mRNA_P-wetherbeei_contig6363.1.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6363.1.3
Unique NamemRNA_P-wetherbeei_contig6363.1.3
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6363.1.3 vs. uniprot
Match: D8LL63_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LL63_ECTSI)

HSP 1 Score: 321 bits (823), Expect = 1.840e-101
Identity = 168/309 (54.37%), Postives = 206/309 (66.67%), Query Frame = 1
Query:    1 RRRNSNPAWDLSAYDGLRLRVRGDGKRYKFIVYDRSGWDSMSWCRTFDTPKDEWTDVTIPWADFVPNFRNAAMPNAPPLSTSSIFSFQLMLSKFEYNGELNPNFAAGTFRLEIDYIRAFKGLQQGEKRRFAFLPAPRAYQGGGVLPRLVHVSSAGVTRPGRPGLIVEQEPPAVRMNDMLGGLLTHKLAGEDAVRSSGIPAVIVRPCALTEEPGGAKLLVEQGDNIKGKISRDDIADLCVEALLTPLPQIAAGAGDETPSSVTLEVKSDLAFSDVWQGGADGRACERPDYATLLGGLDPAVTGKEWMQEK 927
            R RN++P  DLS YD LRLRV+GDG RYKF +YD  GW+S +WC TFDT K EW DV IP+     NFR  ++ + PP S +SI SFQLMLSKFE +G+LNPNF+AG F L I  I+A   ++  E+ + +               R VH+SSAGVTRPGRP L ++ EPPAVRMN+ML  LLT+KL GED +R SGIPA I+RPCALTEEP GA ++V QGD +KGKISRDDIA+L V +LLTP             S +T EVKSDLAFS +WQG   G       Y  +LG L+  VTGKEWM ++
Sbjct:  180 RTRNASPPLDLSEYDALRLRVKGDGNRYKFSIYDSPGWNSKAWCDTFDTVKGEWIDVDIPFTTLKYNFRTESIKDPPPFSPNSINSFQLMLSKFELDGKLNPNFSAGPFELTIASIKAVS-IETSEEMQNS---------------RFVHLSSAGVTRPGRPDLDMDTEPPAVRMNEMLSHLLTYKLKGEDVIRDSGIPATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLLTP-----------EASGLTFEVKSDLAFSTLWQGAPQGAPAR--SYGDILGPLEQGVTGKEWMGDR 459          
BLAST of mRNA_P-wetherbeei_contig6363.1.3 vs. uniprot
Match: A0A6H5KMW5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMW5_9PHAE)

HSP 1 Score: 319 bits (818), Expect = 1.980e-98
Identity = 176/334 (52.69%), Postives = 215/334 (64.37%), Query Frame = 1
Query:    1 RRRNSNPAWDLSAYDGLRLRVRGDGKRYKFIVYDRSGWDSMSWCRTFDTPKDEWTDVTIPWADFVPNFRNAAMPNAPPLSTSSIFSFQLMLSKFEYNGELNPNFAAGTFRLEIDYIRAFKGLQQGEKRRFAFLPAPRAYQGGGVLPRLVHVSSAGVTRPGRPGLIVEQEPPAVRMNDMLGGLLTHKLAGEDAVRSSGIPAVIVRPCALTEEPGGAKLLVEQGDNIKGKISRDDIADLCVEALLTPLPQIAAGAGDETPSSVTLEVKSDLAFSDVWQGGADGRACERPDYATLLGGLDPAVTGKEWMQEK*REGDGREAATSVCDK*G*RRRSFR 1002
            R RN++P  DLSAYD LRLRV+GDG RYKF +YD  GW+S +WC TFDT K EW DV IP++    NFR  ++ + PP S  SI SFQLMLSKFE +G+LNPNF+AG F L    I+A   ++  E+R+ +               RLVH+SSAGVTRPGRP L ++ EPPAVRMN+ML  LLT+KL GED +R SGIPA I+RPCALTEEP GA ++V QGD +KGKISRDDIA+L V +LLTP             S +T EVKSDLAFS +W+G   G       Y  +LG L+  VTGKE         DGR+      D  G R+RS R
Sbjct:  363 RTRNASPPLDLSAYDALRLRVKGDGNRYKFSIYDSPGWNSKAWCDTFDTVKGEWMDVDIPFSTLKYNFRTESVKDPPPFSPDSIHSFQLMLSKFELDGKLNPNFSAGPFELTTSSIKAVS-IETAEERQNS---------------RLVHLSSAGVTRPGRPDLDIDTEPPAVRMNEMLSYLLTYKLKGEDVIRDSGIPATIIRPCALTEEPAGAPMIVGQGDYLKGKISRDDIAELAVSSLLTP-----------EASGLTFEVKSDLAFSTLWEGAPQGTPAR--SYGDILGPLEQGVTGKEV--------DGRQ------DSGGRRKRSPR 653          
