mRNA_P-wetherbeei_contig6380.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6380.1.1
Unique NamemRNA_P-wetherbeei_contig6380.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6380.1.1 vs. uniprot
Match: A0A4D9D2G9_9STRA (Kinesin-like protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2G9_9STRA)

HSP 1 Score: 129 bits (324), Expect = 2.360e-32
Identity = 72/143 (50.35%), Postives = 99/143 (69.23%), Query Frame = 1
Query:    1 VVRSRLCLVDLAGSEKWDTFRELSDVHLTELAAINSSLSSLGNCVAALAARRRH-------VPYRDSKLTRLLQPSLGGNARTLFLCTLSPSAACRAETLSTLQFAERAMRVEVATVPDR--QLAPDADIEAHRREIARLRQL 402
            ++RS+L L+DLAGSEKWDT ++++D H  ELA INSSL +LG C+AAL     H       +PYR+SKLTRL+Q SLGGN +T  + TLSP+A C  E++STL+FA+RA +V     P+   QLA    ++  +REI++LR L
Sbjct:   46 ILRSKLNLIDLAGSEKWDTRQDIADQHAQELANINSSLFALGRCIAALCRSTSHSTTFPTHIPYRESKLTRLIQDSLGGNTKTYIIATLSPTAECADESISTLKFADRARQVLTYVRPNEGSQLADPFLVDQLQREISQLRAL 188          
BLAST of mRNA_P-wetherbeei_contig6380.1.1 vs. uniprot
Match: A0A2R5GUJ0_9STRA (Kinesin-like protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GUJ0_9STRA)

HSP 1 Score: 129 bits (324), Expect = 4.120e-32
Identity = 75/136 (55.15%), Postives = 95/136 (69.85%), Query Frame = 1
Query:    1 VVRS-RLCLVDLAGSEKWDTFRELSDVHLTELAAINSSLSSLGNCVAALAARRR-HVPYRDSKLTRLLQPSLGGNARTLFLCTLSPSAACRAETLSTLQFAERAMRVEVATVPDRQLAPDADIEAHRREIARLRQL 402
            V+RS +L  VDLAGSEKW+  + +S+ HL E+A IN SLS LGN V AL  + R HVPYRDS+LTRLLQ SLGGN RT  +CTLSP+A C  E++STLQFA+RA +V V    +  +     +   + EIARLR+L
Sbjct:  311 VLRSAKLNFVDLAGSEKWEADQPMSEKHLKEMARINKSLSHLGNVVQALGEKNRPHVPYRDSQLTRLLQDSLGGNTRTTIICTLSPAADCTEESVSTLQFADRAKQVMVHVKANEVVDDSILLARAQTEIARLRRL 446          
BLAST of mRNA_P-wetherbeei_contig6380.1.1 vs. uniprot
Match: A0A662Y1N3_9STRA (Kinesin motor domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y1N3_9STRA)

HSP 1 Score: 129 bits (323), Expect = 5.660e-32
Identity = 76/134 (56.72%), Postives = 96/134 (71.64%), Query Frame = 1
Query:    7 RSRLCLVDLAGSEKWDTFRELSDVHLTELAAINSSLSSLGNCVAALA-ARRRHVPYRDSKLTRLLQPSLGGNARTLFLCTLSPSAACRAETLSTLQFAERAMRVEVATVPDRQLAPDADIEAH-RREIARLRQL 402
            R++L LVDLAGSEKWDT  ++ D    EL +IN SLS+LGN ++AL   RR H+PYRDSKLTRLLQ SLGGN RT+ + T+SPS +   ET+STLQFA+RA  V  A V   +L  DA + A  +REI+RL+ L
Sbjct:  562 RAKLSLVDLAGSEKWDTDIDMQDDRCKELTSINQSLSALGNVISALTNPRRTHIPYRDSKLTRLLQDSLGGNTRTVVIATISPSESALEETISTLQFADRAKCV-TARVKANELVDDAILLAQAQREISRLKLL 694          
BLAST of mRNA_P-wetherbeei_contig6380.1.1 vs. uniprot
Match: A0A1W0A2L5_9STRA (Kinesin-like protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A2L5_9STRA)

