mRNA_P-wetherbeei_contig6444.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6444.1.2
Unique NamemRNA_P-wetherbeei_contig6444.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6444.1.2 vs. uniprot
Match: A0A6H5JAN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAN6_9PHAE)

HSP 1 Score: 127 bits (319), Expect = 9.790e-31
Identity = 80/189 (42.33%), Postives = 108/189 (57.14%), Query Frame = 1
Query:    1 PHAFRELVHALFRFDWSGREPQGKIVRAYVSLVVHLVSVNGTYLLPAMHMLVRNMVARPAELTARLAVALLNPRSPTFHIAKPEIPFVPPRPPSFLSGSAEARAGVAARQAELHRTLRRLLALAPAGCSQLYPVLADHYPHQRLPAEALADYAAQALTVTRYVPLLQDRVLSLVIQRCLELDVEIKITD 567
            P  F+ELV ALFRFDW G +   KIV+++  L+ HLVS N T ++PAMHMLVRN+V  P +L     V                        P+ L+           RQ  +H  L+  L L P+G S+L+ VL  +YPH+RL AE L+DYA  AL V +Y PL+++ VL L+I++ LE+DVEIKI D
Sbjct:   87 PDEFKELVDALFRFDWRGSD---KIVQSFSGLLQHLVSANSTCMVPAMHMLVRNLVLTPRDLDCEGNVD-----------------------PAALT-----------RQHNVHAALQASLTLVPSGRSKLFGVLKQNYPHRRLRAEVLSDYALHALRVVQYAPLIEESVLRLIIEKGLEIDVEIKIMD 238          
BLAST of mRNA_P-wetherbeei_contig6444.1.2 vs. uniprot
Match: D7FL61_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL61_ECTSI)

HSP 1 Score: 127 bits (319), Expect = 1.750e-30
Identity = 80/189 (42.33%), Postives = 108/189 (57.14%), Query Frame = 1
Query:    1 PHAFRELVHALFRFDWSGREPQGKIVRAYVSLVVHLVSVNGTYLLPAMHMLVRNMVARPAELTARLAVALLNPRSPTFHIAKPEIPFVPPRPPSFLSGSAEARAGVAARQAELHRTLRRLLALAPAGCSQLYPVLADHYPHQRLPAEALADYAAQALTVTRYVPLLQDRVLSLVIQRCLELDVEIKITD 567
            P  F+ELV ALFRFDW G +   KIV+++  L+ HLVS N T ++PAMHMLVRN+V  P +L     V                        P+ L+           RQ  +H  L+  L L P+G S+L+ VL  +YPH+RL AE L+DYA  AL V +Y PL+++ VL L+I++ LE+DVEIKI D
Sbjct:   44 PDEFKELVDALFRFDWRGSD---KIVQSFSGLLQHLVSANSTCMVPAMHMLVRNLVLTPRDLDCEGNVD-----------------------PAALT-----------RQHNVHAALQASLTLVPSGRSKLFGVLKQNYPHRRLRAEVLSDYALHALRVVQYAPLIEESVLRLIIEKGLEIDVEIKIMD 195          
BLAST of mRNA_P-wetherbeei_contig6444.1.2 vs. uniprot
Match: H3GYT5_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GYT5_PHYRM)

HSP 1 Score: 99.4 bits (246), Expect = 9.780e-21
Identity = 77/207 (37.20%), Postives = 109/207 (52.66%), Query Frame = 1
Query:    1 PHAFRELVHALFRFDW-SGREPQGKIVRAYVSLVVHLVSVNGTYLLPAMHMLVRNM-----VARPAELTARL------------AVALLNPRSPTFHIAKPEIPFVPPRPPSFLSGSAEARAGVAARQAELHRTLRRLLALAPAGCSQLYPVLADHYPHQRLPAEALADYAAQALTVTRYVPLLQDRVLSLVIQRCLELDVEIKITD 567
            P A+R L+  LF+FD  +  +P    V  Y S VVHLVS N  Y++P +HMLVRN+        P +L A++            A+A+    S    +A    P V P+ PS L    +AR   A      H TL R+LAL P   + L+P+L +H+PH+R+ A     Y    L VT YV  L++RVL LVI + + +DVEIK+ +
Sbjct:   80 PRAYRALLDVLFKFDMLASGDPLE--VDDYTSFVVHLVSSNTVYVVPTLHMLVRNLRRPQTKELPPDLKAQIQEQETLKPVKTGAIAIGG--SFGADVAAVPTPLVEPKAPS-LDERIQARFEAA------HATLERVLALVPTATNVLFPILCEHFPHKRMDAPTQVAYLRNVLRVTGYVSGLRERVLGLVIDQLVAIDVEIKLDE 275          