BLAST of mRNA_P-wetherbeei_contig6363.1.3 vs. uniprot
Match: A0A0G4FWF9_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4FWF9_VITBC)

HSP 1 Score: 285 bits (730), Expect = 4.090e-87
Identity = 158/306 (51.63%), Postives = 195/306 (63.73%), Query Frame = 1
Query:    1 RRRNSNPAWDLSAYDGLRLRVRGDGKRYKFIVYDRSGWDSMSWCRTFDTPKDEWTDVTIPWADFVPNFRNAAMPN-APPLSTSSIFSFQLMLSKFEYNGELNPNFAAGTFRLEIDYIRAFKGLQQGEKRRFAFLPAPRAYQGGGVLPRLVHVSSAGVTRPGRPGLIVEQEPPAVRMNDMLGGLLTHKLAGEDAVRSSGIPAVIVRPCALTEEPGGAKLLVEQGDNIKGKISRDDIADLCVEALLTPLPQIAAGAGDETPSSVTLEVKSDLAFSDVWQGGADGRACERP--DYATLLGGLDPAVTGK 909
            R R  +P  DLSAY+GLRLR++GDG RYK  + D +GWDS SW   FDT KDEW  V +P++DFV NFRN    + +  L T+ I+S QLMLSKFE++GELNP+F  G FRL +  + A+              P   A       PRL+ VSSAGVTRPGRPGL +E+EPPAVRMNDMLGG+LT+KL GED VR SG+   ++RPCALTEEP GA L + QGD IKGKISR+D+ADL V +LLTP             ++ T E+K  L FS+ WQ  AD    ERP   +A LL      + GK
Sbjct:  231 RTRKFDPPLDLSAYEGLRLRIKGDGSRYKMQIRDNAGWDSPSWGMGFDTVKDEWVTVDLPFSDFVQNFRNMKTKDPSAKLKTNEIYSLQLMLSKFEFDGELNPSFTPGKFRLVVQSMEAY--------------PDESAKS-----PRLIQVSSAGVTRPGRPGLDLEKEPPAVRMNDMLGGILTYKLKGEDVVRDSGVTYSVIRPCALTEEPAGAPLQIGQGDEIKGKISREDVADLVVASLLTP-----------AAANKTYEIKCTLPFSEPWQPKADAPR-ERPLTFWAELLEPTKTGIDGK 505          
BLAST of mRNA_P-wetherbeei_contig6363.1.3 vs. uniprot
Match: A0A7S2UWN3_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWN3_9STRA)

HSP 1 Score: 285 bits (729), Expect = 4.150e-87
Identity = 142/303 (46.86%), Postives = 200/303 (66.01%), Query Frame = 1
Query:    1 RRRNSNPAWDLSAYDGLRLRVRGDGKRYKFIVYDRSGWDSMSWCRTFDTPKDEWTDVTIPWADFVPNFRNAAMPNAPPLSTSSIFSFQLMLSKFEYNGELNPNFAAGTFRLEIDYIRAFKGLQQGEKRRFAFLPAPRAYQGGGVLPRLVHVSSAGVTRPGRPGLIVEQEPPAVRMNDMLGGLLTHKLAGEDAVRSSGIPAVIVRPCALTEEPGGAKLLVEQGDNIKGKISRDDIADLCVEALLTPLPQIAAGAGDETPSSVTLEVKSDLAFSDVWQGGADGRACERPDYATLLGGLDPAVTGK 909
            R RN +P  DLS++DG+ +R++GDG RYK ++ D + WD +SWC +FDT   +W DV IP+ DF+P  R+ ++   P L T+ I++FQ+ LSKFEY+G LNPNF AG+F L +D I+A++ +                      +PR++++SSAGVTRPGRPG+ ++QEPPAVRMND LGG+LT KL GED +R SG+P  ++RPCALTEEP GA L+VEQGDN+KGKISR+ +A+  + AL  P       A D+T      E+KS++ FS+V+Q   +       D+ +L   L P +TGK
Sbjct:  233 RTRNLDPPLDLSSFDGIEMRLKGDGNRYKLMLRDETRWDGISWCYSFDTEAGKWMDVRIPFKDFIPTLRSNSISGGPQLRTTEIYAFQITLSKFEYDGSLNPNFTAGSFSLVLDSIKAYERVS---------------------VPRVIYLSSAGVTRPGRPGIQLDQEPPAVRMNDALGGILTAKLKGEDCLRDSGLPYCVMRPCALTEEPRGAPLVVEQGDNMKGKISRESVAEAVIAALQAP------DAKDKT-----FEIKSNVPFSEVFQTD-ENTPLLATDFPSLFADLSPEITGK 502          
BLAST of mRNA_P-wetherbeei_contig6363.1.3 vs. uniprot
Match: A0A2V0NW80_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NW80_9CHLO)

