGNACGGVGILGIAWGFGGMIFILVYCTAGISGGHINPAVTFGLFLARKVSLVRAVAYMIAQCLGAICGTGLVKALQRDYFNKYGGGANQLAHGYSKGAGLGAEIIGTFILVYTVFSATDAKRNARDSHVPILAPLSIGFAVFMVHLATIPITGTSINPARSFGPAVILNREKPWDDHWMFWVGPFIGAAIAALYHQFVLR 270          
BLAST of mRNA_P-wetherbeei_contig648.8.1 vs. uniprot
Match: A0A1S3TCW1_VIGRR (aquaporin PIP2-7-like n=5 Tax=Vigna TaxID=3913 RepID=A0A1S3TCW1_VIGRR)

HSP 1 Score: 199 bits (505), Expect = 1.700e-55
Identity = 106/232 (45.69%), Postives = 145/232 (62.50%), Query Frame = 2
Query:  470 GIFTEFFCTMLFLFFNIAQLTFLRQGDVAEVTAGNLDSSSRLIIAMQFGVSIFVLVYFAAGISGAHINPAVTWGMLVGNRISVVRGLFYIGAQIAGATVGTGFAKALNPDGYDKAGGGANGLGAGVTQGQGLLAEIAGTMLLVLVVFTATNGYLGTKLAHIPAMLPWSIGMAVFIAHLSLIPITGCSINPARSFGPALVTGD---WANQWIFWVGPLIGATIATLLFELVFR 1156
             I  EF  T+LFL+  +  LT +  G+  ++     D    + +A  FG  IF+LVY  AGISG HINPAVT+G+ +G ++S++R L YI AQ AGA  GTG AK      Y++ GGGAN +  G  +G  L AEI GT +LV  VF+AT+     + ++IP + P  IG AVF+ HL+ IP+TG  INPARSFG A++  D   W +QWIFWVGP++GA +A L  + + R
Sbjct:   37 AIIAEFIATLLFLY--VTVLTII--GNKRQIDTTQCDGVGIIGVAWAFGGMIFILVYCTAGISGGHINPAVTFGLFLGRKVSLIRALLYIVAQCAGAICGTGLAKVFQKTYYNRYGGGANFVADGCNKGTALGAEIIGTFVLVYTVFSATDPKRNARDSYIPVLAPLPIGFAVFVVHLATIPVTGTGINPARSFGAAVIYNDEKIWDDQWIFWVGPIVGAAVAALYHQYILR 264          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig648.8.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YY46_9STRA1.410e-6348.36Aquaporin n=1 Tax=Tribonema minus TaxID=303371 Rep... [more]
I0ZAA7_COCSC4.090e-5947.95Plasma membrane intrinsic protein n=1 Tax=Coccomyx... [more]
A0A8J9WPI2_9CHLO4.130e-5848.76Aquaporin PIP2-5 n=1 Tax=Coccomyxa sp. Obi TaxID=2... [more]
A0A836CE69_9STRA1.280e-5643.17Transmembrane channel protein n=1 Tax=Tribonema mi... [more]
B3XXK5_TULGE2.200e-5647.01Plasma membrane intrinsic protein n=2 Tax=Liliacea... [more]
V5RE88_CUCSA5.820e-5647.21Plasma intrinsic protein 2-7 n=5 Tax=Cucurbitaceae... [more]
A0A251T8B7_HELAN1.040e-5546.78Putative major intrinsic protein, Aquaporin-like p... [more]
G7JPC5_MEDTR1.070e-5546.15Major intrinsic protein (MIP) family transporter n... [more]
A0A6J1HT90_CUCMA1.370e-5547.64aquaporin PIP2-1-like n=3 Tax=Cucurbita TaxID=3660... [more]
A0A1S3TCW1_VIGRR1.700e-5545.69aquaporin PIP2-7-like n=5 Tax=Vigna TaxID=3913 Rep... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig648contigP-wetherbeei_contig648:4545..8688 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog248742.XP_005652120.1
Preferred namePIP2
PFAMsMIP
Model size1857
Max annot lvl33090|Viridiplantae
KEGG koko:K09872
KEGG TC1.A.8,1.A.8.11