BLAST of mRNA_P-wetherbeei_contig6444.1.2 vs. uniprot
Match: A0A3R7JLG2_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JLG2_9STRA)

HSP 1 Score: 99.4 bits (246), Expect = 1.020e-20
Identity = 70/205 (34.15%), Postives = 103/205 (50.24%), Query Frame = 1
Query:    1 PHAFRELVHALFRFDWSGREPQGKIVRAYVSLVVHLVSVNGTYLLPAMHMLVRNMVAR-----PAELTARLAVALLNPRSPTFH-----------IAKPEIPFVPPRPPSFLSGSAEARAGVAARQAELHRTLRRLLALAPAGCSQLYPVLADHYPHQRLPAEALADYAAQALTVTRYVPLLQDRVLSLVIQRCLELDVEIKITD 567
            P A+R L+  LF+FD      +   V  Y+S VVHLVS N  Y++P +HMLVRN+        P +L + L      P+  T             +A+   P V       ++        +  R   +H TL R+LAL P   + L+PVL +H+PH+RL A+    Y    L VT Y+  L++RVL LVI + + +DVEIK+ +
Sbjct:   80 PRAYRALLDVLFKFDLINDYQE---VEDYISFVVHLVSSNTVYVVPTLHMLVRNLCRPQPHQLPPDLRSLLEEESEEPKKKTIAGGITIGGSFGAVAEVTTPVV-----ESVNKGPNLEERIQKRFEAVHETLGRVLALVPTAANFLFPVLCEHFPHKRLDADTQVAYLRNVLRVTSYMSGLRERVLGLVIDQLVAIDVEIKLDE 276          
BLAST of mRNA_P-wetherbeei_contig6444.1.2 vs. uniprot
Match: M4BYS9_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BYS9_HYAAE)

HSP 1 Score: 98.2 bits (243), Expect = 2.520e-20
Identity = 75/206 (36.41%), Postives = 99/206 (48.06%), Query Frame = 1
Query:    1 PHAFRELVHALFRFDWSGREPQGKIVRAYVSLVVHLVSVNGTYLLPAMHMLVRNMVARPA--ELTARLAVALLNPRSPTFHIAKPEI---------------PFVPPRPPSFLSGSAEARAGVAARQAELHRTLRRLLALAPAGCSQLYPVLADHYPHQRLPAEALADYAAQALTVTRYVPLLQDRVLSLVIQRCLELDVEIKITD 567
            P A+R L+  LF+FD  G     + V  Y + +VHLVS N  Y++P +HMLVRNM  RP   ELT  L       +       K  +               P      P     S   R  + AR    H  L R+L LAP   + L+PVL +H+PH+RL A     Y    L VT YV  L++RVL LVI + + +DVEIK+ D
Sbjct:    5 PRAYRVLLDVLFKFDLLGSGDMHE-VEDYTTFIVHLVSSNTVYVVPTLHMLVRNM-RRPQGKELTPELQALAQKEQRNQLEAKKIAVAGGIAMKGSVGDMTTPVTVCAAPESKCLSVNER--IQARFETAHHLLERVLKLAPTASNVLFPVLCEHFPHKRLDASTQVAYLRNMLRVTEYVSGLRERVLGLVIDQLVAIDVEIKLDD 206          
BLAST of mRNA_P-wetherbeei_contig6444.1.2 vs. uniprot
Match: W4H914_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H914_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 3.390e-20
Identity = 65/188 (34.57%), Postives = 102/188 (54.26%), Query Frame = 1
Query:    7 AFRELVHALFRFDWSGREPQGKIVRAYVSLVVHLVSVNGTYLLPAMHMLVRNM--VARPAELTAR-LAVALLNPRSPTFHIAKPEIPFVPPRPPSFLSGSAEARAGVAARQAELHRTLRRLLALAPAGCSQLYPVLADHYPHQRLPAEALADYAAQALTVTRYVPLLQDRVLSLVIQRCLELDVEIKI 561
            A+ ELVH ++ FD+    P   I+ AY+ L+ HLV+ + ++L P +HMLVRN+  V RPA L+   LAV + +  +    I  P +       PS    +A+  A +  R A +H    ++L L PA    ++  L ++YPH+RL       Y      +T Y   LQ+RVL LV+++ + +DVEIK+