HSP 1 Score: 283 bits (725), Expect = 1.760e-85
Identity = 161/304 (52.96%), Postives = 190/304 (62.50%), Query Frame = 1
Query:    7 RNSNPAWDLSAYDGLRLRVRGDGKRYKFIVYDRSGWDSMSWCRTFDTPKDEWTDVTIPWADFVPNFRNAAMP--NAPPLSTSSIFSFQLMLSKFEYNGELNPNFAAGTFRLEIDYIRAFKGLQQGEKRRFAFLPAPRAYQGGGVLPRLVHVSSAGVTRPGRPGLIVEQEPPAVRMNDMLGGLLTHKLAGEDAVRSSGIPAVIVRPCALTEEPGGAKLLVEQGDNIKGKISRDDIADLCVEALLTPLPQIAAGAGDETPSSVTLEVKSDLAFSDVWQGGADGRACERPDYATLLG-GLDPAVTGK 909
            RN  P  DL AY GLR+R++GDG RYK  +   SGWD + +C +FDT   EW  V +P+ADF P FR   +   +A PL  S+++S QLMLSKFEY+GELNP FAAG F L I  I A+             L +P       V PRLVHVSSAGVTRP RPG+ VEQEPPAV++ND LGGLLT KLAGEDAVR  G+PA +VRPCALTEEP G  + ++QGD IKGKI RDD+A+LCV  L  P    AAGA        T E+KS + FS  W       A  R   A L G GL   VTGK
Sbjct:  295 RNWEPPLDLGAYQGLRIRLKGDGLRYKVTLRTDSGWDGVGYCCSFDTAAGEWQSVELPFADFFPVFRARRVRGGDAKPLDPSTVYSLQLMLSKFEYDGELNPAFAAGPFELPITEISAY-------------LASP-------VTPRLVHVSSAGVTRPNRPGIDVEQEPPAVKLNDALGGLLTWKLAGEDAVRGCGVPAAVVRPCALTEEPRGMPVQIDQGDTIKGKIGRDDVAELCVALLDCPA---AAGA--------TFEIKSTVPFSQPWTADDSAAAPARDWGAVLAGSGLAAGVTGK 567          
BLAST of mRNA_P-wetherbeei_contig6363.1.3 vs. uniprot
Match: A0A250XHA8_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XHA8_9CHLO)

HSP 1 Score: 283 bits (725), Expect = 3.850e-85
Identity = 155/307 (50.49%), Postives = 195/307 (63.52%), Query Frame = 1
Query:    1 RRRNSNPAWDLSAYDGLRLRVRGDGKRYKFIVYDRSGWDSMSWCRTFDTPKDEWTDVTIPWADFVPNFRNAAMPNAPPLSTSSIFSFQLMLSKFEYNGELNPNFAAGTFRLEIDYIRAFKGLQQGEKRRFAFLPAPRAYQGGGVLPRLVHVSSAGVTRPGRPGLIVEQEPPAVRMNDMLGGLLTHKLAGEDAVRSSGIPAVIVRPCALTEEPGGAKLLVEQGDNIKGKISRDDIADLCVEALLTPLPQIAAGAGDETPSSVTLEVKSDLAFSDVWQG---GADGRACERPDYATLLGG-LDPAVTGK 909
            R RN +PA DL AY GL LR++GDG+RYK I+    GWDS+++C +FDT    W  + IP+++F P FR   + +A  L  + ++S QLMLSKFEY+GELNPNF+AG F L I  I A+  L Q +                   P++VHVSSAGVTRP RPG+ +E+EPPAVRMNDMLGG+LT KLAGED +RSSG+P  +VRPCALTEEP GA LL++QGD IKGKISR+D+A+LC   L  P              + T E+KS + FS  W G   GA      R     LLG  L+P VTGK
Sbjct:  330 RSRNFDPALDLGAYHGLELRLKGDGQRYKLILRTDPGWDSIAYCYSFDTQAGSWQTLRIPFSEFFPVFRAKRLKDASGLDPTKLYSVQLMLSKFEYDGELNPNFSAGEFSLPITRIAAY--LSQTDA------------------PKVVHVSSAGVTRPNRPGVKLEEEPPAVRMNDMLGGILTFKLAGEDVLRSSGLPYAVVRPCALTEEPAGAPLLLDQGDTIKGKISREDVAELCCVLLSQP-----------AALNCTFEIKSTIPFSQAWDGSLAGAGEPIVGRDWNKLLLGSALEPGVTGK 605          
BLAST of mRNA_P-wetherbeei_contig6363.1.3 vs. uniprot
Match: A0A6H1TX18_9CYAN (NAD(P)H-binding protein n=2 Tax=Oxynema TaxID=1492710 RepID=A0A6H1TX18_9CYAN)

HSP 1 Score: 278 bits (710), Expect = 2.410e-84
Identity = 140/245 (57.14%), Postives = 174/245 (71.02%), Query Frame = 1