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0005215,GO:0005372,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005773,GO:0005886,GO:0005887,GO:0005911,GO:0006810,GO:0006811,GO:0006833,GO:0006855,GO:0006950,GO:0007275,GO:0008150,GO:0009414,GO:0009415,GO:0009506,GO:0009507,GO:0009536,GO:0009605,GO:0009607,GO:0009624,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009737,GO:0009888,GO:0009987,GO:0010015,GO:0010033,GO:0010035,GO:0010053,GO:0010054,GO:0015250,GO:0015267,GO:0015318,GO:0015893,GO:0016020,GO:0016021,GO:0016043,GO:0016049,GO:0019899,GO:0021700,GO:0022607,GO:0022622,GO:0022803,GO:0022838,GO:0022857,GO:0030054,GO:0030154,GO:0031224,GO:0031225,GO:0031226,GO:0031625,GO:0032501,GO:0032502,GO:0032991,GO:0033993,GO:0034220,GO:0040007,GO:0042044,GO:0042221,GO:0042493,GO:0042891,GO:0043207,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043933,GO:0044085,GO:0044389,GO:0044424,GO:0044425,GO:0044444,GO:0044459,GO:0044464,GO:0046658,GO:0048364,GO:0048468,GO:0048469,GO:0048588,GO:0048589,GO:0048731,GO:0048764,GO:0048765,GO:0048767,GO:0048856,GO:0048869,GO:0050896,GO:0051179,GO:0051181,GO:0051234,GO:0051259,GO:0051260,GO:0051262,GO:0051289,GO:0051290,GO:0051291,GO:0051704,GO:0051707,GO:0055044,GO:0055085,GO:0060560,GO:0065003,GO:0071695,GO:0071840,GO:0071944,GO:0080147,GO:0080170,GO:0090558,GO:0090627,GO:0097159,GO:0097305,GO:0099402,GO:1901363,GO:1901700,GO:1905392
Exons7
Evalue1.47e-62
EggNOG OGsCOG0580@1|root,KOG0223@2759|Eukaryota,37I73@33090|Viridiplantae
DescriptionBelongs to the MIP aquaporin (TC 1.A.8) family
Cds size1104
COG categoryG
BRITEko00000,ko02000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig648.8.1prot_P-wetherbeei_contig648.8.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig648 4819..8209 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186916.4043024-UTR-P-wetherbeei_contig648:4544..48181683186916.4043024-UTR-P-wetherbeei_contig648:4544..4818Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig648 4545..4818 +
1683186916.4716957-UTR-P-wetherbeei_contig648:8209..86881683186916.4716957-UTR-P-wetherbeei_contig648:8209..8688Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig648 8210..8688 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186916.4142566-CDS-P-wetherbeei_contig648:4818..50141683186916.4142566-CDS-P-wetherbeei_contig648:4818..5014Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig648 4819..5014 +
1683186916.422639-CDS-P-wetherbeei_contig648:5332..54061683186916.422639-CDS-P-wetherbeei_contig648:5332..5406Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig648 5333..5406 +
