mRNA_P-wetherbeei_contig641.3.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig641.3.3 vs. uniprot
Match: A0A835YM08_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM08_9STRA) HSP 1 Score: 286 bits (732), Expect = 2.640e-92 Identity = 155/266 (58.27%), Postives = 189/266 (71.05%), Query Frame = 1
Query: 1 GKCALVTGGSAGIGRAIVEEFAQLGATVLTCARNTESIEAALNEWHSMGLLNIHAMKADISDAVDREALLTKAGDLFDGKLDILVNNVGTNIRKSTVDYSEEEFQQARKEQFFEFIPLFRVMSVNFNGFYLLTRAAHALLK-ASGDASVVNVSSVAGLIAIKSGSPYAASKAAMNHTTAYLGCEWAPDGVRVNAVAPWYTRTPLAAPVFEDEEKLAEIVNRTPMGRTAEPEEVSGVVAFLCMPGASYITGEVVSIDGGFTKNGWMT 795
G+ ALVTGG+ GIG AIV E A LGA V TCAR+ ++ L EW + GL +H AD+S A DR ALL K G+ F G LDILVNNVGT+IR++TVDY+ EE + V+ VNF+ + + + H LLK A G SVVN+ SVAG+ +IKSG+PYAASKAAM+ T CEWA DG+RVN VAPWYT TPLA+PVFED+ K AEI++RTPM R AE EEVS +VAFLCM GASYITG+VV +DGGFT+NGW+T
Sbjct: 9 GQKALVTGGTKGIGNAIVVELAHLGAEVYTCARSDADLQQCLAEWRAQGL-KVHGSVADVSSAEDRAALLQKVGEAFGGSLDILVNNVGTSIRRATVDYTSEEAEH--------------VLRVNFHSCFAMMQLCHPLLKEAQGGGSVVNIGSVAGVTSIKSGTPYAASKAAMHKVTQNCACEWAGDGIRVNCVAPWYTNTPLASPVFEDKIKYAEILSRTPMKRIAEAEEVSALVAFLCMRGASYITGQVVCVDGGFTQNGWIT 259
BLAST of mRNA_P-wetherbeei_contig641.3.3 vs. uniprot
Match: D7FL76_ECTSI (Tropinone reductase, putative / tropine dehydrogenase, putative n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL76_ECTSI) HSP 1 Score: 284 bits (727), Expect = 7.090e-91 Identity = 157/274 (57.30%), Postives = 188/274 (68.61%), Query Frame = 1
Query: 1 GKCALVTGGSAGIGRAIVEEFAQLGATVLTCARNTESIEAALNEWHSMGLLNIHAMKADISDAVDREALLTKAGDLFDGKLDILVNNVGTNIRKSTVDYSEEEFQQARKEQFFEFIPLFRVMSVNFNGFYLLTRAAHALLKAS---------GDASVVNVSSVAGLIAIKSGSPYAASKAAMNHTTAYLGCEWAPDGVRVNAVAPWYTRTPLAAPVFEDEEKLAEIVNRTPMGRTAEPEEVSGVVAFLCMPGASYITGEVVSIDGGFTKNGWMT 795
GK A+VTGG+ GIG+AIVEE A LGA V+TC+RN + A L EW S GLL + AD++ A RE+L+ A + F G LDILVNNVGTNIRK+TVDY+ EE L VM NF +LLT+ H LLKA+ G +SV+N+SSVAG+ IKSGSPYAASKAAMN T GCEWAPDG+RVNAVAPWYT+TPL PV D ++ EI RTPM R A+ +EVSG+VAFLCM GA YIT +V++ DGGFT NGWMT
Sbjct: 49 GKTAVVTGGTKGIGKAIVEELACLGAKVITCSRNPADVAACLEEWKSKGLL-VEGTAADVTTAEGRESLVKLAEEHFGGLLDILVNNVGTNIRKATVDYTPEE--------------LAYVMDTNFTSLFLLTKLLHPLLKAAAAVKGSRENGGSSVINISSVAGITPIKSGSPYAASKAAMNQVTRLWGCEWAPDGIRVNAVAPWYTKTPLTEPVQADPVRVNEITQRTPMKRWADADEVSGMVAFLCMKGAGYITSQVIATDGGFTANGWMT 307
BLAST of mRNA_P-wetherbeei_contig641.3.3 vs. uniprot