Query:    1 RRRNSNPAWDLSAYDGLRLRVRGDGKRYKFIVYDRSGWDSMSWCRTFDTPKDEWTDVTIPWADFVPNFRNAAMPNAPPLSTSSIFSFQLMLSKFEYNGELNPNFAAGTFRLEIDYIRAFKGLQQGEKRRFAFLPAPRAYQGGGVLPRLVHVSSAGVTRPGRPGLIVEQEPPAVRMNDMLGGLLTHKLAGEDAVRSSGIPAVIVRPCALTEEPGGAKLLVEQGDNIKGKISRDDIADLCVEALLTP 735
            R RN +P  DLSAY G+ LRV+GDGKRYKFI+ + S WDS S+C +FDT  + W  V IP++D +P FR   + NAPP    +I+S QLMLSKFEY+GELNP F  G F+L+++ I A+ G Q+                     P+ VHVSSAGVTRPGRP L +E+EPPAVRMND LGG+LT KL GED +R+SGIP  IVRPCALTEEPGG  L+ ++GDNIKGK+SR+DIA+LCV+AL  P
Sbjct:  241 RTRNFDPPLDLSAYQGIDLRVKGDGKRYKFILRNESQWDSRSYCYSFDTVSNIWFTVRIPFSDLIPVFRAKTVNNAPPFDPKTIYSIQLMLSKFEYDGELNPKFEPGFFQLQVESISAY-GAQEK--------------------PQFVHVSSAGVTRPGRPDLNLEEEPPAVRMNDQLGGILTWKLRGEDVIRASGIPYTIVRPCALTEEPGGKDLIFDRGDNIKGKVSREDIAELCVQALENP 464          
BLAST of mRNA_P-wetherbeei_contig6363.1.3 vs. uniprot
Match: UPI001882F2AA (CIA30 family protein n=1 Tax=unclassified Coleofasciculus TaxID=2692782 RepID=UPI001882F2AA)

HSP 1 Score: 275 bits (703), Expect = 2.180e-83
Identity = 138/266 (51.88%), Postives = 182/266 (68.42%), Query Frame = 1
Query:    1 RRRNSNPAWDLSAYDGLRLRVRGDGKRYKFIVYDRSGWDSMSWCRTFDTPKDEWTDVTIPWADFVPNFRNAAMPNAPPLSTSSIFSFQLMLSKFEYNGELNPNFAAGTFRLEIDYIRAFKGLQQGEKRRFAFLPAPRAYQGGGVLPRLVHVSSAGVTRPGRPGLIVEQEPPAVRMNDMLGGLLTHKLAGEDAVRSSGIPAVIVRPCALTEEPGGAKLLVEQGDNIKGKISRDDIADLCVEALLTPLPQIAAGAGDETPSSVTLEVK 798
            R RN +P+ +L+ Y+G+ LRV+GDG+RYKFI+   + WD +S+C +FDT KD W +V IP+ D +P FR   + +A P  +S I++ QLMLSKFEY+G LNP+F  G F L+++ I+A+                     GG +LP+ + +SSAGVTRPGRPG+ +E EPPAVRMND LGG+LT KL GEDAVR SG+P  I+RPCALTEEPG   L+ EQGDNI+GK+SR+DIA+LCV+AL  PL            S+VT EVK
Sbjct:  237 RTRNFDPSVNLAGYEGIELRVKGDGQRYKFILRTEARWDGISYCFSFDTQKDHWINVRIPFDDLIPVFRAKTLQDAEPFDSSHIYAVQLMLSKFEYDGALNPHFQPGGFALQVETIKAY---------------------GGAILPQFMMISSAGVTRPGRPGINLEDEPPAVRMNDQLGGILTWKLRGEDAVRESGLPYTIIRPCALTEEPGSKGLVFEQGDNIRGKVSREDIAELCVQALEQPLA-----------SNVTFEVK 470          
BLAST of mRNA_P-wetherbeei_contig6363.1.3 vs. uniprot
Match: UPI00047D0CCA (CIA30 family protein n=1 Tax=Fischerella sp. PCC 9605 TaxID=1173024 RepID=UPI00047D0CCA)

HSP 1 Score: 274 bits (700), Expect = 6.780e-83
Identity = 140/278 (50.36%), Postives = 186/278 (66.91%), Query Frame = 1
Query:    1 RRRNSNPAWDLSAYDGLRLRVRGDGKRYKFIVYDRSGWDSMSWCRTFDTPKDEWTDVTIPWADFVPNFRNAAMPNAPPLSTSSIFSFQLMLSKFEYNGELNPNFAAGTFRLEIDYIRAFKGLQQGEKRRFAFLPAPRAYQGGGVLPRLVHVSSAGVTRPGRPGLIVEQEPPAVRMNDMLGGLLTHKLAGEDAVRSSGIPAVIVRPCALTEEPGGAKLLVEQGDNIKGKISRDDIADLCVEALLTPLPQIAAGAGDETPSSVTLEVKS--DLAFSDVWQ 828
            R +N +PA++L+ Y+G+ LRVRGDGKRYKF +   + WD + +  +FDT  + W DV IP+AD +P FR   + ++PP+  S I SFQLMLSKFEY+GELNP+F+ G F L+++ I+A+                     GG  LP+ + VSSAGVTRPGRPG+ +E+EPPAVR+ND LGG+LT KL GED++R SGIP  I+RPCALTEEPGG  L+ EQGDNI+GKISR+D+A++CV+ L  P              +VT EVK   + A S  WQ
