mRNA_P-wetherbeei_contig6366.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6366.1.1
Unique NamemRNA_P-wetherbeei_contig6366.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6366.1.1 vs. uniprot
Match: A0A836CI68_9STRA (Glutamate synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CI68_9STRA)

HSP 1 Score: 611 bits (1575), Expect = 5.980e-217
Identity = 280/307 (91.21%), Postives = 298/307 (97.07%), Query Frame = 1
Query:    1 MDCGTPFCQTYTGCPIHNLIPEWNELVFKGAWRDAIDRLHKTNNFPEFTGRVCPAPCEGACVAGLVDGPITIKNIEYSIIDRAWEEGWVTPRIPAYRTGMNVAVVGSGPAGLAAADCLNQRGHKVTVYEREDRIGGLLVYGIPNMKLEKDTVQRRVDMLAEEGIEFVTGANIGVDVDVRDLRAANDALVLTVGSTKPRDLPVPGRDLKGVHFAMEFLTKNQKRLMLTKEGQLQSNWDQNFITAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMVNFELLPRPPDARAPGNPWPQWPKVFGVDYGHGEV 921
            MDCGTPFCQT+TGCPIHNLIPEWN+LVFKGAWRDAIDRLHKTNNFPEFTGRVCPAPCEGACVAGL+D PITIKNIEYSII+RAWEEGWVTPRIP YRTGMNVAVVGSGPAGLAAADCLNQ+GHKVTVYEREDRIGGLL+YGIPNMKL+KDTVQRRVD+LAEEGIEFVT ANIG D+DV DLRAANDALVLTVGSTKPRDLPVPGR+LKG+HFAMEFLTKNQKRL++T++G LQSNWD  F+TAEGKDVIVIGGGDTGTDCIGTSMRHRCRS+VNFELLPRPP+ARAP NPWPQWPKVFGVDYGHGEV
Sbjct:  106 MDCGTPFCQTHTGCPIHNLIPEWNDLVFKGAWRDAIDRLHKTNNFPEFTGRVCPAPCEGACVAGLIDSPITIKNIEYSIIERAWEEGWVTPRIPEYRTGMNVAVVGSGPAGLAAADCLNQKGHKVTVYEREDRIGGLLMYGIPNMKLDKDTVQRRVDLLAEEGIEFVTNANIGPDIDVNDLRAANDALVLTVGSTKPRDLPVPGRELKGIHFAMEFLTKNQKRLLMTRDGNLQSNWDAGFVTAEGKDVIVIGGGDTGTDCIGTSMRHRCRSLVNFELLPRPPNARAPTNPWPQWPKVFGVDYGHGEV 412          
BLAST of mRNA_P-wetherbeei_contig6366.1.1 vs. uniprot
Match: D7FVE7_ECTSI (Glutamate synthase (NADH/NADPH-dependent) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FVE7_ECTSI)

HSP 1 Score: 589 bits (1519), Expect = 2.020e-208
Identity = 269/307 (87.62%), Postives = 296/307 (96.42%), Query Frame = 1
Query:    1 MDCGTPFCQTYTGCPIHNLIPEWNELVFKGAWRDAIDRLHKTNNFPEFTGRVCPAPCEGACVAGLVDGPITIKNIEYSIIDRAWEEGWVTPRIPAYRTGMNVAVVGSGPAGLAAADCLNQRGHKVTVYEREDRIGGLLVYGIPNMKLEKDTVQRRVDMLAEEGIEFVTGANIGVDVDVRDLRAANDALVLTVGSTKPRDLPVPGRDLKGVHFAMEFLTKNQKRLMLTKEGQLQSNWDQNFITAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMVNFELLPRPPDARAPGNPWPQWPKVFGVDYGHGEV 921
            MDCGTPFCQT+TGCPIHNLIPEWNELVFKGAWRDAI+ LHKTNNFPEFTGRVCPAPCEGACVAGL+D P+TIK+IEYSII+RA+EEGWV PRIP +RTGMNVAVVGSGPAGLAAAD LNQ GHKVTVYEREDR+GGLL+YGIPNMKL+KDTV+RR+D+LAEEGIEFVTGANIGVDVDV D+RA+ DALVLTVGSTKPRDLPVPGR+LKGVHFAMEFLTKNQKRL++T +G+L+SNWD  FI+AEGKDVIVIGGGDTGTDCIGTSMRHRCRSMVNFELLP+PPD+RAPGNPWPQWPK+FG+DYGHGEV
Sbjct:  108 MDCGTPFCQTHTGCPIHNLIPEWNELVFKGAWRDAIENLHKTNNFPEFTGRVCPAPCEGACVAGLIDSPVTIKSIEYSIIERAFEEGWVVPRIPTHRTGMNVAVVGSGPAGLAAADQLNQMGHKVTVYEREDRVGGLLMYGIPNMKLDKDTVKRRIDLLAEEGIEFVTGANIGVDVDVNDVRASCDALVLTVGSTKPRDLPVPGRELKGVHFAMEFLTKNQKRLLMTGDGKLESNWDGGFISAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMVNFELLPQPPDSRAPGNPWPQWPKIFGIDYGHGEV 414          
