prot_P-wetherbeei_contig6399.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6399.1.1
Unique Nameprot_P-wetherbeei_contig6399.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length282
Homology
BLAST of mRNA_P-wetherbeei_contig6399.1.1 vs. uniprot
Match: A0A6H5JHB7_9PHAE (C2H2-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JHB7_9PHAE)

HSP 1 Score: 326 bits (836), Expect = 2.950e-106
Identity = 175/275 (63.64%), Postives = 216/275 (78.55%), Query Frame = 0
Query:    1 MSRGVFQPITQVRLTNVAIVRLSRAGKRFEIACYRNKVVNWRNKLETDIDEVLQINSIFQNVSKGVLAKKKDILDAFGTVDETEVCKASNIVILEKGEMQVSDKERQAAMDSTFRDIATIVSEKCVDPTSNRPYTVGMIQNAMRDIHYATVATRSAKQQALDVIRQLAAVMPIARACMRLRVVADAEGGPALRAALEALGVDCGSGAGAVERRTVAEWTLDVLVDPGLFRKVEELVREQTGGQGQVQVLQLAVQEEGEADMDTELARKELLALQL 275
            MSR + QP+ QVRLTNVA+VRL++ GKRFEIACYRNKVVNWRN++ETD+DEVLQI S+F+NVSKGVLAK KD++ AFGT ++ E C+    +IL+KGEMQVSDKERQ A++S FRD+ATIVSEKCV+P SNRPYTV MI+ AMRD+H++   TRSAKQQAL+VI++L  VMPI RA M+LR+  D +  P L+ AL  LGVD     G     +  E  LD LVDPGL+R VEE VR   GG+  ++VLQL+VQ+EGEADMD EL RKELLA++L
Sbjct:    1 MSRAITQPVNQVRLTNVAVVRLNKTGKRFEIACYRNKVVNWRNRVETDLDEVLQIESVFENVSKGVLAKNKDLMKAFGTDNQLEACR----IILDKGEMQVSDKERQVALESVFRDVATIVSEKCVNPASNRPYTVSMIEKAMRDVHFSAHPTRSAKQQALEVIKKLKEVMPIDRAKMKLRISTDEDSTP-LKEALGELGVDSFENGGGAAAGSSGE-VLDFLVDPGLYRDVEEAVRTAAGGRCALEVLQLSVQQEGEADMDVELMRKELLAVKL 269          
BLAST of mRNA_P-wetherbeei_contig6399.1.1 vs. uniprot
Match: A0A835Z759_9STRA (SBDS protein C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z759_9STRA)

HSP 1 Score: 318 bits (815), Expect = 8.560e-104
Identity = 174/275 (63.27%), Postives = 215/275 (78.18%), Query Frame = 0
Query:    1 MSRGVFQPITQVRLTNVAIVRLSRAGKRFEIACYRNKVVNWRNKLETDIDEVLQINSIFQNVSKGVLAKKKDILDAFGTVDETEVCKASNIVILEKGEMQVSDKERQAAMDSTFRDIATIVSEKCVDPTSNRPYTVGMIQNAMRDIHYATVATRSAKQQALDVIRQLAAVMPIARACMRLRVVADAEGGPALRAALEALGVDCGSGAGAVERRTVAEWTLDVLVDPGLFRKVEELVREQTGGQGQVQVLQLAVQEEGEADMDTELARKELLALQL 275
            MSR VFQP+ QVRLTNVA+VR++R GKRFEIACYRNKVVNWRN++ETD++EVLQI ++FQNVSKGVLA KKD+  AFGT DE E+ +     IL+KGE+QVSDKER+A  +S FRD+ATIVSEKCV+P SNRPYTV MI+NAMRD+H+A    +SAK QAL++I +L  VMPIARA M LRV A A    ++ A+L ALGV         + RT AE ++DVLVDPGLFR +EE +R   GG  +V+VLQL+VQ+EGEAD+D E ARK +LALQ+
Sbjct:    1 MSRAVFQPVGQVRLTNVAVVRVTRTGKRFEIACYRNKVVNWRNRVETDLNEVLQITTVFQNVSKGVLANKKDMAKAFGTEDEDEIIR----YILDKGEVQVSDKERRAQYESAFRDVATIVSEKCVNPHSNRPYTVSMIENAMRDVHFAVAPNKSAKAQALELIPRLKEVMPIARASMLLRVTAPAALAQSVEASLSALGVTHFE----KQTRTEAEHSVDVLVDPGLFRGIEEALRGSGGGAARVEVLQLSVQQEGEADIDLEAARKGVLALQV 267          
BLAST of mRNA_P-wetherbeei_contig6399.1.1 vs. uniprot
Match: UPI001B88E1FB (LOW QUALITY PROTEIN: ribosome maturation protein SBDS-like n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88E1FB)

