mRNA_P-wetherbeei_contig6412.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6412.1.1 vs. uniprot
Match: F0YDU7_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDU7_AURAN) HSP 1 Score: 233 bits (595), Expect = 3.300e-73 Identity = 132/228 (57.89%), Postives = 163/228 (71.49%), Query Frame = 2
Query: 254 MAAAEPNNTIYIHNLNEKIKKPVLKKSLHSIFSQFGRIIDIVACRGEKLRGQAWVVFEDKAAATNAVKQMQGFPFYDKPMRIEFSKNESDVIARRRGTFVPREKRQKTEAAKGPKGPQQLGQEPAGAPPATSMGAAPT-AVGGPGGPLAAPNSVLFAENLPAECTQGMLNLLFQQYRGLREVRMAAGQGGRGVAFVEFEDATLAGLALQGLAGFKLTQTDALQLSYAK 934
MA+ +PN T+YI+NLNEKIKK LKKS++S+FSQFG+I+D+V CRG KLRGQAWVVF D AATNA++QMQGFPF+DKPMRI F+K +SDV+++ G+FV REKR K EA P APPAT AP A A P++VLFA++LP +C ML++LFQQY G +EVRM G+ +G+AFVEF D T A LALQGL FKLT TD L LS+AK
Sbjct: 1 MASVQPNQTVYINNLNEKIKKDALKKSIYSVFSQFGKILDVVCCRGLKLRGQAWVVFADVGAATNALRQMQGFPFFDKPMRIAFAKAKSDVVSKADGSFVAREKR-KREAP------------PPKAPPATEALEAPKPAKAAKADKNATPSNVLFAQDLPDDCNDMMLSILFQQYGGFKEVRMVPGK--KGIAFVEFADETQASLALQGLDNFKLTPTDTLALSFAK 213
BLAST of mRNA_P-wetherbeei_contig6412.1.1 vs. uniprot
Match: A0A7S2UV81_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UV81_9STRA) HSP 1 Score: 228 bits (582), Expect = 2.340e-71 Identity = 132/224 (58.93%), Postives = 156/224 (69.64%), Query Frame = 2
Query: 272 NNTIYIHNLNEKIKKPVLKKSLHSIFSQFGRIIDIVACRGEKLRGQAWVVFEDKAAATNAVKQMQGFPFYDKPMRIEFSKNESDVIARRRGTFVPREKRQKTEAAKGPKGPQQLGQEPAGAPPATSMGAAP----TAVGGPGGPLAAPNSVLFAENLPAECTQGMLNLLFQQYRGLREVRMAAGQGGRGVAFVEFEDATLAGLALQGLAGFKLTQTDALQLSYA 931
N TIYI+NLNEKIKK VLKKSLHSIFSQFG+II I ACRG KLRGQAWVVF+DKA+ATNA++QMQGFPFY+KPMRI FSK +SDV+A+R GT+ R++ K P PA AP A + +AP TA G P PN +LFAE LP +C + +L +LF+QY G EVRM G+ G +AFVEFED AG A+ GL GFKLT D L LSYA
Sbjct: 2 NETIYINNLNEKIKKEVLKKSLHSIFSQFGKIIQITACRGIKLRGQAWVVFQDKASATNALRQMQGFPFYEKPMRIAFSKTKSDVVAKRDGTYTKRKR----------KAP------PAPAPDAPAQPSAPFAQTTAAAGKNNP---PNRILFAEGLPDDCNEMVLGMLFKQYIGFSEVRMVPGKSG--IAFVEFEDEMQAGYAMTGLNGFKLTPNDTLSLSYA 204
BLAST of mRNA_P-wetherbeei_contig6412.1.1 vs. uniprot
Match: A0A6V1NUL1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1NUL1_HETAK) HSP 1 Score: 227 bits (578), Expect = 2.340e-70 Identity = 133/232 (57.33%), Postives = 164/232 (70.69%), Query Frame = 2