Sbjct:   85 AYHELVHRIYTFDFLTTMP---IIDAYIRLITHLVTAHTSFLQPTIHMLVRNLLRVPRPAPLSVSPLAVQIKSTLTRRVSIGIPTVN----SGPSEAELAAQFEASLQQRFASVHAAFEKVLHLVPASIHHVFQCLCEYYPHKRLETPIQLSYLTNLFQLTTYAKGLQERVLGLVVEKLVAIDVEIKL 265          
BLAST of mRNA_P-wetherbeei_contig6444.1.2 vs. uniprot
Match: A0A6G0XP88_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XP88_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 8.320e-20
Identity = 64/191 (33.51%), Postives = 101/191 (52.88%), Query Frame = 1
Query:    7 AFRELVHALFRFDWSGREPQGKIVRAYVSLVVHLVSVNGTYLLPAMHMLVRNM--VARPAELTA----RLAVALLNPRSPTFHIAKPEIPFVPPRPPSFLSGSAEARAGVAARQAELHRTLRRLLALAPAGCSQLYPVLADHYPHQRLPAEALADYAAQALTVTRYVPLLQDRVLSLVIQRCLELDVEIKI 561
            A+ EL+H ++ FD+   +P   I+ AY+ L+ H V+ + T+L P +HMLVRN   VARP +  A     +A + LN R     ++ P +P V     S     AE    +  R A +H    ++L L P     ++P L DH+PH+R+       Y      +T Y   LQ+RV+ LV+++ + +DVEIK+
Sbjct:   72 AYYELIHRIYTFDFMTSQP---IIDAYIRLITHFVTAHTTFLQPTIHMLVRNFLRVARPQKAAAPAPPSIASSTLNRR-----MSIPAVPAV-----SEAQLEAEFEESLQRRFASVHVAFAKVLDLVPTSIHHVFPCLCDHFPHKRIETPFQLSYLNNLFKLTTYAKGLQERVVGLVVEKLVSIDVEIKL 249          
BLAST of mRNA_P-wetherbeei_contig6444.1.2 vs. uniprot
Match: A0A484EDU3_BRELC (Uncharacterized protein n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484EDU3_BRELC)

HSP 1 Score: 96.7 bits (239), Expect = 8.780e-20
Identity = 66/200 (33.00%), Postives = 105/200 (52.50%), Query Frame = 1
Query:    1 PHAFRELVHALFRFDWSGREPQGKIVRA--YVSLVVHLVSVNGTYLLPAMHMLVRNM-VARPAELTARL--------AVALLNPRSPTFHIAKPEIPFVPPRPPSFLSGSAEARAGVAARQAELHRTLRRLLALAPAGCSQLYPVLADHYPHQRLPAEALADYAAQALTVTRYVPLLQDRVLSLVIQRCLELDVEIKITD 567
            P A+R L+  LF+FD       G +  A  Y + ++HLVS N TY+ P +HML RNM +++  EL   L        A+  L+  + +  +    I    P  P  ++     +  + AR A  H+ L R++ L P   + L+P+L +H+PH+R+ A     Y    L +T YV  L++RVL LVI + + +DVEIK+ +
Sbjct:   77 PQAYRVLLDVLFKFDLLA---SGDVSEAEDYATFIIHLVSSNTTYVWPTLHMLARNMGISQEKELPPDLRALGKTEDALKNLSYSTASGSLGSNSIE---PGTPVLVTKEPSLQECILARYAAAHQMLERIITLVPTASNVLFPILCEHFPHKRMDAPTQVAYLRNVLRITEYVGGLRERVLGLVIDQLVAIDVEIKLDE 270          
BLAST of mRNA_P-wetherbeei_contig6444.1.2 vs. uniprot
Match: A0A662XUA0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XUA0_9STRA)

HSP 1 Score: 95.5 bits (236), Expect = 2.250e-19
Identity = 70/200 (35.00%), Postives = 100/200 (50.00%), Query Frame = 1
Query:    1 PHAFRELVHALFRFDW-SGREPQGKIVRAYVSLVVHLVSVNGTYLLPAMHMLVRNMVARPA--ELTARLAVALLNPRSPTFHIAKPEI--------PFVPPRPPSFLSGSAEARAGVAARQAELHRTLRRLLALAPAGCSQLYPVLADHYPHQRLPAEALADYAAQALTVTRYVPLLQDRVLSLVIQRCLELDVEIKITD 567
            P A+R L+  LF+FD  +G +P     + Y   VVHLVS N  Y++P +HMLVRN+  RP   +L   L        +    + KP              P P      +      +  R    H TL R+LAL P   + L+PVL +H+PH+R+ A     Y    L VT YV  L++RVL+LVI + + +DVEIK+ +
