mRNA_P-wetherbeei_contig636.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig636.1.1 vs. uniprot
Match: A0A835ZB47_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB47_9STRA) HSP 1 Score: 138 bits (347), Expect = 2.310e-37 Identity = 83/148 (56.08%), Postives = 103/148 (69.59%), Query Frame = 1
Query: 199 SAHSYFNEDLAATFPLSSGLVPPPSIRR----AMTPRMLLDPFAAAAAAHFISSAPLDTTQLQA--SAPLPS-LILSKTETREGLYGSYEVEVGPQQRENAAGTFKSKEATEKGKNKYSAVLGVLLVGSFIIPMVQYWWYIKDDDVDY 621
+ HS + L AT +S+ +VP + R + P MLL AAAAAA IS+AP T L+ + P+ S +LSKTETREG YG Y V+V Q+ +NA TFKSKEATEKGKNKY+AVL +LLVGSF+IPMVQYWWYI+D+DVDY
Sbjct: 2 AVHSVLSLLLVATACVSAFVVPSGGLARVSARSQAPSMLLGGVAAAAAASIISTAPASTDYLRTLHNQPVNSWTMLSKTETREGFYGEYSVDVKEQEVDNADSTFKSKEATEKGKNKYNAVLLILLVGSFVIPMVQYWWYIRDEDVDY 149
BLAST of mRNA_P-wetherbeei_contig636.1.1 vs. uniprot
Match: A0A7S2CEE7_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CEE7_9STRA) HSP 1 Score: 117 bits (294), Expect = 1.520e-29 Identity = 66/122 (54.10%), Postives = 89/122 (72.95%), Query Frame = 1
Query: 259 VPPPSIRRAMTPRM----LLDPFAAAAAAHFISSAPLDTTQLQASAPLPSLI-LSKTETREGLYGSYEVEVGPQQRENAAGTFKSKEATEKGKNKYSAVLGVLLVGSFIIPMVQYWWYIKDD 609
+P S RA+TPR L+D A AAAA +SS P+DT+ L A +P ++ +K ET+EG+YG Y+VEV Q ++A TFKS +AT+KGKNKY AVLGVLLVGSF+IPM+QY+WY+++D
Sbjct: 21 LPRASFNRAVTPRAVPVALVDVAAGAAAAAVLSSQPMDTSMLSNMANVPMMVSATKYETKEGIYGEYQVEVKEQAVDDARSTFKSAKATKKGKNKYVAVLGVLLVGSFLIPMLQYFWYVRED 142
BLAST of mRNA_P-wetherbeei_contig636.1.1 vs. uniprot
Match: D8LTU5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTU5_ECTSI) HSP 1 Score: 114 bits (285), Expect = 5.370e-28 Identity = 64/118 (54.24%), Postives = 81/118 (68.64%), Query Frame = 1
Query: 271 SIRRAMTPRMLLD--PFAAAAAAHFISSAPLDTTQLQASAPLPSLILSKTETREGLYGSYEVEVGPQQRENAAG--TFKSKEATEKGKNKYSAVLGVLLVGSFIIPMVQYWWYIKDDD 612
S A PRM+L PFA AA AH I S P++ L ++ P+ +++ ETREGLYG YEVEV + E G TFK KE TE+G++KY++VL VLL GSF+IPMVQYWWYI+DDD
Sbjct: 38 SAASASGPRMMLPMAPFAGAAVAHLIGSNPINPEHLVSAKSQPTHLVAYKETREGLYGPYEVEVQERAPETDFGISTFKKKEETEEGRDKYTSVLAVLLAGSFVIPMVQYWWYIRDDD 155
BLAST of mRNA_P-wetherbeei_contig636.1.1 vs. uniprot
Match: A0A7S2B691_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2B691_9STRA) HSP 1 Score: 100 bits (250), Expect = 5.810e-23 Identity = 59/112 (52.68%), Postives = 77/112 (68.75%), Query Frame = 1