Query: 266 EPNNTIYIHNLNEKIKKPVLKKSLHSIFSQFGRIIDIVACRGEKLRGQAWVVFEDKAAATNAVKQMQGFPFYDKPMRIEFSKNESDVIARRRGTFVPREKRQKTEAAKGP-------KGPQQLGQEPAGAPPATSMGAAPTAVGGPGGPLAA--PNSVLFAENLPAECTQGMLNLLFQQYRGLREVRMAAGQGGRGVAFVEFEDATLAGLALQGLAGFKLTQTDALQLSYAK 934
+P TIYI+NLNEKIKK VLKKSLHSIFSQFG+II+IVACRG KLRGQAWV F D AAATNA++QMQGFPFY+KPMRI F+KN+SD + +R G + P +KR+K E + + QEP PA + A TAV P+ A P+ +LFA+NLP +C + ML++LFQQY G +EVRM G+ +G+AF+EF D AG ALQGL GFKLT D LQLSYA+
Sbjct: 7 KPLETIYINNLNEKIKKDVLKKSLHSIFSQFGKIIEIVACRGLKLRGQAWVCFADTAAATNALRQMQGFPFYEKPMRIAFAKNKSDKVLKREGVYDPAKKRRKMEXXXXXXXXXXXXESVAAMEQEPT---PAAVVQPAFTAVQQVEQPVPANVPHRILFAQNLPDDCNEMMLDMLFQQYNGYKEVRMVPGK--KGLAFIEFGDEMQAGYALQGLNGFKLTPQDLLQLSYAR 233
BLAST of mRNA_P-wetherbeei_contig6412.1.1 vs. uniprot
Match: A0A8J2X4I1_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2X4I1_9STRA) HSP 1 Score: 225 bits (573), Expect = 7.440e-70 Identity = 131/238 (55.04%), Postives = 159/238 (66.81%), Query Frame = 2
Query: 254 MAAAEPNNTIYIHNLNEKIKKPVLKKSLHSIFSQFGRIIDIVACRGEKLRGQAWVVFEDKAAATNAVKQMQGFPFYDKPMRIEFSKNESDVIARRRGTFVPREKRQKTEAAKGPKGPQQLGQEPAGAPPATSMGAAPTAVGGPGGPLAAPNSVLFA-----------ENLPAECTQGMLNLLFQQYRGLREVRMAAGQGGRGVAFVEFEDATLAGLALQGLAGFKLTQTDALQLSYAK 934
MAA EPN T+YI+NLNEKIKK LKKS++S+FSQFG+I+D+V CRG KLRGQAWVVF D AATNA++QMQGFPFYDKPMRI F+K++SD+IA+R GTF PREKR++ ++P A PA + A+ PG A P V NLP +C+ ML +LFQQY G +EVRM G +G+AFVEF D T A LA QGL GFKLT TDAL L +AK
Sbjct: 1 MAAIEPNQTVYINNLNEKIKKDALKKSIYSVFSQFGKILDVVCCRGLKLRGQAWVVFADVGAATNALRQMQGFPFYDKPMRIAFAKSKSDMIAKRDGTFKPREKRKR--------------EDPKPAAPAAAK-----ALPAPGD--APPPKVXXXXXXXXXXXXXXSNLPEDCSDMMLGILFQQYAGFKEVRMVPGN--KGIAFVEFADETQASLARQGLDGFKLTPTDALSLVFAK 215
BLAST of mRNA_P-wetherbeei_contig6412.1.1 vs. uniprot
Match: A0A7S2DHN7_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DHN7_9STRA) HSP 1 Score: 221 bits (562), Expect = 6.480e-68 Identity = 125/229 (54.59%), Postives = 160/229 (69.87%), Query Frame = 2
Query: 251 EMAAAEPNNTIYIHNLNEKIKKPVLKKSLHSIFSQFGRIIDIVACRGEKLRGQAWVVFEDKAAATNAVKQMQGFPFYDKPMRIEFSKNESDVIARRRGTFVPREKRQKTEAAKGPKGPQQLGQEPAGAPPATSMGAAPTAVGGPGGPL-AAPNSVLFAENLPAECTQGMLNLLFQQYRGLREVRMAAGQGGRGVAFVEFEDATLAGLALQGLAGFKLTQTDALQLSYAK 934
