mRNA_P-wetherbeei_contig646.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig646.5.1
Unique NamemRNA_P-wetherbeei_contig646.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig646.5.1 vs. uniprot
Match: UPI000FD6E59F (glycolate oxidase subunit GlcF n=1 Tax=Mesorhizobium sp. Z1-4 TaxID=2448478 RepID=UPI000FD6E59F)

HSP 1 Score: 482 bits (1241), Expect = 1.040e-165
Identity = 244/445 (54.83%), Postives = 308/445 (69.21%), Query Frame = 1
Query:    1 MRTQFSPEQLRAPGMAQSEKILRACVHCGFCNATCPTYLITGDENDGPRGRIYLMREMLQSSAAPDARTVAHIDACLSCLGCATTCPSGVDYMRLVDHARVHIETQYPRPVFDRMFRAALNFVLPHPARFAFAVRLGRLAAPFVNIMP--KRLARMVAMAKQISGMALPPPRPSPRGGGGRLDRGCKTPPPCGEGFGVGGDTRKLRVVLLNGCVQPVLAPEINAATIRLLTRLGVEVVVPESAGCCGALSHHLGKTDAAMQFARANIRAWMACANSGGLDAILITASGCGTQVKDYGHMLRNDTTYTEYAAHISAITQDISEFLSDLDLPEPAHRQNVRVAYHAACSLQHGQKRSGKVESLLQKAGFEVAHPRDAHLCCGAAGSYTLLQPEMSERLAARKAENLLALQPDFIATGNIGCQVQIAGAAQTPTLHWVQLLDMALNGP 1329
            M+T F+ EQL  P +A++E ILR CVHCGFC ATCPTY+  G+E D PRGRIYL+++ML++    D + V HID CLSCL C TTCPSGV+YM LVDHAR HIE  Y RP+FDR+ RA L  VLP+PARF  A++L +L  PF  ++   K L  + AM K ++  ++PP  PS R             P  G+  G        RVVLLNGC QPVL P IN A IRLLTRLG+EVVV E  GCCGAL HH+G+ +AA++ AR N+ AW++ A +GGLDAI+ITASGCGT +KDYGHMLR D  Y E AA +SA+ +D++E+L  LDLPEPA    + VAYH+ACS+QHGQK +   ++LL KAGF V  PR+ HLCCG+AG+Y ++QP++S RL  RK +NL A   + +A GNIGC  QIA  A  PT+H V+LLD A  GP
Sbjct:    1 MQTSFTAEQLADPHIAEAEGILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADEQIVTHIDRCLSCLACMTTCPSGVNYMHLVDHARAHIEKTYRRPLFDRLIRATLATVLPYPARFRAALKLAKLGRPFAGLLETVKPLRPVGAMLK-LAPASVPPASPSSR---------PSVHPAQGKKRG--------RVVLLNGCAQPVLEPSINEAAIRLLTRLGIEVVVAEGEGCCGALVHHMGREEAALENARRNVDAWISAAENGGLDAIVITASGCGTTIKDYGHMLRLDPAYAEKAARVSALARDVTEYLEALDLPEPAAETGLTVAYHSACSMQHGQKITRPPKALLAKAGFNVVEPREGHLCCGSAGTYNIMQPDISARLRDRKVKNLAATGAELVAAGNIGCITQIADRAGIPTVHTVELLDWAWGGP 427          
BLAST of mRNA_P-wetherbeei_contig646.5.1 vs. uniprot
Match: A0A2W4P5W8_9PROT (Glycolate oxidase iron-sulfur subunit n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4P5W8_9PROT)

HSP 1 Score: 476 bits (1226), Expect = 1.590e-163
Identity = 238/442 (53.85%), Postives = 296/442 (66.97%), Query Frame = 1
Query:    1 MRTQFSPEQLRAPGMAQSEKILRACVHCGFCNATCPTYLITGDENDGPRGRIYLMREMLQSSAAPDARTVAHIDACLSCLGCATTCPSGVDYMRLVDHARVHIETQYPRPVFDRMFRAALNFVLPHPARFAFAVRLGRLAAPFVNIMPKRLARMVAMAKQISGMALPPPRPSPRGGGGRLDRGCKTPPPCGEGFGVGGDTRKLRVVLLNGCVQPVLAPEINAATIRLLTRLGVEVVVPESAGCCGALSHHLGKTDAAMQFARANIRAWMACANSGGLDAILITASGCGTQVKDYGHMLRNDTTYTEYAAHISAITQDISEFLSDLDLPEPAHRQNVRVAYHAACSLQHGQKRSGKVESLLQKAGFEVAHPRDAHLCCGAAGSYTLLQPEMSERLAARKAENLLALQPDFIATGNIGCQVQIAGAAQTPTLHWVQLLDMALNG 1326
            M+T FSPEQL  P +A+SEKILR CVHCGFC ATCPTY++ G+E D PRGRIYL+++ML++    D   V HID CLSCL C TTCPSGV YM LVDHAR HIE  + R + DR+ RA L FVLPHP RF  A++L R   PF  +  +   + +A   +++   +PP  P+ R                  G       R+ RV LL GC Q VL P IN ATI LL RLGVEV VPE  GCCGAL HH+G+  AA++ AR N+ AWM  A++ GLDAI+ITASGCGT +KDYG MLR D  Y E AA +SA+ +D++E+L+ LDLPEP +R  + VAYH+ACS+QHGQK S +   LL +AGF V  PR+ HLCCG+AG+Y +LQPE+S RL  RK +N+ A     +ATGNIGC  QIA AA+ P +H VQLLD A  G
