mRNA_P-wetherbeei_contig6406.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6406.3.1
Unique NamemRNA_P-wetherbeei_contig6406.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6406.3.1 vs. uniprot
Match: D8LE04_ECTSI (Tubulin delta chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE04_ECTSI)

HSP 1 Score: 198 bits (503), Expect = 1.050e-56
Identity = 120/288 (41.67%), Postives = 151/288 (52.43%), Query Frame = 1
Query:    4 ASSSIVVQVGQCGNQVGSAFLQTMREHGD---------------------RGGVFR-GDVARAVLVDTEPKAVDRAVLAAQRT-------SRAVAGGTXXXXXXXXXXXXXXXXXXPAPP---------WRYDRRAVVRARNEGGAANNWAYGYAGYGPATAARAVDAVRREAERCDRLDAFLLVHSAAGGTGSGLGTFLTEELRDRFPAVTVCNALVCPYRAGEVIVQDYNCMFALAHLMDCSDAVLMFENERAGAVCSRQLNLERPTIADLNGVICGQLVAAALPS 753
            A S + VQVGQCGNQ+G++  Q + +H                       R   FR G VARAV++DTEPK + R V    R        +R  AGG                                WRYD    V    +GGAANNWAYGY  +G   +   ++ VRRE ERCDRL    ++HS AGGTGSGLGT LTE LRD  P+  + N +V  + +GEVI+Q+YN +F L+ L  CSD VL+ EN+ A AVC + L LERP+  DLN VIC  LVAA  P+
Sbjct:   36 AMSVVTVQVGQCGNQLGASLFQALHDHASQPPAHHGHTSGTESERARSACRQSFFRDGGVARAVIIDTEPKVIQRIVATRGRAEESTGAGARRAAGGRESAYGKTAQRRTNTTGDRNHSTVGGGSRGGGWRYDSGTQVCCHAQGGAANNWAYGYHAHGATFSEACLEGVRRETERCDRLTGLCILHSLAGGTGSGLGTCLTEALRDELPSAFLLNTVVGAHSSGEVILQNYNTLFTLSKLAKCSDGVLVVENDAATAVCRKLLRLERPSHTDLNEVICSSLVAALTPT 323          
BLAST of mRNA_P-wetherbeei_contig6406.3.1 vs. uniprot
Match: A0A6J2QWD6_COTGO (Tubulin delta chain n=7 Tax=Perciformes TaxID=8111 RepID=A0A6J2QWD6_COTGO)

HSP 1 Score: 166 bits (421), Expect = 2.930e-45
Identity = 104/264 (39.39%), Postives = 139/264 (52.65%), Query Frame = 1
Query:   10 SSIVVQVGQCGNQVGSAFLQTMREHGDRGG--VF-------------RGD-VARAVLVDTEPKAVDRAVLAAQRTSRAVAGGTXXXXXXXXXXXXXXXXXXPAPPWRYDRRAVVRARNEGGAANNWAYGYAGYGPATAARAVDAVRREAERCDRLDAFLLVHSAAGGTGSGLGTFLTEELRDRFPAVTVCNALVCPYRAGEVIVQDYNCMFALAHLMDCSDAVLMFENERAGAVCSRQLNLERPTIADLNGVICGQLVAAALPS 753
            S + VQ+GQCGNQVG A    +      G   VF              GD VARAVL+D EPKA+++++      SRA   G                       WRY   +    +   G+ NNWA GY  +GP    R  + +RRE ERCDRL   + + S AGGTGSG+GT++TE LRD +P   + N L  PYR GEVIVQ+YN +  LAHL   SDA+L+ EN+    +CS+ LN+++ +  D+N VI  QL     P+
Sbjct:    2 SIVTVQLGQCGNQVGHALFDVLCSDAQEGQRKVFSSSSCERFFHQTAHGDLVARAVLIDMEPKAINQSI------SRAAKSGK----------------------WRYGETSHFSQKQ--GSGNNWANGYCVHGPRHRERVEELLRREVERCDRLAGLMAIMSVAGGTGSGVGTYVTECLRDVYPKSFILNHLTWPYRTGEVIVQNYNSVLTLAHLYQLSDAILVHENDTVHRICSQLLNIKQISFGDVNSVIAHQLGGILQPA 235          
