mRNA_P-wetherbeei_contig641.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig641.1.1
Unique NamemRNA_P-wetherbeei_contig641.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig641.1.1 vs. uniprot
Match: A0A6V3DJ58_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V3DJ58_HETAK)

HSP 1 Score: 148 bits (373), Expect = 1.630e-39
Identity = 75/134 (55.97%), Postives = 94/134 (70.15%), Query Frame = 1
Query:    1 FYLALVLAVGMHEVASNCMYVSQMAFFARVSDPVIGGTYMTLLNTVANLGTKWPGTLSLWAMDAVTWKSCIGADFDDTADGAAAIT------CLEAGGACEVVLDGYNVQAALCVAVGIAWLAIFRGRVLRLQE 384
            FY AL+LAV +HEVA+N MYV+QMAFF+++SDP IGGTYMTLLNT+ANLGTKWP + SL+ MD++T K CI  +  +  DG  ++       C EAGG+C VV DGY +Q ALC A G+ WL       L LQE
Sbjct:  381 FYAALLLAVILHEVAANMMYVAQMAFFSKISDPAIGGTYMTLLNTIANLGTKWPNSASLYFMDSLTQKECIDDEGTELFDGITSVCMPASTECTEAGGSCVVVADGYYIQVALCTAAGLLWLLALGNATLALQE 514          
BLAST of mRNA_P-wetherbeei_contig641.1.1 vs. uniprot
Match: A0A0C9RY59_AMBAM (Putative acetyl-coenzyme a transporter n=1 Tax=Amblyomma americanum TaxID=6943 RepID=A0A0C9RY59_AMBAM)

HSP 1 Score: 131 bits (329), Expect = 2.480e-35
Identity = 64/136 (47.06%), Postives = 85/136 (62.50%), Query Frame = 1
Query:    1 FYLALVLAVGMHEVASNCMYVSQMAFFARVSDPVIGGTYMTLLNTVANLGTKWPGTLSLWAMDAVTWKSCIGAD--FDDTADGAAAITCLEAGGACEVVLDGYNVQAALCVAVGIAWLAIFRGRVLRLQEASLLAW 402
            +Y  +VL   +H+V   C++VS MAFFARVSDP IGGTYMTLLNT+ NLG  WP T +LW +D++T+KSC+GA   +   +      TC   GG C+  +DGYN++  LC+ +G  WL   R R   LQ     AW
Sbjct:  112 YYAVIVLVYAVHQVTVYCIFVSLMAFFARVSDPAIGGTYMTLLNTICNLGGNWPATTALWMVDSLTFKSCVGASQGWPLCSSKEDLETCTSQGGTCKTYIDGYNIEMVLCILLGFLWLLYARRRAHWLQSLPQSAW 247          
BLAST of mRNA_P-wetherbeei_contig641.1.1 vs. uniprot
Match: A0A836C8C4_9STRA (Acetyl-coenzyme A transporter 1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8C4_9STRA)

HSP 1 Score: 135 bits (341), Expect = 3.230e-35
Identity = 77/146 (52.74%), Postives = 91/146 (62.33%), Query Frame = 1
Query:    1 FYLALVLAVGMHEVASNCMYVSQMAFFARVSDPVIGGTYMTLLNTVANLGTKWPGTLSLWAMDAVTWKSC--IGADFDDTADGAA----------AITCLEAGGACEVVLDGYNVQAALCVAVGIAWLAIFRGRVLRLQEASLLAW 402
            FY AL  AV +HEVASN MYVS MAFFARVSDP IGGTYMTLLNTV+NLGTKWP +LSL+ MD++T + C  +G       DG A          +  C + GG C VV DGYNVQ   CV  G+ WL +    V++LQ      W
Sbjct:  322 FYAALGGAVVLHEVASNFMYVSMMAFFARVSDPAIGGTYMTLLNTVSNLGTKWPNSLSLYLMDSLTERRCFPLGETGGTVLDGGAFDALCTAHETSEACAKLGGHCVVVRDGYNVQVQACVVAGVVWLVLCWRAVVKLQGLKQSEW 467          
BLAST of mRNA_P-wetherbeei_contig641.1.1 vs. uniprot
Match: UPI001F5FE717 (acetyl-coenzyme A transporter 1 n=2 Tax=Schistocerca TaxID=7008 RepID=UPI001F5FE717)