HSP 1 Score: 128 bits (321), Expect = 8.810e-32
Identity = 75/134 (55.97%), Postives = 98/134 (73.13%), Query Frame = 1
Query:    7 RSRLCLVDLAGSEKWDTFRELSDVHLTELAAINSSLSSLGNCVAALAARRR-HVPYRDSKLTRLLQPSLGGNARTLFLCTLSPSAACRAETLSTLQFAERAMRVEVATVPDRQLAPDADIEAH-RREIARLRQL 402
            R++L LVDLAGSEKWDT   +S+    EL  IN+SLS+LGN +AAL  ++R H+PYRDSKLTRLLQ SLGGN RT+ + T+SPS A   ETLSTLQFAERA ++ +  +   ++  DA + A  ++EIA+L QL
Sbjct:  268 RAKLNLVDLAGSEKWDTDIVMSNDRTRELRNINASLSALGNVIAALTDKKRTHIPYRDSKLTRLLQDSLGGNTRTIVIATISPSEAAIEETLSTLQFAERAKQISL-NIQVNEVVDDAILLARAQKEIAKLEQL 400          
BLAST of mRNA_P-wetherbeei_contig6380.1.1 vs. uniprot
Match: A0A1V9YG30_9STRA (Kinesin-like protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YG30_9STRA)

HSP 1 Score: 128 bits (321), Expect = 9.640e-32
Identity = 75/134 (55.97%), Postives = 98/134 (73.13%), Query Frame = 1
Query:    7 RSRLCLVDLAGSEKWDTFRELSDVHLTELAAINSSLSSLGNCVAALAARRR-HVPYRDSKLTRLLQPSLGGNARTLFLCTLSPSAACRAETLSTLQFAERAMRVEVATVPDRQLAPDADIEAH-RREIARLRQL 402
            R++L LVDLAGSEKWDT   +S+    EL  IN+SLS+LGN +AAL  ++R H+PYRDSKLTRLLQ SLGGN RT+ + T+SPS A   ETLSTLQFAERA ++ +  +   ++  DA + A  ++EI RL+QL
Sbjct:  265 RAKLNLVDLAGSEKWDTDIAMSNDRTRELRNINASLSALGNVIAALTDKKRSHIPYRDSKLTRLLQDSLGGNTRTIVIATISPSEAAIEETLSTLQFAERAKQISL-NIQVNEVVDDAVLLARAQKEIRRLQQL 397          
BLAST of mRNA_P-wetherbeei_contig6380.1.1 vs. uniprot
Match: A0A5A8EHQ1_CAFRO (Kinesin-like protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EHQ1_CAFRO)

HSP 1 Score: 128 bits (321), Expect = 1.050e-31
Identity = 85/144 (59.03%), Postives = 97/144 (67.36%), Query Frame = 1
Query:    1 VVRSRLCLVDLAGSEKW--DTFRELSDVHLTELAAINSSLSSLGNCVAALAARRR-HVPYRDSKLTRLLQPSLGGNARTLFLCTLSPSAACRAETLSTLQFAERAMRVEV-----ATVPDRQLAPDADIEAHR--REIARLRQL 402
            V RS++ LVDLAGSEK        LS   LTEL AIN SLS LGNCV ALA+R R HVPYRDSKLTRLLQ SLGGN +TLF+ T+SP++A   ET+STL FA+RA RVEV      T+ D  LA     EA R  RE+ R R L
Sbjct:  455 VSRSKVSLVDLAGSEKIRPHALDTLSGRRLTELTAINQSLSCLGNCVRALASRSRTHVPYRDSKLTRLLQDSLGGNCKTLFVVTISPASAHLEETMSTLHFADRAKRVEVHAERNETLDDASLARRFKAEAARLRRELVRTRGL 598          
BLAST of mRNA_P-wetherbeei_contig6380.1.1 vs. uniprot
Match: A0A7S2FM72_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FM72_9STRA)

HSP 1 Score: 117 bits (293), Expect = 3.440e-31
Identity = 63/113 (55.75%), Postives = 85/113 (75.22%), Query Frame = 1
Query:    4 VRSRLCLVDLAGSEKWDTFRELSDVHLTELAAINSSLSSLGNCVAALA--ARRR-----HVPYRDSKLTRLLQPSLGGNARTLFLCTLSPSAACRAETLSTLQFAERAMRVEV 321
            +RS+  LVDLAGSEKWD   E+ +  ++E+  IN SL +LG C+A+LA  A+++     HVPYRDSKLTRLLQ SLGGNART  + TLSP++ C +E++STL+FA+RA +V V
Sbjct:   13 LRSKFNLVDLAGSEKWDLQHEMGEERVSEMTNINLSLYTLGRCIASLAELAKKKKFIDGHVPYRDSKLTRLLQDSLGGNARTRIIATLSPASDCISESVSTLKFADRAKQVMV 125          
BLAST of mRNA_P-wetherbeei_contig6380.1.1 vs. uniprot
Match: K3X600_GLOUD (Kinesin motor domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X600_GLOUD)