BLAST of mRNA_P-wetherbeei_contig6406.3.1 vs. uniprot
Match: A0A7S0ILB2_MICPS (Tubulin delta chain (Fragment) n=1 Tax=Micromonas pusilla TaxID=38833 RepID=A0A7S0ILB2_MICPS)

HSP 1 Score: 162 bits (411), Expect = 7.340e-45
Identity = 102/280 (36.43%), Postives = 134/280 (47.86%), Query Frame = 1
Query:    1 MASSSIVVQVGQCGNQVGSAFLQTMREH------GDRGGVFRG-----------------------DVARAVLVDTEPKAVDRAVLAAQRTSRAVAGGTXXXXXXXXXXXXXXXXXXPAPPWRYDRRAVVRARNEGGAANNWAYGYAGYGPATAARAVDAVRREAERCDRLDAFLLVHSAAGGTGSGLGTFLTEELRDRFPAVTVCNALVCPYRAGEVIVQDYNCMFALAHLMDCSDAVLMFENERAGAVCSRQLNLERPTIADLNGVICGQLVAAALPS 753
            M  S + VQ+GQCGNQVG+    T+          DR G+ R                         VARAVL+D EPK V  ++  A+RT R                            WRYD    +  ++  G+ NNWA GY  +G A     +D V +EAE CD +  F+L+ S AGGTG+GLG  + E LRD +P  T+ N  V PY +GEVIVQ YN +  L+ L+D SD V + +NE     C + L  ERPT  D+N V   QL    LP+
Sbjct:    1 MPGSVVTVQLGQCGNQVGAELFDTLSAEIDAHPPRDRAGIRRAFFREPHRDEHDADVSGASTSYMAPVARAVLIDMEPKVVQASLRRARRTGR----------------------------WRYDGDRTLAFQS--GSGNNWARGYHTHGDAVRHDVLDLVAKEAEACDHVGGFVLMQSMAGGTGAGLGARVAEALRDEYPTATLMNHCVWPYESGEVIVQAYNTLLTLSSLLDTSDGVAVVQNEELHQTCVKLLGAERPTFGDMNAVAASQLAGVLLPA 250          
BLAST of mRNA_P-wetherbeei_contig6406.3.1 vs. uniprot
Match: A0A3B4D6X3_PYGNA (Tubulin delta chain n=4 Tax=Serrasalmidae TaxID=42495 RepID=A0A3B4D6X3_PYGNA)

HSP 1 Score: 163 bits (412), Expect = 1.580e-44
Identity = 102/266 (38.35%), Postives = 137/266 (51.50%), Query Frame = 1
Query:   10 SSIVVQVGQCGNQVGSAFLQTMREHGDRGGVFRGD------------------VARAVLVDTEPKAVDRAVLAAQRTSRAVAGGTXXXXXXXXXXXXXXXXXXPAPPWRYDRRAVVRARNEGGAANNWAYGYAGYGPATAARAVDAVRREAERCDRLDAFLLVHSAAGGTGSGLGTFLTEELRDRFPAVTVCNALVCPYRAGEVIVQDYNCMFALAHLMDCSDAVLMFENERAGAVCSRQLNLERPTIADLNGVICGQLVAAALPS 753
            S + VQ+GQCGNQVG   L T+ +  D GG  RG                   VAR+VLVD EPK + +AV  A ++ +                            WRY  +A    +   G+ NNWA GY  +GP       D VRRE ERCDRL     V S AGGTGSG+GTF+T+ LRD +P   + N L  PY  GEVIVQ+YN +  L+ L   SDA+++ EN+    +CSR +N++  ++ D+N VI  QL +   P+
Sbjct:    2 SVVTVQLGQCGNQVGPELLSTLCD--DSGGAGRGPYSELSRERFFWEDSRGMLVARSVLVDMEPKVISQAVAKASKSGK----------------------------WRYWEKAHFCQKQ--GSGNNWANGYCVHGPRHEEAVEDLVRREVERCDRLSGIFAVMSVAGGTGSGVGTFITQCLRDVYPNSFIVNHLTWPYGTGEVIVQNYNSVLTLSRLYQLSDALVVHENDTVHKICSRLMNIKHISVDDINKVIAHQLGSMLQPA 235          