HSP 1 Score: 261 bits (667), Expect = 4.660e-84
Identity = 138/262 (52.67%), Postives = 193/262 (73.66%), Query Frame = 0
Query:    4 GVFQPITQVRLTNVAIVRLSRAGKRFEIACYRNKVVNWRNKLETDIDEVLQINSIFQNVSKGVLAKKKDILDAFGTVDETEVCKASNIVILEKGEMQVSDKERQAAMDSTFRDIATIVSEKCVDPTSNRPYTVGMIQNAMRDIHYATVATRSAKQQALDVIRQLAAVMPIARACMRLRVVADAEGGPALRAALEALGVDCGSGAGAVERRTVAEWTLDV----LVDPGLFRKVEELVREQTGGQGQVQVLQLAVQEEGEADM 261
             +F P  Q+RLTNVAIVR+ + GKRFEIACY+NKVV+WRNK+E DIDEVLQ +++F NVSKG ++K+ D++ AFGT D++E+CK     IL KGE+QVS++ERQA ++STFRDIATIV++KCV+P + RPYTVG+I+ AM+D+HYA   TR+AKQQALDVIR L   MP+ RA MR+R+V   +    +R  +++L  +       +E+    +WT ++    L+DPG +R+++ELVR +T GQG V+VL L   EEG+  +
Sbjct:    2 SIFTPTNQIRLTNVAIVRMKKGGKRFEIACYKNKVVSWRNKIEKDIDEVLQTHTVFTNVSKGQVSKRDDLVAAFGTDDQSEICKQ----ILSKGELQVSERERQAQLESTFRDIATIVADKCVNPETKRPYTVGLIERAMKDVHYAVKPTRNAKQQALDVIRLLKTHMPLERARMRMRLVLPVKEARRIREKIKSLLAN-------IEQE---DWTPNMEIICLIDPGAYREIDELVRSETKGQGTVEVLNLKDIEEGDESL 249          
BLAST of mRNA_P-wetherbeei_contig6399.1.1 vs. uniprot
Match: A0A0C9Q0K3_9HYME (Ribosome maturation protein SBDS n=2 Tax=Opiinae TaxID=68883 RepID=A0A0C9Q0K3_9HYME)

HSP 1 Score: 258 bits (660), Expect = 5.910e-83
Identity = 140/256 (54.69%), Postives = 186/256 (72.66%), Query Frame = 0
Query:    5 VFQPITQVRLTNVAIVRLSRAGKRFEIACYRNKVVNWRNKLETDIDEVLQINSIFQNVSKGVLAKKKDILDAFGTVDETEVCKASNIVILEKGEMQVSDKERQAAMDSTFRDIATIVSEKCVDPTSNRPYTVGMIQNAMRDIHYATVATRSAKQQALDVIRQLAAVMPIARACMRLRVVADAEGGPALRAALEALGVDCGSGAGAVERRTVAEWTLDV--LVDPGLFRKVEELVREQTGGQGQVQVLQLAVQEEGE 258
            +F PI Q+RLTNVA+VR+ + GKRFEIACYRNKVV+WRNKLE DIDEVLQ +++F NVSKG ++KK+D+L AFGT ++TE+CK     IL KGE+QVSDKER +A+DS F+DIAT V++KCV+P S RPY V MI+ AM+D+H++    R+AKQQAL+VI QL +VMP+ RA MRLRVV   +    LR  +  +          VE    AE TLD+  L+DPG +RK++EL+R +T G G ++++ L    EGE
Sbjct:    4 LFTPINQIRLTNVAVVRMKKQGKRFEIACYRNKVVSWRNKLEKDIDEVLQTHTVFTNVSKGQMSKKEDLLKAFGTDNQTEICKE----ILSKGELQVSDKERHSALDSMFKDIATTVADKCVNPDSKRPYPVSMIEKAMKDVHFSVKPHRNAKQQALEVIPQLKSVMPLERAQMRLRVVISGKEARKLRDKIVKMTTS-------VESENWAEGTLDLTCLIDPGNYRKIDELIRSETRGTGILELVNLKEVTEGE 248          
BLAST of mRNA_P-wetherbeei_contig6399.1.1 vs. uniprot
Match: A0A7M7R6S1_APIME (Ribosome maturation protein SBDS n=21 Tax=Apoidea TaxID=34735 RepID=A0A7M7R6S1_APIME)