Sbjct:  239 RTKNFSPAFNLTGYEGIELRVRGDGKRYKFFLRTDTRWDGVGYSYSFDTVANTWIDVRIPFADLIPVFRAKTLQDSPPIDASKISSFQLMLSKFEYDGELNPHFSTGGFTLQLESIKAY---------------------GGETLPQFILVSSAGVTRPGRPGINLEEEPPAVRLNDQLGGILTWKLRGEDSLRESGIPYTIIRPCALTEEPGGKSLIFEQGDNIRGKISREDVAEICVQVLQQP-----------QACNVTFEVKEGENHANSIDWQ 484          
BLAST of mRNA_P-wetherbeei_contig6363.1.3 vs. uniprot
Match: K9VH66_9CYAN (NADH:ubiquinone oxidoreductase complex I intermediate-associated protein 30 n=14 Tax=Cyanobacteria TaxID=1117 RepID=K9VH66_9CYAN)

HSP 1 Score: 273 bits (699), Expect = 7.890e-83
Identity = 144/278 (51.80%), Postives = 182/278 (65.47%), Query Frame = 1
Query:    1 RRRNSNPAWDLSAYDGLRLRVRGDGKRYKFIVYDRSGWDSMSWCRTFDTPKDEWTDVTIPWADFVPNFRNAAMPNAPPLSTSSIFSFQLMLSKFEYNGELNPNFAAGTFRLEIDYIRAFKGLQQGEKRRFAFLPAPRAYQGGGVLPRLVHVSSAGVTRPGRPGLIVEQEPPAVRMNDMLGGLLTHKLAGEDAVRSSGIPAVIVRPCALTEEPGGAKLLVEQGDNIKGKISRDDIADLCVEALLTPLPQIAAGAGDETPSSVTLEVKS--DLAFSDVWQ 828
            R RN +P  +L+ + GL+LRV+GDGKRYK IV   + WD + +C +FDT  + W  VT+P+ + +P FR   + +      SSIFSFQLMLSKFEY+G LNP F  G F+LE++ I+A                      GG  LPR+V VSSAGVTRPGRPG+ +E+EPPAVRMNDMLGG+LT KL GED VRSSGIP  +VRPCALTEEPGG  L+ EQGDNI+GK+SR+DIA+LCV+AL  P              +VT EVK   + +  + WQ
Sbjct:  235 RTRNFDPPLNLAGFSGLQLRVKGDGKRYKLIVRSEAKWDGIGYCYSFDTVYNIWITVTVPFDELIPVFRAKTVKDGSKFDASSIFSFQLMLSKFEYDGALNPKFTPGIFQLELESIKA---------------------DGGQTLPRVVMVSSAGVTRPGRPGINLEEEPPAVRMNDMLGGILTWKLKGEDCVRSSGIPYTVVRPCALTEEPGGKALIFEQGDNIRGKVSREDIAELCVQALEQP-----------QACNVTFEVKEGENASSPEDWQ 480          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6363.1.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LL63_ECTSI1.840e-10154.37Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KMW5_9PHAE1.980e-9852.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0G4FWF9_VITBC4.090e-8751.63Uncharacterized protein n=2 Tax=Vitrella brassicaf... [more]
A0A7S2UWN3_9STRA4.150e-8746.86Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A2V0NW80_9CHLO1.760e-8552.96Uncharacterized protein n=1 Tax=Raphidocelis subca... [more]
A0A250XHA8_9CHLO3.850e-8550.49Uncharacterized protein n=1 Tax=Chlamydomonas eust... [more]
A0A6H1TX18_9CYAN2.410e-8457.14NAD(P)H-binding protein n=2 Tax=Oxynema TaxID=1492... [more]
UPI001882F2AA2.180e-8351.88CIA30 family protein n=1 Tax=unclassified Coleofas... [more]
UPI00047D0CCA6.780e-8350.36CIA30 family protein n=1 Tax=Fischerella sp. PCC 9... [more]
K9VH66_9CYAN7.890e-8351.80NADH:ubiquinone oxidoreductase complex I intermedi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6363contigP-wetherbeei_contig6363:2..3256 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LL63
