mRNA_P-wetherbeei_contig6433.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6433.1.2
Unique NamemRNA_P-wetherbeei_contig6433.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6433.1.2 vs. uniprot
Match: D8LKQ5_ECTSI (Eukaryotic initiation factor 4G n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKQ5_ECTSI)

HSP 1 Score: 204 bits (519), Expect = 6.320e-53
Identity = 128/295 (43.39%), Postives = 175/295 (59.32%), Query Frame = 1
Query:  817 PVDTAPALEDCEPLTINEETRWKPSNVLKKAEAXXXXXXXXXXXXXXXXXXXXXXXXXAAVLATAPAMGAEARALVLRRARGILNKMTLEKFELLSGEFLTNVSAQNQETVSEVVAAVVTKAQMERHFSSMYAELCLRLARSPMPGL--DA---DSAKGAKKFRKMLLESCQLEFERDVGAELQAVKENGSLDADERTEMELKIRQRYTGHMRFIGELYKAELLRVKHVCAALDTLWEGGTAGGTGAESELDEERLECYIRLMTTVGKTMESTTQDKDTVKVVKRHFEQIKKLSE 1686
            PVDTAPALEDC+P+ INE TRWKP ++    +A                                          VL +A  ILNKMTLEKF+ LS  F+ +V  ++ + VS V+  +V KAQME HFSSMYA+LC R+AR+P+ GL  DA   D++KG+KKFRKMLL   Q EFE+D      AV+ + +L  DE+ E E  ++++YTGHMRF+GELYK ELL+ KHV AA+  ++        G   E DEERLEC ++L+ T GK ++ T    D VK +KR F+++ K+++
Sbjct:  264 PVDTAPALEDCKPIEINEATRWKPKSLETTGKAEDKLPTEK----------------------------------VLMKANAILNKMTLEKFDKLSVTFM-DVGLRDPKVVSGVIDIIVEKAQMEPHFSSMYADLCARIARTPIAGLGEDATGKDASKGSKKFRKMLLVKVQQEFEKDWQGLFAAVQSDSTLADDEKAEKEFGLKRKYTGHMRFVGELYKVELLKEKHVHAAIHDMF--------GNADEPDEERLECMVKLLQTCGKKLDHTGSP-DIVKDMKRLFKRVGKVAD 514          
BLAST of mRNA_P-wetherbeei_contig6433.1.2 vs. uniprot
Match: A0A6H5L9P4_9PHAE (MI domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9P4_9PHAE)

HSP 1 Score: 203 bits (516), Expect = 1.290e-52
Identity = 130/298 (43.62%), Postives = 176/298 (59.06%), Query Frame = 1
Query:  817 PVDTAPALEDCEPLTINEETRWKPSNVLKKAEAXXXXXXXXXXXXXXXXXXXXXXXXXAAVLATAPAMGAEARALVLRRARGILNK---MTLEKFELLSGEFLTNVSAQNQETVSEVVAAVVTKAQMERHFSSMYAELCLRLARSPMPGL--DA---DSAKGAKKFRKMLLESCQLEFERDVGAELQAVKENGSLDADERTEMELKIRQRYTGHMRFIGELYKAELLRVKHVCAALDTLWEGGTAGGTGAESELDEERLECYIRLMTTVGKTMESTTQDKDTVKVVKRHFEQIKKLSE 1686
            PVDTAPALEDC+P+ INE TRWKP ++  K +A                                          VL +A  ILNK   MTLEKF+ LS  F+ +V  ++ E VS V+  +V KAQME HFSSMYA+LC R+AR+P+ GL  DA   D++KG+KKFRKMLL   Q EFE+D      AV+ + +L  DE+ E E  ++++YTGHMRF+GELYK ELL+ KHV AA+  ++        G   E DEERLEC ++L+ T GK ++ T    D VK +KR F+++ K+++
Sbjct:  231 PVDTAPALEDCKPIEINEATRWKPKSLKAKDKAEDELPTEE----------------------------------VLMKANAILNKARMMTLEKFDKLSVTFM-DVGLRDPEVVSGVIDIIVEKAQMEPHFSSMYADLCARIARTPIAGLGEDATGKDASKGSKKFRKMLLVKVQQEFEKDWQGLFAAVQSDSTLAEDEKAEKEFGLKRKYTGHMRFVGELYKVELLKEKHVHAAIHDMF--------GNADEPDEERLECMVKLLQTCGKKLDQTGSP-DIVKDMKRLFKRVGKVAD 484          
BLAST of mRNA_P-wetherbeei_contig6433.1.2 vs. uniprot