BLAST of mRNA_P-wetherbeei_contig6406.3.1 vs. uniprot
Match: W4GTD2_9STRA (Tubulin delta chain n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GTD2_9STRA)

HSP 1 Score: 164 bits (415), Expect = 1.760e-44
Identity = 102/268 (38.06%), Postives = 142/268 (52.99%), Query Frame = 1
Query:   10 SSIVVQVGQCGNQVGSAFLQTMR---EH---GDRGGVFRGD--------------VARAVLVDTEPKAVDRAVLAAQRTSRAVAGGTXXXXXXXXXXXXXXXXXXPAPPWRYDRRAVVRARNEGGAANNWAYGYAGYGPATAARAVDAVRREAERCDRLDAFLLVHSAAGGTGSGLGTFLTEELRDRFPAVTVCNALVCPYRAGEVIVQDYNCMFALAHLMDCSDAVLMFENERAGAVCSRQLNLERPTIADLNGVICGQLVAAALPS 753
            S + +Q+GQCGNQ+G +F   +    EH    DR   FR                 ARAVL+D EPK V++ V  A RTS  +                         PW+YD   VV  ++  G+ NNWAYGYA +G A     +D VR+E ERCD    FL + S AGGTGSGLG+F+ + LR+ +P   + N +V PYR+GEVIVQ+YN +  +A L + SD VL+ EN+ A  +C R L +  P+   +N V+   + A  +P+
Sbjct:    2 SVVTLQLGQCGNQLGLSFFDKLAHELEHFSAEDRECFFRSHDAKTIASHESNGAATARAVLIDMEPKVVNQCVGNAGRTSSGL-------------------------PWQYDDANVVCEQS--GSGNNWAYGYAVHGAACHEAVLDVVRKEVERCDYFKGFLALQSLAGGTGSGLGSFVCDSLRELYPTSYLLNTVVWPYRSGEVIVQNYNTLLTMACLSESSDGVLIVENDLADQICRRLLAIPTPSFHQMNQVLTNHIAAMLMPA 242          
BLAST of mRNA_P-wetherbeei_contig6406.3.1 vs. uniprot
Match: H3CCF0_TETNG (Tubulin delta chain n=2 Tax=Tetraodon nigroviridis TaxID=99883 RepID=H3CCF0_TETNG)

HSP 1 Score: 164 bits (414), Expect = 2.460e-44
Identity = 104/264 (39.39%), Postives = 134/264 (50.76%), Query Frame = 1
Query:   10 SSIVVQVGQCGNQVGSAFLQTM--REHGDRGGVF-------------RGD-VARAVLVDTEPKAVDRAVLAAQRTSRAVAGGTXXXXXXXXXXXXXXXXXXPAPPWRYDRRAVVRARNEGGAANNWAYGYAGYGPATAARAVDAVRREAERCDRLDAFLLVHSAAGGTGSGLGTFLTEELRDRFPAVTVCNALVCPYRAGEVIVQDYNCMFALAHLMDCSDAVLMFENERAGAVCSRQLNLERPTIADLNGVICGQLVAAALPS 753
            S + VQ+GQCGNQVG     T+    H   G VF             RG+ VARAVLVD EPK V R++  A R+ R                            WRY   +    +   G+ NNWA GY   GP       D VRRE ERC+RL   L V S AGGTGSG+GT+LT+ LRD +P   + N L  PY +GEVIVQ+YN    LAHL   SDA+L+ EN+    +C++ L ++  +  D+N V+  QL     P+
Sbjct:    2 SIVTVQLGQCGNQVGHELFDTICADAHLGPGKVFGTASRERFFHQTARGELVARAVLVDMEPKVVKRSLSRANRSGR----------------------------WRYGEASYFCQKQ--GSGNNWANGYCVLGPRHRDAVEDLVRREVERCERLSGLLAVMSVAGGTGSGVGTYLTQRLRDAYPRSFILNHLTWPYGSGEVIVQNYNSALTLAHLYQLSDAILVHENDTLHGICAQLLRIQHISFTDINRVVARQLAGVLQPA 235          
BLAST of mRNA_P-wetherbeei_contig6406.3.1 vs. uniprot
