mRNA_P-wetherbeei_contig6400.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig6400.2.1 vs. uniprot
Match: A0A835Z0F7_9STRA (20S proteasome subunit alpha 2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0F7_9STRA) HSP 1 Score: 238 bits (607), Expect = 4.270e-75 Identity = 112/133 (84.21%), Postives = 127/133 (95.49%), Query Frame = 1
Query: 199 REMQPVSQLVRETAAVMQEFTQSGGVRPFGVSLLLAGYDDEGPHLYQVDPSGAYFGWKATAIGKKYLNAKNFLEKRYNEDMELDDAIHTALLTMREGFEGEMTDKNIEVGVVGADRKFRVLTPLEVKDYLDEA 597
RE+QPVSQLVR+TA VMQE+TQSGGVRPFGVSLL+AGYDD+GP LYQVDPSGAYFGWKA+AIGK +LNAK+FLEKRYN++MELDDAIHTALLTMREGFEGEMT+ NIE+G+VG DRKFR+LTP EV+DYLDEA
Sbjct: 102 RELQPVSQLVRDTAGVMQEYTQSGGVRPFGVSLLVAGYDDDGPQLYQVDPSGAYFGWKASAIGKNFLNAKSFLEKRYNDEMELDDAIHTALLTMREGFEGEMTEHNIELGIVGEDRKFRILTPAEVRDYLDEA 234
BLAST of mRNA_P-wetherbeei_contig6400.2.1 vs. uniprot
Match: W7TKE3_9STRA (Proteasome subunit alpha type 2 n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TKE3_9STRA) HSP 1 Score: 237 bits (604), Expect = 1.250e-74 Identity = 110/134 (82.09%), Postives = 125/134 (93.28%), Query Frame = 1
Query: 199 REMQPVSQLVRETAAVMQEFTQSGGVRPFGVSLLLAGYDDEGPHLYQVDPSGAYFGWKATAIGKKYLNAKNFLEKRYNEDMELDDAIHTALLTMREGFEGEMTDKNIEVGVVGADRKFRVLTPLEVKDYLDEAN 600
RE QPV QLVR+TA VMQEFTQSGGVRPFG+SLL+AGYDD GP L+QVDPSGAYFGW+ATAIGK ++NAKNFLEKRYNE+MELDDA+HTALLT+REGFEGEM + NIE+G++GADRKFR+LTP EVKDYLDEAN
Sbjct: 103 REHQPVGQLVRDTAGVMQEFTQSGGVRPFGLSLLVAGYDDNGPQLFQVDPSGAYFGWQATAIGKNHVNAKNFLEKRYNEEMELDDAVHTALLTLREGFEGEMNESNIEIGIIGADRKFRILTPAEVKDYLDEAN 236
BLAST of mRNA_P-wetherbeei_contig6400.2.1 vs. uniprot
Match: A0A6U1Q5Y5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1Q5Y5_9STRA) HSP 1 Score: 230 bits (586), Expect = 1.620e-72 Identity = 110/132 (83.33%), Postives = 123/132 (93.18%), Query Frame = 1
Query: 202 EMQPVSQLVRETAAVMQEFTQSGGVRPFGVSLLLAGYDDEGPHLYQVDPSGAYFGWKATAIGKKYLNAKNFLEKRYNEDMELDDAIHTALLTMREGFEGEMTDKNIEVGVVGADRKFRVLTPLEVKDYLDEA 597
E+QPV+QLV+E A VMQEFTQSGGVRPFGVSLL+AGYDD+GP L+QVDPSGAYFGWKA+AIGK Y+NAKNFLEKRY+EDMELDDA+HTALLTMRE FEGEM + NIE+G+VGAD KFRVLTP EVKDYLDEA
Sbjct: 61 EVQPVAQLVKEMAGVMQEFTQSGGVRPFGVSLLVAGYDDDGPQLFQVDPSGAYFGWKASAIGKGYVNAKNFLEKRYSEDMELDDAVHTALLTMRESFEGEMNENNIELGIVGADGKFRVLTPEEVKDYLDEA 192
BLAST of mRNA_P-wetherbeei_contig6400.2.1 vs. uniprot
Match: A0A7S1BSA3_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BSA3_9STRA) HSP 1 Score: 230 bits (586), Expect = 6.410e-72 Identity = 105/134 (78.36%), Postives = 124/134 (92.54%), Query Frame = 1
Query: 199 REMQPVSQLVRETAAVMQEFTQSGGVRPFGVSLLLAGYDDEGPHLYQVDPSGAYFGWKATAIGKKYLNAKNFLEKRYNEDMELDDAIHTALLTMREGFEGEMTDKNIEVGVVGADRKFRVLTPLEVKDYLDEAN 600
RE+QPV LV++TA VMQE+TQSGGVRPFGVSLL+AGYDD+GPHLYQVDPSGAYFGW+ATAIGK Y+NAKNFLEKRY E+MEL+DAIHTALLT+REGFEGEM +NIEVG++G DRKF++L P +++DYLDEAN