Match: A0A836CBQ1_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBQ1_9STRA)

HSP 1 Score: 186 bits (472), Expect = 4.200e-47
Identity = 117/275 (42.55%), Postives = 162/275 (58.91%), Query Frame = 1
Query:  862 INEETRWKPSNVLKKAEAXXXXXXXXXXXXXXXXXXXXXXXXXAAVLATAPAMGAEARALVLRRARGILNKMTLEKFELLSGEFLTNVSAQNQETVSEVVAAVVTKAQMERHFSSMYAELCLRLARSPMPGLDADSAKGAKKFRKMLLESCQLEFERDVGAELQAVKENGSLDADERTEMELKIRQRYTGHMRFIGELYKAELLRVKHVCAALDTLWEGGTAGGTGAESELDEERLECYIRLMTTVGKTMESTTQDKDTVKVVKRHFEQIKKLSE 1686
            +NE TRWK  ++L++ EA                          A L  A    AE   +++RRA  +LNKMTLEKF+ LS +F T+V     E V  +++++V KAQME HF+ MYA+LCLRL+ + +P    D+  G K FRKMLLE CQ EF +D    +Q +K + SL  +E+ E EL +++RYTGHMRF+GELYK  LL+ K+V  +++ L      G        DEE+LEC ++LM+TVG  ME      D VK  KR+F++IKKLSE
Sbjct:   31 VNEGTRWKAKHMLEEEEA--------------------------AKLEAA----AEDPEIIMRRAIALLNKMTLEKFDKLSAQF-TDVGFTTVELVDRIISSLVEKAQMEAHFAPMYAKLCLRLSEAQLPAF-RDAKNGPKMFRKMLLEHCQEEFGKDTADIIQGIKSDSSLTPEEQAERELIVKRRYTGHMRFVGELYKVGLLKEKYVHLSIEELLGMEEDGNVMP----DEEKLECMVKLMSTVGAQMEQHPSSPDFVKNFKRYFKRIKKLSE 269          
BLAST of mRNA_P-wetherbeei_contig6433.1.2 vs. uniprot
Match: B8BXR3_THAPS (Eukaryotic translation initiation factor eIF4G (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXR3_THAPS)

HSP 1 Score: 175 bits (444), Expect = 8.630e-47
Identity = 107/281 (38.08%), Postives = 164/281 (58.36%), Query Frame = 1
Query:  811 RKPVDTAPALEDCEPLTINEETRWKPSNVLKKAEAXXXXXXXXXXXXXXXXXXXXXXXXXAAVLATAPAMGAEARALVLRRARGILNKMTLEKFELLSGEFLTNVSAQNQETVSEVVAAVVTKAQMERHFSSMYAELCLRLARSPMPGLDADSAKGAKKFRKMLLESCQLEFERDVGAELQAVKENGSLDADERTEMELKIRQRYTGHMRFIGELYKAELLRVKHVCAALDTLWEGGTAGGTGAESELDEERLECYIRLMTTVGKTMESTTQD-KDTVKVV 1650
            + P DTAP LEDC+P+ +NEETRWK + V +  E                              A A   G +++  V+R+A  ILNK++L KF+ LS EF+     ++ E ++E V+ +V KAQ E+HFSSMYA LCL+LA +P  G+D DS K  KKF+K+LL+ CQ EFE +  A+++A  ++ + D +E       +++ Y GHMRFIGELYK +++ +K +   L  L  G       A   +DEE++EC+ +LMT +G ++E  ++  K TV+++
Sbjct:   10 KNPNDTAPLLEDCKPIEVNEETRWK-AKVFEGKEGE----------------------------AAAVTEGEDSKEEVIRKALLILNKLSLTKFDKLSDEFINCGIGRDVECLTEAVSLIVNKAQEEQHFSSMYAGLCLKLAGTPFEGIDDDSGKKGKKFKKILLQRCQDEFETETSAKIEAATKDIT-DEEEIAYHANLLKKHYLGHMRFIGELYKGDMISIKIMLFCLPQLLMGE------APKTVDEEKIECFAKLMTVIGSSLEQQSEAMKSTVEIM 254          
BLAST of mRNA_P-wetherbeei_contig6433.1.2 vs. uniprot
Match: A0A7S2KXG3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2KXG3_9STRA)

HSP 1 Score: 169 bits (429), Expect = 1.510e-42
Identity = 102/271 (37.64%), Postives = 157/271 (57.93%), Query Frame = 1
Query:  817 PVDTAPALEDCEPLTINEETRWKPSNVL-KKAEAXXXXXXXXXXXXXXXXXXXXXXXXXAAVLATAPAMGAEARALVLRRARGILNKMTLEKFELLSGEFLTNVSAQNQETVSEVVAAVVTKAQMERHFSSMYAELCLRLARSPMPGLDADSAKGAKKFRKMLLESCQLEFERDVGAELQAVKENGSLDADERTEMELKIRQRYTGHMRFIGELYKAELLRVKHVCAALDTLWEGGTAGGTGAESELDEERLECYIRLMTTVGKTMESTTQ 1626
