mRNA_P-wetherbeei_contig6470.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6470.2.1 vs. uniprot
Match: K8YQC8_NANGC (Transcript antisense to ribosomal rna protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YQC8_NANGC) HSP 1 Score: 167 bits (423), Expect = 3.690e-50 Identity = 86/119 (72.27%), Postives = 89/119 (74.79%), Query Frame = 1
Query: 1 KVLCIFPSRYLFAIGLPPVFSFRWNLPPALSCNPKQLDSPKADRASGVPSTRGAVTLDGVVFQRTWPGAETGRASLDYNSGPARRPDLHVEHFPLRSPLLGESWLVSFPPLSYMLKSSG 357
KVLCIFPSRYLFAIGLPP+FS RWNLPPALSCNPKQLDS K R S G VTL G +FQ T + G SLDYNS P PD VE FPL SPLLGESWLVSFPPLSYMLKSSG
Sbjct: 36 KVLCIFPSRYLFAIGLPPIFSLRWNLPPALSCNPKQLDSSKTRRRRTHASMYGTVTLWGALFQGTCLASADGCVSLDYNSEPYNDPDFQVELFPLHSPLLGESWLVSFPPLSYMLKSSG 154
BLAST of mRNA_P-wetherbeei_contig6470.2.1 vs. uniprot
Match: A0A483A513_9GAMM (Uncharacterized protein n=1 Tax=uncultured SUP05 cluster bacterium TaxID=655186 RepID=A0A483A513_9GAMM) HSP 1 Score: 125 bits (314), Expect = 1.500e-33 Identity = 77/132 (58.33%), Postives = 90/132 (68.18%), Query Frame = -2
Query: 3 SIVAPPIKQEDPLDLSI*LSGGKETNQDSPSNGERSGKCSTCKSGLLAGPEL*SREAR-PVSAPGQVR*KTTPSRVTAPRVLGTPDARSA--FGESSCLGLQLKAGGKFHLKLNTGGRPIANKYREGKMQRT 389
+I P I+++ PL+LSI +SGGKETNQDSPSNGERSGK S+ KS EL EA P S ++ K T RV AP TP R+A FGES CLG+Q K GGK HLKLNTG RPIANKYREGK++ T
Sbjct: 23 NISEPQIRRDHPLNLSISISGGKETNQDSPSNGERSGKSSSLKSLACRARELWPGEAAVPESVLSKLTWKGTSKRVRAP--CATPPGRAATVFGESGCLGMQPKVGGKLHLKLNTGTRPIANKYREGKVKST 152
BLAST of mRNA_P-wetherbeei_contig6470.2.1 vs. uniprot
Match: A0A1C7LM27_GRIFR (Uncharacterized protein n=1 Tax=Grifola frondosa TaxID=5627 RepID=A0A1C7LM27_GRIFR) HSP 1 Score: 126 bits (317), Expect = 4.890e-33 Identity = 72/120 (60.00%), Postives = 79/120 (65.83%), Query Frame = 1
Query: 1 KVLCIFPSRYLFAIGLPPVFSFRWNLPPALSCNPKQLDSPKADRASGVPSTR-GAVTLDGVVFQRTWPGAETGRASLDYNSGPARRPDLHVEHFPLRSPLLGESWLVSFPPLSYMLKSSG 357
KVL IFPSRYLFAIGL P+FSFRWNLPP LSC PKQLDS +A + V + G +TL +FQ T + S DYNS R PD E FPL S LLGES LVSFPPL MLK SG
Sbjct: 125 KVLFIFPSRYLFAIGLSPIFSFRWNLPPILSCIPKQLDSSRAHHKALVVRVKDGILTLYDALFQETCTRSSAESTSPDYNSDGLRPPDFKFELFPLHSQLLGESLLVSFPPLIDMLKFSG 244
BLAST of mRNA_P-wetherbeei_contig6470.2.1 vs. uniprot
Match: A0A0R0GH08_SOYBN (Uncharacterized protein n=1 Tax=Glycine max TaxID=3847 RepID=A0A0R0GH08_SOYBN) HSP 1 Score: 126 bits (317), Expect = 2.920e-32 Identity = 85/170 (50.00%), Postives = 92/170 (54.12%), Query Frame = 1
Query: 1 KVLCIFPSRYLFAIGLPPVFSFRWNLPPALSCNPKQLDSPKADRASGVPSTRGAVTLDGVVFQRTWPGAETGRASLDYNSGPARRPDLHVEHFPLRSPLLGESWLVSFPPLSYMLKSSGSSCLIGGATMDVRECVQSFDDSLASAIRKTYRISLCSSSLWEPRHPSLKVV 510
KVL IFPSRYLFAIGL PVFS NLPP C PKQ DSP A R P T G + PG R L R D H FP+RSPLL ES LVSFPPL ML S+G L G CVQ D S SAI YRISL SSS+ EPR+P +V+
Sbjct: 100 KVLFIFPSRYLFAIGLSPVFSLGRNLPPDWGCIPKQPDSPTAPRVRQGPGTTGLSPSLAPPSRGLGPGPPL-RTLLQTTIRTPRATDFHGGLFPVRSPLLRESLLVSFPPLIDMLNSAGRRAL--GLMASGATCVQRLDGSRDSAIHTKYRISLRSSSMQEPRYPLPRVI 266
