mRNA_P-wetherbeei_contig64.3.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig64.3.2 vs. uniprot
Match: D7G6E4_ECTSI (PAP_fibrillin domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6E4_ECTSI) HSP 1 Score: 181 bits (458), Expect = 9.670e-53 Identity = 97/183 (53.01%), Postives = 122/183 (66.67%), Query Frame = 1
Query: 178 AKPAAAVRAPAAKQFKAAIRENAIGTSNGVTASSVQREAIKRAVNGLVKLNTVKSPATSKLSDGTWRLVYTTTMGSSAGKLGPFVGEVKQIVTSTADPPLYLNIVTLGPLQGKLSATWEVAGPRQWRVIFRDIAILLFDITLVKKDINNAVGLWTLLYIDADYRVLTARSLARDEGNLYILEK 726
AK A V + K I E A GTSNG+ A+ QR+AI +A+NGL N K TS+L+ GTW L+YTTT G+S GKLGPF+GEV+Q V LY+N V LGPL G+L ATW+V QW+V+F+ IA LLF LVK +++ A GLWTL Y+D D RVLTARSL RD GN+Y+L +
Sbjct: 48 AKHADEVAVEEVRALKQTILEEAAGTSNGLKATPQQRDAISKAINGLAAANPTKDITTSELATGTWDLIYTTTPGASGGKLGPFIGEVQQEVDIAEG--LYVNYVRLGPLTGRLEATWDVVNKSQWKVVFKSIAFLLFGQQLVKNELDQA-GLWTLSYLDDDMRVLTARSLERDTGNVYVLAR 227
BLAST of mRNA_P-wetherbeei_contig64.3.2 vs. uniprot
Match: A0A0G4E8H9_VITBC (PAP_fibrillin domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4E8H9_VITBC) HSP 1 Score: 138 bits (347), Expect = 6.000e-36 Identity = 76/178 (42.70%), Postives = 106/178 (59.55%), Query Frame = 1
Query: 211 AKQFKAAIRENAIGTSNGVTASSVQREAIKRAVNGLVKLNTVKSPATSKLSDGTWRLVYTTTMGSSAGKLGPFVGEVKQIVTSTADPPLYLNIVTLGPLQGKLSATWEVAGPRQWRVIFRDIAILLFDITLVKKDINNAVGLWTLLYIDADYRVLTARSLARDEG------NLYILEK 726
A K I A G NG+ + +RE I V L + +K+ A SK +G WRLVYTTT GSSAGKLGPFVG+V Q++ +D +Y+N V +GP+Q L A+W+V GP +WRV F++I +F I L K ++ N VG W + Y+D DYR+L AR + N+Y+L +
Sbjct: 69 AASLKREIGRIAKGKDNGIKVTPAEREKILSLVKQLESSSPIKAAAQSKRLNGLWRLVYTTTPGSSAGKLGPFVGDVTQMIDMDSD--VYINYVDIGPVQAFLEASWDVLGPNRWRVKFQNIGFRVFGIPLAKNELKN-VGDWRMTYLDDDYRILWARGSRQQPDASAMPENVYVLRR 243
BLAST of mRNA_P-wetherbeei_contig64.3.2 vs. uniprot
Match: A0A7S2IJB9_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2IJB9_9STRA) HSP 1 Score: 137 bits (344), Expect = 1.060e-35 Identity = 76/170 (44.71%), Postives = 105/170 (61.76%), Query Frame = 1
Query: 223 KAAIRENAIGTSNGVTASSVQREAIKRAVNGLVKLNTVKSPATSKLSDGTWRLVYTTTMGSSAGKLGPFVGEVKQIVTSTADPPLYLNIVTLGP--LQGKLSATWEVAGPRQWRVIFRDIAILLFDITLVKKDINNAVGLWTLLYIDADYRVLTARSLARDEGNLYILEK 726
K IR+ A GTSNG+ AS R+ I LVK+N KSPA S+ DG+W LVYTT GSSAGKLGPF G+V+Q + T + P Y+N V LG ++G LSA+W+V ++W V F + + I +++KD+ A G W + Y+D D+R+L A + N+YIL K