            P DTAPALEDC+PL +NEETRWK    + K+ EA                                     E++  +LRRA  ILNK++L KF+ LS  F+     ++ + ++  V  +V KAQ E+HF+SMYA LCL+++++PM G+D  + KG KKF+K+LLE CQ EFE D   +++   + G  DA+E       I++ Y GHMRFIGELY  +L+ ++ +   L TL +G +   +G   ++DEE++EC+ +L+T +G ++E  ++
Sbjct:  283 PNDTAPALEDCKPLQVNEETRWKAKVFVGKEGEADEDE-------------------------------AVESKEEILRRALLILNKLSLTKFDKLSDAFINCGIGRDIDCLTGAVGMIVNKAQEEQHFASMYAGLCLKMSKTPMEGIDEGTKKG-KKFKKILLERCQSEFETDAATKVKEATK-GITDAEEIEYHTNLIKKHYLGHMRFIGELYNGDLISIRIMLFCLPTLLKGESDDSSG---DVDEEKIECFAKLITVIGSSLEQQSE 517          
BLAST of mRNA_P-wetherbeei_contig6433.1.2 vs. uniprot
Match: K0RPP6_THAOC (MI domain-containing protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RPP6_THAOC)

HSP 1 Score: 170 bits (430), Expect = 2.920e-41
Identity = 104/268 (38.81%), Postives = 151/268 (56.34%), Query Frame = 1
Query:  823 DTAPALEDCEPLTINEETRWKPSNVLKKAEAXXXXXXXXXXXXXXXXXXXXXXXXXAAVLATAPAMGAEARALVLRRARGILNKMTLEKFELLSGEFLTNVSAQNQETVSEVVAAVVTKAQMERHFSSMYAELCLRLARSPMPGLDADSAKGAKKFRKMLLESCQLEFERDVGAELQAVKENGSLDADERTEMELKIRQRYTGHMRFIGELYKAELLRVKHVCAALDTLWEGGTAGGTGAESELDEERLECYIRLMTTVGKTMESTTQ 1626
            DTAPALEDC+PL +N++TRWK    + K E                                    G + +  +LR+A  ILNK++L KF+ LS  F+     ++ + ++  V  +VTKAQ E+HF+SMYA LCL+LA +PM G+D  S KG KKF+K+LLE CQ EFE+D   ++    E G  D D        I++ Y GHMRFIGELYK +LL +K +   L +L +G +        E+DEE++EC+ +LMT +G ++E  ++
Sbjct:  278 DTAPALEDCKPLEVNDDTRWKAK--VFKGEGGAESGE-----------------------------GDDGKDEILRKAMLILNKLSLTKFDKLSNAFIDCGIGRDIDCLTGAVEMIVTKAQEEQHFASMYASLCLKLASTPMEGMDEGSKKG-KKFKKILLERCQTEFEKDAATKIAEATE-GITDKDLIEYHSTLIKKHYLGHMRFIGELYKCDLLSIKIILFCLPSLLKGDSEHS----DEVDEEKVECFSKLMTVIGSSLEQQSE 508          
BLAST of mRNA_P-wetherbeei_contig6433.1.2 vs. uniprot
Match: A0A7S4VDN4_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VDN4_9STRA)

HSP 1 Score: 166 bits (421), Expect = 5.320e-41
Identity = 104/285 (36.49%), Postives = 157/285 (55.09%), Query Frame = 1
Query:  811 RKPVDTAPALEDCEPLTINEETRWKPSNVLKKAEAXXXXXXXXXXXXXXXXXXXXXXXXXAAVLATAPAMGAEARALVLRRARGILNKMTLEKFELLSGEFLTNVSAQNQETVSEVVAAVVTKAQMERHFSSMYAELCLRLARSPMPGLDA---DSAKGAKKFRKMLLESCQLEFERDVGAELQAVKENGSLDADERTEMEL-KIRQRYTGHMRFIGELYKAELLRVKHVCAALDTLWEGGTAGGTGAESELDEE------------RLECYIRLMTTVGKTMES 1617
            ++ V+TAP LE+C+PL +N++TRWK +NV  K +                                      ++ ALVL++A  ILNK++L KF+ LS +F+     +N+E +   ++ +V KAQ E HFS+MYA LCL+LAR+P  G++     S+K  KKF+KMLL  CQ EFE+D   ++Q   E   +D DE  E E  K+++ Y GHMRFIGELYK +L+ +K +   L  L EG T      E   D+             ++EC+ +LMT +G+++E+
