mRNA_P-wetherbeei_contig6447.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6447.1.3 vs. uniprot
Match: D7G2R4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G2R4_ECTSI) HSP 1 Score: 214 bits (546), Expect = 1.840e-59 Identity = 107/176 (60.80%), Postives = 130/176 (73.86%), Query Frame = 1
Query: 676 GELRLAKA-AALGGLVAWCLPYLCQASAYRRDPRLGCQLSPADKRRGVGDMLVWTSFIYIVPAVYGVHAHQYGIAVLQAATSVGSTLFHLTRETMCFNLDNIFAQSLLLTTLWGLCMAAWHGVWAYVGLVASGLPLAAYFLVGCGMPGLICCHPAGRCHGVVRRSNPDYDFFHMCW 1200
G + LA+ A +G LVA CLP+L ++S YRRD LGC L DKRR + DMLVWTSF+Y +P+VYG++AHQYGIA LQ T++GSTLFHLTRET FNLDN+FA SLL TT W L + HGVW YV ++ G P A + +V CGMPGL+C HPAG G+ RRSNP+YDFFHM W
Sbjct: 143 GSMTLARVFATIGSLVA-CLPHLLRSSKYRRDRGLGCLLETGDKRRPLTDMLVWTSFVYCLPSVYGLYAHQYGIAGLQLMTTIGSTLFHLTRETKFFNLDNVFATSLLSTTAWSLYLGVTHGVWWYVVVIGLGGPFAIFCIVRCGMPGLVCRHPAGS--GLCRRSNPEYDFFHMLW 315
BLAST of mRNA_P-wetherbeei_contig6447.1.3 vs. uniprot
Match: A0A835Z7G3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7G3_9STRA) HSP 1 Score: 193 bits (490), Expect = 4.080e-51 Identity = 99/168 (58.93%), Postives = 119/168 (70.83%), Query Frame = 1
Query: 700 AALGGLVAWCLPYLCQASAYRRDPRLGCQLSPADKRRGVGDMLVWTSFIYIVPAVYGVHAHQYGIAVLQAATSVGSTLFHLTRETMCFNLDNIFAQSLLLTTLWGLCMAAWHGVWAYVGLVASGLPLAAYFLVGCGMPGLICCHPAGRCHGVVRR-SNPDYDFFHMCW 1200
AAL GL PYL ++S YRRDPRL C+L D RR + D LVWTS +Y VPA+YGV AHQYG+A LQAAT+VGSTLFH RET FNLDN+ A +LL TT W L +AA VWA+ +V +G PLA YF+V CGMPG++C P+G G +RR SNP YD +HM W
Sbjct: 186 AALLGLGCALSPYLLRSSRYRRDPRLRCRLGRRDVRRRLRDPLVWTSLVYAVPALYGVAAHQYGVAALQAATTVGSTLFHRARETRYFNLDNVGALALLFTTAWSLALAARARVWAHAAVVLAGTPLAGYFMVACGMPGVVCACPSGD--GTLRRASNPLYDHYHMLW 351
BLAST of mRNA_P-wetherbeei_contig6447.1.3 vs. uniprot
Match: A0A7S2XVH3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XVH3_9STRA) HSP 1 Score: 132 bits (332), Expect = 1.610e-30 Identity = 81/196 (41.33%), Postives = 112/196 (57.14%), Query Frame = 1
Query: 619 GMVAFLSCALAASLALRAAGELRLAKAAALGGLVAWCLPYLCQASAYRRDPRLGCQLSPADKRRGVGDMLVWTSFIYIVPAVYGVHAHQYGIAVLQAATSVGSTLFHLTRETMCFNLDNIFAQSLLLTTLWGLCMAAWHGVWAYVGLVASGLPLAAYFLVGCGMPGLICCHPAGRCHGVVRRSNPDYDFFHMCWCV 1206
G+V F+S A +++ L ++ A+ L ++ +PYL +AS R DP G +LSP +KRR D LV+TS Y+ +Y QYGIA+LQ TS+GSTL+HLTRETM FN DNI A SLLL T +GL ++ + + L A+G+PL L CGMPG +C G+ R +Y +H W V
Sbjct: 59 GLVIFVSVAFLSTVVLDWLSQVLFARLVTLFSILFMGIPYLAKASPLRSDPSRGIKLSPKEKRRSFADPLVFTSLFYMFAGIYAFSVGQYGIALLQIYTSMGSTLYHLTRETMFFNCDNIGATSLLLLTAYGLYLSLGIDL-GWTILAAAGIPLGGAILHKCGMPGEVC---KGK-----RTCCSEYPSWHSAWHV 245
BLAST of mRNA_P-wetherbeei_contig6447.1.3 vs. uniprot
Match: A0A7S3XR67_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XR67_HETAK) HSP 1 Score: 103 bits (258), Expect = 5.180e-21 Identity = 62/163 (38.04%), Postives = 92/163 (56.44%), Query Frame = 1
Query: 631 FLSCALAASLALRAAGELRLAKAAALGGLVAWCLPYLCQASAYRRDPRLGCQLSPADKRRGVGDMLVWTSFIYIVPAVYGVHAHQYGIAVLQAATSVGSTLFHLTRETMCFNLDNIFAQSLLLTTLWGLCMAAWHG-VWAYVGLVASGLPLAAYFLVGCGMPG 1116