BLAST of mRNA_P-wetherbeei_contig6366.1.1 vs. uniprot
Match: A0A7S3Y096_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y096_HETAK)

HSP 1 Score: 580 bits (1496), Expect = 3.500e-204
Identity = 261/307 (85.02%), Postives = 291/307 (94.79%), Query Frame = 1
Query:    1 MDCGTPFCQTYTGCPIHNLIPEWNELVFKGAWRDAIDRLHKTNNFPEFTGRVCPAPCEGACVAGLVDGPITIKNIEYSIIDRAWEEGWVTPRIPAYRTGMNVAVVGSGPAGLAAADCLNQRGHKVTVYEREDRIGGLLVYGIPNMKLEKDTVQRRVDMLAEEGIEFVTGANIGVDVDVRDLRAANDALVLTVGSTKPRDLPVPGRDLKGVHFAMEFLTKNQKRLMLTKEGQLQSNWDQNFITAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMVNFELLPRPPDARAPGNPWPQWPKVFGVDYGHGEV 921
            MDCGTPFCQT+TGCP++NLIPEWNELV+KG WRDA DRLHKTNNFPEFTGRVCPAPCEG CVAGLVD PITIKNIEYSI+DRAWEEGW+ PR+P +RTGM+VAVVGSGPAGLAAAD LNQ GHKVTVYER DR+GGLL+YGIPNMKLEK+TV+RRV +L EEGIEFVTGAN+GVDVDV DLR+ANDALVLT+GST+PRDLP+PGR+L+GVHFAMEFLTKNQKRL+LTKEG LQS WD++F++AEGKDV+VIGGGDTGTDCIGTSMRHRC+S++N ELLPRPPD RAPGNPWPQWPKVFGVDYGHGEV
Sbjct:  157 MDCGTPFCQTHTGCPVNNLIPEWNELVYKGQWRDANDRLHKTNNFPEFTGRVCPAPCEGGCVAGLVDEPITIKNIEYSIVDRAWEEGWIAPRVPPFRTGMSVAVVGSGPAGLAAADQLNQMGHKVTVYERADRVGGLLMYGIPNMKLEKETVERRVQLLREEGIEFVTGANVGVDVDVNDLRSANDALVLTIGSTQPRDLPIPGRELQGVHFAMEFLTKNQKRLLLTKEGNLQSGWDESFVSAEGKDVVVIGGGDTGTDCIGTSMRHRCKSILNLELLPRPPDQRAPGNPWPQWPKVFGVDYGHGEV 463          
BLAST of mRNA_P-wetherbeei_contig6366.1.1 vs. uniprot
Match: I2CNZ7_NANGC (Glutamate synthase (NADPH/NADH) small chain n=2 Tax=Monodopsidaceae TaxID=425072 RepID=I2CNZ7_NANGC)

HSP 1 Score: 548 bits (1412), Expect = 4.310e-192
Identity = 245/307 (79.80%), Postives = 282/307 (91.86%), Query Frame = 1
Query:    1 MDCGTPFCQTYTGCPIHNLIPEWNELVFKGAWRDAIDRLHKTNNFPEFTGRVCPAPCEGACVAGLVDGPITIKNIEYSIIDRAWEEGWVTPRIPAYRTGMNVAVVGSGPAGLAAADCLNQRGHKVTVYEREDRIGGLLVYGIPNMKLEKDTVQRRVDMLAEEGIEFVTGANIGVDVDVRDLRAANDALVLTVGSTKPRDLPVPGRDLKGVHFAMEFLTKNQKRLMLTKEGQLQSNWDQNFITAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMVNFELLPRPPDARAPGNPWPQWPKVFGVDYGHGEV 921
            MDCGTPFCQT+TGCP++NLIPEWNELV+KG WR+AIDRLHKTNNFPEFTG VCPAPCEG CVAGLVD P+TIKNIEY+I++RAWEEGW+ PRIP YR+GM+VAVVGSGP+GLAAADCLNQ GHKVTVYEREDRIGGLL+YGIPNMKL+K+ V RRVDML EEGIEFVTG ++G D+ + DLRA  DALVLT+GST PRDL VP R+  G+HFAMEFLTKNQKRLM+T+EG+L+S WD++FITAEGKDVIV+GGGDTGTDCIGTSMRHRC+S+VNFEL+PRPP+ RAP NPWPQWPK++G+DYGH EV
Sbjct:  114 MDCGTPFCQTHTGCPVNNLIPEWNELVYKGQWREAIDRLHKTNNFPEFTGLVCPAPCEGGCVAGLVDKPVTIKNIEYAIVERAWEEGWIIPRIPQYRSGMSVAVVGSGPSGLAAADCLNQMGHKVTVYEREDRIGGLLMYGIPNMKLDKEKVLRRVDMLREEGIEFVTGTHVGKDLAIEDLRANVDALVLTLGSTVPRDLRVPNREANGIHFAMEFLTKNQKRLMMTREGRLESGWDKSFITAEGKDVIVVGGGDTGTDCIGTSMRHRCKSIVNFELMPRPPNERAPHNPWPQWPKIYGMDYGHAEV 420          