HSP 1 Score: 258 bits (658), Expect = 1.310e-82
Identity = 139/259 (53.67%), Postives = 186/259 (71.81%), Query Frame = 0
Query:    5 VFQPITQVRLTNVAIVRLSRAGKRFEIACYRNKVVNWRNKLETDIDEVLQINSIFQNVSKGVLAKKKDILDAFGTVDETEVCKASNIVILEKGEMQVSDKERQAAMDSTFRDIATIVSEKCVDPTSNRPYTVGMIQNAMRDIHYATVATRSAKQQALDVIRQLAAVMPIARACMRLRVVADAEGGPALRAALEALGVDCGSGAGAVERRTVAEW---TLDV--LVDPGLFRKVEELVREQTGGQGQVQVLQLAVQEEGE 258
            +F P  Q+RLTNVA+VR+ +AGKRFEIACYRNKV++WRNKLE DIDEVLQ +++F NVSKG +AKK+D++ AFGT ++TE+CK     IL KGE+QVSDKER +A+DS F+DIAT V+ KC++P + RPYT+ MI+ AM+D+H++    R+AKQQALDVI QL AVMP+ RA MRLRV+   +    LR  +E L          V +    EW   TLD+  L+DPG +R++ ELVR +T G G +++L L    EG+
Sbjct:    7 IFTPTNQIRLTNVAVVRMKKAGKRFEIACYRNKVISWRNKLEKDIDEVLQTHTVFINVSKGQVAKKEDLIKAFGTDNQTEICKE----ILTKGELQVSDKERHSALDSMFKDIATTVANKCINPETKRPYTITMIEKAMKDVHFSVKPNRNAKQQALDVIPQLKAVMPLERAQMRLRVLVSGKEAKKLRDKIEKL----------VTKLETEEWDNGTLDLVCLIDPGHYREINELVRSETKGSGLLELLNLKEIVEGD 251          
BLAST of mRNA_P-wetherbeei_contig6399.1.1 vs. uniprot
Match: A0A7M7G5I7_NASVI (Ribosome maturation protein SBDS n=1 Tax=Nasonia vitripennis TaxID=7425 RepID=A0A7M7G5I7_NASVI)

HSP 1 Score: 257 bits (656), Expect = 2.380e-82
Identity = 138/256 (53.91%), Postives = 185/256 (72.27%), Query Frame = 0
Query:    5 VFQPITQVRLTNVAIVRLSRAGKRFEIACYRNKVVNWRNKLETDIDEVLQINSIFQNVSKGVLAKKKDILDAFGTVDETEVCKASNIVILEKGEMQVSDKERQAAMDSTFRDIATIVSEKCVDPTSNRPYTVGMIQNAMRDIHYATVATRSAKQQALDVIRQLAAVMPIARACMRLRVVADAEGGPALRAALEALGVDCGSGAGAVERRTVAEWTLDV--LVDPGLFRKVEELVREQTGGQGQVQVLQLAVQEEGE 258
            +F P+ Q+RLTNVA+VR+ +AGKRFEIACYRNKV++WRNKLE DIDEVLQ +++F NVSKG +AKK+D++ AFG  D+TE+CK     ILEKGE+QVSDKER +A+DS F+DIAT V++KCV+P S RPY+V +I+ AM+DIH++    R+AKQQAL+VI QL  VMP+ RA MRLRV+   +    LR  +  L          VE       +LD+  L+DPG +R+++ELVR +T G G +++L L    EGE
Sbjct:    4 IFTPVNQIRLTNVAVVRMKKAGKRFEIACYRNKVISWRNKLEKDIDEVLQTHTVFMNVSKGQVAKKEDLIKAFGKDDQTEICKE----ILEKGELQVSDKERHSALDSMFKDIATTVADKCVNPESKRPYSVSLIEKAMKDIHFSVKPNRNAKQQALEVITQLKTVMPLERAQMRLRVLVSGKEARKLREKIVKLTTK-------VESEDWNSGSLDLVCLIDPGHYREIDELVRAETKGSGVLELLNLKEITEGE 248          
BLAST of mRNA_P-wetherbeei_contig6399.1.1 vs. uniprot
Match: UPI000771B1AA (ribosome maturation protein SBDS n=1 Tax=Cephus cinctus TaxID=211228 RepID=UPI000771B1AA)