Match: A0A6G0XD18_9STRA (Tubulin delta chain n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XD18_9STRA)

HSP 1 Score: 162 bits (411), Expect = 4.290e-44
Identity = 95/265 (35.85%), Postives = 139/265 (52.45%), Query Frame = 1
Query:   10 SSIVVQVGQCGNQVGSAFLQTMREH------GDRGGVFRG-----------DVARAVLVDTEPKAVDRAVLAAQRTSRAVAGGTXXXXXXXXXXXXXXXXXXPAPPWRYDRRAVVRARNEGGAANNWAYGYAGYGPATAARAVDAVRREAERCDRLDAFLLVHSAAGGTGSGLGTFLTEELRDRFPAVTVCNALVCPYRAGEVIVQDYNCMFALAHLMDCSDAVLMFENERAGAVCSRQLNLERPTIADLNGVICGQLVAAALPS 753
            S + +Q+GQCGNQVG AF   +          D+   FR            D ARAVL+D EPK V + +        A  G T                      W+YD   V+  ++  G+ NNWAYGYA +G + A    D VR+E E+CD    F+ + S AGGTGSGLG+F+ + LR+ +P+  + N +V PYR+GEVIVQ+YN +  +A L + SD +++ EN+ A  +C R L + +P+   +N V+   + A  LP+
Sbjct:    2 SVVTLQLGQCGNQVGMAFFDKLASELKSFSQDDKECFFRSHDTKTIRAHSTDTARAVLIDMEPKVVSQCI------DHASPGAT----------------------WQYDPSNVICEQS--GSGNNWAYGYAVHGSSCAESVTDIVRKEVEKCDYFKGFVALQSLAGGTGSGLGSFVCDVLREHYPSSYLLNTVVWPYRSGEVIVQNYNTLLTMACLSESSDGIMILENDLADQICRRLLAISKPSFGAMNQVLANHMAAVLLPA 236          
BLAST of mRNA_P-wetherbeei_contig6406.3.1 vs. uniprot
Match: A0A485LB49_9STRA (Tubulin delta chain n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LB49_9STRA)

HSP 1 Score: 162 bits (411), Expect = 6.020e-44
Identity = 98/265 (36.98%), Postives = 141/265 (53.21%), Query Frame = 1
Query:   10 SSIVVQVGQCGNQVGSAFLQTM----------------REHGDRG-GVFRGDVARAVLVDTEPKAVDRAVLAAQRTSRAVAGGTXXXXXXXXXXXXXXXXXXPAPPWRYDRRAVVRARNEGGAANNWAYGYAGYGPATAARAVDAVRREAERCDRLDAFLLVHSAAGGTGSGLGTFLTEELRDRFPAVTVCNALVCPYRAGEVIVQDYNCMFALAHLMDCSDAVLMFENERAGAVCSRQLNLERPTIADLNGVICGQLVAAALPS 753
            S + +Q+GQCGNQVG +    +                R H  +  G      ARAVL+D EPK V++ +  A   S+A                           W+YD   VV    +GG+ NNWAYGYA +G A+A    D VR+E E+CD    FL + S AGGTGSGLG+F+ + LR+ +P+  + N +V PYR+GEVIVQ+YN +  +A L + SD VL+ EN+ A  +C R L + +P+ A +N V+   + +  LP+
Sbjct:    2 SVVTLQLGQCGNQVGLSLFDKLAAELKHFSPEDKECFFRAHDAKNIGSHPKTTARAVLIDMEPKVVNQCLDKAGGKSQA---------------------------WQYDGANVVC--EQGGSGNNWAYGYAVHGNASADAVTDVVRKEVEQCDYFKGFLALQSLAGGTGSGLGSFVCDILREHYPSSYLLNTVVWPYRSGEVIVQNYNTLLTMACLSESSDGVLILENDMADQICQRLLAIPKPSFAQMNHVLANHIASILLPA 237          
BLAST of mRNA_P-wetherbeei_contig6406.3.1 vs. uniprot
Match: A0A024GL88_9STRA (Tubulin delta chain n=2 Tax=Albugo candida TaxID=65357 RepID=A0A024GL88_9STRA)

