prot_P-wetherbeei_contig637.3.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig637.3.1
Unique Name	prot_P-wetherbeei_contig637.3.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	868

Homology

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BLAST of mRNA_P-wetherbeei_contig637.3.1 vs. uniprot
Match: A0A0G4GM29_9ALVE (3'-5' exonuclease domain-containing protein n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4GM29_9ALVE)

HSP 1 Score: 84.7 bits (208), Expect = 6.530e-13
Identity = 54/115 (46.96%), Postives = 69/115 (60.00%), Query Frame = 0

Query:  452 CVVIGYGLEGDLKRLRESYPSVSALLSPPCYSFDVQSYAASARGVAFVGSGTWPP-----RGGLSGLAVALVRHRMDKGQQASDWGLRPLTPAQLSYAADDALVLLRLVPALMLG 561
            CVV+G+GL  DL+RLR+SYPSV+A L       D+       R VA V     PP     +GGLS +  +++  R+DKG+Q SDW  RPL+ AQL YAA DA V L +V   MLG
Sbjct: 1417 CVVVGFGLAVDLQRLRQSYPSVAAFLIEVPRVLDL-------RLVAHV---VLPPSSQKQKGGLSAVCASVLGRRVDKGEQRSDWAQRPLSEAQLEYAALDAFVCL-VVSVQMLG 1520

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BLAST of mRNA_P-wetherbeei_contig637.3.1 vs. uniprot
Match: A0A2K3DAS7_CHLRE (Uncharacterized protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DAS7_CHLRE)

HSP 1 Score: 80.5 bits (197), Expect = 8.770e-12
Identity = 64/214 (29.91%), Postives = 96/214 (44.86%), Query Frame = 0

Query:  376 PVALLQLATSESVYLIDLLQLVRPRSTDDNASDDALGVDSSGSSSRDESDGGGSGGDLAEAEAVLSALAATVFGPFCVVIGYGLEGDLKRLRESYPSVSALLSP------------------------------PCYSFDVQSYAASARGVAFVGSGTWPPRGGLSGLAVALVRHRMDKGQQASDWGLRPLTPAQLSYAADDALVLLRLVPALM 559
            PV++LQ+ T + +Y++DLLQL+RP              DS  +++ D   GGG         AV   L+A +  P  VV+G+ L+ DL RL+ESYP +     P                              PC   D+ + A + R           P+  L+ L   ++   +DK QQ SDW  RPL+ +QL+YAA D   L+ +  AL+
Sbjct:  542 PVSILQVGTRDRIYIVDLLQLLRP--------------DSPAAAADDGKRGGGRA-------AVSDFLSAVLCSPRVVVVGFQLQSDLDRLQESYPHLPCFQPPSVPAASSVRXXXXXXXXXXXXXXXAGAVVVPCMCVDLVTLARALRPDLLR-----TPQISLTRLVNMVLGKPLDKEQQRSDWAARPLSESQLAYAAADVACLVSVFDALV 729

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BLAST of mRNA_P-wetherbeei_contig637.3.1 vs. uniprot
Match: A0A8J4EZA1_9CHLO (3'-5' exonuclease domain-containing protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4EZA1_9CHLO)

HSP 1 Score: 78.6 bits (192), Expect = 4.130e-11
Identity = 80/223 (35.87%), Postives = 105/223 (47.09%), Query Frame = 0

Query:  378 ALLQLATSESVYLIDLLQLVRPRSTDDNASDDALGVDSSGSSSRDESDGGGSGGDLA------EAEAVLSALAATVFGPF-CVVIGYGLEGDLKRLRESYPSVSAL--LSPPCYSFDV-------QSYAASARGVAFVGSGTWPPRGGLSGLAVALVRHRMDKGQQASDWGLRPLTPAQLSYAADDALVLLRLVPA----LMLGPDERKAAFDSSTSLTDAAG 580
            ALLQ+AT E   L DL                AL  DS+G+++   + GG     LA      + ++VLS L    FG    +V+G+GL GDL +L  SYP V A   +      +D+       Q+ A   +    V       + GLS LA  L+   +DK  Q SDW  RPL+P QL+YAA DA VLLRL  A    L  G  ER AA  + T +   AG
Sbjct:  561 ALLQVATHEVAVLFDL---------------PALCGDSTGTAAAGAAPGGLPAAALAPPVPDLDIDSVLSPL----FGQGGALVLGFGLAGDLAKLASSYPHVVAFQQVGATLDLYDMWKAYVTAQAQATRPKNAPPVSLSARAFQAGLSTLAATLLGKPLDKAMQVSDWEARPLSPRQLTYAAQDAHVLLRLWDAFHDRLPEGLAERVAAEKTQTFVAGTAG 764