Sbjct:  159 PRAYRALLDVLFKFDLLAGDDPLE--AQDYARFVVHLVSSNTVYVIPTLHMLVRNL-CRPQLHQLPPALQTQARAEAAAEAELKKPSNGVTIAIGGSMASPVPTEEKKKAPSLDERIQMRFDAAHATLERVLALVPTAANVLFPVLCEHFPHKRMDAATQVAYLRNVLRVTTYVSGLRERVLALVIDQLVAIDVEIKLDE 355          
BLAST of mRNA_P-wetherbeei_contig6444.1.2 vs. uniprot
Match: A0A024UUA9_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UUA9_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 7.360e-19
Identity = 65/193 (33.68%), Postives = 100/193 (51.81%), Query Frame = 1
Query:    7 AFRELVHALFRFDWSGREPQGKIVRAYVSLVVHLVSVNGTYLLPAMHMLVRNM--VARPAELTAR-LAVALLNPRS-----PTFHIAKPEIPFVPPRPPSFLSGSAEARAGVAARQAELHRTLRRLLALAPAGCSQLYPVLADHYPHQRLPAEALADYAAQALTVTRYVPLLQDRVLSLVIQRCLELDVEIKI 561
            A+ ELVH ++ FD+    P   ++ AY+ L+ HLV+ + ++L P +HMLVRN+  V RPA ++   LAV + +  S     P  H             PS    +AE    +  R A +H    ++L L PA    ++  L D+YPH+RL       Y      +T Y   LQ+RVL LV+++ + +DVEIK+
Sbjct:   89 AYHELVHRIYTFDFLTTMP---VIEAYIRLITHLVTAHTSFLQPTIHMLVRNLQRVPRPAPVSVSPLAVQIKSTLSRRVSIPAIHAG-----------PSEADLNAEFEVVLQQRFAAVHVAFEKVLQLVPASIHHVFHCLCDYYPHKRLETPIQLSYLNNLFQLTTYAKGLQERVLGLVVEKLVAIDVEIKL 267          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6444.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAN6_9PHAE9.790e-3142.33Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FL61_ECTSI1.750e-3042.33Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
H3GYT5_PHYRM9.780e-2137.20Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
A0A3R7JLG2_9STRA1.020e-2034.15Uncharacterized protein n=4 Tax=Phytophthora kerno... [more]
M4BYS9_HYAAE2.520e-2036.41Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
W4H914_9STRA3.390e-2034.57Uncharacterized protein n=5 Tax=Aphanomyces astaci... [more]
A0A6G0XP88_9STRA8.320e-2033.51Uncharacterized protein n=2 Tax=Aphanomyces euteic... [more]
A0A484EDU3_BRELC8.780e-2033.00Uncharacterized protein n=1 Tax=Bremia lactucae Ta... [more]
A0A662XUA0_9STRA2.250e-1935.00Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
A0A024UUA9_9STRA7.360e-1933.68Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6444contigP-wetherbeei_contig6444:155..1175 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FL61
Preferred nameRRN3
PFAMsRRN3
Model size588
Max annot lvl2759|Eukaryota
KEGG koko:K15216
Hectar predicted targeting categoryother localisation
GOsGO:0000120,GO:0000182,GO:0000976,GO:0001013,GO:0001042,GO:0001046,GO:0001047,GO:0001067,GO:0001163,GO:0001164,GO:0001167,GO:0001169,GO:0001179,GO:0001181,GO:0001188,GO:0001701,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003700,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005730,GO:0006139,GO:0006351,GO:0006352,GO:0006355,GO:0006356,GO:0006360,GO:0006361,GO:0006725,GO:0006807,GO:0006996,GO:0006997,GO:0007000,GO:0007028,GO:0007275,GO:0007399,GO:0008134,GO:0