BLAST of mRNA_P-wetherbeei_contig6470.2.1 vs. uniprot
Match: A0A6G0W3G0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W3G0_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.780e-28 Identity = 66/119 (55.46%), Postives = 74/119 (62.18%), Query Frame = 1
Query: 1 KVLCIFPSRYLFAIGLPPVFSFRWNLPPALSCNPKQLDSPKADRASGVPSTRGAVTLDGVVFQRTWPGAETGRASLDYNSGPARRPDLHVEHFPLRSPLLGESWLVSFPPLSYMLKSSG 357
KVL IFPSRYLFAIGL P+FSFRWNLPPALSC PKQLDS KA R P R R + + ++ + G D +E FPL SPLL ES LVSFPPL+YMLK SG
Sbjct: 25 KVLFIFPSRYLFAIGLAPIFSFRWNLPPALSCIPKQLDSKKAYRTHRQPEQRREYHPPCCPLPR-----DLSQTTIRHLRG-----DFKLELFPLHSPLLRESLLVSFPPLNYMLKFSG 133
BLAST of mRNA_P-wetherbeei_contig6470.2.1 vs. uniprot
Match: K0S109_THAOC (Uncharacterized protein n=2 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0S109_THAOC) HSP 1 Score: 107 bits (268), Expect = 1.150e-26 Identity = 70/137 (51.09%), Postives = 73/137 (53.28%), Query Frame = 1
Query: 1 KVLCIFPSRYLFAIGLPPVFSFRWNLPPALSCNPKQLDSPKADRASGVP------------------STRGAVTLDGVVFQRTWPGAETGRASLDYNSGPARRPDLHVEHFPLRSPLLGESWLVSFPPLSYMLKSSG 357
KVLCIFPSRYL AIG+PP+FSFRWNLPP LSCNPKQLDS K G P T A L F R GA G D H E PL SPLLGES LVSFPPL+YMLK G
Sbjct: 39 KVLCIFPSRYLCAIGIPPIFSFRWNLPPTLSCNPKQLDSLK-----GYPWHKVLRQEREFHPLRFHFPTELASGLGRKHFSRPQFGAPEGCT------------DSHGELIPLHSPLLGESLLVSFPPLNYMLKFGG 158
BLAST of mRNA_P-wetherbeei_contig6470.2.1 vs. uniprot
Match: A0A6A5P2T1_LUPAL (Uncharacterized protein n=2 Tax=Lupinus albus TaxID=3870 RepID=A0A6A5P2T1_LUPAL) HSP 1 Score: 110 bits (275), Expect = 1.460e-25 Identity = 81/189 (42.86%), Postives = 92/189 (48.68%), Query Frame = 1
Query: 1 KVLCIFPSRYLFAIGLPPVFSFRWNLPPALSCNPKQLDSPKADRASGVPSTRGAVTLDGVVFQRTWPGAETGRASLDYNSG----------PARRPDLHVEHFPLRSPLL-GESWLVSFPPLSYMLKSSGS---------SCLIGGATMDVRECVQSFDDSLASAIRKTYRISLCSSSLWEPRHPSLKV 507
KVL IFPSRYLFAIGL PVFS NLPP C PKQ DSP A R + GA+TL G FQ TW + T AS DYNS P+RRP + R LL G P ++ + GAT CVQ D S SAI YRISL SSS+ EPR+P +V
Sbjct: 102 KVLFIFPSRYLFAIGLSPVFSLGRNLPPDWGCIPKQPDSPTAPRGATGSGHDGALTLSGAPFQGTWARSATEDASPDYNSDTEGVRFSCHHPSRRPPPRTQFSTNRETLLTGSQHSPRLVPSTWPRHGGNDVQHPGRRALGLMASGAT-----CVQRLDGSRDSAIHTKYRISLRSSSMQEPRYPLPRV 285
BLAST of mRNA_P-wetherbeei_contig6470.2.1 vs. uniprot
Match: A0A0L9VIF3_PHAAN (Uncharacterized protein n=1 Tax=Phaseolus angularis TaxID=3914 RepID=A0A0L9VIF3_PHAAN) HSP 1 Score: 108 bits (269), Expect = 1.510e-25 Identity = 76/170 (44.71%), Postives = 88/170 (51.76%), Query Frame = 1
Query: 1 KVLCIFPSRYLFAIGLPPVFSFRWNLPPALSCNPKQLDSPKADRASGVPSTRGAVTLDGVVFQRTWPGAETGRASLDYNSGPARRPDLHVEHFPLRSPLLGESWLVSFPPLSYMLKSSGSSCLIGGATMDVRECVQSFDDSLASAIRKTYRISLCSSSLWEPRHPSLKVV 510
KVL IFPSRYLFAIGL PVFS NLP C PKQ DSP A R + GA+TL G FQ TW + T ASLDYNS + + F SW + L +SG++C VQ D S S I YRISL SSS+ EPR+P L+VV