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BLAST of mRNA_P-wetherbeei_contig637.3.1 vs. uniprot
Match: A0A8J4B7Q3_9CHLO (Uncharacterized protein n=3 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4B7Q3_9CHLO)

HSP 1 Score: 78.6 bits (192), Expect = 4.860e-11
Identity = 80/223 (35.87%), Postives = 105/223 (47.09%), Query Frame = 0

Query:  378 ALLQLATSESVYLIDLLQLVRPRSTDDNASDDALGVDSSGSSSRDESDGGGSGGDLA------EAEAVLSALAATVFGPF-CVVIGYGLEGDLKRLRESYPSVSAL--LSPPCYSFDV-------QSYAASARGVAFVGSGTWPPRGGLSGLAVALVRHRMDKGQQASDWGLRPLTPAQLSYAADDALVLLRLVPA----LMLGPDERKAAFDSSTSLTDAAG 580
            ALLQ+AT E   L DL                AL  DS+G+++   + GG     LA      + ++VLS L    FG    +V+G+GL GDL +L  SYP V A   +      +D+       Q+ A   +    V       + GLS LA  L+   +DK  Q SDW  RPL+P QL+YAA DA VLLRL  A    L  G  ER AA  + T +   AG
Sbjct:  561 ALLQVATHEVAVLFDL---------------PALCGDSTGTAAAGAAPGGLPAAALAPPVPDLDIDSVLSPL----FGQGGALVLGFGLAGDLAKLASSYPHVVAFQQVGATLDLYDMWKAYVTAQAQATRPKNAPPVSLSARAFQAGLSTLAATLLGKPLDKAMQVSDWEARPLSPRQLTYAAQDAHVLLRLWDAFHDRLPEGLAERVAAEKTQTFVAGTAG 764

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BLAST of mRNA_P-wetherbeei_contig637.3.1 vs. uniprot
Match: A0A835Y198_9CHLO (Uncharacterized protein n=2 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y198_9CHLO)

HSP 1 Score: 78.6 bits (192), Expect = 4.870e-11
Identity = 69/202 (34.16%), Postives = 97/202 (48.02%), Query Frame = 0

Query:  371 GGRMEPVALLQLATSESVYLIDLLQLVRPRSTDDNASDDALGVDSSGSSSRDESDG----GGSGGDLAEAEAVLSALAATVFGPF-CVVIGYGLEGDLKRLRESYPSVSALLSPPCYSFDVQ----------SYAASARGVAFVGSGTWPPRGGLSGLAVALVRHRMDKGQQASDWGLRPLTPAQLSYAADDALVLLRLVPA 557
            GG  E  +LLQ+AT ++  L DL  L             A G    G  +RD+  G    G +  DL +++  +  +   +FGP   +VIG+GL GDL +L  SYP V+A       + D+Q          + A+  +    V       + GLS LA  L+   +DK  Q SDW  RPLT  Q++YAA DA VL+RL  A
Sbjct:  671 GGTGERASLLQIATRDAAMLFDLPALC------------AGGASGGGRPNRDQEAGSVPTGPADRDL-DSDLDIDDVLGPLFGPGGALVIGFGLSGDLSKLASSYPHVAAFRRLEA-TLDLQELWRAHLVAQAQASRPKNAPPVQLPARSMQAGLSTLAAGLLGRPLDKTMQVSDWEARPLTVRQMTYAAQDAHVLVRLYDA 858

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BLAST of mRNA_P-wetherbeei_contig637.3.1 vs. uniprot
Match: A0A835T3H5_CHLIN (Uncharacterized protein n=2 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835T3H5_CHLIN)