HSP 1 Score: 161 bits (408), Expect = 1.420e-43
Identity = 94/261 (36.02%), Postives = 139/261 (53.26%), Query Frame = 1
Query:   22 VQVGQCGNQVGSAFLQTMREHGD-------------RGGVFRGD----VARAVLVDTEPKAVDRAVLAAQRTSRAVAGGTXXXXXXXXXXXXXXXXXXPAPPWRYDRRAVVRARNEGGAANNWAYGYAGYGPATAARAVDAVRREAERCDRLDAFLLVHSAAGGTGSGLGTFLTEELRDRFPAVTVCNALVCPYRAGEVIVQDYNCMFALAHLMDCSDAVLMFENERAGAVCSRQLNLERPTIADLNGVICGQLVAAALPS 753
            +QVGQCGNQ+G+A    +    D                 FR D    +ARA+L+D EPK V + +      SR V                          WRYD    +  ++  G+ NNWA+GY  +G    A   + +R+EAE+CDRL  FL + SAAGGTGSGLG+FLT+ + D FP  ++ + ++ PY +GEV+VQ+YN +  +A L    D +L+ EN+ A A+C + L  +RP++ DLN ++  QL +  LP+
Sbjct:    4 IQVGQCGNQIGNALYDELSIRNDLSSTDPNNTSRMSESAFFRADKERYIARALLIDMEPKVVQQCL------SRKVGQC-----------------------WRYDSHNALYRQS--GSGNNWAHGYFEHGHKIEAGFQECLRKEAEQCDRLQGFLTLQSAAGGTGSGLGSFLTQSIVDDFPKKSILSTVIWPYTSGEVVVQNYNTLLTIASLAQLVDGILVMENDTAHAICRKLLRRQRPSLRDLNQLVANQLASVLLPT 233          
BLAST of mRNA_P-wetherbeei_contig6406.3.1 vs. uniprot
Match: A0A024UES8_9STRA (Tubulin delta chain n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UES8_9STRA)

HSP 1 Score: 162 bits (409), Expect = 1.430e-43
Identity = 100/268 (37.31%), Postives = 142/268 (52.99%), Query Frame = 1
Query:   10 SSIVVQVGQCGNQVGSAF---LQTMREH---GDRGGVFRGD---------------VARAVLVDTEPKAVDRAVLAAQRTSRAVAGGTXXXXXXXXXXXXXXXXXXPAPPWRYDRRAVVRARNEGGAANNWAYGYAGYGPATAARAVDAVRREAERCDRLDAFLLVHSAAGGTGSGLGTFLTEELRDRFPAVTVCNALVCPYRAGEVIVQDYNCMFALAHLMDCSDAVLMFENERAGAVCSRQLNLERPTIADLNGVICGQLVAAALP 750
            S + +Q+GQCGNQVG +F   L T  +H    DR   FR                  ARAVL+D EPK V++     +   RA  G                       PW+YD   +V  ++  G+ NNWAYGYA +G       +D VR+E ERCD    FL + S AGGTGSGLG+++ + LR+ +P+  + N++V PYR+GEVIVQ+YN +  +A L + SD +L+ EN+ +  +C R L +  P+ A +N V+   L A  LP
Sbjct:    2 SVVTLQLGQCGNQVGLSFFDKLSTELQHFSAEDRECFFRSHDSKTIAGHDEARQRATARAVLIDMEPKVVNQCF---ENAGRATGGI----------------------PWQYDAANIVCEQS--GSGNNWAYGYAVHGTGCHEGVLDVVRKEVERCDYFKGFLALQSLAGGTGSGLGSYVCDSLRELYPSSYLLNSVVWPYRSGEVIVQNYNTLLTMACLSESSDGMLILENDLSDQICQRLLAIPAPSFAQMNQVLANHLAAVLLP 242          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6406.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LE04_ECTSI1.050e-5641.67Tubulin delta chain n=1 Tax=Ectocarpus siliculosus... [more]
A0A6J2QWD6_COTGO2.930e-4539.39Tubulin delta chain n=7 Tax=Perciformes TaxID=8111... [more]