PFAMsCIA30,NAD_binding_10
Model size1462
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons8
Evalue1.05e-83
EggNOG OGsCOG0702@1|root,KOG1203@2759|Eukaryota
Ec32 ortholog descriptionNADH:ubiquinone oxidoreductase intermediate-associated protein 30
Ec32 orthologEc-25_000150.1
Descriptiondivinyl chlorophyllide a 8-vinyl-reductase activity
Cds size810
COG categoryGM
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6363.1.3prot_P-wetherbeei_contig6363.1.3Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6363 534..3136 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186907.7673142-UTR-P-wetherbeei_contig6363:1..5331683186907.7673142-UTR-P-wetherbeei_contig6363:1..533Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6363 2..533 -
1683186907.8829331-UTR-P-wetherbeei_contig6363:3136..32561683186907.8829331-UTR-P-wetherbeei_contig6363:3136..3256Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6363 3137..3256 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186907.8111176-CDS-P-wetherbeei_contig6363:533..6421683186907.8111176-CDS-P-wetherbeei_contig6363:533..642Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6363 534..642 -
1683186907.8201456-CDS-P-wetherbeei_contig6363:978..11151683186907.8201456-CDS-P-wetherbeei_contig6363:978..1115Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6363 979..1115 -
1683186907.8290634-CDS-P-wetherbeei_contig6363:1410..14641683186907.8290634-CDS-P-wetherbeei_contig6363:1410..1464Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6363 1411..1464 -
1683186907.838101-CDS-P-wetherbeei_contig6363:1742..17961683186907.838101-CDS-P-wetherbeei_contig6363:1742..1796Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6363 1743..1796 -
1683186907.8471575-CDS-P-wetherbeei_contig6363:1957..20291683186907.8471575-CDS-P-wetherbeei_contig6363:1957..2029Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6363 1958..2029 -
1683186907.85894-CDS-P-wetherbeei_contig6363:2243..23661683186907.85894-CDS-P-wetherbeei_contig6363:2243..2366Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6363 2244..2366 -
1683186907.8671663-CDS-P-wetherbeei_contig6363:2562..27301683186907.8671663-CDS-P-wetherbeei_contig6363:2562..2730Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6363 2563..2730 -
1683186907.875161-CDS-P-wetherbeei_contig6363:3043..31361683186907.875161-CDS-P-wetherbeei_contig6363:3043..3136Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6363 3044..3136 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6363.1.3

>prot_P-wetherbeei_contig6363.1.3 ID=prot_P-wetherbeei_contig6363.1.3|Name=mRNA_P-wetherbeei_contig6363.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=270bp