BLAST of mRNA_P-wetherbeei_contig6366.1.1 vs. uniprot
Match: A0A7S2Q1R0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q1R0_9STRA)

HSP 1 Score: 540 bits (1390), Expect = 1.110e-190
Identity = 251/308 (81.49%), Postives = 278/308 (90.26%), Query Frame = 1
Query:    1 MDCGTPFCQTYTGCPIHNLIPEWNELVFKGAWRDAIDRLHKTNNFPEFTGRVCPAPCEGACVAGLVDGPITIKNIEYSIIDRAWEEGWVTPRIPAYRTGMNVAVVGSGPAGLAAADCLNQRGHKVTVYEREDRIGGLLVYGIPNMKLEKDTVQRRVDMLAEEGIEFVTGANIGVDVDVRDLRAANDALVLTVGSTKPRDLPVPGRDLKGVHFAMEFLTKNQKRLMLTKEGQLQSNWD-QNFITAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMVNFELLPRPPDARAPGNPWPQWPKVFGVDYGHGEV 921
            MDCGTPFCQT+TGCP++NLIPEWN LV+ G W DAI+RLHKTNNFPEFTGRVCPAPCEGACVAGLVD PITIK+IEYSI+D AW+EG +TPRIP  RTGM VAVVGSGPAGLAAAD LNQ GHKVTV+ER DRIGGLL+YGIPNMKLEKDTV RRV++L EEGIEFVT ANIG +VDV +LRA  DAL LT+GSTKPRDLPVPGRDLKGVHFAMEFLT+NQKRL+LTKEG L+SNWD + FITA GKDVIVIGGGDTGTDCIGTSMRHRC+S+ NFEL+P PP+ RAP NPWPQWP+V+G+DYGH EV
Sbjct:  115 MDCGTPFCQTHTGCPVNNLIPEWNNLVYNGQWSDAIERLHKTNNFPEFTGRVCPAPCEGACVAGLVDQPITIKDIEYSIVDNAWKEGLITPRIPKERTGMTVAVVGSGPAGLAAADQLNQMGHKVTVFERADRIGGLLMYGIPNMKLEKDTVDRRVNLLREEGIEFVTNANIGQNVDVNELRANFDALTLTLGSTKPRDLPVPGRDLKGVHFAMEFLTENQKRLLLTKEGTLESNWDKEKFITAAGKDVIVIGGGDTGTDCIGTSMRHRCKSVTNFELMPCPPNERAPDNPWPQWPRVYGIDYGHAEV 422          
BLAST of mRNA_P-wetherbeei_contig6366.1.1 vs. uniprot
Match: A0A7S3LHR0_9STRA (Hypothetical protein n=2 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LHR0_9STRA)

HSP 1 Score: 540 bits (1390), Expect = 2.860e-188
Identity = 247/308 (80.19%), Postives = 280/308 (90.91%), Query Frame = 1
Query:    1 MDCGTPFCQTYTGCPIHNLIPEWNELVFKGAWRDAIDRLHKTNNFPEFTGRVCPAPCEGACVAGLVDGPITIKNIEYSIIDRAWEEGWVTPRIPAYRTGMNVAVVGSGPAGLAAADCLNQRGHKVTVYEREDRIGGLLVYGIPNMKLEKDTVQRRVDMLAEEGIEFVTGANIGVDVDVRDLRAANDALVLTVGSTKPRDLPVPGRDLKGVHFAMEFLTKNQKRLMLTKEGQLQSNWD-QNFITAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMVNFELLPRPPDARAPGNPWPQWPKVFGVDYGHGEV 921
            MDCGTPFCQT+TGCP++NLIPEWN LV+ G WRDAIDRLHKTNNFPEFTGRVCPAPCEG+CVAGLVD P+TIKNIEY+I+D AW+ G++TPRIP  RTGM VAVVGSGPAGLAAAD LNQ GHKVTVYER DRIGGLL+YGIPNMKLEK+TV+RRV++L EEGIEFVT A+IG +VDV +LRA NDA+ L +G+TKPRDLPVPGRDLKGVHFAMEFLT NQKRL++TKEG L+S W+ +NFITA GKDVIVIGGGDTGTDCIGTSMRHRC+S+ NFEL+P+PP +RAP NPWPQWP+VFGVDYGH EV
Sbjct:  137 MDCGTPFCQTHTGCPVNNLIPEWNNLVYNGQWRDAIDRLHKTNNFPEFTGRVCPAPCEGSCVAGLVDSPVTIKNIEYAIVDEAWKNGYITPRIPKERTGMTVAVVGSGPAGLAAADQLNQMGHKVTVYERADRIGGLLMYGIPNMKLEKETVERRVNLLREEGIEFVTNADIGRNVDVNELRANNDAVALCMGATKPRDLPVPGRDLKGVHFAMEFLTANQKRLLMTKEGTLESKWEKENFITAAGKDVIVIGGGDTGTDCIGTSMRHRCKSVTNFELMPQPPMSRAPDNPWPQWPRVFGVDYGHAEV 444          