HSP 1 Score: 117 bits (294), Expect = 4.550e-31
Identity = 63/106 (59.43%), Postives = 79/106 (74.53%), Query Frame = 1
Query:    7 RSRLCLVDLAGSEKWDTFRELSDVHLTELAAINSSLSSLGNCVAALA-ARRRHVPYRDSKLTRLLQPSLGGNARTLFLCTLSPSAACRAETLSTLQFAERAMRVEV 321
            R++L LVDLAGSEKWDT   + +    EL +IN SLS+LGN ++ALA ++R H+PYRDSKLTRLLQ SLGGN RT+ + T+SPS     ET+STL FA+RA  V V
Sbjct:   44 RAKLNLVDLAGSEKWDTDVAMGNDRCKELTSINQSLSALGNVISALANSKRTHIPYRDSKLTRLLQDSLGGNTRTVVIATISPSETALDETISTLMFADRAKCVMV 149          
BLAST of mRNA_P-wetherbeei_contig6380.1.1 vs. uniprot
Match: A0A662X3Y0_9STRA (Kinesin motor domain-containing protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X3Y0_9STRA)

HSP 1 Score: 126 bits (316), Expect = 4.970e-31
Identity = 76/134 (56.72%), Postives = 95/134 (70.90%), Query Frame = 1
Query:    7 RSRLCLVDLAGSEKWDTFRELSDVHLTELAAINSSLSSLGNCVAALA-ARRRHVPYRDSKLTRLLQPSLGGNARTLFLCTLSPSAACRAETLSTLQFAERAMRVEVATVPDRQLAPDADIEAH-RREIARLRQL 402
            R++L LVDLAGSEKWDT  ++      EL +IN SLS+LGN ++AL   RR HVPYRDSKLTRLLQ SLGGN RT+ + T+SPS +   ET+STLQFA+RA  V V  V   +L  DA + A  +REI+RL+ L
Sbjct:  413 RAKLSLVDLAGSEKWDTDIDMQGDRCRELTSINQSLSALGNVISALTNPRRTHVPYRDSKLTRLLQDSLGGNTRTVVIATISPSESALEETISTLQFADRAKCVAVR-VKANELVDDAILLAQAQREISRLKLL 545          
BLAST of mRNA_P-wetherbeei_contig6380.1.1 vs. uniprot
Match: W4GAC4_9STRA (Kinesin-like protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GAC4_9STRA)

HSP 1 Score: 125 bits (315), Expect = 6.570e-31
Identity = 74/132 (56.06%), Postives = 96/132 (72.73%), Query Frame = 1
Query:    7 RSRLCLVDLAGSEKWDTFRELSDVHLTELAAINSSLSSLGNCVAALAARRR-HVPYRDSKLTRLLQPSLGGNARTLFLCTLSPSAACRAETLSTLQFAERAMRVEVATVPDRQLAPDADIEAH-RREIARLR 396
            R++L LVDLAGSEKWDT   ++     EL  IN+SLS+LGN +AAL  ++R H+PYRDSKLTRLLQ SLGGN RT+ + T+SPSAA   ETLSTLQFAERA ++ +  V   ++  DA + A  +REI +L+
Sbjct:  265 RAKLNLVDLAGSEKWDTDVAMTQDRTRELRNINASLSALGNVIAALTDKKRSHIPYRDSKLTRLLQDSLGGNTRTIVIATISPSAAAVEETLSTLQFAERAKQIAL-NVQVNEVVDDAILLARAQREIQKLK 395          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6380.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4D9D2G9_9STRA2.360e-3250.35Kinesin-like protein n=1 Tax=Nannochloropsis salin... [more]
A0A2R5GUJ0_9STRA4.120e-3255.15Kinesin-like protein n=1 Tax=Hondaea fermentalgian... [more]
A0A662Y1N3_9STRA5.660e-3256.72Kinesin motor domain-containing protein n=1 Tax=No... [more]
A0A1W0A2L5_9STRA8.810e-3255.97Kinesin-like protein n=1 Tax=Thraustotheca clavata... [more]
A0A1V9YG30_9STRA9.640e-3255.97Kinesin-like protein n=1 Tax=Achlya hypogyna TaxID... [more]
A0A5A8EHQ1_CAFRO1.050e-3159.03Kinesin-like protein n=5 Tax=Cafeteria roenbergens... [more]
A0A7S2FM72_9STRA3.440e-3155.75Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
K3X600_GLOUD4.550e-3159.43Kinesin motor domain-containing protein n=1 Tax=Gl... [more]
A0A662X3Y0_9STRA4.970e-3156.72Kinesin motor domain-containing protein n=1 Tax=No... [more]
W4GAC4_9STRA6.570e-3156.06Kinesin-like protein n=5 Tax=Aphanomyces astaci Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6380contigP-wetherbeei_contig6380:211..612 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog112098.XP_008604769.1
PFAMsKinesin
Model size402
Max annot lvl2759|Eukaryota
KEGG koko:K10400
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.51e-32
EggNOG OGsCOG5059@1|root,KOG4280@2759|Eukaryota
Descriptionmicrotubule motor activity
Cds size402
COG categoryZ
BRITEko00000,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186909.0233893-CDS-P-wetherbeei_contig6380:210..6121683186909.0233893-CDS-P-wetherbeei_contig6380:210..612Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6380 211..612 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6380.1.1prot_P-wetherbeei_contig6380.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6380 211..612 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6380.1.1