A0A7S0ILB2_MICPS7.340e-4536.43Tubulin delta chain (Fragment) n=1 Tax=Micromonas ... [more]
A0A3B4D6X3_PYGNA1.580e-4438.35Tubulin delta chain n=4 Tax=Serrasalmidae TaxID=42... [more]
W4GTD2_9STRA1.760e-4438.06Tubulin delta chain n=1 Tax=Aphanomyces astaci Tax... [more]
H3CCF0_TETNG2.460e-4439.39Tubulin delta chain n=2 Tax=Tetraodon nigroviridis... [more]
A0A6G0XD18_9STRA4.290e-4435.85Tubulin delta chain n=1 Tax=Aphanomyces euteiches ... [more]
A0A485LB49_9STRA6.020e-4436.98Tubulin delta chain n=1 Tax=Aphanomyces stellatus ... [more]
A0A024GL88_9STRA1.420e-4336.02Tubulin delta chain n=2 Tax=Albugo candida TaxID=6... [more]
A0A024UES8_9STRA1.430e-4337.31Tubulin delta chain n=1 Tax=Aphanomyces invadans T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6406contigP-wetherbeei_contig6406:2452..3204 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LE04
Preferred nameTUBD1
PFAMsTubulin
Model size753
Max annot lvl2759|Eukaryota
KEGG koko:K10390
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0008150,GO:0008589,GO:0009966,GO:0009967,GO:0010646,GO:0010647,GO:0015630,GO:0023051,GO:0023056,GO:0031974,GO:0031981,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044422,GO:0044424,GO:0044428,GO:0044430,GO:0044444,GO:0044446,GO:0044450,GO:0044464,GO:0045880,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0050789,GO:0050794,GO:0065007,GO:0070013
Exons1
Evalue1.72e-57
EggNOG OGsCOG5023@1|root,KOG1374@2759|Eukaryota
Descriptionmicrotubule nucleation
Cds size753
COG categoryZ
BRITEko00000,ko03036,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186910.8400807-CDS-P-wetherbeei_contig6406:2451..32041683186910.8400807-CDS-P-wetherbeei_contig6406:2451..3204Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6406 2452..3204 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6406.3.1prot_P-wetherbeei_contig6406.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6406 2452..3204 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6406.3.1

>prot_P-wetherbeei_contig6406.3.1 ID=prot_P-wetherbeei_contig6406.3.1|Name=mRNA_P-wetherbeei_contig6406.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=251bp
MASSSIVVQVGQCGNQVGSAFLQTMREHGDRGGVFRGDVARAVLVDTEPK
AVDRAVLAAQRTSRAVAGGTAGAAAGGGGTSSSRGGGGPAPPWRYDRRAV
VRARNEGGAANNWAYGYAGYGPATAARAVDAVRREAERCDRLDAFLLVHS
AAGGTGSGLGTFLTEELRDRFPAVTVCNALVCPYRAGEVIVQDYNCMFAL
AHLMDCSDAVLMFENERAGAVCSRQLNLERPTIADLNGVICGQLVAAALP