HSP 1 Score: 135 bits (341), Expect = 5.100e-35
Identity = 64/134 (47.76%), Postives = 92/134 (68.66%), Query Frame = 1
Query:    1 FYLALVLAVGMHEVASNCMYVSQMAFFARVSDPVIGGTYMTLLNTVANLGTKWPGTLSLWAMDAVTWKSCIGADFDDTADGAAAITCLEAGGACEVVLDGYNVQAALCVAVGIAWLAIFRGRVLRLQEASLLAW 402
            +Y+ +++  G+H+VA   M+V+ MAFFAR+SDP +GGTYMTLLNTVANLG  WP T++LW +D +T+K+C  A  ++ +  +    C+  GG+CE VLDGY V++A+CV +G  WL   + RV  LQ     AW
Sbjct:  377 YYVMVIIVYGLHQVALYSMFVAVMAFFARISDPAVGGTYMTLLNTVANLGGNWPATVALWFVDGLTYKACSMAQDNNCSSESEKQACISQGGSCETVLDGYYVESAVCVVIGFLWLLWGKKRVNYLQSRGDNAW 510          
BLAST of mRNA_P-wetherbeei_contig641.1.1 vs. uniprot
Match: H2SQF2_TAKRU (Solute carrier family 33 member 1 n=5 Tax=Takifugu TaxID=31032 RepID=H2SQF2_TAKRU)

HSP 1 Score: 136 bits (342), Expect = 6.700e-35
Identity = 67/134 (50.00%), Postives = 92/134 (68.66%), Query Frame = 1
Query:    1 FYLALVLAVGMHEVASNCMYVSQMAFFARVSDPVIGGTYMTLLNTVANLGTKWPGTLSLWAMDAVTWKSCIGADFDDTADGAAAITCLEAGGACEVVLDGYNVQAALCVAVGIAWLAIFRGRVLRLQEASLLAW 402
            +Y+ ++L+  +H+VA   MYV+ MAF A+VSDP+IGGTYMTLLNTV NLG  WP T++LW +D +T K C GA   + +  AAA  C++AGGAC   LDGY V++ +CV +G+ W      R+ +LQE S  AW
Sbjct:  445 YYVTILLSYSVHQVALYSMYVACMAFHAKVSDPLIGGTYMTLLNTVTNLGGNWPSTVALWVVDPLTLKGCQGAVEQNCSSAAAAELCVDAGGACVTTLDGYYVESVVCVVIGLLWWLWLGKRMKQLQERSPDAW 578          
BLAST of mRNA_P-wetherbeei_contig641.1.1 vs. uniprot
Match: A0A4Y7NK05_9CRUS (EOG090X04K8 n=1 Tax=Scapholeberis mucronata TaxID=202097 RepID=A0A4Y7NK05_9CRUS)

HSP 1 Score: 135 bits (339), Expect = 7.530e-35
Identity = 65/134 (48.51%), Postives = 88/134 (65.67%), Query Frame = 1
Query:    1 FYLALVLAVGMHEVASNCMYVSQMAFFARVSDPVIGGTYMTLLNTVANLGTKWPGTLSLWAMDAVTWKSCIGADFDDTADGAAAITCLEAGGACEVVLDGYNVQAALCVAVGIAWLAIFRGRVLRLQEASLLAW 402
            +YL +V+   +H+V    M+V+ MAFFA+VSDP +GGTYMTLLNTV NLG  WP TL+LW++DA+TWKSC  AD +   D A    C + GG C V LDG+ V++ +C+ +G  WL   R  +  LQ  +  AW
Sbjct:  357 YYLLVVIIYAVHQVTVYSMFVAVMAFFAKVSDPAVGGTYMTLLNTVCNLGGNWPSTLALWSVDALTWKSCSIADDNQCRDSAETQACTDKGGQCIVELDGFYVESLVCIVIGFLWLRWGRRVIHNLQSKNESAW 490          
BLAST of mRNA_P-wetherbeei_contig641.1.1 vs. uniprot
Match: F6Z7F4_XENTR (Solute carrier family 33 (acetyl-CoA transporter), member 1 n=3 Tax=Xenopus TaxID=8353 RepID=F6Z7F4_XENTR)