HSP 1 Score: 254 bits (649), Expect = 2.740e-81
Identity = 138/254 (54.33%), Postives = 180/254 (70.87%), Query Frame = 0
Query:    5 VFQPITQVRLTNVAIVRLSRAGKRFEIACYRNKVVNWRNKLETDIDEVLQINSIFQNVSKGVLAKKKDILDAFGTVDETEVCKASNIVILEKGEMQVSDKERQAAMDSTFRDIATIVSEKCVDPTSNRPYTVGMIQNAMRDIHYATVATRSAKQQALDVIRQLAAVMPIARACMRLRVVADAEGGPALRAALEALGVDCGSGAGAVERRTVAEWTLDVLVDPGLFRKVEELVREQTGGQGQVQVLQLAVQEEGE 258
            +F PI Q+RLTNVA+VR+ + GKRFEIACYRNKVV+WRNKLE DI+EVLQ +++F NVSKG +AKK+D++ AFG  D+TE+CK     ILEKGE+QVSDKER +A+DS  +DIAT V+EKCV+P + RPY V MI+ AM+DIH++    R+AKQQALDVI+QL  VMP+ RA MRLRV+   +    LR  +  L     S     E        L  L+DPG +R+++ELVR +T G G +++L L    EGE
Sbjct:    4 IFTPINQIRLTNVAVVRMKKGGKRFEIACYRNKVVSWRNKLEKDINEVLQTHTVFTNVSKGQVAKKEDLIKAFGKEDQTEICKD----ILEKGELQVSDKERHSALDSMLKDIATTVAEKCVNPETKRPYPVSMIEKAMKDIHFSVKPNRNAKQQALDVIQQLKTVMPLERAQMRLRVLITGKEARKLREKIMKLAAKVES-----EDWDSGSLNLICLIDPGQYREIDELVRSETKGHGILELLNLKEVTEGE 248          
BLAST of mRNA_P-wetherbeei_contig6399.1.1 vs. uniprot
Match: A0A4D9CZ78_9STRA (C2H2-type domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CZ78_9STRA)

HSP 1 Score: 259 bits (661), Expect = 1.810e-80
Identity = 150/269 (55.76%), Postives = 194/269 (72.12%), Query Frame = 0
Query:    1 MSRGVFQPITQVRLTNVAIVRLSRAGKRFEIACYRNKVVNWRNKLETDIDEVLQINSIFQNVSKGVLAKKKDILDAFGTVDETEVCKASNIVILEKGEMQVSDKERQAAMDSTFRDIATIVSEKCVDPTSNRPYTVGMIQNAMRDIHYATVATRSAKQQALDVIRQLAAVMPIARACMRLRVVADA-EGGPALRAALEALGVDCGSGAGAVERRTVAEWTLDVLVDPGLFRKVEELVREQTGGQGQVQVLQLAVQEEGEADMDTELARK 268
            MSR + QP+ QVRLTNVA+VR+ + GKRFEIACYRNKV++WR  +E DIDEVLQ ++IF NVSKGVLA  KD++D FG  D   + +    +ILEKGE   SDKER+A  +S +RDIATIV+ K V+PTSNRPYTV MI + M+DIH+A   TR AKQQAL+VIR+L  VMP+ RA MRL+VV    E    +   + + G+D     G     T  +  +D+LVDPGLFR+V+ELVR +  G+G + VL+L+VQ+EGEAD+D E+ARK
Sbjct:    1 MSRRIGQPVNQVRLTNVAMVRVHKGGKRFEIACYRNKVLSWRQGVEKDIDEVLQTHAIFLNVSKGVLASSKDLMDCFGQDDVEALLR----LILEKGEYHPSDKEREAMHESLYRDIATIVAIKSVNPTSNRPYTVNMILSGMKDIHFAVNPTRGAKQQALEVIRRLQDVMPLERAKMRLKVVCPTTEDLAQVVEGMASFGID-----GNTVEATGKKEEVDLLVDPGLFRRVDELVRGK--GKGALHVLELSVQQEGEADVDLEIARK 258          
BLAST of mRNA_P-wetherbeei_contig6399.1.1 vs. uniprot
Match: A0A1X7V953_AMPQE (Ribosome maturation protein SBDS n=2 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7V953_AMPQE)