S
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mRNA from alignment at P-wetherbeei_contig6406:2452..3204+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6406.3.1 ID=mRNA_P-wetherbeei_contig6406.3.1|Name=mRNA_P-wetherbeei_contig6406.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=753bp|location=Sequence derived from alignment at P-wetherbeei_contig6406:2452..3204+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGTCCTCATCCATCGTGGTCCAGGTAGGCCAATGCGGCAACCAGGT CGGCTCCGCCTTCCTCCAAACGATGCGAGAGCACGGGGACCGCGGCGGCG TCTTTCGCGGCGACGTCGCCCGTGCCGTCCTCGTCGATACGGAGCCCAAG GCGGTCGACAGGGCCGTATTGGCAGCACAGCGCACCAGCCGTGCGGTAGC AGGGGGAACGGCAGGAGCAGCAGCTGGCGGCGGCGGCACCAGCAGCAGTC GCGGCGGCGGCGGCCCCGCCCCGCCGTGGCGTTACGACCGCCGCGCCGTC GTCCGGGCACGCAACGAGGGCGGCGCCGCTAATAACTGGGCCTACGGCTA CGCGGGCTATGGCCCGGCCACCGCCGCCCGCGCTGTCGATGCGGTCCGGC GCGAGGCCGAGCGCTGCGACCGCCTCGACGCCTTCCTCCTCGTGCACAGC GCAGCCGGCGGCACCGGTTCGGGCCTCGGCACCTTCCTGACCGAGGAGCT GCGCGACCGTTTCCCGGCGGTGACGGTTTGCAATGCCCTCGTCTGTCCCT ATCGCGCCGGCGAGGTGATTGTCCAGGACTACAATTGCATGTTCGCGCTG GCGCATTTGATGGACTGCTCCGACGCCGTGCTGATGTTCGAAAACGAGCG CGCCGGTGCCGTCTGCAGCCGGCAGCTCAATCTGGAACGTCCCACCATCG CCGATCTGAACGGCGTCATCTGCGGACAGCTGGTTGCCGCCGCGCTGCCC TCG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6406:2452..3204+

>mRNA_P-wetherbeei_contig6406.3.1 ID=mRNA_P-wetherbeei_contig6406.3.1|Name=mRNA_P-wetherbeei_contig6406.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=753bp|location=Sequence derived from alignment at P-wetherbeei_contig6406:2452..3204+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGTCCTCATCCATCGTGGTCCAGGTAGGCCAATGCGGCAACCAGGT
CGGCTCCGCCTTCCTCCAAACGATGCGAGAGCACGGGGACCGCGGCGGCG
TCTTTCGCGGCGACGTCGCCCGTGCCGTCCTCGTCGATACGGAGCCCAAG
GCGGTCGACAGGGCCGTATTGGCAGCACAGCGCACCAGCCGTGCGGTAGC
AGGGGGAACGGCAGGAGCAGCAGCTGGCGGCGGCGGCACCAGCAGCAGTC
GCGGCGGCGGCGGCCCCGCCCCGCCGTGGCGTTACGACCGCCGCGCCGTC
GTCCGGGCACGCAACGAGGGCGGCGCCGCTAATAACTGGGCCTACGGCTA
CGCGGGCTATGGCCCGGCCACCGCCGCCCGCGCTGTCGATGCGGTCCGGC
GCGAGGCCGAGCGCTGCGACCGCCTCGACGCCTTCCTCCTCGTGCACAGC
GCAGCCGGCGGCACCGGTTCGGGCCTCGGCACCTTCCTGACCGAGGAGCT
GCGCGACCGTTTCCCGGCGGTGACGGTTTGCAATGCCCTCGTCTGTCCCT
ATCGCGCCGGCGAGGTGATTGTCCAGGACTACAATTGCATGTTCGCGCTG
GCGCATTTGATGGACTGCTCCGACGCCGTGCTGATGTTCGAAAACGAGCG
CGCCGGTGCCGTCTGCAGCCGGCAGCTCAATCTGGAACGTCCCACCATCG
CCGATCTGAACGGCGTCATCTGCGGACAGCTGGTTGCCGCCGCGCTGCCC
TCG
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