Sbjct:    1 MQTNFSPEQLADPHVAESEKILRNCVHCGFCTATCPTYVLLGNELDSPRGRIYLIKDMLEAGRPADREIVTHIDRCLSCLACMTTCPSGVHYMHLVDHARAHIEKTFRRRLPDRLVRALLAFVLPHPGRFRAALKLARFGRPFAGLFERTALKPLAAMLRLAPKTVPPASPASR-----------------PGVHAASGPRRGRVALLTGCAQSVLDPAINEATISLLNRLGVEVAVPEGEGCCGALVHHMGREHAALEAARRNVDAWMRVADNDGLDAIVITASGCGTTIKDYGFMLRLDPAYAEKAARVSALAKDVTEYLAALDLPEPQNRPGLTVAYHSACSMQHGQKISLQPRELLSRAGFNVREPREGHLCCGSAGTYNMLQPEISARLRDRKVKNIEATGAALVATGNIGCITQIASAARMPVVHTVQLLDWAYGG 425          
BLAST of mRNA_P-wetherbeei_contig646.5.1 vs. uniprot
Match: UPI0013D7BE0F (glycolate oxidase subunit GlcF n=2 Tax=Chelativorans TaxID=449972 RepID=UPI0013D7BE0F)

HSP 1 Score: 476 bits (1226), Expect = 2.100e-163
Identity = 244/448 (54.46%), Postives = 297/448 (66.29%), Query Frame = 1
Query:    1 MRTQFSPEQLRAPGMAQSEKILRACVHCGFCNATCPTYLITGDENDGPRGRIYLMREMLQSSAAPDARTVAHIDACLSCLGCATTCPSGVDYMRLVDHARVHIETQYPRPVFDRMFRAALNFVLPHPARFAFAVRLGRLAAPFVNIMP-----KRLARMVAMAKQISGMALPPPRPSPRGGGGRLDRGCKTPPPCGEGFGVGGDTRKLRVVLLNGCVQPVLAPEINAATIRLLTRLGVEVVVPESAGCCGALSHHLGKTDAAMQFARANIRAWMACANSGGLDAILITASGCGTQVKDYGHMLRNDTTYTEYAAHISAITQDISEFLSDLDLPEPAHRQNVRVAYHAACSLQHGQKRSGKVESLLQKAGFEVAHPRDAHLCCGAAGSYTLLQPEMSERLAARKAENLLALQPDFIATGNIGCQVQIAGAAQTPTLHWVQLLDMALNGP 1329
            M+T F+PEQL  P +A SE ILR CVHCGFC ATCPTY+  G+E D PRGRIYL++EML++    D  TV HID CLSCL C TTCPSGV+YM LVDHAR HIE  Y RP+ DR+ RAAL  VLP+P RF  A+RL RL  PF  +M      K +A M+A+A      A   P   P G      RG                    RV LL GC Q VL P INAAT+RLLTRLG+EVV PE  GCCGAL HH+G+ + A+ FAR NI AW      GGLDAILITASGCGT +KDYGHMLR D  Y E AA +SA+ +DI+E+L++LDLPEP  R  + +AYH+ACS+QHGQK + +  +LL +AGF V  PR+ HLCCG+AG+Y +LQPE++ RL  RK  N+ A   + +ATGNIGC  QIA  +  P +H V+L+D A  GP
Sbjct:    1 MQTNFTPEQLAEPQVAHSETILRKCVHCGFCLATCPTYVELGNELDSPRGRIYLIKEMLENGRPADRETVTHIDRCLSCLSCMTTCPSGVNYMHLVDHARAHIEKTYRRPLLDRLTRAALARVLPYPGRFRLALRLARLGRPFAPLMRALPGLKPVAAMLALAPDTMPPAAAAPAALPEG----APRG--------------------RVALLAGCAQSVLDPGINAATVRLLTRLGIEVVAPEGEGCCGALVHHMGREEEALDFARKNIDAWTRAVEEGGLDAILITASGCGTTIKDYGHMLRLDPGYAEKAARVSALAKDITEYLAELDLPEPDIRPGLDIAYHSACSMQHGQKITRQPRALLTRAGFIVREPREGHLCCGSAGTYNILQPEIARRLRDRKVRNIEATGAEAVATGNIGCITQIASGSNLPVVHTVELIDWAYGGP 424          
BLAST of mRNA_P-wetherbeei_contig646.5.1 vs. uniprot
Match: A0A1N6XUV3_9HYPH (Glycolate oxidase iron-sulfur subunit n=1 Tax=Rhizobium sp. RU20A TaxID=1907412 RepID=A0A1N6XUV3_9HYPH)

HSP 1 Score: 476 bits (1225), Expect = 2.500e-163
Identity = 245/444 (55.18%), Postives = 299/444 (67.34%), Query Frame = 1
Query:    1 MRTQFSPEQLRAPGMAQSEKILRACVHCGFCNATCPTYLITGDENDGPRGRIYLMREMLQSSAAPDARTVAHIDACLSCLGCATTCPSGVDYMRLVDHARVHIETQYPRPVFDRMFRAALNFVLPHPARFAFAVRLGRLAAPFVNIMPK-RLARMVAMAKQISGMALPPPRPSPRGGGGRLDRGCKTPPPCGEGFGVGGDTRKLRVVLLNGCVQPVLAPEINAATIRLLTRLGVEVVVPESAGCCGALSHHLGKTDAAMQFARANIRAWMACANSGGLDAILITASGCGTQVKDYGHMLRNDTTYTEYAAHISAITQDISEFLSDLDLPEPAHRQNVRVAYHAACSLQHGQKRSGKVESLLQKAGFEVAHPRDAHLCCGAAGSYTLLQPEMSERLAARKAENLLALQPDFIATGNIGCQVQIAGAAQTPTLHWVQLLDMALNGP 1329