BLAST of mRNA_P-wetherbeei_contig6366.1.1 vs. uniprot
Match: A0A1Z5JPW8_FISSO (Glutamate synthase (NADPH/NADH) small chain n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JPW8_FISSO)

HSP 1 Score: 535 bits (1379), Expect = 6.610e-187
Identity = 245/308 (79.55%), Postives = 277/308 (89.94%), Query Frame = 1
Query:    1 MDCGTPFCQTYTGCPIHNLIPEWNELVFKGAWRDAIDRLHKTNNFPEFTGRVCPAPCEGACVAGLVDGPITIKNIEYSIIDRAWEEGWVTPRIPAYRTGMNVAVVGSGPAGLAAADCLNQRGHKVTVYEREDRIGGLLVYGIPNMKLEKDTVQRRVDMLAEEGIEFVTGANIGVDVDVRDLRAANDALVLTVGSTKPRDLPVPGRDLKGVHFAMEFLTKNQKRLMLTKEGQLQSNWD-QNFITAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMVNFELLPRPPDARAPGNPWPQWPKVFGVDYGHGEV 921
            MDCGTPFCQT+ GCP++NLIPEWN LV+ G W DAIDRLHKTNNFPEFTGRVCPAPCEG+CVAGLVD P+TIKNIEYSI+DRAW+EG +TPRIP  RTGM VAVVGSGP+GLAAAD LNQ GHKVTVYER DRIGGLL+YGIPNMKLEKDTV RRV++L EEGIEFVT ANIG +VD+ +LRA  DAL+L VGSTKPRDLPVPGR+LKG+HFAMEFLT NQK+L++TKEG L+S W+ +N+ITA GKDVIVIGGGDTGTDCIGTSMRHRC+S+ NFEL+P+PP +RAP NPWPQWP+VFGVDYGH E 
Sbjct:  114 MDCGTPFCQTHAGCPVNNLIPEWNNLVYNGQWEDAIDRLHKTNNFPEFTGRVCPAPCEGSCVAGLVDAPVTIKNIEYSIVDRAWKEGLITPRIPENRTGMTVAVVGSGPSGLAAADQLNQMGHKVTVYERADRIGGLLMYGIPNMKLEKDTVDRRVNLLREEGIEFVTNANIGQNVDINELRANVDALILCVGSTKPRDLPVPGRELKGIHFAMEFLTANQKKLLMTKEGTLESQWEKENWITAAGKDVIVIGGGDTGTDCIGTSMRHRCKSVTNFELMPQPPMSRAPDNPWPQWPRVFGVDYGHAEA 421          
BLAST of mRNA_P-wetherbeei_contig6366.1.1 vs. uniprot
Match: A0A7S2HN51_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HN51_9STRA)

HSP 1 Score: 533 bits (1372), Expect = 8.360e-187
Identity = 243/308 (78.90%), Postives = 277/308 (89.94%), Query Frame = 1
Query:    1 MDCGTPFCQTYTGCPIHNLIPEWNELVFKGAWRDAIDRLHKTNNFPEFTGRVCPAPCEGACVAGLVDGPITIKNIEYSIIDRAWEEGWVTPRIPAYRTGMNVAVVGSGPAGLAAADCLNQRGHKVTVYEREDRIGGLLVYGIPNMKLEKDTVQRRVDMLAEEGIEFVTGANIGVDVDVRDLRAANDALVLTVGSTKPRDLPVPGRDLKGVHFAMEFLTKNQKRLMLTKEGQLQSNWDQN-FITAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMVNFELLPRPPDARAPGNPWPQWPKVFGVDYGHGEV 921
            MDCGTPFCQT+TGCP++NLIPEWN+LV+K  W++AIDRLHKTNNFPEFTGRVCPAPCEGACVAGL+D P+TIKN+EYSII+RAWEEGWV PRIP YRTG++VAVVGSGPAGLAAAD LNQ GHKVTVYERED++GGLL YGIP MKLEK+ V RRVD+LAEEGIEF+TGA IGVD+DV  LRA  DALVL +GST PRDLP+  RD  G+HFAMEFLTKNQKRL LT++G+L SNW ++ FITAEGKDVIVIGGGDTGTDCIGTSMRH+C+S+VN EL+PRPPD RA  NPWP+WP+V+GVDYGH EV
Sbjct:   61 MDCGTPFCQTHTGCPVNNLIPEWNDLVYKDQWQEAIDRLHKTNNFPEFTGRVCPAPCEGACVAGLIDSPVTIKNMEYSIIERAWEEGWVVPRIPKYRTGLSVAVVGSGPAGLAAADQLNQMGHKVTVYEREDKVGGLLTYGIPEMKLEKEKVFRRVDLLAEEGIEFITGAEIGVDLDVNVLRANVDALVLAIGSTVPRDLPLENRDATGIHFAMEFLTKNQKRLFLTRDGELPSNWAKHKFITAEGKDVIVIGGGDTGTDCIGTSMRHKCKSIVNLELMPRPPDERADSNPWPEWPRVYGVDYGHAEV 368          
BLAST of mRNA_P-wetherbeei_contig6366.1.1 vs. uniprot