Query: 289 TPRMLLDPFAAAAAAHFISSAPLDTTQLQ-----ASAPLPSLILSKTETREGLYGSYEVEVGPQQRENAAGTFKSKEATEKGKNKYSAVLGVLLVGSFIIPMVQYWWYIKDD 609
TP LD AA AA + +A + TT ++ A P + K ETREG+YG+YEVE+ PQ ++AAGTFKSK+ T KGK KY AVLGVLL GSF+IPM+QY+WY+++D
Sbjct: 37 TPVAKLDSRAAGLAAASLLAASVATTAVEPVSAHAMYDAPMTVAVK-ETREGVYGTYEVEIKPQDVDDAAGTFKSKDDTVKGKKKYIAVLGVLLFGSFVIPMLQYFWYVRED 147
BLAST of mRNA_P-wetherbeei_contig636.1.1 vs. uniprot
Match: A0A7R9U6V2_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U6V2_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 3.290e-22 Identity = 46/74 (62.16%), Postives = 56/74 (75.68%), Query Frame = 1
Query: 391 PSLILSKTETREGLYGSYEVEVGPQQRENAAGTFKSKEATEKGKNKYSAVLGVLLVGSFIIPMVQYWWYIKDDD 612
P + ++TE R+G+Y Y +E QQ +NAA FKSKE T GKN+Y AVLGVL+VGSFIIPM QYWWYIKDD+
Sbjct: 60 PGIASAETEVRQGMYKEYTIEKKSQQYDNAASGFKSKEETASGKNRYVAVLGVLVVGSFIIPMAQYWWYIKDDE 133
BLAST of mRNA_P-wetherbeei_contig636.1.1 vs. uniprot
Match: A0A6U4F5S3_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4F5S3_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 5.040e-19 Identity = 60/129 (46.51%), Postives = 76/129 (58.91%), Query Frame = 1
Query: 226 LAATFPLSSGLVPPPSIRRAMTPRMLLDPFAAAAAAHFISSAPLDTTQLQASAPLPSLILSKTETREGLYGSYEVEVGPQQRENAAGTFKSKEATEKGKNKYSAVLGVLLVGSFIIPMVQYWWYIKDDD 612
LAA F +S P R+A M L AAA I +A L Q A+ PS ++TE R+GLY Y VE G Q+ ++A +K+K+ T GKN+Y VLG LLVGSFIIPM Q+WWYIKDD+
Sbjct: 9 LAALFAGASAFTAPRGARKAAQVEMSLGKNLRTAAATAIVAAGL---QFGAA---PSF--AETEVRQGLYKEYTVETGAQKFDDATSKYKTKKETAGGKNRYIVVLGTLLVGSFIIPMAQFWWYIKDDE 129
BLAST of mRNA_P-wetherbeei_contig636.1.1 vs. uniprot
Match: A0A7S2RT02_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RT02_9STRA) HSP 1 Score: 90.9 bits (224), Expect = 5.060e-19 Identity = 58/143 (40.56%), Postives = 80/143 (55.94%), Query Frame = 1
Query: 226 LAATFPLSSGLVPPPSIRRAMTPRMLLDPFAAAAAAHF---------------ISSAPLDTTQLQASAPLPSLILSKTETREGLYGSYEVEVGPQQRENAAGTFKSKEATEKGKNKYSAVLGVLLVGSFIIPMVQYWWYIKDD 609
LAA F S P +RR +TPR L+ +A A A + S P D AP+ +S E R+G+YG YEV+V PQ + A GTFK+ T+ GK KY +VLGVLL+GSF+IPM+QY+WY++++
Sbjct: 22 LAAAF---SRTAAPRPMRRVLTPRASLEGISAGAVAXXXXXXXXLSAGAGMVTVPSTPADHIFNMRDAPMT---VSAKELRQGVYGEYEVDVTPQAYDKADGTFKTAAKTKAGKTKYVSVLGVLLIGSFVIPMLQYFWYVREE 158
BLAST of mRNA_P-wetherbeei_contig636.1.1 vs. uniprot
Match: A0A1Z5K6I3_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K6I3_FISSO) HSP 1 Score: 90.5 bits (223), Expect = 7.440e-19 Identity = 39/74 (52.70%), Postives = 57/74 (77.03%), Query Frame = 1