            M+T FSP QL  P +A+SEKILR CVHCGFC ATCPTY+  GDE D PRGRIYL+++ML++    D  TV HID CLSCL C TTCPSGVDYM LVDHARVHIE  Y RP+ DR+ RA L FVLPHPARF  A++   LA PF  +  +  + R +     ++  ++P P  S R G         T P   E  G        RV +L+GC QPVL PEIN AT+RLL RLG+EVV+PE  GCCG+L HH+G+ + A+  AR N+  W      GGLDAILITASGCGT +KDYGHMLR D  Y E AA ISA+ +DI+E+L+ LDLP    R+ + V YH+ACS+QHGQK +   + LL+ AGF V  P + HLCCG+AG+Y +LQ E+S+RL ARK +NL A +PD IATGNIGC  QIA     P LH V+LLD A  GP
Sbjct:    1 MQTNFSPAQLADPHVAESEKILRRCVHCGFCTATCPTYVTLGDELDSPRGRIYLIKDMLENGRPADKETVTHIDRCLSCLSCTTTCPSGVDYMHLVDHARVHIEKTYTRPLPDRLTRALLAFVLPHPARFRLALKAAGLARPFAALFKRFPVTRPLGNMLDLAPASVPAPSDSARAG---------TRPATAEKRG--------RVAILSGCAQPVLKPEINEATLRLLARLGIEVVIPEGEGCCGSLVHHMGREEEALASARRNVDVWTREIERGGLDAILITASGCGTTIKDYGHMLRLDPAYAEKAARISALAKDITEYLATLDLPRQEPRK-LTVTYHSACSMQHGQKITMAPKLLLKAAGFTVRDPAEGHLCCGSAGTYNILQSEISDRLKARKVKNLEATKPDVIATGNIGCITQIATGTAVPILHTVELLDWAYGGP 426          
BLAST of mRNA_P-wetherbeei_contig646.5.1 vs. uniprot
Match: A0A395LFC8_9HYPH (Glycolate oxidase iron-sulfur subunit n=11 Tax=Sinorhizobium/Ensifer group TaxID=227292 RepID=A0A395LFC8_9HYPH)

HSP 1 Score: 476 bits (1224), Expect = 3.090e-163
Identity = 242/442 (54.75%), Postives = 300/442 (67.87%), Query Frame = 1
Query:    1 MRTQFSPEQLRAPGMAQSEKILRACVHCGFCNATCPTYLITGDENDGPRGRIYLMREMLQSSAAPDARTVAHIDACLSCLGCATTCPSGVDYMRLVDHARVHIETQYPRPVFDRMFRAALNFVLPHPARFAFAVRLGRLAAPFVNIMPKRLARMVAMAKQISGMALPPPRPSPRGGGGRLDRGCKTPPPCGEGFGVGGDTRKLRVVLLNGCVQPVLAPEINAATIRLLTRLGVEVVVPESAGCCGALSHHLGKTDAAMQFARANIRAWMACANSGGLDAILITASGCGTQVKDYGHMLRNDTTYTEYAAHISAITQDISEFLSDLDLPEPAHRQNVRVAYHAACSLQHGQKRSGKVESLLQKAGFEVAHPRDAHLCCGAAGSYTLLQPEMSERLAARKAENLLALQPDFIATGNIGCQVQIAGAAQTPTLHWVQLLDMALNG 1326
            M+T F+P QL  P +A+SE ILR CVHCGFC ATCPTY+  GDE D PRGRIYL+++ML++  A D  TV HID CLSCL C TTCPSGVDYM LVDHAR+HIE  Y RP+ DR+ RA L  VLP+P+RF FA++   L  PF  ++ KR+A +      +       P PS            +T  P   G       R  RV LLNGC QPVL PEIN ATIRLLTRLG+EVV+    GCCGAL HH+G+ + A+  AR N+ AW+  A+ GGLDA++ITASGCGT +KDYGHMLR D  Y E AA +SA+ +DI+E+LS LDLP    R  + V YH+ACS+QHGQK +   + LL++AGF V  P + HLCCG+AG+Y +LQPE+SE+L ARK +NL+A +PD IATGNIGC  QIA     P +H V+LLD A  G
Sbjct:    1 MQTNFTPAQLADPHVAESEAILRKCVHCGFCTATCPTYVTLGDELDSPRGRIYLIKDMLENGRAADTETVTHIDRCLSCLACTTTCPSGVDYMHLVDHARIHIEKTYKRPLKDRLARAVLAQVLPYPSRFRFALKAAALGRPFSKVL-KRIAALKTFGVMLDLAPKAVPEPS------------ETAMP---GTHAASGKRVGRVALLNGCAQPVLKPEINEATIRLLTRLGIEVVISAGEGCCGALVHHMGREEQALDAARRNVDAWLKVADEGGLDAVIITASGCGTTIKDYGHMLRLDPAYAEKAARVSAMAKDITEYLSTLDLPAQDPR-GMTVTYHSACSMQHGQKITMAPKQLLKQAGFVVRDPAEGHLCCGSAGTYNILQPEISEKLKARKVKNLVATKPDVIATGNIGCITQIATGTAIPIVHTVELLDWAYGG 425          
BLAST of mRNA_P-wetherbeei_contig646.5.1 vs. uniprot
Match: A0A5B8B7I7_9HYPH (Glycolate oxidase iron-sulfur subunit n=2 Tax=Mesorhizobium TaxID=68287 RepID=A0A5B8B7I7_9HYPH)

HSP 1 Score: 474 bits (1220), Expect = 1.650e-162
Identity = 244/446 (54.71%), Postives = 300/446 (67.26%), Query Frame = 1