Match: A0A087G546_ARAAL (Uncharacterized protein n=2 Tax=Arabis TaxID=50451 RepID=A0A087G546_ARAAL) HSP 1 Score: 260 bits (664), Expect = 5.200e-82 Identity = 137/263 (52.09%), Postives = 180/263 (68.44%), Query Frame = 1
Query: 1 GKCALVTGGSAGIGRAIVEEFAQLGATVLTCARNTESIEAALNEWHSMGLLNIHAMKADISDAVDREALLTKAGDLFDGKLDILVNNVGTNIRKSTVDYSEEEFQQARKEQFFEFIPLFRVMSVNFNGFYLLTRAAHALLKASGDASVVNVSSVAGLIAIKSGSPYAASKAAMNHTTAYLGCEWAPDGVRVNAVAPWYTRTPLAAPVFEDEEKLAEIVNRTPMGRTAEPEEVSGVVAFLCMPGASYITGEVVSIDGGFTKNGW 789
GK ALVTGG+ GIGRA+VEE A+ GA V TC+RN E ++A L +W S GL+ ++ D S RE L+ + +F GKL+ILVNNVGTNIRK TVDYS EE+ ++MS N + L++ AH LLKASG SVV +SSVAGL+ +++GS Y A+K A+N T L CEWA D +R N VAPWY +T L P+ E ++ + +V+RTP+GR EPEEVS +VAFLC+P +SYITG+V+S+DGGFT NG+
Sbjct: 11 GKTALVTGGTRGIGRAVVEELARFGAKVYTCSRNEEELKACLADWKSNGLV-VYGSVCDASVKDQREQLMQEVSAMFSGKLNILVNNVGTNIRKPTVDYSSEEYA--------------KIMSTNLESAFHLSQLAHPLLKASGVGSVVFISSVAGLVHVRTGSIYGATKGALNQLTRNLACEWAGDNIRTNCVAPWYIKTSLVEPLLEKKDFVEAVVSRTPLGRVGEPEEVSSLVAFLCLPASSYITGQVISVDGGFTVNGF 258
BLAST of mRNA_P-wetherbeei_contig641.3.3 vs. uniprot
Match: A0A4D8ZQC0_SALSN (Tropinone reductase I n=2 Tax=Salvia TaxID=21880 RepID=A0A4D8ZQC0_SALSN) HSP 1 Score: 258 bits (659), Expect = 2.950e-81 Identity = 139/261 (53.26%), Postives = 173/261 (66.28%), Query Frame = 1
Query: 1 GKCALVTGGSAGIGRAIVEEFAQLGATVLTCARNTESIEAALNEWHSMGLLNIHAMKADISDAVDREALLTKAGDLFDGKLDILVNNVGTNIRKSTVDYSEEEFQQARKEQFFEFIPLFRVMSVNFNGFYLLTRAAHALLKASGDASVVNVSSVAGLIAIKSGSPYAASKAAMNHTTAYLGCEWAPDGVRVNAVAPWYTRTPLAAPVFEDEEKLAEIVNRTPMGRTAEPEEVSGVVAFLCMPGASYITGEVVSIDGGFTKN 783
G ALVTGG+ GIG A VEE A++GATV TC+RN E + L EW S G N+ D S R L+ K LF GKL+ILVNNVGTNIRK TVDY+ EE+ +M+ NF+ Y L + AH LLKASG S+V +SSVAGL+ + SGS Y A+K AMN T L CEWA D +RVN+VAPWY +T L + E+EE L ++V+RTP+ R EP+EVS +VAFLC+P ASYITG++VS+DGGFT N
Sbjct: 13 GMTALVTGGTRGIGFATVEEMAEMGATVYTCSRNEEELNQRLQEWSSKGF-NVSGSVCDASSREQRSQLMDKVSSLFSGKLNILVNNVGTNIRKPTVDYTAEEYSS--------------IMTTNFDSAYHLCQVAHPLLKASGKGSIVFISSVAGLVHLYSGSVYGATKGAMNQLTKNLACEWAKDNIRVNSVAPWYIKTSLVKHLLENEEFLDKVVSRTPLKRPGEPQEVSSLVAFLCLPAASYITGQIVSVDGGFTVN 258
BLAST of mRNA_P-wetherbeei_contig641.3.3 vs. uniprot
Match: A0A3S3QA70_9MAGN (Tropinone reductase-like protein isoform X1 n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3QA70_9MAGN) HSP 1 Score: 258 bits (658), Expect = 6.580e-81 Identity = 131/263 (49.81%), Postives = 177/263 (67.30%), Query Frame = 1