HSP 1 Score: 135 bits (339), Expect = 1.200e-34
Identity = 63/134 (47.01%), Postives = 91/134 (67.91%), Query Frame = 1
Query:    1 FYLALVLAVGMHEVASNCMYVSQMAFFARVSDPVIGGTYMTLLNTVANLGTKWPGTLSLWAMDAVTWKSCIGADFDDTADGAAAITCLEAGGACEVVLDGYNVQAALCVAVGIAWLAIFRGRVLRLQEASLLAW 402
            +YL L+L+  +H++A   M+V+ MAF A+VSDP+IGGTYMTLLNTV+NLG  WP T++LW +D +T K C+GAD     D   A  C+++GG C  ++DGY V++ +CV VG  W   F  R+ +LQ+    +W
Sbjct:  397 YYLVLLLSYALHQIALYSMFVAIMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPATVALWMVDPLTSKECVGADGHSCVDHDVAELCIKSGGTCVTLIDGYYVESIVCVVVGFCWWFFFGPRLKKLQDEGQSSW 530          
BLAST of mRNA_P-wetherbeei_contig641.1.1 vs. uniprot
Match: A0A3Q2XWA4_HIPCM (Solute carrier family 33 member 1 n=1 Tax=Hippocampus comes TaxID=109280 RepID=A0A3Q2XWA4_HIPCM)

HSP 1 Score: 134 bits (338), Expect = 1.960e-34
Identity = 67/134 (50.00%), Postives = 89/134 (66.42%), Query Frame = 1
Query:    1 FYLALVLAVGMHEVASNCMYVSQMAFFARVSDPVIGGTYMTLLNTVANLGTKWPGTLSLWAMDAVTWKSCIGADFDDTADGAAAITCLEAGGACEVVLDGYNVQAALCVAVGIAWLAIFRGRVLRLQEASLLAW 402
            +Y  ++L+  +H+VA   MYV+ MAF A+VSDP+IGGTYMTLLNTV NLG  WP TL+LW +D++TWK C GA     A   A   C++ GGAC   LDGY V++ +CV +G AW      ++ +LQE S  AW
Sbjct:  414 YYGVVLLSYAVHQVALYSMYVAGMAFNAKVSDPLIGGTYMTLLNTVTNLGGNWPSTLALWLVDSLTWKECQGAVGQTCASPEAVGLCVKEGGACVTTLDGYYVESVVCVLIGFAWWVWLGQKMKKLQEHSPAAW 547          
BLAST of mRNA_P-wetherbeei_contig641.1.1 vs. uniprot
Match: A0A5D6YAT6_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAT6_9STRA)

HSP 1 Score: 134 bits (337), Expect = 2.040e-34
Identity = 69/141 (48.94%), Postives = 92/141 (65.25%), Query Frame = 1
Query:    1 FYLALVLAVGMHEVASNCMYVSQMAFFARVSDPVIGGTYMTLLNTVANLGTKWPGTLSLWAMDAVTWKSCIGADFDDTADGAAAIT-------CLEAGGACEVVLDGYNVQAALCVAVGIAWLAIFRGRVLRLQEASLLAW 402
            FY  L+L   +HEVA+N MYV QMAFFAR+SDP IGGTYMT LNT+ANLGTKWP ++SL A+D +T + C+G D    A G+   +       C  AGG C +V DG+ ++ A+C+ +G+ WL  FR R+  LQ   +  W
Sbjct:  379 FYGFLLLGGALHEVAANMMYVPQMAFFARISDPSIGGTYMTFLNTIANLGTKWPNSVSLVAVDYLTTRECLGHDETILAIGSHTCSNADERAACTAAGGECLIVTDGFFLEVAICLVLGVLWLTYFRRRIAFLQNLKIDKW 519          
BLAST of mRNA_P-wetherbeei_contig641.1.1 vs. uniprot
Match: A0A8C5MN87_9ANUR (Solute carrier family 33 member 1 n=3 Tax=Leptobrachium leishanense TaxID=445787 RepID=A0A8C5MN87_9ANUR)