Query:    1 MRTQFSPEQLRAPGMAQSEKILRACVHCGFCNATCPTYLITGDENDGPRGRIYLMREMLQSSAAPDARTVAHIDACLSCLGCATTCPSGVDYMRLVDHARVHIETQYPRPVFDRMFRAALNFVLPHPARFAFAVRLGRLAAPFVNIMP----KRLARMVAMAKQISGMALPPPRPSPRGGGGRLDRGCKTPPPCGEGFGVGGDTRKLRVVLLNGCVQPVLAPEINAATIRLLTRLGVEVVVPESAGCCGALSHHLGKTDAAMQFARANIRAWMACANSGGLDAILITASGCGTQVKDYGHMLRNDTTYTEYAAHISAITQDISEFLSDLDLPEPAHRQNVRVAYHAACSLQHGQKRSGKVESLLQKAGFEVAHPRDAHLCCGAAGSYTLLQPEMSERLAARKAENLLALQPDFIATGNIGCQVQIAGAAQTPTLHWVQLLDMALNG 1326
            M+T FSPEQL  P +A+SEKILR CVHCGFC ATCPTY+  G+E D PRGRIYL+++ML++    D   V HID CLSCL C TTCPSGV+YM LVDHAR HIE  Y RP+ DR+ RA L FVLP+PARF  A++L +L  P   +      K LA M+ +A +    A P  RP     G    +G                 R+ RV LL GC Q VL P IN AT+ LLTRLGVEVVVP   GCCGAL HH+GK DAA+  AR N+ AW   A +GGLDAI+ITASGCGT +KDYG MLR D+ Y + AA +SA+ +D++E+L+ LDLPEPA +  + VAYH+ACS+QHGQK + + + LL +AGF V  PR+ HLCCG+AG+Y +LQPE+S RL  RK +N+ A     +ATGNIGC  QIA AA  P +H VQLLD A  G
Sbjct:    1 MQTTFSPEQLADPHVAESEKILRKCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLEAGRPADKEIVTHIDRCLSCLACMTTCPSGVNYMHLVDHARAHIEKTYRRPLPDRLVRALLAFVLPYPARFRAALKLAKLGRPCAGLFEGTALKPLAAMLKLAPKTVPAASPVSRP-----GSHPAKGA----------------RRGRVALLTGCAQSVLDPAINEATVSLLTRLGVEVVVPRGEGCCGALVHHMGKEDAALADARRNVDAWTREAEAGGLDAIVITASGCGTTIKDYGFMLRLDSAYADKAAKVSALAKDVTEYLATLDLPEPAKKPGIAVAYHSACSMQHGQKITRQPKELLARAGFVVKEPREGHLCCGSAGTYNMLQPEISARLRDRKVKNIEATGAALVATGNIGCITQIASAADMPVVHTVQLLDWAYGG 425          
BLAST of mRNA_P-wetherbeei_contig646.5.1 vs. uniprot
Match: UPI001AE948D5 (glycolate oxidase subunit GlcF n=1 Tax=Neorhizobium galegae TaxID=399 RepID=UPI001AE948D5)

HSP 1 Score: 473 bits (1218), Expect = 2.790e-162
Identity = 244/443 (55.08%), Postives = 301/443 (67.95%), Query Frame = 1
Query:    1 MRTQFSPEQLRAPGMAQSEKILRACVHCGFCNATCPTYLITGDENDGPRGRIYLMREMLQSSAAPDARTVAHIDACLSCLGCATTCPSGVDYMRLVDHARVHIETQYPRPVFDRMFRAALNFVLPHPARFAFAVRLGRLAAPFVNIMPKRLARMVAMAKQISGMALPPPRPSPRGGGGRLDRGCKTPPPCGEGFGVGGDTRKLRVVLLNGCVQPVLAPEINAATIRLLTRLGVEVVVPESAGCCGALSHHLGKTDAAMQFARANIRAWMACANSGGLDAILITASGCGTQVKDYGHMLRNDTTYTEYAAHISAITQDISEFLSDLDLPEPAHRQNVRVAYHAACSLQHGQKRSGKVESLLQKAGFEVAHPRDAHLCCGAAGSYTLLQPEMSERLAARKAENLLALQPDFIATGNIGCQVQIAGAAQTPTLHWVQLLDMALNGP 1329
            M+T F+  QL  P +AQSEKILR CVHCGFC ATCPTY+  G+E D PRGRIYL+++ML++    D   V HID CLSCL C TTCPSGVDYM L+DHAR HIE  Y RP+ DR+ R  L  VLPHP RF  A+ L RLA P  ++    L R+ A+    + + L P  P P    G        P P  +         + RV +L GC QPVL P INAAT+RLL+RLGVE+V P+  GCCGAL HH+G+  AA+ FARAN+ AW     +GGLDAILITASGCGT +KDYGHMLR D  Y E AA +SA+ +D++EFL+ LDLP  A  QN+ VAYH+ACS+QHGQK + + + LL+ AGF V  P + HLCCG+AG+Y +LQPE+S +L ARK +N+ A + D IATGNIGC  QIA AA+ P LH V+LLD A  GP
Sbjct:    1 MQTNFTEAQLADPHVAQSEKILRRCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENDRPADREVVTHIDRCLSCLACTTTCPSGVDYMHLIDHARAHIENTYRRPLIDRLIRGVLVAVLPHPQRFRLALALARLARPLASV----LGRVRALKPLAAMLELAPQSPLPAAPAG--------PVPVEQPV-------RGRVAILAGCAQPVLDPGINAATVRLLSRLGVEIVTPKGEGCCGALVHHMGREAAALDFARANVDAWTREIEAGGLDAILITASGCGTTIKDYGHMLRLDPAYAEKAARVSALAKDVTEFLALLDLPRLAP-QNLTVAYHSACSMQHGQKITMQPKLLLKAAGFAVKDPAEGHLCCGSAGTYNILQPEISAQLKARKVKNIEATRADLIATGNIGCITQIATAAKMPILHTVELLDWAYGGP 423          