Match: A0A7S2WE59_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WE59_9STRA)

HSP 1 Score: 530 bits (1366), Expect = 7.350e-185
Identity = 242/308 (78.57%), Postives = 275/308 (89.29%), Query Frame = 1
Query:    1 MDCGTPFCQTYTGCPIHNLIPEWNELVFKGAWRDAIDRLHKTNNFPEFTGRVCPAPCEGACVAGLVDGPITIKNIEYSIIDRAWEEGWVTPRIPAYRTGMNVAVVGSGPAGLAAADCLNQRGHKVTVYEREDRIGGLLVYGIPNMKLEKDTVQRRVDMLAEEGIEFVTGANIGVDVDVRDLRAANDALVLTVGSTKPRDLPVPGRDLKGVHFAMEFLTKNQKRLMLTKEGQLQSNWD-QNFITAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMVNFELLPRPPDARAPGNPWPQWPKVFGVDYGHGEV 921
            MDCGTPFCQT TGCP+ NLIPEWN L++ G W DAI+RLHKTNNFPEFTGRVCPAPCEGACVAGLVD P+TIKN+EY I+DRAW++G + PRIP  R+GM VAVVGSGP+GLAAADCLNQ GHKVTVYER+DRIGGLL+YGIPNMKLEK+TV RRV++L EEGIEFVT ANIG  +DV +LR+  DAL L VG+TKPRDLPVPGR+LKGVHFAMEFLTKNQKRL++TKEG L+S+W+ +NFITA GK VIVIGGGDTGTDCIGTSMRHRC+S+VNFEL+P+PP  R P NPWPQWP+VFGVDYGH EV
Sbjct:  120 MDCGTPFCQTETGCPVSNLIPEWNNLIYNGQWGDAIERLHKTNNFPEFTGRVCPAPCEGACVAGLVDSPVTIKNMEYEIVDRAWQDGLIVPRIPKERSGMTVAVVGSGPSGLAAADCLNQMGHKVTVYERDDRIGGLLMYGIPNMKLEKETVDRRVNLLREEGIEFVTNANIGETIDVDELRSNYDALTLCVGATKPRDLPVPGRNLKGVHFAMEFLTKNQKRLLMTKEGTLESHWEKENFITAAGKSVIVIGGGDTGTDCIGTSMRHRCKSVVNFELMPQPPMEREPNNPWPQWPRVFGVDYGHAEV 427          
BLAST of mRNA_P-wetherbeei_contig6366.1.1 vs. uniprot
Match: A0A6U3PC01_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3PC01_9STRA)

HSP 1 Score: 530 bits (1366), Expect = 8.980e-185
Identity = 242/308 (78.57%), Postives = 277/308 (89.94%), Query Frame = 1
Query:    1 MDCGTPFCQTYTGCPIHNLIPEWNELVFKGAWRDAIDRLHKTNNFPEFTGRVCPAPCEGACVAGLVDGPITIKNIEYSIIDRAWEEGWVTPRIPAYRTGMNVAVVGSGPAGLAAADCLNQRGHKVTVYEREDRIGGLLVYGIPNMKLEKDTVQRRVDMLAEEGIEFVTGANIGVDVDVRDLRAANDALVLTVGSTKPRDLPVPGRDLKGVHFAMEFLTKNQKRLMLTKEGQLQSNWDQ-NFITAEGKDVIVIGGGDTGTDCIGTSMRHRCRSMVNFELLPRPPDARAPGNPWPQWPKVFGVDYGHGEV 921
            MDCGTPFCQT++GCP++NLIPEWN LV++G W DAIDRLHKTNNFPEFTGRVCPAPCEG+CVAGLVDGP+TIKNIEYSI+DRAW++G + PRIP  R+GM VAVVGSGPAGLA AD LNQ GHKVTV+ER DR+GGLL+YGIPNMKLEK+TV+RRVD+L EEGIEFVT ANIG +VD  +LRA  D++ L +GSTKPRDLPVPGR+LKGVHFAMEFLT NQKRL++TKEG L+S W++ NFITA GKDVIVIGGGDTGTDCIGTSMRHRC+S+ NFEL+P+PP  RAP NPWPQWP+VFGVDYGH EV
Sbjct:  125 MDCGTPFCQTHSGCPVNNLIPEWNNLVYQGQWADAIDRLHKTNNFPEFTGRVCPAPCEGSCVAGLVDGPVTIKNIEYSIVDRAWQDGLIQPRIPRERSGMTVAVVGSGPAGLATADQLNQMGHKVTVFERADRVGGLLMYGIPNMKLEKETVERRVDLLREEGIEFVTNANIGYNVDANELRANFDSVCLCLGSTKPRDLPVPGRELKGVHFAMEFLTANQKRLLMTKEGTLESKWEKDNFITAAGKDVIVIGGGDTGTDCIGTSMRHRCKSVTNFELMPQPPMERAPDNPWPQWPRVFGVDYGHAEV 432          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6366.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CI68_9STRA5.980e-21791.21Glutamate synthase n=1 Tax=Tribonema minus TaxID=3... [more]