Sbjct: 102 REVQPVGALVKQTAGVMQEYTQSGGVRPFGVSLLVAGYDDDGPHLYQVDPSGAYFGWRATAIGKNYINAKNFLEKRYQEEMELEDAIHTALLTLREGFEGEMNGRNIEVGIIGKDRKFKLLNPQQIQDYLDEAN 235
BLAST of mRNA_P-wetherbeei_contig6400.2.1 vs. uniprot
Match: A0A8J2SQ24_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SQ24_9STRA) HSP 1 Score: 219 bits (557), Expect = 1.600e-67 Identity = 102/133 (76.69%), Postives = 122/133 (91.73%), Query Frame = 1
Query: 199 REMQPVSQLVRETAAVMQEFTQSGGVRPFGVSLLLAGYDDEGPHLYQVDPSGAYFGWKATAIGKKYLNAKNFLEKRYNEDMELDDAIHTALLTMREGFEGEMTDKNIEVGVVGADRKFRVLTPLEVKDYLDEA 597
R ++PV LV++TA+VMQE+TQSGGVRPFG+SLL+AGYDDEGP L+QVDPSGAY+GWKA+AIGK + NA++FLEKRYN+D+ELDDAIHTALLTMREGFEGEMT+ IEVG+VG DR FRVLTP EVKD+LDE+
Sbjct: 103 RALKPVKALVQDTASVMQEYTQSGGVRPFGISLLVAGYDDEGPQLFQVDPSGAYYGWKASAIGKNFKNARSFLEKRYNDDVELDDAIHTALLTMREGFEGEMTEHTIEVGIVGEDRVFRVLTPAEVKDFLDES 235
BLAST of mRNA_P-wetherbeei_contig6400.2.1 vs. uniprot
Match: A0A7S2BD82_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BD82_9STRA) HSP 1 Score: 218 bits (556), Expect = 2.190e-67 Identity = 98/133 (73.68%), Postives = 121/133 (90.98%), Query Frame = 1
Query: 202 EMQPVSQLVRETAAVMQEFTQSGGVRPFGVSLLLAGYDDEGPHLYQVDPSGAYFGWKATAIGKKYLNAKNFLEKRYNEDMELDDAIHTALLTMREGFEGEMTDKNIEVGVVGADRKFRVLTPLEVKDYLDEAN 600
E QP+ LV++TA+V QE+TQ+GGVRPFGVSLL+AGYDD+GPHL+QVDPSGAYFGWKATAIGK + NA++FLE+R+NE+MEL+DAIH ALLTMREG+EGEM + NIE+ ++G DRKFR+LTP EV+DYLDEAN
Sbjct: 103 EQQPIPMLVKDTASVCQEYTQAGGVRPFGVSLLVAGYDDDGPHLFQVDPSGAYFGWKATAIGKNFKNARSFLERRFNEEMELEDAIHNALLTMREGYEGEMNENNIELAIIGEDRKFRILTPAEVRDYLDEAN 235
BLAST of mRNA_P-wetherbeei_contig6400.2.1 vs. uniprot
Match: A0A6P5WH88_DURZI (Proteasome subunit alpha type n=4 Tax=Pentapetalae TaxID=1437201 RepID=A0A6P5WH88_DURZI) HSP 1 Score: 216 bits (551), Expect = 2.730e-67 Identity = 100/135 (74.07%), Postives = 121/135 (89.63%), Query Frame = 1
Query: 190 TCCREMQPVSQLVRETAAVMQEFTQSGGVRPFGVSLLLAGYDDEGPHLYQVDPSGAYFGWKATAIGKKYLNAKNFLEKRYNEDMELDDAIHTALLTMREGFEGEMTDKNIEVGVVGADRKFRVLTPLEVKDYLDE 594
+C +E PV+QLVRETAAVMQEFTQSGGVRPFGVSLL+AGYDD GP LYQVDPSG+YF WKA+A+GK NAK FLEKRY +DMELDDA+HTA+LT++EGFEG+++ KNIE+G++GAD+KFRVLTP E++DYL E
Sbjct: 52 SCLQEPIPVTQLVRETAAVMQEFTQSGGVRPFGVSLLVAGYDDNGPQLYQVDPSGSYFSWKASAMGKNVSNAKTFLEKRYTDDMELDDAVHTAILTLKEGFEGQISGKNIEIGIIGADKKFRVLTPAEIEDYLAE 186
BLAST of mRNA_P-wetherbeei_contig6400.2.1 vs. uniprot
Match: A0A7S2GQ83_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GQ83_9STRA) HSP 1 Score: 218 bits (554), Expect = 7.510e-67 Identity = 102/133 (76.69%), Postives = 118/133 (88.72%), Query Frame = 1
Query: 202 EMQPVSQLVRETAAVMQEFTQSGGVRPFGVSLLLAGYDDEGPHLYQVDPSGAYFGWKATAIGKKYLNAKNFLEKRYNEDMELDDAIHTALLTMREGFEGEMTDKNIEVGVVGADRKFRVLTPLEVKDYLDEAN 600