Sbjct:  264 KRVVETAPPLEECKPLEVNDDTRWK-ANVFDKEKKTEEDE--------------------------------QSDALVLKKAFVILNKLSLTKFDKLSDDFINTGIGRNEECLQGAISLIVGKAQDEPHFSAMYAALCLKLARTPFDGIEEPSKSSSKKGKKFKKMLLSRCQEEFEQDTATKVQKATEG--IDDDEEKEYEANKVKKHYLGHMRFIGELYKGDLISIKIMLLCLPALLEGETTPQKPKEEGDDQXXXXXXXXXXXXXKVECFAKLMTVIGQSLEA 513          
BLAST of mRNA_P-wetherbeei_contig6433.1.2 vs. uniprot
Match: A0A7S4S9Z9_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4S9Z9_9STRA)

HSP 1 Score: 166 bits (421), Expect = 4.490e-40
Identity = 104/285 (36.49%), Postives = 157/285 (55.09%), Query Frame = 1
Query:  811 RKPVDTAPALEDCEPLTINEETRWKPSNVLKKAEAXXXXXXXXXXXXXXXXXXXXXXXXXAAVLATAPAMGAEARALVLRRARGILNKMTLEKFELLSGEFLTNVSAQNQETVSEVVAAVVTKAQMERHFSSMYAELCLRLARSPMPGLDA---DSAKGAKKFRKMLLESCQLEFERDVGAELQAVKENGSLDADERTEMEL-KIRQRYTGHMRFIGELYKAELLRVKHVCAALDTLWEGGTAGGTGAESELDEE------------RLECYIRLMTTVGKTMES 1617
            ++ V+TAP LE+C+PL +N++TRWK +NV  K +                                      ++ ALVL++A  ILNK++L KF+ LS +F+     +N+E +   ++ +V KAQ E HFS+MYA LCL+LAR+P  G++     S+K  KKF+KMLL  CQ EFE+D   ++Q   E   +D DE  E E  K+++ Y GHMRFIGELYK +L+ +K +   L  L EG T      E   D+             ++EC+ +LMT +G+++E+
Sbjct:  264 KRVVETAPPLEECKPLEVNDDTRWK-ANVFDKEKKTEEDE--------------------------------QSDALVLKKAFVILNKLSLTKFDKLSDDFINTGIGRNEECLQGAISLIVGKAQDEPHFSAMYAALCLKLARTPFDGIEEPSKSSSKKGKKFKKMLLSRCQEEFEQDTATKVQKATEG--IDDDEEKEYEANKVKKHYLGHMRFIGELYKGDLISIKIMLLCLPALLEGETTPQKPKEEGDDQXXXXXXXXXXXXXKVECFAKLMTVIGQSLEA 513          
BLAST of mRNA_P-wetherbeei_contig6433.1.2 vs. uniprot
Match: A0A7S1ZM64_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZM64_TRICV)

HSP 1 Score: 155 bits (393), Expect = 9.710e-39
Identity = 90/210 (42.86%), Postives = 129/210 (61.43%), Query Frame = 1
Query: 1042 VLRRARGILNKMTLEKFELLSGEFLTNVSAQNQETVSEVVAAVVTKAQMERHFSSMYAELCLRLARSPMPGLDADSAKGAKKFRKMLLESCQLEFERDVGAELQAVKENGSLDADERTEMELKIRQRYTGHMRFIGELYKAELLRVKHVCAALDTLWEGGTAGGT-------------GAES--ELDEERLECYIRLMTTVGKTMESTTQ 1626
            +L++A  ILNK++L KF+ LS  F+       + T+   V  +V KAQ E HFS+MYA LCL+LAR+P+P L+  S K  KKF+KMLLE CQ EFE+D   ++Q   E G  D +ER +    +++ Y  HMRFIGELYK +L+ +K +   L  L EG T   T             GA+S  E+DEE++EC+ +LMTT+G ++E  ++
Sbjct:   19 ILKKALLILNKLSLTKFDKLSDAFIDTGIGLRESTLHGAVGLIVKKAQDEPHFSAMYAGLCLKLARTPLP-LEEGSTKKGKKFKKMLLERCQEEFEQDTATKIQLAIE-GVEDKEEREQKAALVKKHYLSHMRFIGELYKGDLISIKIILFCLPALLEGETFSATEEKKDAEAEEEDDGADSDDEVDEEKVECFAKLMTTIGSSLEQQSE 226          
BLAST of mRNA_P-wetherbeei_contig6433.1.2 vs. uniprot
Match: A0A7S2KBC3_9STRA (Hypothetical protein n=2 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KBC3_9STRA)

HSP 1 Score: 159 bits (403), Expect = 6.770e-38
Identity = 104/277 (37.55%), Postives = 158/277 (57.04%), Query Frame = 1