D7FVE7_ECTSI2.020e-20887.62Glutamate synthase (NADH/NADPH-dependent) n=2 Tax=... [more]
A0A7S3Y096_HETAK3.500e-20485.02Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
I2CNZ7_NANGC4.310e-19279.80Glutamate synthase (NADPH/NADH) small chain n=2 Ta... [more]
A0A7S2Q1R0_9STRA1.110e-19081.49Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A7S3LHR0_9STRA2.860e-18880.19Hypothetical protein n=2 Tax=Amphora coffeiformis ... [more]
A0A1Z5JPW8_FISSO6.610e-18779.55Glutamate synthase (NADPH/NADH) small chain n=2 Ta... [more]
A0A7S2HN51_9STRA8.360e-18778.90Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2WE59_9STRA7.350e-18578.57Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A6U3PC01_9STRA8.980e-18578.57Hypothetical protein n=3 Tax=Ditylum brightwellii ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6366contigP-wetherbeei_contig6366:702..3349 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2850.Phatr20342
PFAMsFer4_20,Pyr_redox_2
Model size921
Max annot lvl2836|Bacillariophyta
KEGG rclassRC00006,RC00010,RC02799
KEGG koko:K00266
KEGG ReactionR00093,R00114,R00248
KEGG Pathwayko00250,ko00910,ko01100,ko01110,ko01120,ko01130,ko01230,map00250,map00910,map01100,map01110,map01120,map01130,map01230
Hectar predicted targeting categoryother localisation
Exons7
Evalue7.71e-184
EggNOG OGsCOG0069@1|root,KOG0399@2759|Eukaryota,2XB4G@2836|Bacillariophyta
EC1.4.1.13,1.4.1.14
DescriptionDihydroprymidine dehydrogenase domain II, 4Fe-4S cluster
Cds size921
COG categoryE
BRITEko00000,ko00001,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6366.1.1prot_P-wetherbeei_contig6366.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6366 702..3349 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186908.126009-CDS-P-wetherbeei_contig6366:701..7881683186908.126009-CDS-P-wetherbeei_contig6366:701..788Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6366 702..788 +
1683186908.1366348-CDS-P-wetherbeei_contig6366:1109..12671683186908.1366348-CDS-P-wetherbeei_contig6366:1109..1267Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6366 1110..1267 +
1683186908.150596-CDS-P-wetherbeei_contig6366:1513..16401683186908.150596-CDS-P-wetherbeei_contig6366:1513..1640Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6366 1514..1640 +
1683186908.1614203-CDS-P-wetherbeei_contig6366:1879..19901683186908.1614203-CDS-P-wetherbeei_contig6366:1879..1990Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6366 1880..1990 +
1683186908.1739538-CDS-P-wetherbeei_contig6366:2281..24231683186908.1739538-CDS-P-wetherbeei_contig6366:2281..2423Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6366 2282..2423 +