HSP 1 Score: 134 bits (338), Expect = 2.150e-34
Identity = 65/134 (48.51%), Postives = 91/134 (67.91%), Query Frame = 1
Query:    1 FYLALVLAVGMHEVASNCMYVSQMAFFARVSDPVIGGTYMTLLNTVANLGTKWPGTLSLWAMDAVTWKSCIGADFDDTADGAAAITCLEAGGACEVVLDGYNVQAALCVAVGIAWLAIFRGRVLRLQEASLLAW 402
            +YLAL+L+  +H+V    M+V+ MAF A+VSDP+IGGTYMTLLNTV+NLG  WP T++LW +D +T KSC+GAD    AD  AA  C+++GG+C   LDGY V++ +CV +G +W          LQ+    +W
Sbjct:  426 YYLALLLSYALHQVTLYSMFVAVMAFNAKVSDPLIGGTYMTLLNTVSNLGGNWPATVALWCVDHLTSKSCVGADNQTCADSNAAELCVKSGGSCITTLDGYYVESFICVVIGFSWWFFLGPTFKNLQDEEPSSW 559          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig641.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6V3DJ58_HETAK1.630e-3955.97Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A0C9RY59_AMBAM2.480e-3547.06Putative acetyl-coenzyme a transporter n=1 Tax=Amb... [more]
A0A836C8C4_9STRA3.230e-3552.74Acetyl-coenzyme A transporter 1-domain-containing ... [more]
UPI001F5FE7175.100e-3547.76acetyl-coenzyme A transporter 1 n=2 Tax=Schistocer... [more]
H2SQF2_TAKRU6.700e-3550.00Solute carrier family 33 member 1 n=5 Tax=Takifugu... [more]
A0A4Y7NK05_9CRUS7.530e-3548.51EOG090X04K8 n=1 Tax=Scapholeberis mucronata TaxID=... [more]
F6Z7F4_XENTR1.200e-3447.01Solute carrier family 33 (acetyl-CoA transporter),... [more]
A0A3Q2XWA4_HIPCM1.960e-3450.00Solute carrier family 33 member 1 n=1 Tax=Hippocam... [more]
A0A5D6YAT6_9STRA2.040e-3448.94Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A8C5MN87_9ANUR2.150e-3448.51Solute carrier family 33 member 1 n=3 Tax=Leptobra... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig641contigP-wetherbeei_contig641:33..626 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog31033.ENSTRUP00000014639
Preferred nameSLC33A1
PFAMsAcatn
Model size402
Max annot lvl33208|Metazoa
KEGG koko:K03372
KEGG TC2.A.1.25
KEGG Pathwayko00604,ko01100,map00604,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0000295,GO:0003674,GO:0005215,GO:0005346,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0005794,GO:0005886,GO:0005887,GO:0006355,GO:0006357,GO:0006810,GO:0006811,GO:0006812,GO:0006820,GO:0006862,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007178,GO:0007275,GO:0007399,GO:0007417,GO:0008150,GO:0008324,GO:0008509,GO:0008514,GO:0008521,GO:0009719,GO:0009889,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0012505,GO:0015075,GO:0015077,GO:0015078,GO:0015215,GO:0015216,GO:0015291,GO:0015293,GO:0015294,GO:0015295,GO:0015318,GO:0015605,GO:0015672,GO:0015711,GO:0015748,GO:0015865,GO:0015868,GO:0015876,GO:0015916,GO:0015931,GO:0015932,GO:0016020,GO:0016021,GO:0019219,GO:0019222,GO:0022804,GO:0022857,GO:0022890,GO:0023052,GO:0030509,GO:0031090,GO:0031224,GO:0031226,GO:0031323,GO:0031326,GO:0031984,GO:0032501,GO:0032502,GO:0034220,GO:0042175,GO:0042221,GO:0042886,GO:0042887,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044459,GO:0044464,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051179,GO:0051181,GO:0051182,GO:0051184,GO:0051185,GO:0051234,GO:0051252,GO:0051503,GO:0051716,GO:0055085,GO:0060255,GO:0060395,GO:0065007,GO:0070848,GO:0070887,GO:0071077,GO:0071106,GO:0071310,GO:0071363,GO:0071495,GO:0071702,GO:0071705,GO:0071772,GO:0071773,GO:0071944,GO:0072348,GO:0072530,GO:0080090,GO:0098588,GO:0098655,GO:0098656,GO:0098660,GO:0098662,GO:0098791,GO:0098827,GO:1901264,GO:1901337,GO:1901505,GO:1901679,GO:1901682,GO:1902600,GO:1903506,GO:2000112,GO:2001141
Exons2
Evalue1.13e-33
EggNOG OGsCOG0477@1|root,KOG3574@2759|Eukaryota,38C8A@33154|Opisthokonta,3BD8W@33208|Metazoa,3CS8K@33213|Bilateria,484A9@7711|Chordata,48ZZ3@7742|Vertebrata,49YI9@7898|Actinopterygii
DescriptionSolute carrier family 33 (acetyl-CoA transporter), member 1
Cds size372
COG categoryP
BRITEko00000,ko00001,ko01000,ko02000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186911.0652373-UTR-P-wetherbeei_contig641:32..621683186911.0652373-UTR-P-wetherbeei_contig641:32..62Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig641 33..62 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186911.0812726-CDS-P-wetherbeei_contig641:62..2871683186911.0812726-CDS-P-wetherbeei_contig641:62..287Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig641 63..287 +
1683186911.0912156-CDS-P-wetherbeei_contig641:479..6261683186911.0912156-CDS-P-wetherbeei_contig641:479..626Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig641 480..626 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig641.1.1prot_P-wetherbeei_contig641.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig641 63..626 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig641.1.1