Query: 1 GKCALVTGGSAGIGRAIVEEFAQLGATVLTCARNTESIEAALNEWHSMGLLNIHAMKADISDAVDREALLTKAGDLFDGKLDILVNNVGTNIRKSTVDYSEEEFQQARKEQFFEFIPLFRVMSVNFNGFYLLTRAAHALLKASGDASVVNVSSVAGLIAIKSGSPYAASKAAMNHTTAYLGCEWAPDGVRVNAVAPWYTRTPLAAPVFEDEEKLAEIVNRTPMGRTAEPEEVSGVVAFLCMPGASYITGEVVSIDGGFTKNGW 789
G ALVTGG+ GIG A+VEE A++GA + TC+RN ++ L +W +G + D+S RE L+ K +F GKL+IL+NNVGTNIRK T+DY++E+F RVM+ NF Y L + AH LLKASG S+V++SSV G++AI+SG+ YAA+K AMN T L CEWA D +R N VAPWY +T L +FED++ E+++RTP+ R EP+EVS +VAFLC+P ASYITG+V+S+DGG T NG+
Sbjct: 24 GATALVTGGTRGIGNAVVEELAEMGACIHTCSRNETELDRCLQQWEGLGF-RVTGSVCDLSSRPQREQLMEKVSSIFGGKLNILINNVGTNIRKPTIDYTDEDFT--------------RVMTTNFESAYHLVQLAHPLLKASGMGSIVSISSVGGVVAIRSGTIYAATKGAMNQLTKNLACEWAKDNIRANCVAPWYIKTSLVEHMFEDKQFTEEVISRTPLRRIGEPKEVSSLVAFLCLPAASYITGQVISVDGGMTVNGF 271
BLAST of mRNA_P-wetherbeei_contig641.3.3 vs. uniprot
Match: TRNHF_ARATH (Tropinone reductase homolog At5g06060 n=9 Tax=Brassicaceae TaxID=3700 RepID=TRNHF_ARATH) HSP 1 Score: 256 bits (655), Expect = 1.260e-80 Identity = 135/263 (51.33%), Postives = 177/263 (67.30%), Query Frame = 1
Query: 1 GKCALVTGGSAGIGRAIVEEFAQLGATVLTCARNTESIEAALNEWHSMGLLNIHAMKADISDAVDREALLTKAGDLFDGKLDILVNNVGTNIRKSTVDYSEEEFQQARKEQFFEFIPLFRVMSVNFNGFYLLTRAAHALLKASGDASVVNVSSVAGLIAIKSGSPYAASKAAMNHTTAYLGCEWAPDGVRVNAVAPWYTRTPLAAPVFEDEEKLAEIVNRTPMGRTAEPEEVSGVVAFLCMPGASYITGEVVSIDGGFTKNGW 789
GK ALVTGG+ GIGRA+VEE A+ GA V TC+RN E + A LN+W + GL+ + D S RE L+ +A F GKL+IL+NNVGTN+RK TV+YS EE+ ++MS N + L++ AH LLKASG S+V +SSVAGL+ + SGS Y A+K A+N T L CEWA D +R N VAPWY +T L + E +E + +V+RTP+GR EPEEVS +VAFLC+P +SYITG+V+S+DGGFT NG+
Sbjct: 11 GKTALVTGGTRGIGRAVVEELAKFGAKVHTCSRNQEELNACLNDWKANGLV-VSGSVCDASVRDQREKLIQEASSAFSGKLNILINNVGTNVRKPTVEYSSEEYA--------------KIMSTNLESAFHLSQIAHPLLKASGVGSIVFISSVAGLVHLSSGSIYGATKGALNQLTRNLACEWASDNIRTNCVAPWYIKTSLVETLLEKKEFVEAVVSRTPLGRVGEPEEVSSLVAFLCLPASSYITGQVISVDGGFTVNGF 258
BLAST of mRNA_P-wetherbeei_contig641.3.3 vs. uniprot
Match: A0A6J0MGR7_RAPSA (3-oxoacyl-[acyl-carrier-protein] reductase n=7 Tax=Brassiceae TaxID=981071 RepID=A0A6J0MGR7_RAPSA) HSP 1 Score: 256 bits (653), Expect = 2.370e-80 Identity = 134/263 (50.95%), Postives = 177/263 (67.30%), Query Frame = 1
Query: 1 GKCALVTGGSAGIGRAIVEEFAQLGATVLTCARNTESIEAALNEWHSMGLLNIHAMKADISDAVDREALLTKAGDLFDGKLDILVNNVGTNIRKSTVDYSEEEFQQARKEQFFEFIPLFRVMSVNFNGFYLLTRAAHALLKASGDASVVNVSSVAGLIAIKSGSPYAASKAAMNHTTAYLGCEWAPDGVRVNAVAPWYTRTPLAAPVFEDEEKLAEIVNRTPMGRTAEPEEVSGVVAFLCMPGASYITGEVVSIDGGFTKNGW 789