Sbjct: 61 KVLFIFPSRYLFAIGLSPVFSLGRNLPLDWGCIPKQPDSPTAPRGATGSGHNGALTLSGAPFQGTWAWSATEDASLDYNS------NAKGDRF---------SWWAVPGRRALGLVASGATC------------VQRLDGSRDSTIHTKYRISLRSSSMQEPRYPLLRVV 203
BLAST of mRNA_P-wetherbeei_contig6470.2.1 vs. uniprot
Match: A0A072THI8_MEDTR (Uncharacterized protein (Fragment) n=1 Tax=Medicago truncatula TaxID=3880 RepID=A0A072THI8_MEDTR) HSP 1 Score: 105 bits (263), Expect = 4.310e-25 Identity = 76/181 (41.99%), Postives = 90/181 (49.72%), Query Frame = 1
Query: 1 KVLCIFPSRYLFAIGLPPVFSFRWNLPPALSCNPKQLDSPKADRASGVPSTRGAVTLDGVVFQRTWPGAETGRASLDYNSG-----------PARRPDLHVEHFPLRSPLLGESWLVSFPPLSYMLKSSGSSCLIGGATMDVRECVQSFDDSLASAIRKTYRISLCSSSLWEPRHPSLKVV 510
+VL IFPSRYLFAIGL P+FS NLPP C PKQ DSP A R + GA+TL G FQ TW + AS DYNS PA PDL H E + + L +SG++C VQ D S SAI YRISL SSS+ EPR+P +V+
Sbjct: 7 QVLFIFPSRYLFAIGLSPIFSLGRNLPPDWGCIPKQPDSPTAPRGATGSEHNGALTLSGAPFQGTWVRSAAEDASPDYNSNAEGDRFSWWAYPAP-PDLRSHH---------ERYKTHVGRRALNLMASGATC------------VQRLDGSRDSAIHTKYRISLRSSSMQEPRYPLPRVI 165
BLAST of mRNA_P-wetherbeei_contig6470.2.1 vs. uniprot
Match: A0A072TIH7_MEDTR (Senescence-associated protein n=1 Tax=Medicago truncatula TaxID=3880 RepID=A0A072TIH7_MEDTR) HSP 1 Score: 108 bits (270), Expect = 2.830e-24 Identity = 77/181 (42.54%), Postives = 90/181 (49.72%), Query Frame = 1
Query: 1 KVLCIFPSRYLFAIGLPPVFSFRWNLPPALSCNPKQLDSPKADRASGVPSTRGAVTLDGVVFQRTWPGAETGRASLDYNSG-----------PARRPDLHVEHFPLRSPLLGESWLVSFPPLSYMLKSSGSSCLIGGATMDVRECVQSFDDSLASAIRKTYRISLCSSSLWEPRHPSLKVV 510
KVL IFPSRYLFAIGL P+FS NLPP C PKQ DSP A R + GA+TL G FQ TW + AS DYNS PA PDL H E + + L +SG++C VQ D S SAI YRISL SSS+ EPR+P +V+
Sbjct: 515 KVLFIFPSRYLFAIGLSPIFSLGRNLPPDWGCIPKQPDSPTAPRGATGSEHNGALTLSGAPFQGTWVRSAAEDASPDYNSNAEGDRFSWWAYPAP-PDLRSHH---------ERYKTHVGRRALNLMASGATC------------VQRLDGSRDSAIHTKYRISLSSSSMQEPRYPLSRVI 673 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6470.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6470.2.1 >prot_P-wetherbeei_contig6470.2.1 ID=prot_P-wetherbeei_contig6470.2.1|Name=mRNA_P-wetherbeei_contig6470.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=170bp KVLCIFPSRYLFAIGLPPVFSFRWNLPPALSCNPKQLDSPKADRASGVPSback to top mRNA from alignment at P-wetherbeei_contig6470:2612..3429- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6470.2.1 ID=mRNA_P-wetherbeei_contig6470.2.1|Name=mRNA_P-wetherbeei_contig6470.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=818bp|location=Sequence derived from alignment at P-wetherbeei_contig6470:2612..3429- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6470:2612..3429- >mRNA_P-wetherbeei_contig6470.2.1 ID=mRNA_P-wetherbeei_contig6470.2.1|Name=mRNA_P-wetherbeei_contig6470.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig6470:2612..3429- (Phaeothamnion wetherbeei SAG_119_79)back to top |