HSP 1 Score: 78.2 bits (191), Expect = 6.380e-11
Identity = 67/190 (35.26%), Postives = 89/190 (46.84%), Query Frame = 0

Query:  376 PVALLQLATSESVYLIDLLQLVRPRSTDDNASDDALGVDSSGSSSRDESDGGGSGGDLAEAEAVLSAL-AATVFGPFCVVIGYGLEGDLKRLRESYPSVSALLSPPCYSFDV----------QSYAASARGVAFVGSGTWPPRGGLSGLAVALVRHRMDKGQQASDWGLRPLTPAQLSYAADDALVLLRL 554
            P ALLQ+AT+E   L DL+ L  P S+               ++S                +AVL  L + T     C+V+G+GL GDL +L  SYP+V A       S DV          Q+ AA  +G   V       + GLS LA  L+   +DK  Q SDW  RPL+  Q++YAA DA VL+RL
Sbjct:  588 PAALLQVATAEWAVLFDLIALCGPGSSSXXXXXXXXXXXXXATAS--------------PLDAVLLPLFSRTPAEGGCLVLGFGLSGDLAKLSGSYPAVRAFRRVAA-SLDVWELWRAHLIAQAQAARPKGAPPVQLPARAFQAGLSTLAAGLLGQPLDKTMQVSDWEARPLSARQVTYAAQDAHVLVRL 762

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BLAST of mRNA_P-wetherbeei_contig637.3.1 vs. uniprot
Match: A0A6U6JDC2_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6JDC2_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 9.860e-11
Identity = 67/199 (33.67%), Postives = 90/199 (45.23%), Query Frame = 0

Query:  372 GRMEPVALLQLATSESVYLIDLLQLVRPRSTDDNASDDALGVDSSGSSSRDESDGGGSGGDLAEAEAVLS-ALAATVFGPFCVVIGYGLEGDLKRLRESYPSVSALLSPPCYSF-----DVQSYAASARGVAFVGSGTWPPRGGLSGLAVA---LVRHRMDKGQQASDWGLRPLTPAQLSYAADDALVLLRLVPALMLG 561
            GR  PV+ LQLAT    +L+DL  L R R  DD+                             EAE  LS AL   +  P   V+G+G+  D+ +L  SYP +S      C+       D++  A + R  A        PR  +S LA A   ++R R+DK QQ SDWG RPL+  Q+ YA  DA VL  L+  +  G
Sbjct:  664 GRDHPVSTLQLATRRRSFLVDLQTLCRQRVGDDSIPP-------------------------TEAEGRLSDALGRLLSDPDVAVVGFGIGQDIAKLAASYPHLS------CFRLFESVVDLEPLAKTVRPHA--------PRHYMSSLAKAAAIVLRRRLDKSQQCSDWGRRPLSAEQVEYALLDAAVLPLLLGEMTSG 823

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BLAST of mRNA_P-wetherbeei_contig637.3.1 vs. uniprot
Match: A0A485L881_9STRA (Aste57867_17691 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L881_9STRA)

HSP 1 Score: 76.3 bits (186), Expect = 2.140e-10
Identity = 58/180 (32.22%), Postives = 82/180 (45.56%), Query Frame = 0

Query:  375 EPVALLQLATSESVYLIDLLQLVRPRSTDDNASDDALGVDSSGSSSRDESDGGGSGGDLAEAEAVLSALAATVFGPFCVVIGYGLEGDLKRLRESYPSVSALLSPPCYSFDVQSYAASARGVAFVGSGTWPPRGGLSGLAVALVRHRMDKGQQASDWGLRPLTPAQLSYAADDALVLLRL 554
            E V L+QLA S++VY++D + L      D++ +D  L                           V + LA     P  ++ G+ + GD+ RLR +YPS+        +S  V S     R +A    G      GL+ L    +   ++K QQ SDWGLRPLTP QL YAA+DA    RL
Sbjct:  727 ERVQLIQLAFSDTVYILDAVAL------DNHGADRPL---------------------------VETVLALIFNSPRFILAGFCVAGDIHRLRATYPSLD-------HSCPVLSNCVEVRRLAVARVGDNVSSWGLAALVSTYLGQTIEKDQQCSDWGLRPLTPEQLRYAAEDAQCARRL 866