GK ALVTGG+ GIGRA+VEE A+ GATV TC+RN E +++ L++W S GL + D SD RE L+ + F GKL+IL+NNVGTNIRK TV+Y+ E++ ++MS+N + ++ AH LLKASG S+V +SSVAGL+ + SGS Y A+K A+N T L CEWA D +R N VAPWY +T L P+ E + +V+RTP+GR EPEEVS +VAFLC+P ASYITG+V+S+DGGFT NG+
Sbjct: 11 GKTALVTGGTRGIGRAVVEELARFGATVHTCSRNQEELKSCLDDWKSNGLA-VTGSVCDASDRDQREKLIQEVSSAFSGKLNILINNVGTNIRKPTVEYTSEDYA--------------KIMSINLESAFHFSQIAHPLLKASGVGSIVFISSVAGLVHLSSGSVYGATKGALNQLTRNLACEWAGDNIRTNCVAPWYIKTSLVKPLLEKKGFEEAVVSRTPLGRVGEPEEVSSLVAFLCLPAASYITGQVISVDGGFTVNGF 258
BLAST of mRNA_P-wetherbeei_contig641.3.3 vs. uniprot
Match: A0A0C9S3L1_9SPER (TSA: Wollemia nobilis Ref_Wollemi_Transcript_28761_1323 transcribed RNA sequence n=1 Tax=Wollemia nobilis TaxID=56998 RepID=A0A0C9S3L1_9SPER) HSP 1 Score: 254 bits (648), Expect = 1.630e-79 Identity = 136/263 (51.71%), Postives = 177/263 (67.30%), Query Frame = 1
Query: 1 GKCALVTGGSAGIGRAIVEEFAQLGATVLTCARNTESIEAALNEWHSMGLLNIHAMKADISDAVDREALLTKAGDLFDGKLDILVNNVGTNIRKSTVDYSEEEFQQARKEQFFEFIPLFRVMSVNFNGFYLLTRAAHALLKASGDASVVNVSSVAGLIAIKSGSPYAASKAAMNHTTAYLGCEWAPDGVRVNAVAPWYTRTPLAAPVFEDEEKLAEIVNRTPMGRTAEPEEVSGVVAFLCMPGASYITGEVVSIDGGFTKNGW 789
G ALVTGG+ GIG+A+VEE A GATV TCARN + + L W + GL N+ D+S RE L+ K +GKL+IL+NNVGTN R+ T++Y+ E+F F+ MS NF Y L + +H LLKASG S+V +SSVAG++AI+SG+ YAASK AMN L CEWA D +RVN+VAPWYT+TPL + EDEE + ++ RTP+ R AEP+EVS +VAFLC+P ASYITG+V+S+DGG T NG+
Sbjct: 18 GMTALVTGGTKGIGKAVVEELAGFGATVYTCARNEKDLNECLTAWKAAGL-NVEGSNCDLSLRSAREELIEKVSSFCNGKLNILINNVGTNKRRPTLEYTAEDFS------FY--------MSTNFESAYHLCQLSHPLLKASGSGSIVFISSVAGVVAIQSGTLYAASKGAMNQIAKNLACEWARDNIRVNSVAPWYTKTPLVKKLLEDEEFVKNVLERTPLDRLAEPQEVSSLVAFLCLPAASYITGQVISVDGGMTVNGF 265
BLAST of mRNA_P-wetherbeei_contig641.3.3 vs. uniprot
Match: A0A059AFL7_EUCGR (Uncharacterized protein n=9 Tax=Eucalyptus grandis TaxID=71139 RepID=A0A059AFL7_EUCGR) HSP 1 Score: 254 bits (649), Expect = 1.650e-79 Identity = 134/264 (50.76%), Postives = 175/264 (66.29%), Query Frame = 1
Query: 1 GKCALVTGGSAGIGRAIVEEFAQLGATVLTCARNTESIEAALNEWHSMGLLNIHAMKADISDAVDREALLTKAGDLFDGKLDILVNNVGTNIRKSTVDYSEEEFQQARKEQFFEFIPLFRVMSVNFNGFYLLTRAAHALLKASGDASVVNVSSVAGLIAIKSGSPYAASKAAMNHTTAYLGCEWAPDGVRVNAVAPWYTRTPLAAPVFEDEEKLAEIVNRTPMGRTAEPEEVSGVVAFLCMPGASYITGEVVSIDGGFTKNGWM 792
G ALVTGG+ GIG AIVEE A+LGATV TC+RN I L +W S G + D+S +RE L+ +FDGKL+IL+NNVGTN KST+DY+ E+F +M+ NF Y L++ AH LLKASG S+V +SSV G+++I GS Y+A+K AMN T L CEWA D +R N+VAPW+ TPLA P+ D++ E++ RTP+GRT EPEEVS +VAFLC+P ASYITG+ + +DGGFT NG++