Sbjct: 62 KDTIRQLARGTSNGIDASKSVRDEIATLSKQLVKMNPTKSPALSEKLDGSWALVYTTNPGSSAGKLGPFTGDVEQAIRITGENPEYVNYVRLGGGLVEGMLSASWDVLSKKEWLVKFETLQFRILGIKILEKDLK-AEGTWKMEYLDDDFRILYAEG--GNSENIYILSK 228
BLAST of mRNA_P-wetherbeei_contig64.3.2 vs. uniprot
Match: K8Z6W7_NANGC (PAP_fibrillin domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z6W7_NANGC) HSP 1 Score: 130 bits (327), Expect = 4.930e-33 Identity = 84/196 (42.86%), Postives = 113/196 (57.65%), Query Frame = 1
Query: 166 DGIFAKPAAAVRAPAA-KQFKAAIRENAIGTSNGVTASSVQREAIKRAVNGLVKLNTVKSPATSKLSDGTWRLVYTTTMGSSAGKLGPFVGEVKQIVTSTADPPLYLNIVTL--GPLQGKLSATWEVAGPRQWRVIFRDIAILLFDITLV-KKDINNAVGLWTLLYIDADYRVLTARSLARDE-----GNLYILEK 726
+G K AA A AA KQ A+ +N NG+ A+ + I + L+K N K+ ATS DGTWRLVYT+T G SAGKLGPFVG+V Q + + Y+N V L G ++G L ATWEV G +W+VIF+DI +F I LV KK ++ G W L Y+D D R+LTA +L + N+Y+L +
Sbjct: 50 NGSKGKSAADAAAVAALKQDLYAVAKN---KDNGLKATESDKAKILSLASELIKRNPTKNIATSDKVDGTWRLVYTSTSGGSAGKLGPFVGQVLQKIDTAGGD--YVNFVRLFGGLVEGALVATWEVKGANEWKVIFQDITFRVFGIPLVDKKPLSGQAGQWKLTYVDEDLRILTAAALTNEGKPAKVSNIYVLRR 240
BLAST of mRNA_P-wetherbeei_contig64.3.2 vs. uniprot
Match: A0A7S2ELK7_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2ELK7_9STRA) HSP 1 Score: 127 bits (319), Expect = 8.470e-32 Identity = 77/187 (41.18%), Postives = 111/187 (59.36%), Query Frame = 1
Query: 181 KPAAAVRAPAAKQFKAAIRENAIGTSNGVTASSVQREAIKRAVNGLVKLNTVKSPATSKLSDGTWRLVYTTTMGSSAGKLGPFVGEVKQIVT--STADPPLYLNIVTLGP--LQGKLSATWEVAGPRQWRVIFRDIAILLFDITLVKKDINNAVGLWTLLYIDADYRVL-TARSLARDEGNLYILEK 726
K AA A AK+ K +IR+ + GTSNG+ A R+ I L K+N VK+ A+S DG+W LVYTT GSSAGKLGPF GEV+Q + + P Y+N V LG ++G L A+W+V +W V F + + I +V+K+++ A G+W + Y+D D+R+L A + + N+YIL K
Sbjct: 61 KQDAAAAAAKAKELKDSIRQLSKGTSNGIAAPESTRDEIATLCKELEKMNKVKNIASSTKMDGSWNLVYTTNEGSSAGKLGPFTGEVEQAIRILGREENPEYINYVRLGGGLVEGALGASWDVLSNNKWLVKFETLQFRILGIKVVEKELS-AQGVWRMEYLDDDFRILYAAGGVNVPKENVYILSK 246
BLAST of mRNA_P-wetherbeei_contig64.3.2 vs. uniprot
Match: A0A8J6CA72_DIALT (PAP_fibrillin domain-containing protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CA72_DIALT) HSP 1 Score: 125 bits (313), Expect = 2.190e-31 Identity = 79/191 (41.36%), Postives = 107/191 (56.02%), Query Frame = 1
Query: 178 AKPAAAVRAPAA-KQFKAAIRENAIGTSNGVTASSVQREAIKRAVNGLVKLNTVKSPATSKLSDGTWRLVYTTTMGSSAGKLGPFVGEVKQIVTSTADPPLYLNIVTLGP-----LQGKLSATWEVAGPRQWRVIFRDIAILLFDITLVKKDINNAVGLWTLLYIDADYRVLTARSLARDEGNLYILEKEG 732