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BLAST of mRNA_P-wetherbeei_contig637.3.1 vs. uniprot
Match: A0A2K3E0R8_CHLRE (Uncharacterized protein n=2 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3E0R8_CHLRE)

HSP 1 Score: 75.1 bits (183), Expect = 5.700e-10
Identity = 64/194 (32.99%), Postives = 87/194 (44.85%), Query Frame = 0

Query:  376 PVALLQLATSESVYLIDLLQLVRPRSTDDNASDDALGVDSSGSSSRDESDGGGSGGDLAEAEAVLSALAATVFGPF-----CVVIGYGLEGDLKRLRESYPSVSALLSPPCYSFDV----------QSYAASARGVAFVGSGTWPPRGGLSGLAVALVRHRMDKGQQASDWGLRPLTPAQLSYAADDALVLLRL 554
            P ALLQ+AT++   L DL+ L  P S+                             D   A   L A+   +F        C+V+G+GL GDL +L  SYP+V+A       + DV          Q+ AA  +G   V       + GLS LA  L+   +DK  Q SDW  RPL+  Q++YAA DA VL+RL
Sbjct:  593 PAALLQVATADWAVLFDLIALCGPGSSXXXXXXXXXXXXXXXX-------------DATAATTPLDAVLLPLFSRTPAEGGCLVLGFGLSGDLAKLSGSYPAVAAFRRVAA-TLDVWELWRAHLIAQAQAARPKGAPPVQLPARAFQAGLSTLAAGLLGKPLDKTMQVSDWEARPLSARQMTYAAQDAHVLVRL 772

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BLAST of mRNA_P-wetherbeei_contig637.3.1 vs. uniprot
Match: A0A8J4FW09_9CHLO (Uncharacterized protein (Fragment) n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4FW09_9CHLO)

HSP 1 Score: 73.9 bits (180), Expect = 6.950e-10
Identity = 56/155 (36.13%), Postives = 79/155 (50.97%), Query Frame = 0

Query:  440 LSALAATVFGPF-CVVIGYGLEGDLKRLRESYPSVSAL--LSPPCYSFDV-------QSYAASARGVAFVGSGTWPPRGGLSGLAVALVRHRMDKGQQASDWGLRPLTPAQLSYAADDALVLLRLVPA----LMLGPDERKAAFDSSTSLTDAAG 580
            ++++ A +FG    +V+G+GL GDL +L  SYP V+A   +      +D+       Q+ A   R    V       + GL+ LA  L+   +DK  Q SDW  RPL+P Q++YAA DA VLLRL  A    L  G  ER AA  +   +   AG
Sbjct:   60 INSVLAPLFGQGGALVLGFGLAGDLAKLASSYPHVAAFQRVGATLDLYDMWKAYVTAQAQATRPRNAPPVSLSARAFQAGLTTLAATLLGKPLDKAMQVSDWEARPLSPRQMTYAAQDAHVLLRLWDAFHNRLPEGLAERVAAEKTQPFVAGTAG 214