FL AL + L LA+ A+ ++ + LPYL + S RRD +G L+ D R + D LV+TS +Y +P +Y ++ + + +L TS GST+FHLTRETM FN DNI A +L+L +G ++ +W + +GLP+ A+ L CGMPG
Sbjct: 71 FLGSALTVATILDLVEYAPLAELTAMCAVLLYILPYLLKPSILRRDKSIGVNLTEEDLWRPISDPLVYTSLLYALPGLYALYYNMPFLGILHLYTSFGSTMFHLTRETMFFNWDNIGAMALMLIACFGFYLSLGTDMIWTAAAI--TGLPIGAFLLAYCGMPG 231
BLAST of mRNA_P-wetherbeei_contig6447.1.3 vs. uniprot
Match: A0A7S1XWR7_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XWR7_9STRA) HSP 1 Score: 100 bits (249), Expect = 5.730e-20 Identity = 66/180 (36.67%), Postives = 98/180 (54.44%), Query Frame = 1
Query: 676 GELRLAKAAALGGLVAWCLPYLCQASAYRRDP----RLGCQLSPADKRRGVGDMLVWTSFI-YIVPAVYGVHAHQYGIAVLQAATSVGSTLFHLTRETMCFNLDNIFAQSLLLTTLWGLCMAAWHGVWAYVGLVASGLPLAAYFLVGCGMPGLICCHPAGRCHGVVRRSNPDYDFFHMCW 1200
G +R A+ AA + LPYL +AS YR DP + C L P D R VGD+ VW+S++ + PA+Y + Q+ + LQ ++ S L+HL+RET+ FN+DN+F SL T + +A GV YV + LP+A + LV C PG++ + R ++ YDF+H W
Sbjct: 18 GLVRTARVAAGATALLPLLPYLGRASVYREDPGGRGQGFCLLRPEDCWRSVGDVQVWSSWVCFGGPALYSFLSAQWSLGALQLGAAITSGLYHLSRETLFFNVDNVFGLSLGCTVFVAVKLAWDRGVMWYVIVNVLVLPVAGFLLVYCDFPGVV----VRQGEKARRLAHERYDFWHAVW 193
BLAST of mRNA_P-wetherbeei_contig6447.1.3 vs. uniprot
Match: A0A7S3HNL6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HNL6_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 4.260e-12 Identity = 58/168 (34.52%), Postives = 83/168 (49.40%), Query Frame = 1
Query: 733 PYLCQASAYRRDPRLGCQLSPADKRRGVGDMLVWTSFIYIVPAVYGVHAHQYGIAVLQAATSVGSTLFHLTRETMCFNLDNIFAQSLLLTTLWGLCMAAW-HGVWAYVGLVASGLPLAAYFLVGCGMPG-----------LICCHPAGRCHGVVRRSNPDYDFFHMCW 1200
PYL + S +RR + D R D L+ TS Y++ AV+ Q+ IA++ T +GS+L+H RE FNLDNIFA SLL T ++ L + + H ++ +GL+ GLP A + +V CGMP ++CC VR YD H W
Sbjct: 77 PYLRKPSKHRRS-----FVGSVD--RNWNDQLMTTSSSYLLSAVFAFSYGQFEIALICFITYIGSSLYHRHREMEFFNLDNIFATSLLFTCVYTLVSSYFTHEIYFIIGLM--GLPTAMFLIVYCGMPADIRFKDIPGLEVVCC---------VRTGRELYDTVHALW 226 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6447.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 6
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6447.1.3 >prot_P-wetherbeei_contig6447.1.3 ID=prot_P-wetherbeei_contig6447.1.3|Name=mRNA_P-wetherbeei_contig6447.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=556bp MLTQAPAGGCIAPALQCAGGAGSCCGVPLWAVAACAVFLLSTTIIAIDYAback to top mRNA from alignment at P-wetherbeei_contig6447:487..3290+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6447.1.3 ID=mRNA_P-wetherbeei_contig6447.1.3|Name=mRNA_P-wetherbeei_contig6447.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2804bp|location=Sequence derived from alignment at P-wetherbeei_contig6447:487..3290+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6447:487..3290+ >mRNA_P-wetherbeei_contig6447.1.3 ID=mRNA_P-wetherbeei_contig6447.1.3|Name=mRNA_P-wetherbeei_contig6447.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1668bp|location=Sequence derived from alignment at P-wetherbeei_contig6447:487..3290+ (Phaeothamnion wetherbeei SAG_119_79)back to top |