HSP 1 Score: 251 bits (642), Expect = 2.940e-80
Identity = 137/259 (52.90%), Postives = 186/259 (71.81%), Query Frame = 0
Query:    4 GVFQPITQVRLTNVAIVRLSRAGKRFEIACYRNKVVNWRNKLETDIDEVLQINSIFQNVSKGVLAKKKDILDAFGTVDETEVCKASNIVILEKGEMQVSDKERQAAMDSTFRDIATIVSEKCVDPTSNRPYTVGMIQNAMRDIHYATVATRSAKQQALDVIRQLAAVMPIARACMRLRVVADAEGGPALRAALEALGVDCGSGAGAVERRTVAEWT--LDV--LVDPGLFRKVEELVREQTGGQGQVQVLQLAVQEEGE 258
             +F P  Q+RLTNVAIVR+ + GKRFEIACY+NKVV+WRNK+E DIDEVLQ +++F NVSKG +AK+ D+  AFGT D+TE+CK     IL KGE+Q+S++ERQ+ ++S FRDI+TIV++KCV+P + RPYTVGMI+ AM+D+HYA   TRSAKQQ+LDVIR L   MP+ RA MRL++V   +    +R  +  L         +VE+    +W   L++  L+DPG FR+++E+VR  T G G V+VL L   EEG+
Sbjct:    2 SIFTPTNQIRLTNVAIVRIKKGGKRFEIACYKNKVVSWRNKVEKDIDEVLQTHTVFNNVSKGQVAKRDDLASAFGTEDQTEICKT----ILSKGELQISERERQSQLESLFRDISTIVADKCVNPDTKRPYTVGMIERAMKDVHYAVKPTRSAKQQSLDVIRLLKDHMPLERARMRLKLVLPVKEARKVREKIVGL-------LASVEQE---DWRPQLEIVCLIDPGRFREIDEIVRGDTKGSGIVEVLNLKDVEEGD 246          
BLAST of mRNA_P-wetherbeei_contig6399.1.1 vs. uniprot
Match: A0A834JRM0_VESGE (Ribosome maturation protein SBDS n=4 Tax=Vespinae TaxID=7439 RepID=A0A834JRM0_VESGE)