BLAST of mRNA_P-wetherbeei_contig646.5.1 vs. uniprot
Match: A0A4P6UWF4_9HYPH (Glycolate oxidase iron-sulfur subunit n=1 Tax=Roseitalea porphyridii TaxID=1852022 RepID=A0A4P6UWF4_9HYPH)

HSP 1 Score: 474 bits (1219), Expect = 3.530e-162
Identity = 243/448 (54.24%), Postives = 298/448 (66.52%), Query Frame = 1
Query:    1 MRTQFSPEQLRAPGMAQSEKILRACVHCGFCNATCPTYLITGDENDGPRGRIYLMREMLQSSAAPDARTVAHIDACLSCLGCATTCPSGVDYMRLVDHARVHIETQYPRPVFDRMFRAALNFVLPHPARFAFAVRLGRLAAPFVNIMP-----KRLARMVAMA-KQISGMALPPPRPSPRGGGGRLDRGCKTPPPCGEGFGVGGDTRKLRVVLLNGCVQPVLAPEINAATIRLLTRLGVEVVVPESAGCCGALSHHLGKTDAAMQFARANIRAWMACANSGGLDAILITASGCGTQVKDYGHMLRNDTTYTEYAAHISAITQDISEFLSDLDLPEPAHRQNVRVAYHAACSLQHGQKRSGKVESLLQKAGFEVAHPRDAHLCCGAAGSYTLLQPEMSERLAARKAENLLALQPDFIATGNIGCQVQIAGAAQTPTLHWVQLLDMALNG 1326
            M+T F+ EQL  P  A SEKILR+CVHCGFC ATCPTY+  G+E D PRGRIYL+++ML++    D +TV HID CLSCL C TTCPSGV+YM LVDHAR HIE  Y RP FDR+ R  L FVLPHP RF  A++  RL  PF  +       +R   M+ +A +QI+       RP+               P    G G     R+ RV +L GC QPVL PE NAATIRLLTRLGVEVVVPE  GCCGAL HH+G+ D A++ AR N+ AW A    GGLDAI+ITASGCGT +KDYGHMLR D  Y + AA +SA+  D++E+L+ LDLPEPA   N+ VAYH+ACS+QHGQK +   + LL KAGF V  P + HLCCG+AG+Y ++QPE++  L ARK  N+ A +PD IATGNIGC  QI      P +H V+LL+ A  G
Sbjct:    1 MQTSFTQEQLADPHTAHSEKILRSCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENDRPADEKTVLHIDRCLSCLACMTTCPSGVNYMHLVDHARAHIEKTYRRPFFDRLTRGVLAFVLPHPGRFRAALQAARLGRPFAPLFKAVGPLRRFGAMLDLAPRQIA-------RPT-----------IYAVPAAYPGRG----ERRGRVAILTGCAQPVLRPETNAATIRLLTRLGVEVVVPEGEGCCGALVHHMGREDDALEAARRNVDAWTAQIERGGLDAIVITASGCGTTIKDYGHMLRLDPDYADKAAKVSALAMDVTEYLATLDLPEPAIEPNLTVAYHSACSMQHGQKITRAPKDLLSKAGFAVKDPPEGHLCCGSAGTYNIMQPEIAAELKARKVRNIEATRPDLIATGNIGCITQIGSGTDIPIVHTVELLEWAYGG 426          
BLAST of mRNA_P-wetherbeei_contig646.5.1 vs. uniprot
Match: A0A7W2BSM2_9HYPH (Glycolate oxidase iron-sulfur subunit n=3 Tax=Hyphomicrobiales TaxID=356 RepID=A0A7W2BSM2_9HYPH)

HSP 1 Score: 473 bits (1217), Expect = 3.690e-162
Identity = 244/445 (54.83%), Postives = 301/445 (67.64%), Query Frame = 1
Query:    1 MRTQFSPEQLRAPGMAQSEKILRACVHCGFCNATCPTYLITGDENDGPRGRIYLMREMLQSSAAPDARTVAHIDACLSCLGCATTCPSGVDYMRLVDHARVHIETQYPRPVFDRMFRAALNFVLPHPARFAFAVRLGRLAAPFVNIMPKRLARMVAMAKQISGMA--LPPPRPSPRGGGGRLDRGCKTPPPCGEGFGVGGDTRKLRVVLLNGCVQPVLAPEINAATIRLLTRLGVEVVVPESAGCCGALSHHLGKTDAAMQFARANIRAWMACANSGGLDAILITASGCGTQVKDYGHMLRNDTTYTEYAAHISAITQDISEFLSDLDLPEPAHRQNVRVAYHAACSLQHGQKRSGKVESLLQKAGFEVAHPRDAHLCCGAAGSYTLLQPEMSERLAARKAENLLALQPDFIATGNIGCQVQIAGAAQTPTLHWVQLLDMALNGP 1329
            M+T F+ EQL  P +A+SEKILR CVHCGFC ATCPTY+  G+E D PRGRIYL+++ML++  A DA  V HID CLSCL C TTCPSGVDYM LVDHARVHIE  Y RP  DR+ R  L  VLP+P RF  A+ L RL  P   ++     R VA  K ++ M    P  RP P        RG +     GE        R+ RV +L+GC QPVL P IN ATIRLLTR+GVEVVVP+  GCCGAL HH+GK D A+ FAR+NI  W+    +GGLDAI+ITASGCGT +KDYGHMLR D  Y + AA +SA+ +D++E+LS L+LPE   R  + VAYH+ACS+QHGQK +   + LL+KAGF V  P + HLCCG+AG+Y ++QPE+S +L  RK +N+ A + D IATGNIGC  QI  A   P +H V+LLD A  GP