>prot_P-wetherbeei_contig641.1.1 ID=prot_P-wetherbeei_contig641.1.1|Name=mRNA_P-wetherbeei_contig641.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=124bp
MHEVASNCMYVSQMAFFARVSDPVIGGTYMTLLNTVANLGTKWPGTLSLW
AMDAVTWKSCIGADFDDTADGAAAITCLEAGGACEVVLDGYNVQAALCVA
VGIAWLAIFRGRVLRLQEASLLAW
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mRNA from alignment at P-wetherbeei_contig641:33..626+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig641.1.1 ID=mRNA_P-wetherbeei_contig641.1.1|Name=mRNA_P-wetherbeei_contig641.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=594bp|location=Sequence derived from alignment at P-wetherbeei_contig641:33..626+ (Phaeothamnion wetherbeei SAG_119_79)
TTTTACTTGGCGCTCGTCTTGGCGGTCGGCATGCATGAAGTTGCCAGCAA TTGCATGTACGTCAGCCAGATGGCCTTCTTCGCGCGCGTCAGCGACCCGG TCATCGGCGGCACCTACATGACTCTGCTGAACACGGTGGCCAACCTCGGC ACCAAGTGGCCCGGCACACTCTCGCTCTGGGCGATGGACGCTGTCACTTG GAAAAGCTGCATCGGCGCCGACTTTGACGACACCGCGGACGGCGCCGCCG CCATCGTCATGGCCGGCGCTGCGGGCGATGGTGGTGGGGCGGCGGCCGGC GCGAGCTCGCTGGGAGCCGGTTCCGCGGCTGCGGGAGGTCTGTCGGTGGC GGCGTGGGCGTGGGGCTGGCTGCCATCTTTCATCTTCGGCAGAGGCGTTG GCGGCGGCGGCGGCTGGACGCCGTGCGACACGTCGGCGGACACCGAGACG TGCTTGGAGGCCGGCGGCGCCTGCGAGGTGGTGCTGGACGGCTACAACGT GCAGGCAGCGCTGTGCGTCGCCGTCGGCATCGCGTGGCTGGCGATCTTCC GGGGCCGCGTGCTGCGGCTGCAGGAGGCGTCGCTCCTCGCGTGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig641:33..626+

>mRNA_P-wetherbeei_contig641.1.1 ID=mRNA_P-wetherbeei_contig641.1.1|Name=mRNA_P-wetherbeei_contig641.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=372bp|location=Sequence derived from alignment at P-wetherbeei_contig641:33..626+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCATGAAGTTGCCAGCAATTGCATGTACGTCAGCCAGATGGCCTTCTT
CGCGCGCGTCAGCGACCCGGTCATCGGCGGCACCTACATGACTCTGCTGA
ACACGGTGGCCAACCTCGGCACCAAGTGGCCCGGCACACTCTCGCTCTGG
GCGATGGACGCTGTCACTTGGAAAAGCTGCATCGGCGCCGACTTTGACGA
CACCGCGGACGGCGCCGCCGCCATCACGTGCTTGGAGGCCGGCGGCGCCT
GCGAGGTGGTGCTGGACGGCTACAACGTGCAGGCAGCGCTGTGCGTCGCC
GTCGGCATCGCGTGGCTGGCGATCTTCCGGGGCCGCGTGCTGCGGCTGCA
GGAGGCGTCGCTCCTCGCGTGG
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