E QP+ LVR+TA V QE+TQSGGVRPFGVSLL+AGYDD+GPHL+QVDPSGAYFGWKATAIGK + NA++FLE+RY EDM+L+DAIH ALLTMREGFEGEM + NIE+ VV DRKFR+LTP EV+DYLDEAN
Sbjct: 120 EKQPIPMLVRDTAGVCQEYTQSGGVRPFGVSLLVAGYDDDGPHLFQVDPSGAYFGWKATAIGKNFKNARSFLERRYREDMDLEDAIHNALLTMREGFEGEMDEHNIELAVVDQDRKFRILTPSEVRDYLDEAN 252
BLAST of mRNA_P-wetherbeei_contig6400.2.1 vs. uniprot
Match: A0A482SLH1_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SLH1_9ARCH) HSP 1 Score: 214 bits (545), Expect = 8.250e-67 Identity = 101/135 (74.81%), Postives = 123/135 (91.11%), Query Frame = 1
Query: 199 REMQPVSQLVRETAAVMQEFTQSGGVRPFGVSLLLAGYDDEGPHLYQVDPSGAYFGWKATAIGKKYLNAKNFLEKRYNEDMELDDAIHTALLTMREGFEGEMTDKNIEVGVVGA-DRKFRVLTPLEVKDYLDEAN 600
RE+QPVSQ+VRE+A +MQE+TQSGGVRPFGVS L+AGYD++GP LYQVDPSG+ FGWKATAIGK Y+NAKNFLE+RY++DMELDDA+H ALLT++E +EGEMT+ NIEVG++ A D+ FRVLTP EV+DYLDEAN
Sbjct: 24 REVQPVSQVVRESALLMQEYTQSGGVRPFGVSCLVAGYDEDGPQLYQVDPSGSAFGWKATAIGKNYINAKNFLERRYSDDMELDDAVHIALLTLKESYEGEMTEFNIEVGIISAVDKVFRVLTPQEVRDYLDEAN 158
BLAST of mRNA_P-wetherbeei_contig6400.2.1 vs. uniprot
Match: A0A7S1ZX62_TRICV (Hypothetical protein n=2 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZX62_TRICV) HSP 1 Score: 216 bits (551), Expect = 1.330e-66 Identity = 109/136 (80.15%), Postives = 122/136 (89.71%), Query Frame = 1
Query: 199 REMQPVSQLVRETAAVMQEFTQSGGVRPFGVSLLLAGYDDEG-PHLYQVDPSGAYFGWKATAIGKKYLNAKNFLEKRYNEDMELDDAIHTALLTMREGFEGEMTDKNIEVGVVG-ADRKFRVLTPLEVKDYLDEAN 600
RE QPVSQLV+ TA+VMQE+TQSGGVRPFGVSLL+AG D +G P LYQVDPSGAYFGWKATAIGK Y+NAKNFLEKRY +DMEL+DA+HTALLT+REGFEGEMT KNIEVG+V +D KFRVLT EV+DYLDEAN
Sbjct: 102 REPQPVSQLVKSTASVMQEYTQSGGVRPFGVSLLVAGVDGDGTPRLYQVDPSGAYFGWKATAIGKNYVNAKNFLEKRYTDDMELEDAVHTALLTLREGFEGEMTSKNIEVGIVSKSDGKFRVLTADEVQDYLDEAN 237 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6400.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig6400.2.1 >prot_P-wetherbeei_contig6400.2.1 ID=prot_P-wetherbeei_contig6400.2.1|Name=mRNA_P-wetherbeei_contig6400.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=133bp MQPVSQLVRETAAVMQEFTQSGGVRPFGVSLLLAGYDDEGPHLYQVDPSGback to top mRNA from alignment at P-wetherbeei_contig6400:1893..3457- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig6400.2.1 ID=mRNA_P-wetherbeei_contig6400.2.1|Name=mRNA_P-wetherbeei_contig6400.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1565bp|location=Sequence derived from alignment at P-wetherbeei_contig6400:1893..3457- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig6400:1893..3457- >mRNA_P-wetherbeei_contig6400.2.1 ID=mRNA_P-wetherbeei_contig6400.2.1|Name=mRNA_P-wetherbeei_contig6400.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=399bp|location=Sequence derived from alignment at P-wetherbeei_contig6400:1893..3457- (Phaeothamnion wetherbeei SAG_119_79)back to top |