prot_P-wetherbeei_contig6444.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6444.1.2
Unique Nameprot_P-wetherbeei_contig6444.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length196
Homology
BLAST of mRNA_P-wetherbeei_contig6444.1.2 vs. uniprot
Match: A0A6H5JAN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAN6_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 9.790e-31
Identity = 80/189 (42.33%), Postives = 108/189 (57.14%), Query Frame = 0
Query:    1 PHAFRELVHALFRFDWSGREPQGKIVRAYVSLVVHLVSVNGTYLLPAMHMLVRNMVARPAELTARLAVALLNPRSPTFHIAKPEIPFVPPRPPSFLSGSAEARAGVAARQAELHRTLRRLLALAPAGCSQLYPVLADHYPHQRLPAEALADYAAQALTVTRYVPLLQDRVLSLVIQRCLELDVEIKITD 189
            P  F+ELV ALFRFDW G +   KIV+++  L+ HLVS N T ++PAMHMLVRN+V  P +L     V                        P+ L+           RQ  +H  L+  L L P+G S+L+ VL  +YPH+RL AE L+DYA  AL V +Y PL+++ VL L+I++ LE+DVEIKI D
Sbjct:   87 PDEFKELVDALFRFDWRGSD---KIVQSFSGLLQHLVSANSTCMVPAMHMLVRNLVLTPRDLDCEGNVD-----------------------PAALT-----------RQHNVHAALQASLTLVPSGRSKLFGVLKQNYPHRRLRAEVLSDYALHALRVVQYAPLIEESVLRLIIEKGLEIDVEIKIMD 238          
BLAST of mRNA_P-wetherbeei_contig6444.1.2 vs. uniprot
Match: D7FL61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL61_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 1.750e-30
Identity = 80/189 (42.33%), Postives = 108/189 (57.14%), Query Frame = 0
Query:    1 PHAFRELVHALFRFDWSGREPQGKIVRAYVSLVVHLVSVNGTYLLPAMHMLVRNMVARPAELTARLAVALLNPRSPTFHIAKPEIPFVPPRPPSFLSGSAEARAGVAARQAELHRTLRRLLALAPAGCSQLYPVLADHYPHQRLPAEALADYAAQALTVTRYVPLLQDRVLSLVIQRCLELDVEIKITD 189
            P  F+ELV ALFRFDW G +   KIV+++  L+ HLVS N T ++PAMHMLVRN+V  P +L     V                        P+ L+           RQ  +H  L+  L L P+G S+L+ VL  +YPH+RL AE L+DYA  AL V +Y PL+++ VL L+I++ LE+DVEIKI D
Sbjct:   44 PDEFKELVDALFRFDWRGSD---KIVQSFSGLLQHLVSANSTCMVPAMHMLVRNLVLTPRDLDCEGNVD-----------------------PAALT-----------RQHNVHAALQASLTLVPSGRSKLFGVLKQNYPHRRLRAEVLSDYALHALRVVQYAPLIEESVLRLIIEKGLEIDVEIKIMD 195          
BLAST of mRNA_P-wetherbeei_contig6444.1.2 vs. uniprot
Match: H3GYT5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GYT5_PHYRM)

HSP 1 Score: 99.4 bits (246), Expect = 9.780e-21
Identity = 77/207 (37.20%), Postives = 109/207 (52.66%), Query Frame = 0
Query:    1 PHAFRELVHALFRFDW-SGREPQGKIVRAYVSLVVHLVSVNGTYLLPAMHMLVRNM-----VARPAELTARL------------AVALLNPRSPTFHIAKPEIPFVPPRPPSFLSGSAEARAGVAARQAELHRTLRRLLALAPAGCSQLYPVLADHYPHQRLPAEALADYAAQALTVTRYVPLLQDRVLSLVIQRCLELDVEIKITD 189
            P A+R L+  LF+FD  +  +P    V  Y S VVHLVS N  Y++P +HMLVRN+        P +L A++            A+A+    S    +A    P V P+ PS L    +AR   A      H TL R+LAL P   + L+P+L +H+PH+R+ A     Y    L VT YV  L++RVL LVI + + +DVEIK+ +
Sbjct:   80 PRAYRALLDVLFKFDMLASGDPLE--VDDYTSFVVHLVSSNTVYVVPTLHMLVRNLRRPQTKELPPDLKAQIQEQETLKPVKTGAIAIGG--SFGADVAAVPTPLVEPKAPS-LDERIQARFEAA------HATLERVLALVPTATNVLFPILCEHFPHKRMDAPTQVAYLRNVLRVTGYVSGLRERVLGLVIDQLVAIDVEIKLDE 275          