1683186916.4307017-CDS-P-wetherbeei_contig648:5773..58791683186916.4307017-CDS-P-wetherbeei_contig648:5773..5879Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig648 5774..5879 +
1683186916.4390903-CDS-P-wetherbeei_contig648:6200..63511683186916.4390903-CDS-P-wetherbeei_contig648:6200..6351Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig648 6201..6351 +
1683186916.4476948-CDS-P-wetherbeei_contig648:6892..70341683186916.4476948-CDS-P-wetherbeei_contig648:6892..7034Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig648 6893..7034 +
1683186916.4557378-CDS-P-wetherbeei_contig648:7372..75161683186916.4557378-CDS-P-wetherbeei_contig648:7372..7516Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig648 7373..7516 +
1683186916.463738-CDS-P-wetherbeei_contig648:7918..82091683186916.463738-CDS-P-wetherbeei_contig648:7918..8209Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig648 7919..8209 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig648.8.1

>prot_P-wetherbeei_contig648.8.1 ID=prot_P-wetherbeei_contig648.8.1|Name=mRNA_P-wetherbeei_contig648.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=368bp
MVAKTEKTHRRRTDSEANVEALAAGGVGAIRRTYEGANVVYERRYELGFD
FSERCNSYTLKDNAIGIFTEFFCTMLFLFFNIAQLTFLRQGDVAEVTAGN
LDSSSRLIIAMQFGVSIFVLVYFAAGISGAHINPAVTWGMLVGNRISVVR
GLFYIGAQIAGATVGTGFAKALNPDGYDKAGGGANGLGAGVTQGQGLLAE
IAGTMLLVLVVFTATNGYLGTKLAHIPAMLPWSIGMAVFIAHLSLIPITG
CSINPARSFGPALVTGDWANQWIFWVGPLIGATIATLLFELVFRLPEPRD
RDNVADPPASSSAASNRSAVASAAYTDGGTRNSDGGSPSVAAAAAAATSF
NARPSLLKGIDEDGSPA*
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mRNA from alignment at P-wetherbeei_contig648:4545..8688+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig648.8.1 ID=mRNA_P-wetherbeei_contig648.8.1|Name=mRNA_P-wetherbeei_contig648.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4144bp|location=Sequence derived from alignment at P-wetherbeei_contig648:4545..8688+ (Phaeothamnion wetherbeei SAG_119_79)
CCTCGGTTCTCCAATCTCTTATGGCGTCTGACCTGGCTGTTTTGGAACAC ACTCACACTCAATTATCATCCGACTAGTGTCTCTCGGAGCCTCCACGCTC CTGCCGGGCACCAAGGGGCTCCTGCCCCTTTCGATTGACGCGATACCTTT CTCGTTTTCTCTGCTTCGACCCAATAAATAGGACGAGACGGCCCCGTCAC ATGGCAGCCACCGCCTGGTACACCGCCAGTCCCTTACGAGCGAAGGCATT GCGCGCTTTCGGAGCGCCGGTCACATGGTGGCCAAGACGGAGAAGACGCA CCGTCGTCGCACGGACAGTGAGGCCAACGTTGAGGCGCTTGCCGCAGGCG GAGTCGGTGCCATCCGGCGGACGTACGAAGGCGCCAACGTCGTCTACGAA CGCCGTTACGAACTGGGCTTTGATTTCAGCGAACGGTGCAACAGCTACAC GCTTAAGGACAACGCGATCGGTGAGTAACGGATACTCCTACACGCATGCG CTTTATCTGAGACGCGACTTGCAACGCACCTTGCAGGTCCAGGAAGCTGA GACTTCCGAGCCGCACATCGAAGGTCTTTCACATGGGATTTTAGATGCCG