008150,GO:0008152,GO:0008283,GO:0009058,GO:0009059,GO:0009303,GO:0009790,GO:0009792,GO:0009889,GO:0009891,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010628,GO:0010646,GO:0010648,GO:0010720,GO:0010941,GO:0010975,GO:0010976,GO:0016043,GO:0016070,GO:0016072,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019827,GO:0019899,GO:0022008,GO:0022607,GO:0022613,GO:0023051,GO:0023057,GO:0030154,GO:0030718,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031344,GO:0031346,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0032774,GO:0032991,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034660,GO:0036099,GO:0042254,GO:0042592,GO:0042790,GO:0042981,GO:0043009,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043565,GO:0043933,GO:0044085,GO:0044087,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044452,GO:0044464,GO:0044798,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045893,GO:0045935,GO:0046483,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0048872,GO:0050767,GO:0050769,GO:0050789,GO:0050793,GO:0050794,GO:0051094,GO:0051128,GO:0051130,GO:0051171,GO:0051173,GO:0051239,GO:0051240,GO:0051252,GO:0051254,GO:0051960,GO:0051962,GO:0060255,GO:0060284,GO:0060548,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0070063,GO:0070897,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:0097659,GO:0098727,GO:0098781,GO:0120035,GO:0140110,GO:0140223,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901796,GO:1901797,GO:1902253,GO:1902254,GO:1902531,GO:1902532,GO:1902680,GO:1903506,GO:1903508,GO:1990837,GO:2000026,GO:2000112,GO:2000142,GO:2001141,GO:2001233,GO:2001234,GO:2001242,GO:2001243
Exons3
Evalue2.87e-31
EggNOG OGsKOG2434@1|root,KOG2434@2759|Eukaryota
Descriptionrna polymerase i-specific transcription initiation factor
Cds size588
COG categoryO
BRITEko00000,ko03021
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186913.9830227-CDS-P-wetherbeei_contig6444:154..2411683186913.9830227-CDS-P-wetherbeei_contig6444:154..241Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6444 155..241 -
1683186913.9974318-CDS-P-wetherbeei_contig6444:439..7501683186913.9974318-CDS-P-wetherbeei_contig6444:439..750Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6444 440..750 -
1683186914.0055358-CDS-P-wetherbeei_contig6444:985..11751683186914.0055358-CDS-P-wetherbeei_contig6444:985..1175Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6444 986..1175 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6444.1.2prot_P-wetherbeei_contig6444.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6444 155..1175 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6444.1.2

>prot_P-wetherbeei_contig6444.1.2 ID=prot_P-wetherbeei_contig6444.1.2|Name=mRNA_P-wetherbeei_contig6444.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=196bp