BLAST of mRNA_P-wetherbeei_contig6444.1.2 vs. uniprot
Match: A0A3R7JLG2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JLG2_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 1.020e-20
Identity = 70/205 (34.15%), Postives = 103/205 (50.24%), Query Frame = 0
Query:    1 PHAFRELVHALFRFDWSGREPQGKIVRAYVSLVVHLVSVNGTYLLPAMHMLVRNMVAR-----PAELTARLAVALLNPRSPTFH-----------IAKPEIPFVPPRPPSFLSGSAEARAGVAARQAELHRTLRRLLALAPAGCSQLYPVLADHYPHQRLPAEALADYAAQALTVTRYVPLLQDRVLSLVIQRCLELDVEIKITD 189
            P A+R L+  LF+FD      +   V  Y+S VVHLVS N  Y++P +HMLVRN+        P +L + L      P+  T             +A+   P V       ++        +  R   +H TL R+LAL P   + L+PVL +H+PH+RL A+    Y    L VT Y+  L++RVL LVI + + +DVEIK+ +
Sbjct:   80 PRAYRALLDVLFKFDLINDYQE---VEDYISFVVHLVSSNTVYVVPTLHMLVRNLCRPQPHQLPPDLRSLLEEESEEPKKKTIAGGITIGGSFGAVAEVTTPVV-----ESVNKGPNLEERIQKRFEAVHETLGRVLALVPTAANFLFPVLCEHFPHKRLDADTQVAYLRNVLRVTSYMSGLRERVLGLVIDQLVAIDVEIKLDE 276          
BLAST of mRNA_P-wetherbeei_contig6444.1.2 vs. uniprot
Match: M4BYS9_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BYS9_HYAAE)

HSP 1 Score: 98.2 bits (243), Expect = 2.520e-20
Identity = 75/206 (36.41%), Postives = 99/206 (48.06%), Query Frame = 0
Query:    1 PHAFRELVHALFRFDWSGREPQGKIVRAYVSLVVHLVSVNGTYLLPAMHMLVRNMVARPA--ELTARLAVALLNPRSPTFHIAKPEI---------------PFVPPRPPSFLSGSAEARAGVAARQAELHRTLRRLLALAPAGCSQLYPVLADHYPHQRLPAEALADYAAQALTVTRYVPLLQDRVLSLVIQRCLELDVEIKITD 189
            P A+R L+  LF+FD  G     + V  Y + +VHLVS N  Y++P +HMLVRNM  RP   ELT  L       +       K  +               P      P     S   R  + AR    H  L R+L LAP   + L+PVL +H+PH+RL A     Y    L VT YV  L++RVL LVI + + +DVEIK+ D
Sbjct:    5 PRAYRVLLDVLFKFDLLGSGDMHE-VEDYTTFIVHLVSSNTVYVVPTLHMLVRNM-RRPQGKELTPELQALAQKEQRNQLEAKKIAVAGGIAMKGSVGDMTTPVTVCAAPESKCLSVNER--IQARFETAHHLLERVLKLAPTASNVLFPVLCEHFPHKRLDASTQVAYLRNMLRVTEYVSGLRERVLGLVIDQLVAIDVEIKLDD 206          
BLAST of mRNA_P-wetherbeei_contig6444.1.2 vs. uniprot
Match: W4H914_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H914_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 3.390e-20
Identity = 65/188 (34.57%), Postives = 102/188 (54.26%), Query Frame = 0
Query:    3 AFRELVHALFRFDWSGREPQGKIVRAYVSLVVHLVSVNGTYLLPAMHMLVRNM--VARPAELTAR-LAVALLNPRSPTFHIAKPEIPFVPPRPPSFLSGSAEARAGVAARQAELHRTLRRLLALAPAGCSQLYPVLADHYPHQRLPAEALADYAAQALTVTRYVPLLQDRVLSLVIQRCLELDVEIKI 187
            A+ ELVH ++ FD+    P   I+ AY+ L+ HLV+ + ++L P +HMLVRN+  V RPA L+   LAV + +  +    I  P +       PS    +A+  A +  R A +H    ++L L PA    ++  L ++YPH+RL       Y      +T Y   LQ+RVL LV+++ + +DVEIK+
Sbjct:   85 AYHELVHRIYTFDFLTTMP---IIDAYIRLITHLVTAHTSFLQPTIHMLVRNLLRVPRPAPLSVSPLAVQIKSTLTRRVSIGIPTVN----SGPSEAELAAQFEASLQQRFASVHAAFEKVLHLVPASIHHVFQCLCEYYPHKRLETPIQLSYLTNLFQLTTYAKGLQERVLGLVVEKLVAIDVEIKL 265          