1683186908.1830652-CDS-P-wetherbeei_contig6366:2809..29161683186908.1830652-CDS-P-wetherbeei_contig6366:2809..2916Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6366 2810..2916 +
1683186908.1916368-CDS-P-wetherbeei_contig6366:3160..33491683186908.1916368-CDS-P-wetherbeei_contig6366:3160..3349Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6366 3161..3349 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6366.1.1

>prot_P-wetherbeei_contig6366.1.1 ID=prot_P-wetherbeei_contig6366.1.1|Name=mRNA_P-wetherbeei_contig6366.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=307bp
MDCGTPFCQTYTGCPIHNLIPEWNELVFKGAWRDAIDRLHKTNNFPEFTG
RVCPAPCEGACVAGLVDGPITIKNIEYSIIDRAWEEGWVTPRIPAYRTGM
NVAVVGSGPAGLAAADCLNQRGHKVTVYEREDRIGGLLVYGIPNMKLEKD
TVQRRVDMLAEEGIEFVTGANIGVDVDVRDLRAANDALVLTVGSTKPRDL
PVPGRDLKGVHFAMEFLTKNQKRLMLTKEGQLQSNWDQNFITAEGKDVIV
IGGGDTGTDCIGTSMRHRCRSMVNFELLPRPPDARAPGNPWPQWPKVFGV
DYGHGEV
back to top

mRNA from alignment at P-wetherbeei_contig6366:702..3349+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6366.1.1 ID=mRNA_P-wetherbeei_contig6366.1.1|Name=mRNA_P-wetherbeei_contig6366.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2648bp|location=Sequence derived from alignment at P-wetherbeei_contig6366:702..3349+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGACTGCGGCACGCCGTTCTGCCAGACGTACACTGGGTGCCCCATCCA CAACCTCATCCCCGAATGGAACGAACTCGTCTTCAAGGTGCGGACGATGG ACGGTGGCTCATTTAACCCGTTCGTTTCATTCGTTTGCGCTTTGCTTCGC CTGATCTATCCGTCGCTAGCCTTTTGGCTGGCCTCCAGATGTATCTGCTT GCGTTCTGGGCTGAGCTCTTTTGGCAGCGCCTCCCAGAGGCCTACATTAT GCATCGGACAAGCTTTCTCCTTTTCAGAGCATTTCTTCCTAGTCTTCTCC CTGAGGCTCTGGTCCGCTGAGATCCTGCCTGCTGTCTGTTTTGGCATGCT GCCCGGTCGATGCCTGCACCTCCGCTGCCATGCTTCGCTGCCGGCGTCGT CACTGCAGGGCGCATGGCGAGACGCGATCGATCGGCTGCACAAGACGAAC AACTTCCCCGAGTTCACGGGGCGCGTCTGCCCGGCGCCGTGCGAGGGCGC GTGCGTGGCGGGGCTTGTCGACGGACCCATTACCATCAAGAACATCGAGT ACTCTATCATCGATCGGTCAGTTTCAGGCAGTTAGCTTCGCAGTTAGTCT TAGGTGTTTAGATTTGGCGGTAGCTTTTGCGGTTTAGCTTTTGTGGTTCC TTTTCGGATTGGTGATCGTGTTCAGCTGGCAAGCTGTCTGAAAATGGATG CCAAGGTCTTTGCTGGGGCTTCTGTAATTTCCCTACCTATCATGGATTGG TGGATGCGATACTTCCGTCCTCTTCCTTTCCCGCTCTCTTCCTCTCTCAT TCTCGCGCCCAGGGCATGGGAGGAGGGGTGGGTGACGCCGCGCATCCCGG CCTACCGGACGGGCATGAACGTTGCCGTCGTCGGCTCGGGCCCCGCCGGC CTCGCTGCCGCCGACTGCCTCAACCAGCGCGGTCACAAGGTGCGTGTGCT GTTTTCTTTATCGTGCGCCCCCCTGCCTTCACCTGCGCCATTGACAAGGT TGTCACTCCCCTAACCTGTTTCTCTTCTCCTTTCCGGTCTGTTGTTTTCC GTTGTTTGTTCTTGTTCCTCTTCCTCTTTCGTCGTGTACTTCTGTCGTTG TCCAACCTGGCTTGTCCTGCCCGTCATCATCAATGTCGCCTGACCTGTTC ATTCCTCATACCTGAATCGTCTTAAAAGGTGACGGTGTACGAGCGGGAGG ACCGCATCGGGGGCTTGCTGGTCTACGGCATCCCCAACATGAAGCTTGAG AAGGACACCGTCCAGCGCCGCGTCGACATGCTCGCAGAGGTGAACCAGCA ATAACTACTTTCCAGCACCAGTGCCGCCGTTACCCCTGCTGCTTGTCTTT