A PA APAA + K++I A GT NG+TA I+ L +LN ATS+L DG W+LVYT+T G SAGK+GPFVG V+Q Y N V LGP + G+L ATW+V G WRV F+ I+ L + +VK + G W L+Y D D+R+L A+ + E N+Y+L++ G
Sbjct: 12 ALPAGRAAAPAAARPLKSSIVRLAAGTQNGLTADVSTAAQIQALAKLLEELNPTAHLATSELVDGQWQLVYTSTSGGSAGKIGPFVGRVEQHFDLRQGR--YKNFVHLGPQAIDLVTGELQATWDVLGDALWRVNFKSISFFLLGLPIVKDKPLSQCGTWRLVYTDDDFRILWAQGGTKPE-NIYVLKRTG 199
BLAST of mRNA_P-wetherbeei_contig64.3.2 vs. uniprot
Match: A0A7S4NCX2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4NCX2_9STRA) HSP 1 Score: 126 bits (316), Expect = 4.690e-31 Identity = 86/250 (34.40%), Postives = 129/250 (51.60%), Query Frame = 1
Query: 10 NPPPSFSSLAKMRCGVAFLVLWALLLRVSSFAPSPFPSLPSQSTSRIRMGVFDGIFAKPA-AAVRAPAAK-----QFKAAIRENAIGTSNGVTASSVQREAIKRAVNGLVKLNTVKSPATSKLSDGTWRLVYTTTMGSSAGKLGPFVGEVKQIVT--STADPPLYLNIVTLG--PLQGKLSATWEVAGPRQWRVIFRDIAILLFDITLVKKDINNAVGLWTLLYIDADYRVL-TARSLARDEGNLYILEK 726
+PPP+ S+ G AF S+ + P + R+ G KP + R P+ + K+ I++ A GTSNG TAS R+ I + L N +TS DG+W+L Y+T G+SAGKLGPFVGEV+Q++ D P Y+N V LG ++G L+ATW+V +WRV F + + + LV+K++ A G+W + Y+D D+R+L A + + N+YIL K
Sbjct: 37 SPPPAASAFIPRAAGPAF----------SAQSLRPRATTTELGIGRLFENFLPGGNNKPTETSTRVPSVSPERVLEIKSEIKDLAAGTSNGCTASEEVRDGIAALASELEGANPTPDLSTSPRMDGSWKLTYSTNGGTSAGKLGPFVGEVEQLIRIEGREDSPDYINYVRLGGGAVEGALTATWDVLAEDKWRVKFGSVTFRVLGVPLVEKELG-AEGIWRMTYLDEDFRILYAAGGVNVPKENIYILAK 275
BLAST of mRNA_P-wetherbeei_contig64.3.2 vs. uniprot
Match: A0A7S4DWF7_9EUKA (Hypothetical protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S4DWF7_9EUKA) HSP 1 Score: 125 bits (313), Expect = 6.800e-31 Identity = 74/174 (42.53%), Postives = 104/174 (59.77%), Query Frame = 1
Query: 214 KQFKAAIRENAIGTSNGVTASSVQREAIKRAVNGLVKLNTVKSPATSKLSDGTWRLVYTTTMGSSAGKLGPFVGEVKQIVTSTADPPLYLNIVTL--GPLQGKLSATWEVAGPRQWRVIFRDIAILLFDITLVKKDINNAVGLWTLLYIDADYRVLTARSLARDEG-NLYILEK 726
+ K AIRE + GT+NGV AS +RE I + L N + +S L G+W+L+YTT GSSAGK+GPFVG+V Q V Y+NIV+L G +G L+ATW+ + W+V F+DI + LF + L +K++ A G W + Y+D D+RVL A E N+Y+L K
Sbjct: 78 ESLKTAIREKSKGTNNGVDASPARREEIAELLQELEAANPTRKLTSSPLISGSWKLLYTTNDGSSAGKIGPFVGDVVQNVELQDGE--YVNIVSLANGAFRGVLTATWDNVSDKLWKVKFKDIKLELFGVVLQEKELP-ATGTWRMTYLDDDFRVLYAMGGKNQEKENVYVLAK 248
BLAST of mRNA_P-wetherbeei_contig64.3.2 vs. uniprot
Match: A0A7S2XW95_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XW95_9STRA) HSP 1 Score: 123 bits (308), Expect = 2.960e-30 Identity = 73/165 (44.24%), Postives = 98/165 (59.39%), Query Frame = 1