BLAST of mRNA_P-wetherbeei_contig6444.1.2 vs. uniprot
Match: A0A6G0XP88_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XP88_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 8.320e-20
Identity = 64/191 (33.51%), Postives = 101/191 (52.88%), Query Frame = 0
Query:    3 AFRELVHALFRFDWSGREPQGKIVRAYVSLVVHLVSVNGTYLLPAMHMLVRNM--VARPAELTA----RLAVALLNPRSPTFHIAKPEIPFVPPRPPSFLSGSAEARAGVAARQAELHRTLRRLLALAPAGCSQLYPVLADHYPHQRLPAEALADYAAQALTVTRYVPLLQDRVLSLVIQRCLELDVEIKI 187
            A+ EL+H ++ FD+   +P   I+ AY+ L+ H V+ + T+L P +HMLVRN   VARP +  A     +A + LN R     ++ P +P V     S     AE    +  R A +H    ++L L P     ++P L DH+PH+R+       Y      +T Y   LQ+RV+ LV+++ + +DVEIK+
Sbjct:   72 AYYELIHRIYTFDFMTSQP---IIDAYIRLITHFVTAHTTFLQPTIHMLVRNFLRVARPQKAAAPAPPSIASSTLNRR-----MSIPAVPAV-----SEAQLEAEFEESLQRRFASVHVAFAKVLDLVPTSIHHVFPCLCDHFPHKRIETPFQLSYLNNLFKLTTYAKGLQERVVGLVVEKLVSIDVEIKL 249          
BLAST of mRNA_P-wetherbeei_contig6444.1.2 vs. uniprot
Match: A0A484EDU3_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDU3_BRELC)

HSP 1 Score: 96.7 bits (239), Expect = 8.780e-20
Identity = 66/200 (33.00%), Postives = 105/200 (52.50%), Query Frame = 0
Query:    1 PHAFRELVHALFRFDWSGREPQGKIVRA--YVSLVVHLVSVNGTYLLPAMHMLVRNM-VARPAELTARL--------AVALLNPRSPTFHIAKPEIPFVPPRPPSFLSGSAEARAGVAARQAELHRTLRRLLALAPAGCSQLYPVLADHYPHQRLPAEALADYAAQALTVTRYVPLLQDRVLSLVIQRCLELDVEIKITD 189
            P A+R L+  LF+FD       G +  A  Y + ++HLVS N TY+ P +HML RNM +++  EL   L        A+  L+  + +  +    I    P  P  ++     +  + AR A  H+ L R++ L P   + L+P+L +H+PH+R+ A     Y    L +T YV  L++RVL LVI + + +DVEIK+ +
Sbjct:   77 PQAYRVLLDVLFKFDLLA---SGDVSEAEDYATFIIHLVSSNTTYVWPTLHMLARNMGISQEKELPPDLRALGKTEDALKNLSYSTASGSLGSNSIE---PGTPVLVTKEPSLQECILARYAAAHQMLERIITLVPTASNVLFPILCEHFPHKRMDAPTQVAYLRNVLRITEYVGGLRERVLGLVIDQLVAIDVEIKLDE 270          
BLAST of mRNA_P-wetherbeei_contig6444.1.2 vs. uniprot
Match: A0A662XUA0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XUA0_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 2.250e-19
Identity = 70/200 (35.00%), Postives = 100/200 (50.00%), Query Frame = 0
Query:    1 PHAFRELVHALFRFDW-SGREPQGKIVRAYVSLVVHLVSVNGTYLLPAMHMLVRNMVARPA--ELTARLAVALLNPRSPTFHIAKPEI--------PFVPPRPPSFLSGSAEARAGVAARQAELHRTLRRLLALAPAGCSQLYPVLADHYPHQRLPAEALADYAAQALTVTRYVPLLQDRVLSLVIQRCLELDVEIKITD 189
            P A+R L+  LF+FD  +G +P     + Y   VVHLVS N  Y++P +HMLVRN+  RP   +L   L        +    + KP              P P      +      +  R    H TL R+LAL P   + L+PVL +H+PH+R+ A     Y    L VT YV  L++RVL+LVI + + +DVEIK+ +
Sbjct:  159 PRAYRALLDVLFKFDLLAGDDPLE--AQDYARFVVHLVSSNTVYVIPTLHMLVRNL-CRPQLHQLPPALQTQARAEAAAEAELKKPSNGVTIAIGGSMASPVPTEEKKKAPSLDERIQMRFDAAHATLERVLALVPTAANVLFPVLCEHFPHKRMDAATQVAYLRNVLRVTTYVSGLRERVLALVIDQLVAIDVEIKLDE 355          
BLAST of mRNA_P-wetherbeei_contig6444.1.2 vs. uniprot