Sbjct:    1 MQTNFTAEQLANPHVAESEKILRRCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRAADAEVVTHIDRCLSCLACVTTCPSGVDYMHLVDHARVHIEKTYRRPPMDRLIRQVLATVLPYPGRFRLALGLARLGRPLAPLL-----RRVAPLKPLAAMLDLAPQARPKPSTSARPGSRGSE-----GE--------RRGRVAILSGCAQPVLDPGINEATIRLLTRIGVEVVVPQGEGCCGALVHHMGKEDQALAFARSNIDVWIREIEAGGLDAIIITASGCGTTIKDYGHMLRLDPAYADKAARVSALAKDVTEYLSALELPEVESR-GLAVAYHSACSMQHGQKITMAPKVLLRKAGFTVREPAEGHLCCGSAGTYNIMQPEISAQLKTRKVKNIEATRADVIATGNIGCMTQIGTATAIPIVHTVELLDWAYGGP 426          
BLAST of mRNA_P-wetherbeei_contig646.5.1 vs. uniprot
Match: UPI0010BF8C22 (glycolate oxidase subunit GlcF n=1 Tax=Rhizobium sp. FY34 TaxID=2562309 RepID=UPI0010BF8C22)

HSP 1 Score: 472 bits (1215), Expect = 7.160e-162
Identity = 244/443 (55.08%), Postives = 300/443 (67.72%), Query Frame = 1
Query:    1 MRTQFSPEQLRAPGMAQSEKILRACVHCGFCNATCPTYLITGDENDGPRGRIYLMREMLQSSAAPDARTVAHIDACLSCLGCATTCPSGVDYMRLVDHARVHIETQYPRPVFDRMFRAALNFVLPHPARFAFAVRLGRLAAPFVNIMPKRLARMVAMAKQISGMALPPPRPSPRGGGGRLDRGCKTPPPCGEGFGVGGDTRKLRVVLLNGCVQPVLAPEINAATIRLLTRLGVEVVVPESAGCCGALSHHLGKTDAAMQFARANIRAWMACANSGGLDAILITASGCGTQVKDYGHMLRNDTTYTEYAAHISAITQDISEFLSDLDLPEPAHRQNVRVAYHAACSLQHGQKRSGKVESLLQKAGFEVAHPRDAHLCCGAAGSYTLLQPEMSERLAARKAENLLALQPDFIATGNIGCQVQIAGAAQTPTLHWVQLLDMALNGP 1329
            M+T F+PEQL  P +AQSEKILR CVHCGFC ATCPTY+  G+E D PRGRIYL+++ML++    DA+ V HID CLSCL C TTCPSGVDYM LVDHAR HIE  Y RP+ DR+ R  L  VLP+PARF  A+ L RL  PF  +    LAR+  +    + + L P R +P           +  PP           R+ RV +L GC QPVL P INAAT RLL R  VEVV P+  GCCGAL HH+G+ +AA+ FARAN+ AWM    SGGLDAILITASGCGT +KDYGHMLR D TY + AA ISA+ +D++E+L+ LDLP  A +  + VAYH+ACS+QHGQK + + + LL+ AGF V  P + HLCCG+AG+Y +LQPE+S +L ARK +N+ A + D IATGNIGC  QI      P LH V+LLD A  GP
Sbjct:    1 MQTSFTPEQLADPHVAQSEKILRRCVHCGFCTATCPTYVTLGNELDSPRGRIYLIKDMLENGRPADAQVVKHIDRCLSCLACTTTCPSGVDYMHLVDHARSHIENTYRRPLMDRLIRGLLVAVLPYPARFRAALVLARLGRPFSPL----LARVEVLRPLAAMLDLAPKRAAPVAK-------AEAAPPLAPAL------RRGRVAILAGCAQPVLDPGINAATQRLLARFQVEVVQPQGEGCCGALVHHMGREEAALDFARANVDAWMREVESGGLDAILITASGCGTTIKDYGHMLRLDPTYAQKAAQISALARDVTEYLATLDLPRQAPK-GLTVAYHSACSMQHGQKITLQPKQLLKAAGFAVKDPAEGHLCCGSAGTYNILQPEISAQLKARKVKNIEATRADIIATGNIGCMTQIGTGTDIPILHTVELLDWAYGGP 425          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig646.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI000FD6E59F1.040e-16554.83glycolate oxidase subunit GlcF n=1 Tax=Mesorhizobi... [more]
A0A2W4P5W8_9PROT1.590e-16353.85Glycolate oxidase iron-sulfur subunit n=1 Tax=Prot... [more]
UPI0013D7BE0F2.100e-16354.46glycolate oxidase subunit GlcF n=2 Tax=Chelativora... [more]
A0A1N6XUV3_9HYPH2.500e-16355.18Glycolate oxidase iron-sulfur subunit n=1 Tax=Rhiz... [more]
A0A395LFC8_9HYPH3.090e-16354.75Glycolate oxidase iron-sulfur subunit n=11 Tax=Sin... [more]
A0A5B8B7I7_9HYPH1.650e-16254.71Glycolate oxidase iron-sulfur subunit n=2 Tax=Meso... [more]
UPI001AE948D52.790e-16255.08glycolate oxidase subunit GlcF n=1 Tax=Neorhizobiu... [more]