Query:  823 DTAPALEDCEPLTINEETRWKPSNVLK---KAEAXXXXXXXXXXXXXXXXXXXXXXXXXAAVLATAPAMGAEARALVLRRARGILNKMTLEKFELLSGEFLTNVSAQNQETVSEVVAAVVTKAQMERHFSSMYAELCLRLARSPMPGLDADSA-KGAKKFRKMLLESCQLEFERDVGAEL-QAVKENGSLDADERTEMELK---IRQRYTGHMRFIGELYKAELLRVKHVCAALDTLWEGGTAGGTGAE-SELDEERLECYIRLMTTVGKTMESTTQ 1626
            DTAP LE+C PL  N+ETRWK + V K   K E                                      E   ++++RA   LNK+TL KF+++S +F+     +NQE ++E ++ +V+KAQ E HF++MYA LCL+LA +PM     ++A K  KKF+K+LLE CQ+EFE+D    + +AVK     D ++  E E +   I++ Y GHM+FIGELYK +LL +K +   L  L +G     +G E + +DEE++EC+ +LMTT+G+ +E  ++
Sbjct:  212 DTAPPLEECVPLEKNDETRWK-AKVFKGEFKEE--------------------------------------ETDEVIMKRALFCLNKLTLTKFDVVSDKFIETGIGRNQECLTEAISLIVSKAQGEPHFAAMYASLCLKLAITPMEATGEEAANKRGKKFKKLLLERCQVEFEKDTNEVIAEAVK-----DVEDEAEKEYQAGIIKKNYLGHMQFIGELYKGDLLSIKIMLVCLPELLQG-----SGDEKNSVDEEKVECFTKLMTTIGERLEHQSE 439          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6433.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LKQ5_ECTSI6.320e-5343.39Eukaryotic initiation factor 4G n=1 Tax=Ectocarpus... [more]
A0A6H5L9P4_9PHAE1.290e-5243.62MI domain-containing protein n=1 Tax=Ectocarpus sp... [more]
A0A836CBQ1_9STRA4.200e-4742.55Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
B8BXR3_THAPS8.630e-4738.08Eukaryotic translation initiation factor eIF4G (Fr... [more]
A0A7S2KXG3_9STRA1.510e-4237.64Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
K0RPP6_THAOC2.920e-4138.81MI domain-containing protein n=1 Tax=Thalassiosira... [more]
A0A7S4VDN4_9STRA5.320e-4136.49Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S4S9Z9_9STRA4.490e-4036.49Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7S1ZM64_TRICV9.710e-3942.86Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
A0A7S2KBC3_9STRA6.770e-3837.55Hypothetical protein n=2 Tax=Leptocylindrus danicu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6433contigP-wetherbeei_contig6433:3..3020 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LKQ5
PFAMsMA3,MIF4G,eIF_4G1
Model size1687
Max annot lvl2759|Eukaryota
KEGG koko:K03260
KEGG Pathwayko03013,ko05416,map03013,map05416
KEGG ModuleM00428
Hectar predicted targeting categoryother localisation
GOsGO:0000932,GO:0002181,GO:0002183,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003743,GO:0005198,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0006412,GO:0006413,GO:0006518,GO:0006807,GO:0006996,GO:0008135,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0010494,GO:0016043,GO:0016281,GO:0019538,GO:0022607,GO:0022613,GO:0022618,GO:0031369,GO:0032991,GO:0034063,GO:0034622,GO:0034641,GO:0034645,GO:0035770,GO:0036464,GO:0042254,GO:0042273,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043603,GO:0043604,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0065003,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0097159,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990904
Exons6
Evalue3.33e-54
EggNOG OGsKOG0401@1|root,KOG0401@2759|Eukaryota
Descriptiontranslation initiation factor activity
Cds size1533
COG categoryS
BRITEko00000,ko00001,ko00002,ko03012,ko03019
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6433.1.2prot_P-wetherbeei_contig6433.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6433 3..2867 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186913.2298195-CDS-P-wetherbeei_contig6433:2..621683186913.2298195-CDS-P-wetherbeei_contig6433:2..62Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6433 3..62 -
1683186913.2397618-CDS-P-wetherbeei_contig6433:331..5951683186913.2397618-CDS-P-wetherbeei_contig6433:331..595Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6433 332..595 -
1683186913.24818-CDS-P-wetherbeei_contig6433:1092..11181683186913.24818-CDS-P-wetherbeei_contig6433:1092..1118Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6433 1093..1118 -
1683186913.2599373-CDS-P-wetherbeei_contig6433:1384..24271683186913.2599373-CDS-P-wetherbeei_contig6433:1384..2427Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6433 1385..2427 -
1683186913.2714803-CDS-P-wetherbeei_contig6433:2609..26981683186913.2714803-CDS-P-wetherbeei_contig6433:2609..2698Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6433 2610..2698 -
1683186913.279343-CDS-P-wetherbeei_contig6433:2816..28671683186913.279343-CDS-P-wetherbeei_contig6433:2816..2867Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6433 2817..2867 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186913.288187-UTR-P-wetherbeei_contig6433:2867..30201683186913.288187-UTR-P-wetherbeei_contig6433:2867..3020Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6433 2868..3020 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6433.1.2

>prot_P-wetherbeei_contig6433.1.2 ID=prot_P-wetherbeei_contig6433.1.2|Name=mRNA_P-wetherbeei_contig6433.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=511bp
MSTAHLNPEAPAWVPKEPIPLARAADAGAAKDAVITFGDVDTAPATWESI
TNGASSEPSPTCPAVAEEMDVFIGDGIANGTAGDGNVGEGANPGINGDID
GGSSNGRPTYCYSLAELLALRPPDAPGIDRSGSSDGTTDGSTMQLRLSGI
NGRIVLRAGEAVTRQSSRDGWDSSKHGGGGGGGGGGSGKSGGGGGRGGDG
GGKGGGGGGRRGGGGGGGWRKPVDTAPALEDCEPLTINEETRWKPSNVLK
KAEAAAAAYAASPADGGGGSSSASAAAAPAAVLATAPAMGAEARALVLRR
ARGILNKMTLEKFELLSGEFLTNVSAQNQETVSEVVAAVVTKAQMERHFS
SMYAELCLRLARSPMPGLDADSAKGAKKFRKMLLESCQLEFERDVGAELQ
AVKENGSLDADERTEMELKIRQRYTGHMRFIGELYKAELLRVKHVCAALD
TLWEGGTAGGTGAESELDEERLECYIRLMTTVGKTMESTTQDKDTVKVVK
RHFEQIKKLSE
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mRNA from alignment at P-wetherbeei_contig6433:3..3020-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6433.1.2 ID=mRNA_P-wetherbeei_contig6433.1.2|Name=mRNA_P-wetherbeei_contig6433.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3018bp|location=Sequence derived from alignment at P-wetherbeei_contig6433:3..3020- (Phaeothamnion wetherbeei SAG_119_79)
GGAGCTCTGCGTAGCAATACAACACAAAGGGACGTGTTCAAATGGTAGAG AGGTGAAAAGATCAGAAGTCTACAGCTGCTCTCAACAAGGTTTGGATTCA ATCGCGGCGTGAAGGCAAGGCGACGAGCTTGGAGCCACACATCTGGATCC CGAATGTCGACAGCGCACCTGAACCCAGAGGCTCCGGCGTGGGTGCCAAA AGAGGTATGTGCGAGCCACAGACGCCTCTCTAACTCGTGGCCCTTGGTGT CTTGGCAATACTTTTTTCGTTCAATACGAATTGCTGTACTTATTCTCTAT TCCTCCGCTTCCCCCTCTCCAGCCCATACCACTGGCCAGAGCCGCCGATG CGGGTGCGGCGAAAGACGCCGTGATCACTTTTGGTGATGTCGACACTGCG CCTGCAACCTGGTGAGTAATGTAGTTTTGGAAGGATTGACTTCCTAGCTA GACAAAATCGCCCATAACAAAGCTGTTGTAGCGAATAGTTGGCGAGCCTT GTGTTGCCGTTACCCTTAGACCGCATGACTTCGAAGAAGGGAAGTTAGAG TTAACACGCAGGCCCCGGTCGAACTTCTACCGGCGCCGCGCAGGGAAAGC ATAACTAACGGTGCGTCTTCCGAGCCTTCTCCGACGTGCCCGGCTGTTGC CGAAGAAATGGACGTCTTCATTGGTGACGGCATCGCAAACGGGACAGCGG GTGACGGCAACGTGGGCGAAGGCGCAAATCCGGGCATCAACGGCGACATT GACGGCGGCAGCAGCAATGGCCGCCCGACCTACTGCTACAGTTTAGCCGA GCTCCTGGCGCTTCGGCCGCCAGACGCCCCTGGCATTGACCGCTCCGGCA GCAGCGACGGAACCACCGACGGCTCCACCATGCAGCTCCGACTGTCGGGA ATAAACGGCCGCATCGTGCTACGCGCCGGCGAGGCCGTGACGCGGCAGAG CAGCCGCGATGGGTGGGATAGCAGCAAGCATGGTGGCGGTGGCGGTGGCG GCGGTGGAGGCAGCGGGAAGAGCGGCGGCGGCGGTGGTCGTGGTGGCGAT GGAGGTGGGAAGGGCGGCGGCGGCGGCGGGCGTCGCGGCGGCGGAGGAGG CGGAGGATGGCGCAAGCCGGTCGACACGGCTCCGGCGCTTGAGGATTGCG AGCCGCTTACCATCAACGAGGAGACGCGTTGGAAGCCCAGCAATGTCTTG AAGAAGGCCGAAGCTGCCGCCGCCGCATACGCTGCCTCCCCCGCTGACGG CGGCGGCGGCTCGTCTTCTGCCTCCGCTGCCGCGGCTCCGGCTGCCGTGC TGGCCACCGCGCCGGCGATGGGCGCCGAGGCCCGCGCGCTGGTGCTGCGG CGGGCACGCGGCATCCTCAACAAGATGACACTGGAGAAGTTCGAACTGCT CAGCGGCGAGTTTCTGACCAACGTGAGCGCGCAGAATCAGGAGACGGTAA GCGAGGTAGTTGCGGCAGTGGTCACCAAGGCGCAGATGGAGCGGCACTTC TCGAGCATGTACGCGGAGCTATGCCTCCGGCTAGCGCGGTCGCCGATGCC GGGGCTGGACGCCGACAGCGCCAAGGGCGCCAAGAAGTTCCGCAAGATGC TGCTAGAGAGCTGCCAGCTCGAGTTCGAGCGGGACGGTGAGAAGAGAAGG CATCCCTTTCTTTCACTCTTTGTCTCGCGTTTCGTCCTTGTTTCCGGTTG GACTCCTGTTTCAATTCTCTCCGTCCACTACCTATTTGTTAGAAGCCGTA GTTGGTGTAGCCTTCAGTTTGCTTACAGACGTTTTCACCAGCACCAGTTT CCCGCCAATTGCCAACTTGTGTGCTGCGCATCCTTTGCACTACTTACGTC CCTGACTGATCCTCCAAAGTACTCGCCGTTCGCTCTCGAACTGCCGTCAC AGTTGGTGCCGAGCTCCAGGCCGTTAAGGTGTGTGCCGGCAAGTGGCAGT TTCGTTTGTAACTGCCGGCAGTTTCAGAGAGATCCTTTTTTGCAGTGTCA AGATCTTTTCGACAGGCAGGGATGCATTGCACCTCCTTTTCTTGCTTAAA TCTAGACTCCGTACAAGGCAGTGTCTTCAATTGAGATCGAGTACATGTGA TATGTCTTACCTAATCTTTCCTCTTTCTTTGGTTGAGCGGGTCCTGCAGT GCTGCTGGAATGACGATAACTTTTCGACGCTACCCCGCGCGGGGATGAGC GATCGAACGACTACAATTCCCCGACCAGCGTTTTTCATTTCATGGCTCCC TTCGTGTCCTCCCTGCTGTCACTTGTGCTTGCCTTGCGCCTTGCCGACCT GCCGGCTGCCTTCTCTTGCTGGCCGATCCCGATATCACGGCGGCCGTTTC TCTCACCATCTGTCTCCCTTTCTCTTATCATCCTTCTCCTTCCCTCCGAC ACGCCTCATCTCTCACCTGTCGCAGGAGAACGGGAGCCTGGACGCAGACG AGCGCACCGAGATGGAGCTGAAGATCCGGCAGCGCTACACGGGCCACATG CGCTTCATCGGAGAGCTCTACAAGGCCGAGCTGCTGCGGGTGAAGCACGT CTGCGCCGCCCTCGACACGCTCTGGGAGGGCGGCACAGCCGGGGGGACCG GGGCCGAGTCGGAGCTGGACGAGGAGCGGCTGGAGTGCTACATTCGCCTC ATGACCACCGTGGGCAAGACCATGGAGAGCACAACCCAGGTTGGTTGTTT TGTATGTGACCTACGTTTTATGGATCCCTTTTGCTTGTCGTCAATTCGGC TTTGTTTTTTGTATGAGGCGTTCCGATGCATCTGTTTCTGGAGTACCGGC ATCCCACTTGTGGGCTGTTACCTTGCCATACGTCGCATTATGAACGCTTG AATTGCGCTTCTTACGGCGTGTTCGACTCCACTTCTGTTTTCTGCCGGTC ACCTGTCGCCTTTGGCTTTTGTTCTACCTGGTCCGGGGACCGCACCACCG CGAGGCAGGACAAGGACACGGTCAAGGTGGTGAAGCGGCACTTCGAGCAG ATCAAGAAGCTGAGCGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6433:3..3020-

>mRNA_P-wetherbeei_contig6433.1.2 ID=mRNA_P-wetherbeei_contig6433.1.2|Name=mRNA_P-wetherbeei_contig6433.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1533bp|location=Sequence derived from alignment at P-wetherbeei_contig6433:3..3020- (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGACAGCGCACCTGAACCCAGAGGCTCCGGCGTGGGTGCCAAAAGA
GCCCATACCACTGGCCAGAGCCGCCGATGCGGGTGCGGCGAAAGACGCCG
TGATCACTTTTGGTGATGTCGACACTGCGCCTGCAACCTGGGAAAGCATA
ACTAACGGTGCGTCTTCCGAGCCTTCTCCGACGTGCCCGGCTGTTGCCGA
AGAAATGGACGTCTTCATTGGTGACGGCATCGCAAACGGGACAGCGGGTG
ACGGCAACGTGGGCGAAGGCGCAAATCCGGGCATCAACGGCGACATTGAC
GGCGGCAGCAGCAATGGCCGCCCGACCTACTGCTACAGTTTAGCCGAGCT
CCTGGCGCTTCGGCCGCCAGACGCCCCTGGCATTGACCGCTCCGGCAGCA
GCGACGGAACCACCGACGGCTCCACCATGCAGCTCCGACTGTCGGGAATA
AACGGCCGCATCGTGCTACGCGCCGGCGAGGCCGTGACGCGGCAGAGCAG
CCGCGATGGGTGGGATAGCAGCAAGCATGGTGGCGGTGGCGGTGGCGGCG
GTGGAGGCAGCGGGAAGAGCGGCGGCGGCGGTGGTCGTGGTGGCGATGGA
GGTGGGAAGGGCGGCGGCGGCGGCGGGCGTCGCGGCGGCGGAGGAGGCGG
AGGATGGCGCAAGCCGGTCGACACGGCTCCGGCGCTTGAGGATTGCGAGC
CGCTTACCATCAACGAGGAGACGCGTTGGAAGCCCAGCAATGTCTTGAAG
AAGGCCGAAGCTGCCGCCGCCGCATACGCTGCCTCCCCCGCTGACGGCGG
CGGCGGCTCGTCTTCTGCCTCCGCTGCCGCGGCTCCGGCTGCCGTGCTGG
CCACCGCGCCGGCGATGGGCGCCGAGGCCCGCGCGCTGGTGCTGCGGCGG
GCACGCGGCATCCTCAACAAGATGACACTGGAGAAGTTCGAACTGCTCAG
CGGCGAGTTTCTGACCAACGTGAGCGCGCAGAATCAGGAGACGGTAAGCG
AGGTAGTTGCGGCAGTGGTCACCAAGGCGCAGATGGAGCGGCACTTCTCG
AGCATGTACGCGGAGCTATGCCTCCGGCTAGCGCGGTCGCCGATGCCGGG
GCTGGACGCCGACAGCGCCAAGGGCGCCAAGAAGTTCCGCAAGATGCTGC
TAGAGAGCTGCCAGCTCGAGTTCGAGCGGGACGTTGGTGCCGAGCTCCAG
GCCGTTAAGGAGAACGGGAGCCTGGACGCAGACGAGCGCACCGAGATGGA
GCTGAAGATCCGGCAGCGCTACACGGGCCACATGCGCTTCATCGGAGAGC
TCTACAAGGCCGAGCTGCTGCGGGTGAAGCACGTCTGCGCCGCCCTCGAC
ACGCTCTGGGAGGGCGGCACAGCCGGGGGGACCGGGGCCGAGTCGGAGCT
GGACGAGGAGCGGCTGGAGTGCTACATTCGCCTCATGACCACCGTGGGCA
AGACCATGGAGAGCACAACCCAGGACAAGGACACGGTCAAGGTGGTGAAG
CGGCACTTCGAGCAGATCAAGAAGCTGAGCGAG
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