TGCTGTTCTTGCTGAATGAAGAGCAAGAGACAGGAGGGTTAGCGCCTTAT ATGTGTGGCTTCCTCTGCTTTTATCTTTGGCTTTCTTTGCATGGTGCGGC CGTGGTATGGTGGCGACATGGTATGGTGGGATGGACAAGGTTTTTTATCG CGATGGCTTACCCAACCCACTCCCCCAAACTCACAAACCCCGAAGCACCT CAATGTTTGAATGTCAAACGTCGATTGCAGGAGGGCATTGAATTTGTGAC AGGGGCCAACATCGGGGTGGACGTGGACGTGCGCGACCTGCGAGCGGCTA ACGATGCGCTCGTCCTCACCGTCGGCTCCACTAAGCCGCGGGACCTGCCT GTGCCCGGCCGCGACCTCAAGGGTTAGTCCGCCAGTCAGCCAGCCGGTCA TAGTGGGTCTGAAGTCATTCAAGGATTTTTTGTTTGACTTTGATGTTTCG GCCCGCTGTTGGTCGGCATTTTGTGGTGGGCGGTCCAGGTTGGGCCGGGC GGTTCTGCGGTTCCGTCAGGCATCCTTTACTTTTCTGTGGGTGGCTGCCA CGCCTCCTCCCTCAACCCCTTCCGTCTTTTGCGCCGGATGCTAACTTTGT CGCGGCGGCTAGGCCTGTGGAGTCGCATCGTTTTAGGCTGCCGACTTGCC TTACAAACTGCCCCTTTTGAAATGGCCTTGTCCTCAGACCTCCACATCAT GCTGCCATACCTAACTATCCATCATTGTGTGTCCATGTGAAAAATCGTTT CTGTGCAGGCGTGCATTTCGCGATGGAGTTCCTGACGAAGAACCAGAAAC GGCTGATGCTCACCAAGGAGGGACAGCTGCAGTCCAACTGGGACCAGAAC TTTATCACTGCCGAGGTACAACACAAACAAAGATTGTAGCAGAGACACAT CTGCCTGGAAATGGTTCAAAGTACTTCCTGCATTTCAATGAACTACTCAT CGTTTATGTGTACTGCGGTCTGAACCAGAGCTATAGTGCATTCTTTCGGG TCTTTTTATGTGTAAGTAGGTCAGAGGCCTGTCCTGACAACAGTTCAAAA CGTTTTCGACGCAATTACACTTTGGCTGCCCCTGAAAATGACGCCGATTT TTTTCTCAGGGCAAGGACGTGATTGTGATCGGCGGGGGCGACACAGGCAC GGACTGCATCGGCACGTCCATGCGGCACCGCTGCCGTAGCATGGTCAACT TTGAGCTGCTGCCGCGTCCGCCGGACGCGCGCGCTCCGGGCAACCCGTGG CCGCAGTGGCCCAAGGTCTTCGGCGTCGACTACGGTCACGGCGAGGTC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig6366:702..3349+

>mRNA_P-wetherbeei_contig6366.1.1 ID=mRNA_P-wetherbeei_contig6366.1.1|Name=mRNA_P-wetherbeei_contig6366.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=921bp|location=Sequence derived from alignment at P-wetherbeei_contig6366:702..3349+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGACTGCGGCACGCCGTTCTGCCAGACGTACACTGGGTGCCCCATCCA
CAACCTCATCCCCGAATGGAACGAACTCGTCTTCAAGGGCGCATGGCGAG
ACGCGATCGATCGGCTGCACAAGACGAACAACTTCCCCGAGTTCACGGGG
CGCGTCTGCCCGGCGCCGTGCGAGGGCGCGTGCGTGGCGGGGCTTGTCGA
CGGACCCATTACCATCAAGAACATCGAGTACTCTATCATCGATCGGGCAT
GGGAGGAGGGGTGGGTGACGCCGCGCATCCCGGCCTACCGGACGGGCATG
AACGTTGCCGTCGTCGGCTCGGGCCCCGCCGGCCTCGCTGCCGCCGACTG
CCTCAACCAGCGCGGTCACAAGGTGACGGTGTACGAGCGGGAGGACCGCA
TCGGGGGCTTGCTGGTCTACGGCATCCCCAACATGAAGCTTGAGAAGGAC
ACCGTCCAGCGCCGCGTCGACATGCTCGCAGAGGAGGGCATTGAATTTGT
GACAGGGGCCAACATCGGGGTGGACGTGGACGTGCGCGACCTGCGAGCGG
CTAACGATGCGCTCGTCCTCACCGTCGGCTCCACTAAGCCGCGGGACCTG
CCTGTGCCCGGCCGCGACCTCAAGGGCGTGCATTTCGCGATGGAGTTCCT
GACGAAGAACCAGAAACGGCTGATGCTCACCAAGGAGGGACAGCTGCAGT
CCAACTGGGACCAGAACTTTATCACTGCCGAGGGCAAGGACGTGATTGTG
ATCGGCGGGGGCGACACAGGCACGGACTGCATCGGCACGTCCATGCGGCA
CCGCTGCCGTAGCATGGTCAACTTTGAGCTGCTGCCGCGTCCGCCGGACG
CGCGCGCTCCGGGCAACCCGTGGCCGCAGTGGCCCAAGGTCTTCGGCGTC
GACTACGGTCACGGCGAGGTC
back to top