Query: 229 AIRENAIGTSNGVTASSVQREAIKRAVNGLVKLNTVKSPATSKLSDGTWRLVYTTTMGSSAGKLGPFVGEVKQIVTSTADPPLYLNIVTLGPLQGKLSATWEVAGPRQWRVIFRDIAILLFDITLVKKDI-NNAVGLWTLLYIDADYRVLTARSLARDEGNLYIL 720
AI + A GTSNGV AS+ +E I L LN K +S+L G W L+YTT G+SAGKLGPFVGEVKQI+ D Y+N+VT+G ++ L ATW R W VIF+D+ LF I ++ K ++A G W + ++D + R+L A A N+YIL
Sbjct: 67 AIVQLAQGTSNGVKASTEIKEKIAGLAERLENLNQAKDMTSSQLLQGEWDLIYTTNQGNSAGKLGPFVGEVKQIIDLQEDR--YVNMVTVGIIEAVLMATWITRNNRNWTVIFKDVTFKLFGIPVISKKFPDSARGDWEMTFMDDNMRILYASGKAGVR-NIYIL 228
BLAST of mRNA_P-wetherbeei_contig64.3.2 vs. uniprot
Match: A0A7S4CQT7_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CQT7_9EUGL) HSP 1 Score: 114 bits (285), Expect = 6.430e-26 Identity = 73/163 (44.79%), Postives = 99/163 (60.74%), Query Frame = 1
Query: 250 GTSNGVTASSVQREAIKRAVNGLVKLNTVKSPATSKLSDGTWRLVYTTTMGSSAGKLGPFVGEVKQIVTSTADPPLYLNIVTLGP--LQGKLSATWEVAGPRQWRVIFRDIAILLFDITLVKKDINNAVGLWTLLYIDADYRVLTARS--LARDEGNLYILEK 726
GTSNG +AS + A AV+ L KLN ATS+ G W+L+YTT G+SAGKLGPFVG+V Q V ++ Y NIV LGP ++ L A W+V GP +W+V FR I LF + +K+++N G+W + Y+D RVL A A+ E N+Y+L K
Sbjct: 192 GTSNGTSASEDTKAAFLDAVSKLEKLNPEPEIATSEGMTGNWKLLYTTNTGNSAGKLGPFVGDVFQNVVYSSGK--YENIVRLGPGIVEACLGADWDVLGPCKWQVNFRYIRFSLFGNVVSEKEVSNC-GVWRMTYLDDSMRVLWASGGKNAKVE-NVYVLVK 350 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig64.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 20
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig64.3.2 >prot_P-wetherbeei_contig64.3.2 ID=prot_P-wetherbeei_contig64.3.2|Name=mRNA_P-wetherbeei_contig64.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=232bp MRCGVAFLVLWALLLRVSSFAPSPFPSLPSQSTSRIRMGVFDGIFAKPAAback to top mRNA from alignment at P-wetherbeei_contig64:13797..14940- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig64.3.2 ID=mRNA_P-wetherbeei_contig64.3.2|Name=mRNA_P-wetherbeei_contig64.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1144bp|location=Sequence derived from alignment at P-wetherbeei_contig64:13797..14940- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig64:13797..14940- >mRNA_P-wetherbeei_contig64.3.2 ID=mRNA_P-wetherbeei_contig64.3.2|Name=mRNA_P-wetherbeei_contig64.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=696bp|location=Sequence derived from alignment at P-wetherbeei_contig64:13797..14940- (Phaeothamnion wetherbeei SAG_119_79)back to top |