EMA P+ TIYI+NLNEKIKK L+K+L+S+FSQFG+I++IVACRG KLRGQAW+ FE AAT+A+ +MQGFPFYDKPM+I FSK +SD +A+R GTFV REKR++ E A + EP + S + PT L A P+S+LFA+NLP +C ML++LF+ Y G +EVRM G+ +G+AF+EF D AG ALQGL GFKLT T L LS+AK
Sbjct: 15 EMADISPSQTIYINNLNEKIKKQPLRKALYSVFSQFGKIVEIVACRGLKLRGQAWICFETVEAATHAMAKMQGFPFYDKPMKIAFSKTKSDCVAKRDGTFVAREKRKREEKAP------RAESEPTAMDTSASKISTPTPQILQAADLNATPSSILFAQNLPEDCNDMMLSMLFKTYAGFKEVRMVPGK--KGLAFIEFTDEVSAGSALQGLHGFKLTPTQTLALSFAK 235
BLAST of mRNA_P-wetherbeei_contig6412.1.1 vs. uniprot
Match: A0A7S3NJ60_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NJ60_9STRA) HSP 1 Score: 219 bits (557), Expect = 2.070e-67 Identity = 124/233 (53.22%), Postives = 160/233 (68.67%), Query Frame = 2
Query: 251 EMAAAEPNNTIYIHNLNEKIKKPVLKKSLHSIFSQFGRIIDIVACRGEKLRGQAWVVFEDKAAATNAVKQMQGFPFYDKPMRIEFSKNESDVIARRRGTFVPREKRQKTEAAKGPKGPQQLGQEPAGAPPATSMGAAPTA-----VGGPGGPLAAPNSVLFAENLPAECTQGMLNLLFQQYRGLREVRMAAGQGGRGVAFVEFEDATLAGLALQGLAGFKLTQTDALQLSYAK 934
E A + N T+YI+NLNEKIKK VLKK+L+S+FSQFG+I+D+V CRG +LRGQAW+ F D AAT+A+++MQGFPFYDKPMRI F+K++SD+IA+ GTFV REKR++ +PPA + AA A + P L P++VLFA+NLP EC Q ML +LFQQY G +EVRM G+ +G+AF+EF D A LAL GL GF L+ T AL LS+AK
Sbjct: 5 EDVALQVNQTLYINNLNEKIKKQVLKKALYSLFSQFGKILDLVCCRGIRLRGQAWICFADIGAATSAMQKMQGFPFYDKPMRIAFAKSKSDIIAKADGTFVSREKRKRE------------------SPPAANTDAAHQAPQKKQLPTPPTNLTPPSNVLFAQNLPDECNQNMLVILFQQYTGYKEVRMVPGK--KGIAFIEFADDVQASLALAGLNGFSLSPTHALNLSFAK 217
BLAST of mRNA_P-wetherbeei_contig6412.1.1 vs. uniprot
Match: A0A812Y221_SYMMI (Snrpb2 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812Y221_SYMMI) HSP 1 Score: 211 bits (538), Expect = 1.570e-64 Identity = 110/222 (49.55%), Postives = 158/222 (71.17%), Query Frame = 2
Query: 269 PNNTIYIHNLNEKIKKPVLKKSLHSIFSQFGRIIDIVACRGEKLRGQAWVVFEDKAAATNAVKQMQGFPFYDKPMRIEFSKNESDVIARRRGTFVPREKRQKTEAAKGPKGPQQLGQEPAGAPPATSMGAAPTAVGGPGGPLAAPNSVLFAENLPAECTQGMLNLLFQQYRGLREVRMAAGQGGRGVAFVEFEDATLAGLALQGLAGFKLTQTDALQLSYAK 934
P+ T+YI+N+NEKIKK VLKK+L+++FSQ+G++I+IVAC+G +LRGQAW+V++D ++ATNA++++QGF FYDKP+RI F+K +SD++A++ GTF PR+KR + E + + APP P A P+ +LFA+NLP EC ML LFQQY G +EVRMA G+ +G+AF+EF+D AG+ALQ L+GF+L+ D LQL+Y K