HSP 1 Score: 251 bits (642), Expect = 3.140e-80
Identity = 138/256 (53.91%), Postives = 180/256 (70.31%), Query Frame = 0
Query:    5 VFQPITQVRLTNVAIVRLSRAGKRFEIACYRNKVVNWRNKLETDIDEVLQINSIFQNVSKGVLAKKKDILDAFGTVDETEVCKASNIVILEKGEMQVSDKERQAAMDSTFRDIATIVSEKCVDPTSNRPYTVGMIQNAMRDIHYATVATRSAKQQALDVIRQLAAVMPIARACMRLRVVADAEGGPALRAALEALGVDCGSGAGAVERRTVAEWTLDV--LVDPGLFRKVEELVREQTGGQGQVQVLQLAVQEEGE 258
            +F P  Q+RLTNVAIVR+ + GKRFEIACY+NKVV+WRNKLE DIDEVLQ +++F NVSKG +AKK+D++ +FGT D+TE+CK     IL KGE+QVSDKER  A+DS F+DIAT V++KCV+P S RPY V MI+ AM+D+H++    R+AKQQALDVI QL AVMP+ RA MRL+V    +    LR  +  L          VE       TLD+  L+DPG FR+++ELVR +T   G +++L L    EG+
Sbjct:    4 IFTPTNQIRLTNVAIVRMKKTGKRFEIACYKNKVVSWRNKLEKDIDEVLQTHTVFTNVSKGQVAKKEDLIKSFGTDDQTEICKE----ILAKGELQVSDKERHLALDSMFKDIATTVADKCVNPESKRPYPVSMIEKAMKDVHFSVKPNRNAKQQALDVIPQLKAVMPLERAQMRLKVTISGKEARKLREKIIKLATK-------VESENWDNGTLDLICLIDPGQFREIDELVRSETKRTGLLELLNLKEIAEGD 248          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6399.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JHB7_9PHAE2.950e-10663.64C2H2-type domain-containing protein n=2 Tax=Ectoca... [more]
A0A835Z759_9STRA8.560e-10463.27SBDS protein C-terminal domain-containing protein ... [more]
UPI001B88E1FB4.660e-8452.67LOW QUALITY PROTEIN: ribosome maturation protein S... [more]
A0A0C9Q0K3_9HYME5.910e-8354.69Ribosome maturation protein SBDS n=2 Tax=Opiinae T... [more]
A0A7M7R6S1_APIME1.310e-8253.67Ribosome maturation protein SBDS n=21 Tax=Apoidea ... [more]
A0A7M7G5I7_NASVI2.380e-8253.91Ribosome maturation protein SBDS n=1 Tax=Nasonia v... [more]
UPI000771B1AA2.740e-8154.33ribosome maturation protein SBDS n=1 Tax=Cephus ci... [more]
A0A4D9CZ78_9STRA1.810e-8055.76C2H2-type domain-containing protein n=2 Tax=Monodo... [more]
A0A1X7V953_AMPQE2.940e-8052.90Ribosome maturation protein SBDS n=2 Tax=Amphimedo... [more]
A0A834JRM0_VESGE3.140e-8053.91Ribosome maturation protein SBDS n=4 Tax=Vespinae ... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037188Ribosome maturation protein Sdo1/SBDS, central domain superfamilyGENE3D1.10.10.900coord: 104..176
e-value: 1.8E-29
score: 103.6
IPR037188Ribosome maturation protein Sdo1/SBDS, central domain superfamilySUPERFAMILY109728Hypothetical protein AF0491, middle domaincoord: 95..167
IPR018978Ribosome maturation protein Sdo1/SBDS, C-terminalPFAMPF09377SBDS_Ccoord: 114..236
e-value: 2.9E-29
score: 101.4
IPR019783Ribosome maturation protein Sdo1/SBDS, N-terminalPFAMPF01172SBDScoord: 16..107
e-value: 2.6E-26
score: 91.5
IPR036786Ribosome maturation protein SBDS, N-terminal domain superfamilyGENE3D3.30.1250.10coord: 2..100
e-value: 5.1E-35
score: 121.4
IPR036786Ribosome maturation protein SBDS, N-terminal domain superfamilySUPERFAMILY89895FYSH domaincoord: 12..100
IPR002140Ribosome maturation protein Sdo1/SBDSTIGRFAMTIGR00291TIGR00291coord: 11..249
e-value: 5.6E-49
score: 164.6
NoneNo IPR availableGENE3D3.30.70.240coord: 177..262
e-value: 1.2E-15
score: 59.3
NoneNo IPR availablePANTHERPTHR10927:SF1RIBOSOME MATURATION PROTEIN SBDScoord: 1..259
IPR039100Ribosome maturation protein Sdo1/SBDS-likePANTHERPTHR10927RIBOSOME MATURATION PROTEIN SBDScoord: 1..259
IPR018023Ribosome maturation protein SBDS, conserved sitePROSITEPS01267UPF0023coord: 46..65

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6399contigP-wetherbeei_contig6399:60..2440 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6399.1.1mRNA_P-wetherbeei_contig6399.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6399 60..2440 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6399.1.1 ID=prot_P-wetherbeei_contig6399.1.1|Name=mRNA_P-wetherbeei_contig6399.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=282bp
MSRGVFQPITQVRLTNVAIVRLSRAGKRFEIACYRNKVVNWRNKLETDID
EVLQINSIFQNVSKGVLAKKKDILDAFGTVDETEVCKASNIVILEKGEMQ
VSDKERQAAMDSTFRDIATIVSEKCVDPTSNRPYTVGMIQNAMRDIHYAT
VATRSAKQQALDVIRQLAAVMPIARACMRLRVVADAEGGPALRAALEALG
VDCGSGAGAVERRTVAEWTLDVLVDPGLFRKVEELVREQTGGQGQVQVLQ
LAVQEEGEADMDTELARKELLALQLGREKEGR
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037188Sdo1/SBDS_central_sf
IPR018978Ribosome_mat_Sdo1/SBDS_C
IPR019783Ribosome_mat_Sdo1/SBDS_N
IPR036786Ribosome_mat_SBDS_N_sf
IPR002140Sdo1/SBDS
IPR039100Sdo1/SBDS-like
IPR018023Ribosome_mat_SBDS_CS