prot_P-wetherbeei_contig645.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig645.4.1
Unique Nameprot_P-wetherbeei_contig645.4.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length400
Homology
BLAST of mRNA_P-wetherbeei_contig645.4.1 vs. uniprot
Match: A0A6H5JV52_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV52_9PHAE)

HSP 1 Score: 142 bits (357), Expect = 3.290e-33
Identity = 162/452 (35.84%), Postives = 208/452 (46.02%), Query Frame = 0
Query:    1 MNTGNACFRSAILQALLALESFASTVLAARELLNDPIAAA-ALPTWAELCRFAAAFEEPVPASSSIGSXXXXXXXXXAWASVQRTKGKKGGRSGFGA----------SLDAVVAEDALATTFAAFRGQNPGQQEDAHEFFAFLIDRLHEELVTARKAHSTRSSRTVRAIEHNAWGTPSGGGDAGAAAGVGAA-------------DHWQEVGKGGTRAVVNNPP-------------------------------------FQCLQLDLE-PAAPPPSV---PPPGTGRGVPLRVCP-------------AXXXXXXXXXXXXXXXXXXXXXXRGAWNTDGAAGXXXXXPAVGAAGTTAGAPMSATGAGPRGGAGSVHEALAAFFSGEVLDGVKGGHNVEVKALKSVSLDRLPHFLTLHLKQFFFDQLRGPRKLCKPVLFPTTLEIPATLLS 374
            +NTGN+CFR+A+LQALLA E F   +  A   L D I A  ALPTWA+L RFAAAFE P P  ++            AW++        GGR               + + V+ ++A++  F AFR  + G+QEDA EF AF +D+LHEE+V A+K     +S                GGD G +A  G               D W EVGKGG +AVVN P                                      F CLQLDL+ P++P P     P   TG G                    +     XXXXXXXXXXXXXXXXX           XXXXX      GT   AP +        G   +  AL+A F GE + GVKG  N+EVKA ++++L++ P  LTLHLKQF F    GPRKL + V +P  L +P  ++S
Sbjct:  254 INTGNSCFRNAVLQALLACEPFVQVLFRAAPGLRDSIPAKEALPTWAQLARFAAAFEPPKPGDAAPLGSGGSSSAKGAWSTA-------GGRXXXXXXXXXXXXXXXAAEPVLPDEAMSRAFGAFRAASLGEQEDAQEFLAFFLDQLHEEIVDAKKNKPKPASD---------------GGDRGGSADSGTXXXXXXXXXXXXEDDAWLEVGKGGAKAVVNAPDPRKKVSNSSVVTGLFYGMFRSEVKKSGNAKSSVTLEAFHCLQLDLDLPSSPSPRNNIWPETFTGGGXXXXXXXXXAWGSGTGGFDSSNGGGRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGGTVPPAPGA--------GVTVLEAALSALFGGEAVAGVKGKRNLEVKASRTLTLEQAPKVLTLHLKQFSFHPELGPRKLARRVRYPLELTVPTLVMS 675          
BLAST of mRNA_P-wetherbeei_contig645.4.1 vs. uniprot
Match: D7FJX3_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJX3_ECTSI)

HSP 1 Score: 127 bits (320), Expect = 2.490e-28
Identity = 151/430 (35.12%), Postives = 200/430 (46.51%), Query Frame = 0
Query:    1 MNTGNACFRSAILQALLALESFASTVLAARELLNDPIAAA-ALPTWAELCRFAAAFEEPVPASSS---IGSXXXXXXXXXAWASVQRTKGKKGGRSGFGASLDAVVAEDALATTFAAFRGQNPGQQEDAHEFFAFLIDRLHEELVTARKAHSTRSSRTVRAIEHNAWGTPSGGGDAGAAA------------GVGAADH-WQEVGKGGTRAVVNNPP---------FQCLQLDLEPAAPPPSVPPPGTGRGVPLRVCPAXXXXXXXXXXXXXXXXXXXXXXRGAWNTDGAAGXXXXXPAVGAAGTTA------------------------------GAPMSATGAGPRGGAGSVHEALAAFFSGEVLDGVKGGHNVEVKALKSVSLDRLPHFLTLHLKQFFFDQLRGPRKLCKPVLFPTTLEIPATLLS 374
            +NTGN+CFR+A+LQALLA E F   +  A   L D + A  ALPTWA+L RFAAAFE P P +++      XXXXXXXXX                      + V+ ++A++  F AFR  + G+QEDA EF AF +D+LHEE+V A+K +   +S                GG  G +A            G G  D  W EVGKGG +AVVN P          ++  + +++    P S         +P    P           XXXXXXXX     G    D + GXXXXX      G                                 GA   A GAG       +  AL+A F GE + GVKG  N+EVKA ++++L++ P  LTLHLKQF F    GPRKL + V +P  L +P  ++S