Sbjct: 5 PSQTLYINNINEKIKKDVLKKTLYALFSQYGKVIEIVACKGIRLRGQAWIVYQDTSSATNAMRRLQGFNFYDKPLRISFAKTKSDIVAKKDGTFNPRQKRVREEQSSA------MEDGARAAPPPAQYKEPPVAKTPKPIVNNVPHRILFAQNLPDECNDQMLAALFQQYPGFQEVRMAPGK--KGIAFIEFQDVVQAGIALQQLSGFQLSAADTLQLTYGK 218
BLAST of mRNA_P-wetherbeei_contig6412.1.1 vs. uniprot
Match: D7FNU9_ECTSI (RNA binding / nucleic acid binding n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNU9_ECTSI) HSP 1 Score: 211 bits (538), Expect = 4.440e-64 Identity = 126/251 (50.20%), Postives = 163/251 (64.94%), Query Frame = 2
Query: 272 NNTIYIHNLNEKIKKPVLKKSLHSIFSQFGRIIDIVACRGEKLRGQAWVVFEDKAAATNAVKQMQGFPFYDKPMRIEFSKNESDVIARRRGTFVPREKRQKTEA-AKGPKGPQQLGQEPAGAPPATSMGAAPT----------------------------AVGGPGGPLA-APNSVLFAENLPAECTQGMLNLLFQQYRGLREVRMAAGQGGRGVAFVEFEDATLAGLALQGLAGFKLTQTDALQLSYAK 934
N+TIY+ NLNEKIKKP+LKKSLHS+FSQFG+I+DIVACRG KL+GQAWVVF +K+ ATNA++QMQGFPF++K MRI+F+K+ESDV+ ++ GT+VPR+KR+ A A G Q PA AT+ GA AV P GP+ P+++L+A LP E TQ ML+ LF+QY G E RMA G G AF+EF D AG+AL L GFKL+ T+ LQL++A+
Sbjct: 8 NHTIYVSNLNEKIKKPLLKKSLHSVFSQFGKIVDIVACRGLKLKGQAWVVFAEKSMATNALRQMQGFPFFEKKMRIQFAKSESDVVTKKAGTYVPRDKRKLPSADASNGNGLHQAAPAPA----ATTPGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVPQPAGPIGDVPHNILYATGLPPEITQVMLSKLFEQYPGFSEARMAPG----GQAFIEFADQMQAGIALNALNGFKLSATNPLQLAFAR 250
BLAST of mRNA_P-wetherbeei_contig6412.1.1 vs. uniprot
Match: A0A176VE80_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VE80_MARPO) HSP 1 Score: 211 bits (536), Expect = 5.920e-64 Identity = 118/238 (49.58%), Postives = 157/238 (65.97%), Query Frame = 2
Query: 257 AAAEPNNTIYIHNLNEKIKKPVLKKSLHSIFSQFGRIIDIVACRGEKLRGQAWVVFEDKAAATNAVKQMQGFPFYDKPMRIEFSKNESDVIARRRGTFVPREKRQKTEAAKGPKGPQQLGQEPAGAPPATSMGAAPTAVGGPGGPLAA------------PNSVLFAENLPAECTQGMLNLLFQQYRGLREVRMAAGQGGRGVAFVEFEDATLAGLALQGLAGFKLTQTDALQLSYAK 934
A PN TIYI+NLNEKIKK LKKSL+++FSQFG+I+DIVAC+ KLRGQAWVVF+D AATNA++QMQGFPFYDKPMRI+++K++SD +++ GTFV REKR+K + K + + PA PPA++ PN++LFA+NLP E M+ +LFQQ+ G +EVRM + G +AF+EF D A +ALQ L FK+T T+ +Q+SYAK