Match: A0A024UUA9_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUA9_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 7.360e-19
Identity = 65/193 (33.68%), Postives = 100/193 (51.81%), Query Frame = 0
Query:    3 AFRELVHALFRFDWSGREPQGKIVRAYVSLVVHLVSVNGTYLLPAMHMLVRNM--VARPAELTAR-LAVALLNPRS-----PTFHIAKPEIPFVPPRPPSFLSGSAEARAGVAARQAELHRTLRRLLALAPAGCSQLYPVLADHYPHQRLPAEALADYAAQALTVTRYVPLLQDRVLSLVIQRCLELDVEIKI 187
            A+ ELVH ++ FD+    P   ++ AY+ L+ HLV+ + ++L P +HMLVRN+  V RPA ++   LAV + +  S     P  H             PS    +AE    +  R A +H    ++L L PA    ++  L D+YPH+RL       Y      +T Y   LQ+RVL LV+++ + +DVEIK+
Sbjct:   89 AYHELVHRIYTFDFLTTMP---VIEAYIRLITHLVTAHTSFLQPTIHMLVRNLQRVPRPAPVSVSPLAVQIKSTLSRRVSIPAIHAG-----------PSEADLNAEFEVVLQQRFAAVHVAFEKVLQLVPASIHHVFHCLCDYYPHKRLETPIQLSYLNNLFQLTTYAKGLQERVLGLVVEKLVAIDVEIKL 267          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6444.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAN6_9PHAE9.790e-3142.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL61_ECTSI1.750e-3042.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
H3GYT5_PHYRM9.780e-2137.20Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A3R7JLG2_9STRA1.020e-2034.15Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
M4BYS9_HYAAE2.520e-2036.41Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
W4H914_9STRA3.390e-2034.57Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]
A0A6G0XP88_9STRA8.320e-2033.51Uncharacterized protein n=2 Tax=Aphanomyces euteic... [more]
A0A484EDU3_BRELC8.780e-2033.00Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A662XUA0_9STRA2.250e-1935.00Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A024UUA9_9STRA7.360e-1933.68Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007991RNA polymerase I specific transcription initiation factor RRN3PFAMPF05327RRN3coord: 4..187
e-value: 2.8E-25
score: 88.9
IPR007991RNA polymerase I specific transcription initiation factor RRN3PANTHERPTHR12790TRANSCRIPTION INITIATION FACTOR IA RRN3coord: 3..191
NoneNo IPR availablePANTHERPTHR12790:SF0RNA POLYMERASE I-SPECIFIC TRANSCRIPTION INITIATION FACTOR RRN3-RELATEDcoord: 3..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6444contigP-wetherbeei_contig6444:155..1175 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6444.1.2mRNA_P-wetherbeei_contig6444.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6444 155..1175 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6444.1.2 ID=prot_P-wetherbeei_contig6444.1.2|Name=mRNA_P-wetherbeei_contig6444.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=196bp
PHAFRELVHALFRFDWSGREPQGKIVRAYVSLVVHLVSVNGTYLLPAMHM
LVRNMVARPAELTARLAVALLNPRSPTFHIAKPEIPFVPPRPPSFLSGSA
EARAGVAARQAELHRTLRRLLALAPAGCSQLYPVLADHYPHQRLPAEALA
DYAAQALTVTRYVPLLQDRVLSLVIQRCLELDVEIKITDQVRVTAE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007991RNA_pol_I_trans_ini_fac_RRN3