MSWCRTFDTPKDEWTDVTIPWADFVPNFRNAAMPNAPPLSTSSIFSFQLM
LSKFEYNGELNPNFAAGTFRLEIDYIRAFKGLQQGEKRRFAFLPAPRAYQ
GGGVLPRLVHVSSAGVTRPGRPGLIVEQEPPAVRMNDMLGGLLTHKLAGE
DAVRSSGIPAVIVRPCALTEEPGGAKLLVEQGDNIKGKISRDDIADLCVE
ALLTPLPQIAAGAGDETPSSVTLEVKSDLAFSDVWQGGADGRACERPDYA
TLLGGLDPAVTGKEWMQEK*
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mRNA from alignment at P-wetherbeei_contig6363:2..3256-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6363.1.3 ID=mRNA_P-wetherbeei_contig6363.1.3|Name=mRNA_P-wetherbeei_contig6363.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3255bp|location=Sequence derived from alignment at P-wetherbeei_contig6363:2..3256- (Phaeothamnion wetherbeei SAG_119_79)
CGCCGCAGGAACTCGAACCCGGCGTGGGACCTCTCTGCTTACGACGGGTT GCGGCTGCGGGTGCGCGGCGACGGGAAGCGCTACAAGTTCATCGTCTACG ACCGGTCGGGCTGGGACTCAATGTCGTGGTGCAGGACGTTTGACACGCCG AAGGACGAGTGGACGGACGTCACCATCCCGTGGGCGGACTTCGTCCCCAA CTTTCGCAACGCCGTGAGTCGACCGGGGAGACGGAGAGAAAAGAGAGAGA GAAGCACATGGTCTTGCTTTCTGGCCCCTTGTGCATTCGATTTAGGCCAG CCTGACACCGCGCACGCGATTTCTGAGGGCTTTTAGCAGCCCTCTACCAG CCGGCGGTTTCTTCTTCTTCACTCACTCATTCAGGTTTCGTGCCGCTTGT GTATTCTCGTTCCAATGGCACCTGTCATGCCATCATTCAGCCCTTTGTTC TGGTGCGCCTTACCGACCACTTTACTTTCTCAAACGTCCGCCGTCCACCA CGCCGCCGCTCTATCCCCCGCCGCAGGCCATGCCGAATGCGCCGCCGCTG TCGACATCATCTATCTTCTCCTTCCAGCTGATGCTCTCCAAGTTTGAATA CAACGGAGAGCTCAACCCAAACTTCGCAGCGGGGACATTCCGCCTCGAGA TCGACTACATCCGCGCGTTCAAGGGACTCCAACAGGGGGAGAAGGTGCGT TCAGAAACTGGAAAAGAGCACGTGTTGCTGTCAGTATTCCCTTAATCCAA GTGTGTGGCAAATGGGAGGATGCGCTTTCTCTTCTTGCTTCGATCTGAGA GAAACCTAAAAATAGAAAACAAAGAACCCTTAGTGGCTTCCGGGGCATTT CTACGCTCCTTCTTGAACTGCTGTTTCCCTTTGTTCTGAGCGCCGTTTTG CTTTCTTACCCGCTCCTCGCGCATACCAGGGCGGCGGAGTGCTGCCGCGG CTGGTGCACGTCAGCTCGGCGGGCGTGACGCGGCCGGGACGGCCGGGACT CATTGTGGAGCAAGTGAGCCCTCTCTTTTTAGTCCGATGCGGTCTGGTGC GGCCCAATATACCGTAATCGGTTCGGGAAACCTAGACGCCTAAAACCCGA CGGGTGCTATATGTCAATAATGGGCTGCTCTGAACCATCGACACAAAGCC ACTTCTTTGGCTTGTTGCGCTGCTGCCCACTGCTCTGCCGCCGCCGCTGC TGCCGCCGCCGCCGTCGCCGCCCGCAGGAGCCACCGGCGGTTCGGATGAA TGACATGCTCGGAGGTCTTCTTACGCACAAATTGGCCGGGGAAGACGCGG TAAGTACATGTTGCCAGCTTCCTGAAAACCTTTTGGACATCGCCAGTGTT TGGCGTTTAGTGTGCACCCGTCTGCCGCTTCCTGCCGCTGCCGCTGCCAT CGCTTTTGGCGCTGTTACTGCCACTGCTGACATCCCGAATCTCTAACTCT TGCGTGGCAGGTGCGTTCCAGCGGCATTCCGGCAGTGATTGTCCGACCGT GCGCCTTAACTGAGGTAAGGCAAACGGCTGGCGCATTTGTGACGGATCGA TTTTCGGTCCCACTGGTATGCTCGCAAAGTGTTTAGGCGTACGCTATCTC TCTTTCCTCGTCGTGCGGACTTCGGACGTGGTGTGGTGTGATGGTAGAGG AACATGCTGCAAACTGGTGAGGTTTTCACTTCAGCGAGGTGGCAGCGGGT GTCCACCTGCGCTTGTTTGGATCCTCACACTCACGGTCGCCTTCGTCCTC GCTCGTTTGCTGGTTGGGTTGCCACGCGTGAGGAACGAGCAGGAGCCCGG CGGCGCCAAGCTCCTGGTGGAGCAGGGGGACAACATCAAGGGCAAGGTGA