Sbjct: 3 ADTPPNQTIYINNLNEKIKKEELKKSLYAVFSQFGKILDIVACKTLKLRGQAWVVFDDVTAATNALRQMQGFPFYDKPMRIQYAKSKSDAVSKADGTFVSREKRKKNDEKAERKRREHQAEAPAAGPPASAYXXXXXXXXXXXXXXXXXXXXXXXXXXXPPNNILFAQNLPREANNLMIEMLFQQFPGFKEVRMIEAKPG--IAFIEFGDEMQASVALQALHNFKITPTNPMQISYAK 238
BLAST of mRNA_P-wetherbeei_contig6412.1.1 vs. uniprot
Match: A0A1D1YL34_9ARAE (U2 small nuclear ribonucleoprotein B n=2 Tax=Araceae TaxID=4454 RepID=A0A1D1YL34_9ARAE) HSP 1 Score: 210 bits (534), Expect = 9.800e-64 Identity = 121/227 (53.30%), Postives = 154/227 (67.84%), Query Frame = 2
Query: 269 PNNTIYIHNLNEKIKKPVLKKSLHSIFSQFGRIIDIVACRGEKLRGQAWVVFEDKAAATNAVKQMQGFPFYDKPMRIEFSKNESDVIARRRGTFVPREKRQKTEAAKGPKGPQQLGQEPAGA---PPATSMGAAPTAVGGPGGPLAA--PNSVLFAENLPAECTQGMLNLLFQQYRGLREVRMAAGQGGRGVAFVEFEDATLAGLALQGLAGFKLTQTDALQLSYAK 934
PN TIYI NLNEK+KK LK+SL+++FSQ+GRI+DIVA + EKLRGQAWVVF + AA+ AV+QMQ FPFYDKPMRI+++K +SD IA+ GT+ PREKR+K E + Q A P A S GA+ G P AA PN++LF +NLP E T ML +LFQQY G REVRM + G +AFVEFED A +A+Q L GFK+T + + ++YAK
Sbjct: 8 PNKTIYIKNLNEKVKKEELKRSLYALFSQYGRILDIVALKTEKLRGQAWVVFSEVTAASAAVRQMQNFPFYDKPMRIQYAKTKSDCIAKEEGTYTPREKRKKQEXXXXXXXXXEDAQRSGAASNGPSAQSNGASQAFHGKPSAQDAANAPNNILFIQNLPYETTSMMLQILFQQYPGFREVRMIEAKPG--IAFVEFEDDVQASIAMQSLQGFKITPQNPMAIAYAK 232 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6412.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6412.1.1 >prot_P-wetherbeei_contig6412.1.1 ID=prot_P-wetherbeei_contig6412.1.1|Name=mRNA_P-wetherbeei_contig6412.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=228bp MAAAEPNNTIYIHNLNEKIKKPVLKKSLHSIFSQFGRIIDIVACRGEKLRback to top mRNA from alignment at P-wetherbeei_contig6412:884..2779+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6412.1.1 ID=mRNA_P-wetherbeei_contig6412.1.1|Name=mRNA_P-wetherbeei_contig6412.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1896bp|location=Sequence derived from alignment at P-wetherbeei_contig6412:884..2779+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6412:884..2779+ >mRNA_P-wetherbeei_contig6412.1.1 ID=mRNA_P-wetherbeei_contig6412.1.1|Name=mRNA_P-wetherbeei_contig6412.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=684bp|location=Sequence derived from alignment at P-wetherbeei_contig6412:884..2779+ (Phaeothamnion wetherbeei SAG_119_79)back to top |