A0A4P6UWF4_9HYPH3.530e-16254.24Glycolate oxidase iron-sulfur subunit n=1 Tax=Rose... [more]
A0A7W2BSM2_9HYPH3.690e-16254.83Glycolate oxidase iron-sulfur subunit n=3 Tax=Hyph... [more]
UPI0010BF8C227.160e-16255.08glycolate oxidase subunit GlcF n=1 Tax=Rhizobium s... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig646contigP-wetherbeei_contig646:4853..6187 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1287276.X752_09740
Preferred nameglcF
PFAMsCCG,Fer4_7
Model size1335
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00042
KEGG koko:K11473
KEGG ReactionR00475
KEGG Pathwayko00630,ko01100,ko01110,ko01120,ko01130,map00630,map01100,map01110,map01120,map01130
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0006066,GO:0006082,GO:0008150,GO:0008152,GO:0009056,GO:0009441,GO:0009987,GO:0016054,GO:0016491,GO:0016614,GO:0017144,GO:0019154,GO:0019752,GO:0032787,GO:0034308,GO:0034310,GO:0042737,GO:0043436,GO:0044237,GO:0044248,GO:0044281,GO:0044282,GO:0046164,GO:0046296,GO:0046395,GO:0055114,GO:0071704,GO:0072329,GO:1901575,GO:1901615,GO:1901616
Exons1
Evalue2.89e-163
EggNOG OGsCOG0247@1|root,COG0247@2|Bacteria,1MWTK@1224|Proteobacteria,2TR9H@28211|Alphaproteobacteria,43I5A@69277|Phyllobacteriaceae
Description4Fe-4S dicluster domain
Cds size1335
COG categoryC
BRITEko00000,ko00001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186915.0449133-CDS-P-wetherbeei_contig646:4852..61871683186915.0449133-CDS-P-wetherbeei_contig646:4852..6187Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig646 4853..6187 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig646.5.1prot_P-wetherbeei_contig646.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig646 4853..6187 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig646.5.1

>prot_P-wetherbeei_contig646.5.1 ID=prot_P-wetherbeei_contig646.5.1|Name=mRNA_P-wetherbeei_contig646.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=445bp
MRTQFSPEQLRAPGMAQSEKILRACVHCGFCNATCPTYLITGDENDGPRG
RIYLMREMLQSSAAPDARTVAHIDACLSCLGCATTCPSGVDYMRLVDHAR
VHIETQYPRPVFDRMFRAALNFVLPHPARFAFAVRLGRLAAPFVNIMPKR
LARMVAMAKQISGMALPPPRPSPRGGGGRLDRGCKTPPPCGEGFGVGGDT
RKLRVVLLNGCVQPVLAPEINAATIRLLTRLGVEVVVPESAGCCGALSHH
LGKTDAAMQFARANIRAWMACANSGGLDAILITASGCGTQVKDYGHMLRN
DTTYTEYAAHISAITQDISEFLSDLDLPEPAHRQNVRVAYHAACSLQHGQ
KRSGKVESLLQKAGFEVAHPRDAHLCCGAAGSYTLLQPEMSERLAARKAE
NLLALQPDFIATGNIGCQVQIAGAAQTPTLHWVQLLDMALNGPD*
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mRNA from alignment at P-wetherbeei_contig646:4853..6187-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig646.5.1 ID=mRNA_P-wetherbeei_contig646.5.1|Name=mRNA_P-wetherbeei_contig646.