GGTGCAAAAAAGTGCAGAGAAACGAGTCGAGGGTCTACGAGATGAACATC AGAAAGATCTTACCAGGCTTCGGTTTCACAAAGTGCCGTTAGGAGCAGGA TCGTGTCCAAAGGTTCCCTTCTCTCTTTCGCCAATGCTATACTGTGTATT TGTCCGATTTCTGTGAAAGCGGTAGCATATGCCTTTGCGCCCCTCGAGGT GCCCCGCCCTCCCGCTGCCCAGTTCCACATCCTCCTTTCTACGGTCTGCC CTTTCTCCTGCTCGCGGCCTTACGTTGTGAAAGGAGAGCAGATAAGCCGG GACGACATCGCAGACCTGTGCGTGGAGGCGCTGCTGACGCCGCTGCCGCA GATCGCCGCCGGTGCCGGCGACGAAACGCCGAGCAGCGTCACCCTTGAGG TCAAGAGCGACCTCGCTTTCTCCGATGTGTGAGTCCGTTTGACGAACTGT TTGGTTTGGGTTAGGTCGGGGGCTTTTGTTTGAGGCTCGGCTGTTCGTGG CAAGGTAAGTGCCAGCCAGGGCGGCAGCCGTTGAGTTAGCATTACTTCGT GACCGATTTCCAATTGTTGTACCCATCTAGTGGGAATGTCACCGAGAAGT GGCCGAATCTTAGGCAGCTTCTTCTCCTCTCTTCCTTCCCTTTCATGCTC GCGATGCGCCGGTCCGCCTCACACCGAATCCGCTCGCAATTTCCTATTTT CCTGTTTTGGGGCGAATCGGAGACTTCATTGTTCGTTGTGGGACCGCCGT GACGGCGGCAACAGGTGGCAAGGAGGCGCGGATGGCCGCGCCTGCGAACG GCCCGACTACGCCACGCTGCTCGGGGGACTCGACCCCGCGGTGACCGGCA AGGAGTGGATGCAGGAGAAGTGAAGAGAAGGCGACGGCAGAGAGGCAGCG ACTTCTGTATGTGATAAATAAGGATGACGCCGTCGATCCTTCCGTTGCTC TTGCAAAGTAACCGTGGGGGCCATAGCTCCACGTTTCTACCTACGAGCGG GAGGGACTTACCAATTCTTTGGGGCGATAGTGAAGAAAGCTGAGAGCAGC AGGCGGAAGCGTCAACGGAAGCGAAAGCAGAATAGAGAGGTAGCAAAAAG TGAGGTTTCTCCAACTTAGTTGCCACTGGATTCGTGGTTTTATGTTACGG CCAGCCTTCACCTGAGTAATGCACGCCCGTTTCCCTTTTCTGGGCTCTCA AACTCTGGCCAGCCGACCTGAGCACGGACATCAACGGGAAAGGCCGCCGA GTAAGGGTCGTGTGGATGGCAACGGCAACGCCAGCCGCCGCCACCGCCGC CGCTGTCACACCATAAGATTTTTTCCACATCACCGTTGTTGGGTACCACG GCAGCCTGATGGTGGGCATGCTGCTGGCATTGCCCCGCTGCTTCCGTCTC GGCCA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6363:2..3256-

>mRNA_P-wetherbeei_contig6363.1.3 ID=mRNA_P-wetherbeei_contig6363.1.3|Name=mRNA_P-wetherbeei_contig6363.1.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=810bp|location=Sequence derived from alignment at P-wetherbeei_contig6363:2..3256- (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGTGGTGCAGGACGTTTGACACGCCGAAGGACGAGTGGACGGACGT
CACCATCCCGTGGGCGGACTTCGTCCCCAACTTTCGCAACGCCGCCATGC
CGAATGCGCCGCCGCTGTCGACATCATCTATCTTCTCCTTCCAGCTGATG
CTCTCCAAGTTTGAATACAACGGAGAGCTCAACCCAAACTTCGCAGCGGG
GACATTCCGCCTCGAGATCGACTACATCCGCGCGTTCAAGGGACTCCAAC
AGGGGGAGAAGCGCCGTTTTGCTTTCTTACCCGCTCCTCGCGCATACCAG
GGCGGCGGAGTGCTGCCGCGGCTGGTGCACGTCAGCTCGGCGGGCGTGAC
GCGGCCGGGACGGCCGGGACTCATTGTGGAGCAAGAGCCACCGGCGGTTC
GGATGAATGACATGCTCGGAGGTCTTCTTACGCACAAATTGGCCGGGGAA
GACGCGGTGCGTTCCAGCGGCATTCCGGCAGTGATTGTCCGACCGTGCGC
CTTAACTGAGGAGCCCGGCGGCGCCAAGCTCCTGGTGGAGCAGGGGGACA
ACATCAAGGGCAAGATAAGCCGGGACGACATCGCAGACCTGTGCGTGGAG
GCGCTGCTGACGCCGCTGCCGCAGATCGCCGCCGGTGCCGGCGACGAAAC
GCCGAGCAGCGTCACCCTTGAGGTCAAGAGCGACCTCGCTTTCTCCGATG
TGTGGCAAGGAGGCGCGGATGGCCGCGCCTGCGAACGGCCCGACTACGCC
ACGCTGCTCGGGGGACTCGACCCCGCGGTGACCGGCAAGGAGTGGATGCA
GGAGAAGTGA
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