PHAFRELVHALFRFDWSGREPQGKIVRAYVSLVVHLVSVNGTYLLPAMHM
LVRNMVARPAELTARLAVALLNPRSPTFHIAKPEIPFVPPRPPSFLSGSA
EARAGVAARQAELHRTLRRLLALAPAGCSQLYPVLADHYPHQRLPAEALA
DYAAQALTVTRYVPLLQDRVLSLVIQRCLELDVEIKITDQVRVTAE
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mRNA from alignment at P-wetherbeei_contig6444:155..1175-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6444.1.2 ID=mRNA_P-wetherbeei_contig6444.1.2|Name=mRNA_P-wetherbeei_contig6444.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1021bp|location=Sequence derived from alignment at P-wetherbeei_contig6444:155..1175- (Phaeothamnion wetherbeei SAG_119_79)
CCACACGCCTTCAGGGAGCTGGTCCACGCTCTGTTCCGCTTCGACTGGTC GGGCCGGGAGCCCCAGGGGAAGATCGTGCGGGCCTACGTGTCCCTCGTCG TCCACCTCGTGTCCGTCAACGGCACGTACCTCCTGCCGGCCATGCACATG CTCGTGCGCAACATGGTCGCGCGGCCCGCCGAGCTGACAGGTGCGAAGTA GCTTGCGTACTTTTTTCAGTTCCTCCCCGCCGTCCAGTTCTCTTACCTTT CCTTGCCGTCACCGTGTTCTGGTAAAGTGCTGCAAGGCCTGTTATTGTCC TCGATTGGCCGTCGTCCGGAACGCCACGCCTAGAAAATCAGTAGCATGTC ACACGAGTGTTTGCGAAAATCGGAGGGTGAGGTCGGCCTCGGCCGTTGAT CAGCCCAAAGCCAAGTAGCACAAAGCTCGTCTTGCCGTCGCTTTGCTCAA TCCTCGTTCCCCGACGTTCCACATCGCTAAACCGGAAATCCCGTTCGTCC CGCCCCGTCCTCCCTCATTTCTCTCAGGCTCAGCCGAGGCGCGGGCTGGG GTGGCGGCGCGGCAAGCGGAGCTGCACCGAACGCTGCGACGGCTGCTGGC GCTGGCGCCGGCGGGCTGCAGCCAGCTGTATCCGGTGCTGGCGGACCACT ACCCGCACCAGCGGCTGCCGGCGGAGGCGCTAGCCGACTACGCGGCGCAG GCCCTCACCGTCACGCGCTACGTGCCCCTGCTGCAGGTGGGATGAACGGT TACATTTCGAACGGTTTCGTTGGTTTCGTTTTCTAGCAGAGACGCGAATG GCCTCCGCAGGGAATAATAAAGGCGGGACAGATTGTGAAATAACATGCGT GCTTTCCGTGTGCCCTGCTTGTCCTGGTTTTGTTATAACTGTTGCATTCG CCATCGTGACGGCGGATCTCTGCTATTCTTCCAGGACCGCGTGCTGTCTC TGGTGATTCAGCGCTGCCTGGAGCTTGATGTTGAGATCAAGATCACCGAC CAGGTACGAGTGACGGCAGAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6444:155..1175-

>mRNA_P-wetherbeei_contig6444.1.2 ID=mRNA_P-wetherbeei_contig6444.1.2|Name=mRNA_P-wetherbeei_contig6444.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=588bp|location=Sequence derived from alignment at P-wetherbeei_contig6444:155..1175- (Phaeothamnion wetherbeei SAG_119_79)
CCACACGCCTTCAGGGAGCTGGTCCACGCTCTGTTCCGCTTCGACTGGTC
GGGCCGGGAGCCCCAGGGGAAGATCGTGCGGGCCTACGTGTCCCTCGTCG
TCCACCTCGTGTCCGTCAACGGCACGTACCTCCTGCCGGCCATGCACATG
CTCGTGCGCAACATGGTCGCGCGGCCCGCCGAGCTGACAGCTCGTCTTGC
CGTCGCTTTGCTCAATCCTCGTTCCCCGACGTTCCACATCGCTAAACCGG
AAATCCCGTTCGTCCCGCCCCGTCCTCCCTCATTTCTCTCAGGCTCAGCC
GAGGCGCGGGCTGGGGTGGCGGCGCGGCAAGCGGAGCTGCACCGAACGCT
GCGACGGCTGCTGGCGCTGGCGCCGGCGGGCTGCAGCCAGCTGTATCCGG
TGCTGGCGGACCACTACCCGCACCAGCGGCTGCCGGCGGAGGCGCTAGCC
GACTACGCGGCGCAGGCCCTCACCGTCACGCGCTACGTGCCCCTGCTGCA
GGACCGCGTGCTGTCTCTGGTGATTCAGCGCTGCCTGGAGCTTGATGTTG
AGATCAAGATCACCGACCAGGTACGAGTGACGGCAGAA
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