Sbjct:  287 INTGNSCFRNAVLQALLACEPFVQVLFRAAPGLRDSVPAREALPTWAQLARFAAAFEPPKPGAAAPLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAEPVLPDEAMSRAFGAFRAASLGEQEDAQEFLAFFLDQLHEEIVDAKKNNPKPASD---------------GGSGGVSADXXXXXXXXXXXGEGEEDDAWLEVGKGGAKAVVNAPDPRKKVTGLFYRMFRSEVKKNGNPQSSVTLELDLDLPSSTSPQNNIWTETVSGXXXXXXXXAWGS-GTGGFDSSNGXXXXXXXXEEGGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAVPPAPGAGVT----VLESALSALFGGEAVAGVKGKRNLEVKASRTLTLEQAPKVLTLHLKQFSFHPELGPRKLARRVRYPLELTVPTLVMS 696          
BLAST of mRNA_P-wetherbeei_contig645.4.1 vs. uniprot
Match: A0A836CGA5_9STRA (USP domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGA5_9STRA)

HSP 1 Score: 105 bits (263), Expect = 3.320e-21
Identity = 114/419 (27.21%), Postives = 149/419 (35.56%), Query Frame = 0
Query:    1 MNTGNACFRSAILQALLALESFASTVLA--ARELLNDPIAAAALPTWAELCRFAAAFEEPVPASSSIGSXXXXXXXXXAWASVQRTKGKKGGRSGFGASLDAVVAEDALATTFAAFRGQNPGQQEDAHEFFAFLIDRLHEELVTARKAHSTRSSRTVRAIEHNAWGTPSGGGDAGAAAGVGAADHWQEVGKGGTRAVVNNP----------------------------------------PFQCLQLDLEPAAPPPSVPPPGTG-RGVPLRVCPAXXXXXXXXXXXXXXXXXXXXXXRGAWNTDGAAGXXXXXPAVGAAGTTAGAPMSATGAGPRGGAGSVHEALAAFFSGEVLDGVKGGHNVEVKALKSVSLDRLPHFLTLHLKQFFFDQLRGPR-KLCKPVLFPTTLEIPATLLSA 375
            +NTGN C+R A+LQ+LLA    A  VLA  AR LL  P AA  +PTW  L +F   F                      W       GK            AV  +D L     +FRG   G+QEDA EF A+ + +LH+E+    K  + + +     ++  A                   D WQEVG+GG  AVVN                                          PF CLQL + P   PP+ PP G   RG P R  P                                                                  +   LAAFF GEVL+GV+GG    V+A +  +L+ LP  LTL LKQ+ F +  G   +  +P+ +P  L IP   L A
Sbjct:  125 VNTGNTCYRLAVLQSLLACAPLAEAVLARPARRLLAAPAAAEHVPTWTALAQFWREF----------------------WGIGAANAGK------------AVNPQDTLRQVLGSFRGAVAGEQEDAEEFLAYFLGKLHDEVERLVKKQA-KDAEQHAVLQQAAVD-----------------DEWQEVGRGGVAAVVNRQAEARAAAVESVITRVFHGTLRSEASHTSQLGRAPLSVMVEPFHCLQLPVPPPDAPPARPPAGGSYRGAPHRPPPL----------------------------------------------------------------QLEAMLAAFFGGEVLEGVRGGGRGVVRAQRQSALESLPRVLTLQLKQYAFHRAHGTALRTGRPIAYPLELRIPDAHLGA 427          
BLAST of mRNA_P-wetherbeei_contig645.4.1 vs. uniprot
Match: A0A4D9D9D9_9STRA (USP domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9D9_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 4.800e-8
Identity = 60/192 (31.25%), Postives = 80/192 (41.67%), Query Frame = 0
Query:    1 MNTGNACFRSAILQALLALESFASTVLAARELL---NDPIAA----------AALPTWAELCRFAAAFEEPVPASSSIGSXXXXXXXXXAWASVQRTKGKK----------------------GGRSGFGAS--------------LDAVVAEDALATTFAAFRGQNPGQQEDAHEFFAFLIDRLHEELVTA 143
            +N GN CF++ +LQALLA E     +LA R L+   + P +           A +PTW ++ + A A E+P   ++S  S           A   R  GKK                      G  +GF                 L  +  +D L   F AFR    G+QEDA EF AFL+DRLHEE V A
Sbjct:  230 VNAGNTCFQNLVLQALLASEPLHRLLLALRPLVLASSSPASPSLSLLARRCQALVPTWMDMAKVAVALEDPSLVAASTASPALVMYKKKDSAVAGRKSGKKHLVGTGSSSSSSSFPPLPSHPSGVANGFKLHGPLEARSPSPRDFYLAPLRPDDYLEEAFRAFRSSEAGEQEDAQEFLAFLLDRLHEEAVGA 421          