CCTGGCACTGCCTGCGCCTTCACCGGTTAATATACCTCATGCCCGCCGTC ATGACCGGCGACCAGCAACGCATCGGGTACCCTTTGAAATCCATGCCGCA GGTTGCGGGACATTCTCCTGGCCCCATTTTTCTCATCTGCTCATGCCGCC GGCTGTTACGCGGCTGCAAATCTTCTTCTTTCTTTCAGGCATCTTCACGG AGTTCTTTTGCACCATGCTCTTCCTCTTCTTCAACATCGCCCAGTTGACC TTCCTGCGACAGGTACGGGCGTAAATGCACCGCGACTCGTTTTTTCAAGA ACTGATTTGTCGGCTGACTGCTCGCAGGGAGCTTCTGCACTCGCGCCGTT GTCACATCCCACTTTGTAAGATGGGAACCAACGGGTCGCACGTCTCGTCC CCTGCTGATGCGTTATGTGGACTCTCCGCCTCCTCGCCCCCGTCACCACC GTTATTGCTGCCGCCGTCACCTGCTGCCGCCACCGCCATTGTTGTCGCCG TCACTGCCGCCGCTACCGCCGCCGCCGCCGCCGCTACCGCCGTCGGCGCT GCCACTGGATGCCCCTGCCGTCACCCCCCAACTGGATGCCGCTGGTCATC CGCAAATGGGCTGGCCCGCCGGCCCGCAGGGCGACGTGGCGGAGGTTACG GCAGGCAATTTGGATTCGTCGAGCCGCCTTATTATCGCGATGCAGTTTGG CGTCTCGATCTTCGTCCTCGTCTACTTCGCCGCCGGTGCGTTTTGCATCT TTTCTATTTGTATCTGTCCTGTCTTCGCCGTCCGTCGCAGTGTTGGTCCT GCCACGGCGGACCCAGGTGGCGTCTCCGCCGCGGTTTCCCAGCCCGGAGC GCCATCCTGATTTTTCCTCGTTAATAAGGGCGGCACAACTGGTTACATCT GCCTGCCGGCGCCGCGCCCGATCGCTCCAATTTCGACTCATTTCCGGTTG TGGCATACGAAACTTCATTTTAACCGTTTGAACCGCCCAATCGTCAGCCG CTGGTGCACGGGCGCTGAACCGGTCAAAACGAACCCGTTCTTTGGTCTGC CGGCAGGTATTTCGGGCGCACACATCAACCCGGCTGTCACGTGGGGAATG CTTGTGGGCAACCGGATATCTGTTGTTCGTGGCCTCTTCTACATTGGCGC GCAAATCGCCGGAGCCACAGTTGGGACCGGCTTCGCTAAGGCGCTAAACC CCGACGGGTGAGTATGCCTGTGGAAAGCAGCCGAGTCCTTTGGAAAAGAG CTTGGCAGGACAGTTGTGCAAATCACTTTTTCCTTCCATAAAGTATTATC GATCGCTTTGTTGCTGATCTCTCGGGAGCGACCCGACATTGACACCCGTG GAGGAGCGAACCGCTCCTCTGGGCATGCTGATCGAAGCATGCCACGGCAG TTTGAGCCAGTTTCTCCTTCTACCGGTAGCATTCCATCTGCCTCCCAACA CGTTCATTTTCCCGCGTTTCTGGGTTGCGTTTGCTTTGCACCTTAGCTGG CCGAGTACTCTATTGTGAATAGCACCAGAGAAATACGGCGTTTGCGCTGC CATTACGTTGCCTACCTTGGGCTGCCTCGGGCTGGGCGCCGTCGTTGCTG GCGGCGTTCATTCCACACGGTCCTTCTCTTTCTCCATCATATCCTGTGCC ATCTGCGCCGCGTAAACCCTTGCCTATTTTCTTCGTTACCTTCAAACCCC TCTCTGCTTATTTTTCCACCGTGCAACCCCCGTCGACCCGTCGTCCAGGT ACGACAAGGCGGGCGGCGGCGCCAACGGTCTCGGGGCGGGCGTGACGCAG GGCCAAGGCCTGCTAGCAGAGATCGCTGGAACGATGCTGCTTGTGCTCGT TGTCTTCACCGCCACCAACGGATACCTTGGCACCAAGCTGGTGAGTCAGA AAGGGTGGGCGCCTGAAAATAGTTCATTTAATGAAAGAAAAGAGAGAGAG AGAGAGAGAGAGAGAGAGAGAGTGGCTGGCTCTAAAATGTAGACGCAGCG CGGTGCCTCCCGTCCGTGCCAGAATGTGTTACACTGCGGGCGCCAGATGC TGTCGATCTTCAGCGGTCCACCATTGGAACCCGCCACCGTTTACGACGCT CCAGCCGCTGCGTCCAGAGGGCTCCGTTCTGCCACATTGATAGCGATTGA CCAATCTCTTCTTCTATTCCCTCAACCTGCTCTCTCTTCCCACCGTTCCT GCCGCCCCGCGATGGGCTCGACTTTCAGGCCCACATTCCTGCGATGCTTC CATGGTCTATCGGCATGGCGGTCTTCATCGCGCATCTCTCTCTCATCCCC ATCACGGGTTGCTCCATCAACCCGGCGCGGTCGTTCGGCCCCGCCCTCGT CACCGGCGACTGGGCGAACCAGGCAAGTTTCGCGCTTGAGAGCACCGGTA CGATCGAAACCAAACTACTGGAGCAACATTGAGAACTAAATACGGGCCCC ATATTCGTCGTGTTTCTCCGGCGGCTACATCCCCCAGTGTAGCTATCCGC CAGTTCTTGAGCCGCCTTCTTTTGTCCAGTAGAGGCAGCTGCTGCCGCAA