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1335bp|location=Sequence derived from alignment at P-wetherbeei_contig646:4853..6187- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCACGCAATTCAGCCCTGAACAGTTGCGCGCCCCCGGCATGGCGCA GTCTGAAAAGATTTTGCGCGCCTGTGTGCATTGCGGGTTTTGTAACGCCA CCTGCCCGACATACCTTATAACCGGCGATGAAAATGACGGGCCGCGCGGG CGGATTTATCTGATGCGCGAAATGCTGCAAAGCAGCGCCGCGCCCGATGC GCGCACCGTGGCGCATATTGACGCTTGCCTGTCGTGTCTGGGCTGCGCCA CCACTTGTCCGTCGGGCGTGGATTATATGCGCCTTGTGGATCATGCGCGT GTGCATATTGAGACACAGTACCCGCGGCCAGTTTTTGATCGCATGTTTCG CGCTGCGCTTAATTTTGTGCTGCCGCACCCGGCGCGGTTTGCATTTGCCG TGCGGTTGGGGCGGCTGGCTGCGCCATTTGTGAATATTATGCCTAAGCGG CTGGCGCGGATGGTCGCGATGGCAAAACAGATTTCCGGTATGGCGCTCCC CCCACCCCGGCCCTCCCCACGAGGGGGAGGGGGAAGACTGGATCGCGGGT GTAAAACCCCTCCCCCTTGTGGGGAGGGGTTTGGGGTGGGGGGCGACACG AGGAAACTGCGTGTCGTTCTGCTGAACGGCTGCGTACAGCCGGTGCTGGC GCCGGAAATCAATGCTGCAACCATCCGCCTGCTGACGCGCCTTGGCGTTG AAGTTGTTGTGCCGGAAAGTGCGGGCTGTTGCGGCGCGCTGAGCCACCAT TTGGGGAAAACCGACGCCGCCATGCAGTTTGCCCGCGCCAATATACGGGC CTGGATGGCGTGTGCAAACAGCGGCGGACTTGATGCGATCCTGATCACCG CATCAGGGTGTGGAACACAGGTAAAGGATTACGGGCATATGCTGCGCAAC GACACGACGTACACGGAATATGCGGCGCACATATCCGCCATCACCCAGGA CATCAGCGAATTTCTGTCTGATCTTGATTTGCCGGAACCCGCACACAGGC AGAATGTTCGCGTTGCCTATCACGCCGCCTGTTCGCTGCAACATGGCCAG AAACGCAGTGGCAAGGTTGAAAGCCTGTTACAAAAAGCGGGCTTTGAAGT GGCTCACCCGCGTGATGCGCATCTGTGCTGCGGGGCGGCGGGCAGCTACA CCTTATTGCAGCCGGAAATGAGCGAACGTCTGGCGGCCCGCAAGGCGGAA AATCTGCTGGCGCTACAGCCGGATTTTATCGCCACCGGAAACATCGGCTG TCAGGTGCAGATTGCGGGCGCCGCGCAAACCCCCACCCTGCATTGGGTGC AGTTGCTGGACATGGCGCTGAACGGCCCGGATTAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig646:4853..6187-

>mRNA_P-wetherbeei_contig646.5.1 ID=mRNA_P-wetherbeei_contig646.5.1|Name=mRNA_P-wetherbeei_contig646.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1335bp|location=Sequence derived from alignment at P-wetherbeei_contig646:4853..6187- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCACGCAATTCAGCCCTGAACAGTTGCGCGCCCCCGGCATGGCGCA
GTCTGAAAAGATTTTGCGCGCCTGTGTGCATTGCGGGTTTTGTAACGCCA
CCTGCCCGACATACCTTATAACCGGCGATGAAAATGACGGGCCGCGCGGG
CGGATTTATCTGATGCGCGAAATGCTGCAAAGCAGCGCCGCGCCCGATGC
GCGCACCGTGGCGCATATTGACGCTTGCCTGTCGTGTCTGGGCTGCGCCA
CCACTTGTCCGTCGGGCGTGGATTATATGCGCCTTGTGGATCATGCGCGT
GTGCATATTGAGACACAGTACCCGCGGCCAGTTTTTGATCGCATGTTTCG
CGCTGCGCTTAATTTTGTGCTGCCGCACCCGGCGCGGTTTGCATTTGCCG
TGCGGTTGGGGCGGCTGGCTGCGCCATTTGTGAATATTATGCCTAAGCGG
CTGGCGCGGATGGTCGCGATGGCAAAACAGATTTCCGGTATGGCGCTCCC
CCCACCCCGGCCCTCCCCACGAGGGGGAGGGGGAAGACTGGATCGCGGGT
GTAAAACCCCTCCCCCTTGTGGGGAGGGGTTTGGGGTGGGGGGCGACACG
AGGAAACTGCGTGTCGTTCTGCTGAACGGCTGCGTACAGCCGGTGCTGGC
GCCGGAAATCAATGCTGCAACCATCCGCCTGCTGACGCGCCTTGGCGTTG
AAGTTGTTGTGCCGGAAAGTGCGGGCTGTTGCGGCGCGCTGAGCCACCAT
TTGGGGAAAACCGACGCCGCCATGCAGTTTGCCCGCGCCAATATACGGGC
CTGGATGGCGTGTGCAAACAGCGGCGGACTTGATGCGATCCTGATCACCG
CATCAGGGTGTGGAACACAGGTAAAGGATTACGGGCATATGCTGCGCAAC
GACACGACGTACACGGAATATGCGGCGCACATATCCGCCATCACCCAGGA
CATCAGCGAATTTCTGTCTGATCTTGATTTGCCGGAACCCGCACACAGGC
AGAATGTTCGCGTTGCCTATCACGCCGCCTGTTCGCTGCAACATGGCCAG
AAACGCAGTGGCAAGGTTGAAAGCCTGTTACAAAAAGCGGGCTTTGAAGT
GGCTCACCCGCGTGATGCGCATCTGTGCTGCGGGGCGGCGGGCAGCTACA
CCTTATTGCAGCCGGAAATGAGCGAACGTCTGGCGGCCCGCAAGGCGGAA
AATCTGCTGGCGCTACAGCCGGATTTTATCGCCACCGGAAACATCGGCTG
TCAGGTGCAGATTGCGGGCGCCGCGCAAACCCCCACCCTGCATTGGGTGC
AGTTGCTGGACATGGCGCTGAACGGCCCGGATTAA
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