prot_P-wetherbeei_contig6362.1.2 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6362.1.2
Unique Nameprot_P-wetherbeei_contig6362.1.2
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length250
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6362.1.2 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001841Zinc finger, RING-typeSMARTSM00184ring_2coord: 87..131
e-value: 0.0074
score: 25.5
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 87..132
score: 10.173057
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 73..162
e-value: 2.0E-7
score: 32.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 85..159
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 105..114

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6362contigP-wetherbeei_contig6362:93..842 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6362.1.2mRNA_P-wetherbeei_contig6362.1.2Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6362 93..3472 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6362.1.2 ID=prot_P-wetherbeei_contig6362.1.2|Name=mRNA_P-wetherbeei_contig6362.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=250bp
MTSKDVIEIGDSDDEEIQRTAPALNSEGIDSHVDLVEVVEMVPPPPSSST
GVSSTPCASIAGGPHVSFGDGGVSSSSAGSLPFSTTCYACHENGPLDRLY
SLDPCNHKLCSHCAASAAATALTGVAACPVCKKELSVRDVRLLLSNTDWR
TLQQRRLQKFRALLAQGGASCPACLTPLPLFFGTSSQHGSTMQSRCDGSA
GVAKTACGSCGAVVCRLCRAAWTGGHACSTASLLGLEVLLRLLEQHWTTD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001841Znf_RING
IPR013083Znf_RING/FYVE/PHD
IPR017907Znf_RING_CS