AGCAGCATTGCTCGTGATATTTTGGCCCTCTGCCATCACTCGCGGCTGTC GTTCCTGTTTCAGCATATTTTGTAACCCCTTAAAAGATGCTGCGACCCTT ACCTGGGTGTCCGGCCGCTCTTTCTACCGTTCATCAACCTTTGTGCCCTT TCCTCTGCTGCCGCCTTTGGTCTGTACGTCCCTCCTTCTTTCCCTGCCTC GCCGTCGGTCGTCCGGCCGAACAGTGGATCTTCTGGGTCGGTCCGCTGAT CGGCGCAACCATCGCTACCCTGCTCTTCGAACTCGTCTTCCGCTTGCCCG AGCCCCGCGACCGGGACAACGTCGCCGACCCGCCGGCTTCCTCCTCCGCC GCGTCCAATAGGAGCGCTGTCGCCAGCGCGGCCTACACGGACGGCGGCAC CAGAAACAGCGACGGCGGCAGCCCCAGCGTGGCGGCGGCCGCGGCGGCGG CCACGTCGTTCAATGCCCGCCCAAGCTTGCTGAAGGGTATTGACGAGGAC GGTTCACCCGCCTGACGCGAAAACTTTCTGGAAAGGTTCCCGGGGCGAGT GAATGCCGGCAGAGAAATTGGTGAACCGGCGGTAACGGCTTGAACCGGCA AAGGAGTGAAACTAGGTGCGGTTCGGCTGCCATTGACGTTCAAAAGTCTT TCATGAGCCAACCGGCAATCCCGGCCGGCGTGGTGTCAGCTCGCGGCCGT GGTAGTGGCGGCCATGCGGCGTGGCTGCGACGTCGGTGGTCGAGGGGAAA ACGGCGGCGATGACAGCGGCGGTGGGGAGGCAGGCGCTGCTGGCATACGC TTGCCGTGTAAGGTCCTCTATTCTGCTTTGGGGTTTTGGGAACGGGCTGA GAAAGCATCCGTCGACGTCTCGCGGCATATTGCGCGTTTCAAATACTGGA GCCAGAGAGCTTCTGCTTGAATCACGGGCTGGAATTTCGGCATCAGCAGC ATGTAGTTCAAAACTAATAAAGAGTAGCCCTGAAGATACAATGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig648:4545..8688+

>mRNA_P-wetherbeei_contig648.8.1 ID=mRNA_P-wetherbeei_contig648.8.1|Name=mRNA_P-wetherbeei_contig648.8.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1104bp|location=Sequence derived from alignment at P-wetherbeei_contig648:4545..8688+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGTGGCCAAGACGGAGAAGACGCACCGTCGTCGCACGGACAGTGAGGC
CAACGTTGAGGCGCTTGCCGCAGGCGGAGTCGGTGCCATCCGGCGGACGT
ACGAAGGCGCCAACGTCGTCTACGAACGCCGTTACGAACTGGGCTTTGAT
TTCAGCGAACGGTGCAACAGCTACACGCTTAAGGACAACGCGATCGGCAT
CTTCACGGAGTTCTTTTGCACCATGCTCTTCCTCTTCTTCAACATCGCCC
AGTTGACCTTCCTGCGACAGGGCGACGTGGCGGAGGTTACGGCAGGCAAT
TTGGATTCGTCGAGCCGCCTTATTATCGCGATGCAGTTTGGCGTCTCGAT
CTTCGTCCTCGTCTACTTCGCCGCCGGTATTTCGGGCGCACACATCAACC
CGGCTGTCACGTGGGGAATGCTTGTGGGCAACCGGATATCTGTTGTTCGT
GGCCTCTTCTACATTGGCGCGCAAATCGCCGGAGCCACAGTTGGGACCGG
CTTCGCTAAGGCGCTAAACCCCGACGGGTACGACAAGGCGGGCGGCGGCG
CCAACGGTCTCGGGGCGGGCGTGACGCAGGGCCAAGGCCTGCTAGCAGAG
ATCGCTGGAACGATGCTGCTTGTGCTCGTTGTCTTCACCGCCACCAACGG
ATACCTTGGCACCAAGCTGGCCCACATTCCTGCGATGCTTCCATGGTCTA
TCGGCATGGCGGTCTTCATCGCGCATCTCTCTCTCATCCCCATCACGGGT
TGCTCCATCAACCCGGCGCGGTCGTTCGGCCCCGCCCTCGTCACCGGCGA
CTGGGCGAACCAGTGGATCTTCTGGGTCGGTCCGCTGATCGGCGCAACCA
TCGCTACCCTGCTCTTCGAACTCGTCTTCCGCTTGCCCGAGCCCCGCGAC
CGGGACAACGTCGCCGACCCGCCGGCTTCCTCCTCCGCCGCGTCCAATAG
GAGCGCTGTCGCCAGCGCGGCCTACACGGACGGCGGCACCAGAAACAGCG
ACGGCGGCAGCCCCAGCGTGGCGGCGGCCGCGGCGGCGGCCACGTCGTTC
AATGCCCGCCCAAGCTTGCTGAAGGGTATTGACGAGGACGGTTCACCCGC
CTGA
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