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig637.3.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig637.3.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0G4GM29_9ALVE	6.530e-13	46.96	3'-5' exonuclease domain-containing protein n=1 Ta...	[more]
A0A2K3DAS7_CHLRE	8.770e-12	29.91	Uncharacterized protein n=2 Tax=Chlamydomonas rein...	[more]
A0A8J4EZA1_9CHLO	4.130e-11	35.87	3'-5' exonuclease domain-containing protein n=1 Ta...	[more]
A0A8J4B7Q3_9CHLO	4.860e-11	35.87	Uncharacterized protein n=3 Tax=Volvox africanus T...	[more]
A0A835Y198_9CHLO	4.870e-11	34.16	Uncharacterized protein n=2 Tax=Edaphochlamys deba...	[more]
A0A835T3H5_CHLIN	6.380e-11	35.26	Uncharacterized protein n=2 Tax=Chlamydomonas ince...	[more]
A0A6U6JDC2_9STRA	9.860e-11	33.67	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]
A0A485L881_9STRA	2.140e-10	32.22	Aste57867_17691 protein n=1 Tax=Aphanomyces stella...	[more]
A0A2K3E0R8_CHLRE	5.700e-10	32.99	Uncharacterized protein n=2 Tax=Chlamydomonas rein...	[more]
A0A8J4FW09_9CHLO	6.950e-10	36.13	Uncharacterized protein (Fragment) n=1 Tax=Volvox ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 275..560 e-value: 4.8E-26 score: 93.2
IPR036754	YbaK/aminoacyl-tRNA synthetase-associated domain superfamily	GENE3D	3.90.960.10		coord: 698..863 e-value: 3.6E-18 score: 67.5
IPR036754	YbaK/aminoacyl-tRNA synthetase-associated domain superfamily	SUPERFAMILY	55826	YbaK/ProRS associated domain	coord: 714..861
IPR007214	YbaK/aminoacyl-tRNA synthetase-associated domain	PFAM	PF04073	tRNA_edit	coord: 702..851 e-value: 1.3E-13 score: 51.0
IPR002562	3'-5' exonuclease domain	PFAM	PF01612	DNA_pol_A_exo1	coord: 508..558 e-value: 2.1E-7 score: 30.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 181..222
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 405..431
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 657..705
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 408..425
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..40
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..42
None	No IPR available	PANTHER	PTHR13620:SF42	EXONUCLEASE MUT-7 HOMOLOG	coord: 219..555
None	No IPR available	PANTHER	PTHR13620	3-5 EXONUCLEASE	coord: 219..555
None	No IPR available	CDD	cd04332	YbaK_like	coord: 699..852 e-value: 9.37768E-16 score: 72.9609
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 375..559

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig637	contig	P-wetherbeei_contig637:1674..4277 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig637.3.1	mRNA_P-wetherbeei_contig637.3.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig637 1619..4295 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig637.3.1 ID=prot_P-wetherbeei_contig637.3.1|Name=mRNA_P-wetherbeei_contig637.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=868bp
MPLARLPASVVGRFWTRATSSPSPPSASGSSRSSLRHQYLPYAQPPSAMD
ANELLQATFARVRHAEAARLLALLARAGELRAAEMLAKRQGCLALRAQLL
RFLCTESFGGGGSSGGGGLGGGGDSSGGLGAPGEFFSMDDLEKASGGPSR
AIGKLIRRSFAELTAEESAMMCAHAGVTAPRWRSDGAKENKGSDSATRGG
RGGDTAGKDVSGGRHGSGSGKTDKVAMVDGAACTDGLALSKAKVKLVDSL
AGLYAAHAELAAYARRWQGGDGGTAGLGDGVPAPVGLDCEWRPRHFGGAV
ASAIVADPAAATTAEAAAANAMAKTRTATAEKVAGAAAAAAAAAAAAKTA
VMTGASPFDGRPATPRGGAKGGRMEPVALLQLATSESVYLIDLLQLVRPR
STDDNASDDALGVDSSGSSSRDESDGGGSGGDLAEAEAVLSALAATVFGP
FCVVIGYGLEGDLKRLRESYPSVSALLSPPCYSFDVQSYAASARGVAFVG
SGTWPPRGGLSGLAVALVRHRMDKGQQASDWGLRPLTPAQLSYAADDALV
LLRLVPALMLGPDERKAAFDSSTSLTDAAGQLRLALAQLRSCQAIGKALA
VPTMALEPAASGPLTVQNALFYLGMDGRLLRLRGGGAARHEGSNVIRSGI
GGGRGGGGSSNGCIGGGDGDGGDEPDGAGSNTFGDEDAEDACGGGARSDP
GADSTRTAMAALADGARGVKTLALVSTANGAGAAAAAAGCTEVVAVLQIG
RRLDVSKLEALLGLAPGSLRFAAPEELAARFGHERGCLGPVGLRSQRYRT
AWVGRRGTHHHMCAEGIPIVVDAALLLRGPKLLCGGGARDVVFLTSVVEL
VRNVGAVVAGIASSEGQ*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036397	RNaseH_sf
IPR036754	YbaK/aa-tRNA-synt-asso_dom_sf
IPR007214	YbaK/aa-tRNA-synth-assoc-dom
IPR002562	3'-5'_exonuclease_dom
IPR012337	RNaseH-like_sf