Sbjct: 27 GMTALVTGGTKGIGHAIVEELARLGATVHTCSRNEAEINECLKDWKSKGF-RVSGSTCDVSSRSEREKLMLTVSSVFDGKLNILINNVGTNTLKSTMDYTAEDFSF--------------IMTTNFESAYHLSQLAHPLLKASGAGSIVFLSSVCGVVSINVGSIYSATKGAMNQLTKNLACEWAKDNIRSNSVAPWFILTPLAEPLLSDKKFHEEVIARTPLGRTGEPEEVSSLVAFLCLPAASYITGQTICVDGGFTVNGFL 275
BLAST of mRNA_P-wetherbeei_contig641.3.3 vs. uniprot
Match: V4LL57_EUTSA (Uncharacterized protein n=6 Tax=Brassicaceae TaxID=3700 RepID=V4LL57_EUTSA) HSP 1 Score: 253 bits (647), Expect = 1.900e-79 Identity = 134/263 (50.95%), Postives = 177/263 (67.30%), Query Frame = 1
Query: 1 GKCALVTGGSAGIGRAIVEEFAQLGATVLTCARNTESIEAALNEWHSMGLLNIHAMKADISDAVDREALLTKAGDLFDGKLDILVNNVGTNIRKSTVDYSEEEFQQARKEQFFEFIPLFRVMSVNFNGFYLLTRAAHALLKASGDASVVNVSSVAGLIAIKSGSPYAASKAAMNHTTAYLGCEWAPDGVRVNAVAPWYTRTPLAAPVFEDEEKLAEIVNRTPMGRTAEPEEVSGVVAFLCMPGASYITGEVVSIDGGFTKNGW 789
GK ALVTGG+ GIGRAIVEE A+ GATV TC+RN E ++A L+ W S GL+ + D S RE L+ + F GKL+IL+NNVGTNIRK TV+YS EE+ ++MS N + ++ AH LLK+SG S+V +SSVAGL+ ++SGS Y A+K A+N T L CEWA D +R N VAPWY +T L P+ E ++ + +V+RTP+GR EPEEV+ +VAFLC+P ASYITG+V+S+DGG T NG+
Sbjct: 11 GKTALVTGGTRGIGRAIVEELARFGATVHTCSRNQEELKACLDVWKSNGLV-VSGSVCDASVRDQREKLIQEVSSAFSGKLNILINNVGTNIRKPTVEYSSEEYA--------------KIMSTNLESAFHFSQIAHPLLKSSGVGSIVFISSVAGLVHLRSGSIYGATKGALNQLTRNLACEWAGDNIRTNCVAPWYIKTSLVEPLLEKKDFVEAVVSRTPLGRVGEPEEVASLVAFLCLPAASYITGQVISVDGGLTVNGF 258 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig641.3.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig641.3.3 >prot_P-wetherbeei_contig641.3.3 ID=prot_P-wetherbeei_contig641.3.3|Name=mRNA_P-wetherbeei_contig641.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=219bp MGLLNIHAMKADISDAVDREALLTKAGDLFDGKLDILVNNVGTNIRKSTVback to top mRNA from alignment at P-wetherbeei_contig641:3324..5358+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig641.3.3 ID=mRNA_P-wetherbeei_contig641.3.3|Name=mRNA_P-wetherbeei_contig641.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2035bp|location=Sequence derived from alignment at P-wetherbeei_contig641:3324..5358+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig641:3324..5358+ >mRNA_P-wetherbeei_contig641.3.3 ID=mRNA_P-wetherbeei_contig641.3.3|Name=mRNA_P-wetherbeei_contig641.3.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=657bp|location=Sequence derived from alignment at P-wetherbeei_contig641:3324..5358+ (Phaeothamnion wetherbeei SAG_119_79)back to top |