>prot_P-wetherbeei_contig6380.1.1 ID=prot_P-wetherbeei_contig6380.1.1|Name=mRNA_P-wetherbeei_contig6380.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=134bp
VVRSRLCLVDLAGSEKWDTFRELSDVHLTELAAINSSLSSLGNCVAALAA
RRRHVPYRDSKLTRLLQPSLGGNARTLFLCTLSPSAACRAETLSTLQFAE
RAMRVEVATVPDRQLAPDADIEAHRREIARLRQL
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mRNA from alignment at P-wetherbeei_contig6380:211..612+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6380.1.1 ID=mRNA_P-wetherbeei_contig6380.1.1|Name=mRNA_P-wetherbeei_contig6380.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=402bp|location=Sequence derived from alignment at P-wetherbeei_contig6380:211..612+ (Phaeothamnion wetherbeei SAG_119_79)
GTCGTCCGGAGCCGCCTCTGTCTGGTGGACCTCGCCGGGAGCGAAAAGTG GGACACTTTTCGGGAGCTGAGCGATGTCCACCTGACTGAGCTGGCCGCAA TAAACTCCAGCCTCTCCAGCCTCGGCAACTGCGTCGCCGCCCTGGCCGCC CGCCGCCGCCACGTGCCCTACCGGGACTCCAAGCTGACGCGCCTGCTGCA GCCGTCGCTTGGCGGCAACGCCCGCACGCTGTTCCTCTGCACGCTGTCGC CGTCGGCGGCCTGCCGCGCCGAAACGCTCTCAACGCTGCAGTTTGCGGAA CGGGCGATGCGGGTGGAGGTGGCGACGGTGCCAGACCGCCAGCTGGCGCC GGACGCCGATATTGAAGCCCACCGGCGGGAGATTGCACGGCTGCGGCAGC TG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6380:211..612+

>mRNA_P-wetherbeei_contig6380.1.1 ID=mRNA_P-wetherbeei_contig6380.1.1|Name=mRNA_P-wetherbeei_contig6380.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=402bp|location=Sequence derived from alignment at P-wetherbeei_contig6380:211..612+ (Phaeothamnion wetherbeei SAG_119_79)
GTCGTCCGGAGCCGCCTCTGTCTGGTGGACCTCGCCGGGAGCGAAAAGTG
GGACACTTTTCGGGAGCTGAGCGATGTCCACCTGACTGAGCTGGCCGCAA
TAAACTCCAGCCTCTCCAGCCTCGGCAACTGCGTCGCCGCCCTGGCCGCC
CGCCGCCGCCACGTGCCCTACCGGGACTCCAAGCTGACGCGCCTGCTGCA
GCCGTCGCTTGGCGGCAACGCCCGCACGCTGTTCCTCTGCACGCTGTCGC
CGTCGGCGGCCTGCCGCGCCGAAACGCTCTCAACGCTGCAGTTTGCGGAA
CGGGCGATGCGGGTGGAGGTGGCGACGGTGCCAGACCGCCAGCTGGCGCC
GGACGCCGATATTGAAGCCCACCGGCGGGAGATTGCACGGCTGCGGCAGC
TG
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