BLAST of mRNA_P-wetherbeei_contig645.4.1 vs. uniprot
Match: W7TN80_9STRA (USP domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TN80_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 6.200e-8
Identity = 59/191 (30.89%), Postives = 79/191 (41.36%), Query Frame = 0
Query:    1 MNTGNACFRSAILQALLALESFASTVLAARELL---NDPIAA----------AALPTWAELCRFAAAFEEPVPASSSIGSXXXXXXXXXAWASVQRTKGKK---------------------GGRSGFGAS--------------LDAVVAEDALATTFAAFRGQNPGQQEDAHEFFAFLIDRLHEELVTA 143
            +N GN CF++ +LQALLA E     +L  R L+   + P +           A +PTW ++ + A A E+P   ++S  S           A   R  GKK                     G  +GF                 L  +  +D L   F AFR    G+QEDA EF AFL+DRLHEE V A
Sbjct:  137 VNAGNTCFQNLVLQALLASEPLHRLLLVLRPLVLASSSPASRSLSLLARRCQALVPTWMDMAKVAVALEDPSLVAASTASPALVMYKKKDSAVAGRKSGKKHLVGTGSSSSSSFPPLPSHPSGVANGFKLRGPLEARSPSPRDFYLAPLRPDDYLEEAFRAFRSSEAGEQEDAQEFLAFLLDRLHEEAVGA 327          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig645.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A6H5JV52_9PHAE3.290e-3335.84USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7FJX3_ECTSI2.490e-2835.12USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A836CGA5_9STRA3.320e-2127.21USP domain-containing protein n=1 Tax=Tribonema mi... [more]
A0A4D9D9D9_9STRA4.800e-831.25USP domain-containing protein n=1 Tax=Nannochlorop... [more]
W7TN80_9STRA6.200e-830.89USP domain-containing protein n=1 Tax=Nannochlorop... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 2..371
e-value: 2.0E-15
score: 57.1
NoneNo IPR availableGENE3D3.90.70.10Cysteine proteinasescoord: 284..385
e-value: 4.1E-11
score: 44.6
coord: 1..207
e-value: 1.9E-13
score: 52.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 248..278
NoneNo IPR availablePANTHERPTHR24006UBIQUITIN CARBOXYL-TERMINAL HYDROLASEcoord: 2..369
NoneNo IPR availableCDDcd02257Peptidase_C19coord: 298..368
e-value: 1.58596E-11
score: 62.1154
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 1..399
score: 12.908703
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 2..375

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig645contigP-wetherbeei_contig645:6990..8834 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig645.4.1mRNA_P-wetherbeei_contig645.4.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig645 6972..9141 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig645.4.1 ID=prot_P-wetherbeei_contig645.4.1|Name=mRNA_P-wetherbeei_contig645.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=400bp
MNTGNACFRSAILQALLALESFASTVLAARELLNDPIAAAALPTWAELCR
FAAAFEEPVPASSSIGSSGGGGGGGGAWASVQRTKGKKGGRSGFGASLDA
VVAEDALATTFAAFRGQNPGQQEDAHEFFAFLIDRLHEELVTARKAHSTR
SSRTVRAIEHNAWGTPSGGGDAGAAAGVGAADHWQEVGKGGTRAVVNNPP
FQCLQLDLEPAAPPPSVPPPGTGRGVPLRVCPAPAMVGAAAAALGPGRGR
GRAQGRGAWNTDGAAGAGRGRPAVGAAGTTAGAPMSATGAGPRGGAGSVH
EALAAFFSGEVLDGVKGGHNVEVKALKSVSLDRLPHFLTLHLKQFFFDQL
RGPRKLCKPVLFPTTLEIPATLLSAVSLVPSYSALFSIFRLALLFRIII*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf