mRNA_P-wetherbeei_contig6416.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6416.1.1
Unique NamemRNA_P-wetherbeei_contig6416.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6416.1.1 vs. uniprot
Match: A0A7R9Z1Z8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z1Z8_9STRA)

HSP 1 Score: 114 bits (285), Expect = 2.790e-29
Identity = 53/100 (53.00%), Postives = 73/100 (73.00%), Query Frame = 1
Query:    7 CTGPLQRLENMEFAFVFKEPVDPVKLGLPDYFDIVKKPMDLGTIRRYLDSGRYHTLEDFEGDVNLVFDNAILYNGKKTEVGEVADNMKKVFAGEWAAMKR 306
            C   L+ L+  +  +VF  PVDPV+LGLPDYF ++K+PMDLGTIR+ L++G Y +LE+FE DV+L FDNA+LYN + + V  +AD MK  F G++ AM R
Sbjct:   85 CLEVLKVLQGHQHGWVFNSPVDPVELGLPDYFQVIKRPMDLGTIRKRLENGCYRSLEEFEADVHLTFDNAMLYNPEGSVVYNMADEMKSKFGGDYDAMIR 184          
BLAST of mRNA_P-wetherbeei_contig6416.1.1 vs. uniprot
Match: A0A7S2W4U4_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W4U4_9STRA)

HSP 1 Score: 112 bits (279), Expect = 1.300e-26
Identity = 49/102 (48.04%), Postives = 73/102 (71.57%), Query Frame = 1
Query:    1 QYCTGPLQRLENMEFAFVFKEPVDPVKLGLPDYFDIVKKPMDLGTIRRYLDSGRYHTLEDFEGDVNLVFDNAILYNGKKTEVGEVADNMKKVFAGEWAAMKR 306
            Q CT  L+RL + ++ ++F +PV+PV L +PDYFD+VK PMDL TI++ L++  Y  +++F  DV L FDNAILYNGK ++V EVA  +KK F  +W  +++
Sbjct:   21 QKCTPVLKRLMDSDYGWIFNQPVNPVDLKIPDYFDVVKNPMDLSTIKKRLENNVYRDIKEFPADVRLTFDNAILYNGKTSDVTEVAKTLKKRFDADWKKVQQ 122          
BLAST of mRNA_P-wetherbeei_contig6416.1.1 vs. uniprot
Match: A0A7S4RN78_9STRA (Histone acetyltransferase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RN78_9STRA)

HSP 1 Score: 111 bits (277), Expect = 3.350e-26
Identity = 44/103 (42.72%), Postives = 77/103 (74.76%), Query Frame = 1
Query:    7 CTGPLQRLENMEFAFVFKEPVDPVKLGLPDYFDIVKKPMDLGTIRRYLDSGRYHTLEDFEGDVNLVFDNAILYNGKKTEVGEVADNMKKVFAGEWAAMKRVVQ 315
            C   +++L + ++ ++FK+PVDP++LGLPDYF++V+ PMDLG + + L++G Y  L+  E D+ LVF+NAILYNG+ ++VGE+A ++  +F  EW ++ + ++
Sbjct:  521 CIPVVKKLMSDQYGWIFKDPVDPIELGLPDYFEVVQNPMDLGLVEKNLENGEYKDLDGVESDIRLVFENAILYNGENSDVGEMAKSLLNLFVREWKSVLKGIK 623          
BLAST of mRNA_P-wetherbeei_contig6416.1.1 vs. uniprot
Match: A0A6V2HFN8_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2HFN8_9STRA)

HSP 1 Score: 110 bits (276), Expect = 4.020e-26
Identity = 44/98 (44.90%), Postives = 74/98 (75.51%), Query Frame = 1
Query:    7 CTGPLQRLENMEFAFVFKEPVDPVKLGLPDYFDIVKKPMDLGTIRRYLDSGRYHTLEDFEGDVNLVFDNAILYNGKKTEVGEVADNMKKVFAGEWAAM 300
            C   +++L + ++ ++FK+PVDP++LGLPDYF++V+ PMDLG + + L++G Y  L+  E D+ LVF+NAILYNG+ ++VGE+A ++  +F  EW ++
Sbjct:  521 CIPVVKKLMSDQYGWIFKDPVDPIELGLPDYFEVVQNPMDLGLVEKNLENGEYKDLDGVESDIRLVFENAILYNGENSDVGEMAKSLLNLFVREWKSV 618          
BLAST of mRNA_P-wetherbeei_contig6416.1.1 vs. uniprot
Match: A0A448Z5Q0_9STRA (Histone acetyltransferase n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448Z5Q0_9STRA)

HSP 1 Score: 110 bits (276), Expect = 4.590e-26
Identity = 52/106 (49.06%), Postives = 76/106 (71.70%), Query Frame = 1
Query:    7 CTGPLQRLENMEFAFVFKEPVDPVKLGLPDYFDIVKKPMDLGTIRRYLDSGRYHTLEDFEGDVNLVFDNAILYNGKKTEVGEVADNMKKVFAGEWAAMKRVVQQVR 324
            C   L+ L+  E  +VF  PVDPV+L L DYF+I+K PMDLG+I++ L+ G YH ++DF+ DVNL FDNAILYNGK T V ++A  +KK F  +++   ++V+Q++
Sbjct:  757 CLEVLKGLQTHEHGWVFNSPVDPVELNLTDYFEIIKNPMDLGSIQKKLEKGEYHAIKDFQSDVNLSFDNAILYNGKGTVVYDMAKELKKKFEVDYS---KLVEQLK 859          
BLAST of mRNA_P-wetherbeei_contig6416.1.1 vs. uniprot
Match: A0A7S1YS89_9STRA (Histone acetyltransferase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1YS89_9STRA)

HSP 1 Score: 109 bits (272), Expect = 1.570e-25
Identity = 50/100 (50.00%), Postives = 71/100 (71.00%), Query Frame = 1
Query:    7 CTGPLQRLENMEFAFVFKEPVDPVKLGLPDYFDIVKKPMDLGTIRRYLDSGRYHTLEDFEGDVNLVFDNAILYNGKKTEVGEVADNMKKVFAGEWAAMKR 306
            C   L+ L++ +  +VF  PVDPV+LGLPDYF ++K+PMDLGTI++ L++G YH L  F+GDVNL FDNA+LYN K + V  +A  +K  FA ++  + R
Sbjct:  201 CLKVLKGLQSHQHGWVFNSPVDPVELGLPDYFQVIKRPMDLGTIKKRLENGSYHELNGFKGDVNLTFDNAMLYNPKGSVVWNMAKELKDKFAVDFENLVR 300          
BLAST of mRNA_P-wetherbeei_contig6416.1.1 vs. uniprot
Match: A0A7S2R3Z8_9STRA (Histone acetyltransferase n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2R3Z8_9STRA)

HSP 1 Score: 108 bits (271), Expect = 2.170e-25
Identity = 49/91 (53.85%), Postives = 68/91 (74.73%), Query Frame = 1
Query:    7 CTGPLQRLENMEFAFVFKEPVDPVKLGLPDYFDIVKKPMDLGTIRRYLDSGRYHTLEDFEGDVNLVFDNAILYNGKKTEVGEVADNMKKVF 279
            C   L+ L+  + ++VF  PVDPV+LGLPDYF ++K+PMDLGTI++ L++G YH LEDFEGD +L FDNA+LYN + + V  +A+ MK  F
Sbjct:  448 CLEVLKVLQGHQHSWVFNSPVDPVELGLPDYFQVIKRPMDLGTIKKRLENGCYHLLEDFEGDAHLTFDNAMLYNPEGSVVYNMAEEMKAQF 538          
BLAST of mRNA_P-wetherbeei_contig6416.1.1 vs. uniprot
Match: B8LBX3_THAPS (Histone acetyltransferase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8LBX3_THAPS)

HSP 1 Score: 107 bits (267), Expect = 7.540e-25
Identity = 49/104 (47.12%), Postives = 71/104 (68.27%), Query Frame = 1
Query:    7 CTGPLQRLENMEFAFVFKEPVDPVKLGLPDYFDIVKKPMDLGTIRRYLDSGRYHTLEDFEGDVNLVFDNAILYNGKKTEVGEVADNMKKVFAGEWAAMKRVVQQ 318
            C   L+ L+  E  +VF  PVDPV+LGL DYFD++KKPMDLGTI R LD+G YH  +DF+ DV L F+NA+ YN + + V E+A  +KK F  ++  + + +++
Sbjct:  835 CVEILRELQIHEHGWVFATPVDPVELGLDDYFDVIKKPMDLGTISRRLDNGSYHAFDDFKSDVRLTFENAMKYNDENSVVHEMAKELKKKFDTDYKKLMKQLEK 938          
BLAST of mRNA_P-wetherbeei_contig6416.1.1 vs. uniprot
Match: A0A7R9Z1X3_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z1X3_9STRA)

HSP 1 Score: 106 bits (265), Expect = 1.300e-24
Identity = 53/96 (55.21%), Postives = 69/96 (71.88%), Query Frame = 1
Query:   19 LQRLENMEFAFVFKEPVDPVKLGLPDYFDIVKKPMDLGTIRRYLDSGRYHTLEDFEGDVNLVFDNAILYNGKKTEVGEVADNMKKVFAGEW-AAMK 303
            +++L N E  +VF  PVDPV+LGLPDYF+I+K PMDLGT+   L SG Y  +E  E DV LVF+N+ILYNG+ ++VGE+A  M   F  E+ AAMK
Sbjct:  551 VRKLINDECGWVFSTPVDPVELGLPDYFEIIKNPMDLGTVESNLQSGSYDDVEKLERDVKLVFENSILYNGEGSDVGEMAKQMMDKFTAEYEAAMK 646          
BLAST of mRNA_P-wetherbeei_contig6416.1.1 vs. uniprot
Match: A0A7S2UKV4_9STRA (Histone acetyltransferase (Fragment) n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UKV4_9STRA)

HSP 1 Score: 106 bits (264), Expect = 1.860e-24
Identity = 50/105 (47.62%), Postives = 76/105 (72.38%), Query Frame = 1
Query:    7 CTGPLQRLENMEFAFVFKEPVDPVKLGLPDYFDIVKKPMDLGTIRRYLDSGRYHTLEDFEGDVNLVFDNAILYNGKKTEVGEVADNMKKVFAGEWAAMKRVVQQV 321
            C   ++ L++ +  +VF  PVDPV+LGLPDYF+++K+PMDLGTI++ L++G YH L+DFEGDV + FDNA+LYN + + V  +A  MK  F  ++   K +V+Q+
Sbjct:  659 CLEVMRILQSHQHGWVFNSPVDPVELGLPDYFEVIKRPMDLGTIKKRLENGCYHALDDFEGDVCMTFDNAMLYNPEGSVVFNMAKEMKIKFEVDF---KELVKQL 760          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6416.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7R9Z1Z8_9STRA2.790e-2953.00Hypothetical protein (Fragment) n=1 Tax=Pseudictyo... [more]
A0A7S2W4U4_9STRA1.300e-2648.04Histone acetyltransferase (Fragment) n=1 Tax=Rhizo... [more]
A0A7S4RN78_9STRA3.350e-2642.72Histone acetyltransferase n=2 Tax=Ditylum brightwe... [more]
A0A6V2HFN8_9STRA4.020e-2644.90Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A448Z5Q0_9STRA4.590e-2649.06Histone acetyltransferase n=1 Tax=Pseudo-nitzschia... [more]
A0A7S1YS89_9STRA1.570e-2550.00Histone acetyltransferase n=1 Tax=Ditylum brightwe... [more]
A0A7S2R3Z8_9STRA2.170e-2553.85Histone acetyltransferase n=1 Tax=Eucampia antarct... [more]
B8LBX3_THAPS7.540e-2547.12Histone acetyltransferase n=1 Tax=Thalassiosira ps... [more]
A0A7R9Z1X3_9STRA1.300e-2455.21Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S2UKV4_9STRA1.860e-2447.62Histone acetyltransferase (Fragment) n=1 Tax=Atthe... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6416contigP-wetherbeei_contig6416:571..894 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog35128.Thaps24331
PFAMsBromodomain,HAT_KAT11,ZZ,zf-TAZ
Model size324
Max annot lvl2836|Bacillariophyta
KEGG koko:K04498
KEGG Pathwayko04024,ko04066,ko04068,ko04110,ko04310,ko04330,ko04350,ko04520,ko04630,ko04720,ko04916,ko04919,ko04922,ko05016,ko05152,ko05161,ko05164,ko05165,ko05166,ko05167,ko05168,ko05169,ko05200,ko05203,ko05206,ko05211,ko05215,map04024,map04066,map04068,map04110,map04310,map04330,map04350,map04520,map04630,map04720,map04916,map04919,map04922,map05016,map05152,map05161,map05164,map05165,map05166,map05167,map05168,map05169,map05200,map05203,map05206,map05211,map05215
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.24e-25
EggNOG OGsCOG5076@1|root,KOG1474@2759|Eukaryota,KOG1778@2759|Eukaryota,2XENY@2836|Bacillariophyta
EC2.3.1.48
DescriptionTAZ zinc finger, present in p300 and CBP
Cds size324
COG categoryK
BRITEko00000,ko00001,ko01000,ko03000,ko03029,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186912.0926628-CDS-P-wetherbeei_contig6416:570..8941683186912.0926628-CDS-P-wetherbeei_contig6416:570..894Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6416 571..894 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6416.1.1prot_P-wetherbeei_contig6416.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6416 571..894 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6416.1.1

>prot_P-wetherbeei_contig6416.1.1 ID=prot_P-wetherbeei_contig6416.1.1|Name=mRNA_P-wetherbeei_contig6416.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=108bp
QYCTGPLQRLENMEFAFVFKEPVDPVKLGLPDYFDIVKKPMDLGTIRRYL
DSGRYHTLEDFEGDVNLVFDNAILYNGKKTEVGEVADNMKKVFAGEWAAM
KRVVQQVR
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mRNA from alignment at P-wetherbeei_contig6416:571..894-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6416.1.1 ID=mRNA_P-wetherbeei_contig6416.1.1|Name=mRNA_P-wetherbeei_contig6416.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=324bp|location=Sequence derived from alignment at P-wetherbeei_contig6416:571..894- (Phaeothamnion wetherbeei SAG_119_79)
CAGTACTGCACGGGCCCTCTGCAGCGGCTGGAGAACATGGAGTTCGCCTT CGTCTTCAAGGAGCCCGTCGACCCCGTTAAGCTTGGGCTGCCCGACTACT TCGACATCGTTAAGAAGCCTATGGACCTGGGCACGATCCGGCGGTACCTC GACAGCGGCCGCTACCACACGCTGGAGGACTTCGAGGGGGACGTCAACCT CGTGTTTGACAATGCCATCCTGTACAACGGCAAGAAGACCGAGGTCGGGG AGGTGGCGGACAACATGAAGAAGGTGTTCGCGGGGGAGTGGGCCGCCATG AAGCGCGTCGTGCAGCAGGTGCGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6416:571..894-

>mRNA_P-wetherbeei_contig6416.1.1 ID=mRNA_P-wetherbeei_contig6416.1.1|Name=mRNA_P-wetherbeei_contig6416.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=324bp|location=Sequence derived from alignment at P-wetherbeei_contig6416:571..894- (Phaeothamnion wetherbeei SAG_119_79)
CAGTACTGCACGGGCCCTCTGCAGCGGCTGGAGAACATGGAGTTCGCCTT
CGTCTTCAAGGAGCCCGTCGACCCCGTTAAGCTTGGGCTGCCCGACTACT
TCGACATCGTTAAGAAGCCTATGGACCTGGGCACGATCCGGCGGTACCTC
GACAGCGGCCGCTACCACACGCTGGAGGACTTCGAGGGGGACGTCAACCT
CGTGTTTGACAATGCCATCCTGTACAACGGCAAGAAGACCGAGGTCGGGG
AGGTGGCGGACAACATGAAGAAGGTGTTCGCGGGGGAGTGGGCCGCCATG
AAGCGCGTCGTGCAGCAGGTGCGA
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