Query: 391 PSLILSKTETREGLYGSYEVEVGPQQRENAAGTFKSKEATEKGKNKYSAVLGVLLVGSFIIPMVQYWWYIKDDD 612
P+ +L++ REG+YG YE+++ Q+ ++A TFKS + T+ K KY+A+L +L+VGSFIIPM QYWWY+KDDD
Sbjct: 65 PTQVLAEKVIREGVYGEYEIDLPEQKYDDARSTFKSAKETKTKKGKYTALLAILIVGSFIIPMAQYWWYVKDDD 138
BLAST of mRNA_P-wetherbeei_contig636.1.1 vs. uniprot
Match: A0A8J2SRR3_9STRA (Inorganic diphosphatase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRR3_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 1.470e-17 Identity = 55/129 (42.64%), Postives = 78/129 (60.47%), Query Frame = 1
Query: 226 LAATFPLSSGLVPPPSIRRAMTPRMLLDPFAAAAAAHFISSAPLDTTQLQASAPLPSLILSKTETREGLYGSYEVEV--GPQQRENAAGTFKSKEATEKGKNKYSAVLGVLLVGSFIIPMVQYWWYIKD 606
L A +S V P + R T ++D AAA ++SAP+D +L + P +L ++T TREGLYG Y VE+ P ++A TFK++ T+KGKNKY + VLL GSF+IPM QY+WY++D
Sbjct: 4 LLALLGAASAFVGPAAAPRQPTKLNVVDAALAAA----LASAPVDVAKLNSRLPTTTLAKTRTITREGLYGDYTVEIIDEPNPLDDARSTFKTRAQTKKGKNKYLGLFVVLLFGSFVIPMAQYFWYVRD 128
BLAST of mRNA_P-wetherbeei_contig636.1.1 vs. uniprot
Match: A0A7S2JTQ0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2JTQ0_9STRA) HSP 1 Score: 86.3 bits (212), Expect = 3.110e-17 Identity = 48/98 (48.98%), Postives = 67/98 (68.37%), Query Frame = 1
Query: 313 FAAAAAAHFISSAPLDTTQLQASAPLPSLILSKTETREGLYGSYEVEVGPQQRENAAGTFKSKEATEKGKNKYSAVLGVLLVGSFIIPMVQYWWYIKD 606
FAAA A + + P D SA PS ++S+ TREG+YG+Y+V++ Q+ ++A TFK K T+ K KY+A+L VL+VGSFIIPM QY+WY+KD
Sbjct: 39 FAAATIASNLVTPPADAMDFN-SAVFPSTVVSEKVTREGMYGTYDVDL-VQEVDDARSTFKPKAETKSKKGKYTALLSVLVVGSFIIPMAQYFWYVKD 134 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig636.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig636.1.1 >prot_P-wetherbeei_contig636.1.1 ID=prot_P-wetherbeei_contig636.1.1|Name=mRNA_P-wetherbeei_contig636.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=113bp MTPRMLLDPFAAAAAAHFISSAPLDTTQLQASAPLPSLILSKTETREGLYback to top mRNA from alignment at P-wetherbeei_contig636:2..1439- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig636.1.1 ID=mRNA_P-wetherbeei_contig636.1.1|Name=mRNA_P-wetherbeei_contig636.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1438bp|location=Sequence derived from alignment at P-wetherbeei_contig636:2..1439- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig636:2..1439- >mRNA_P-wetherbeei_contig636.1.1 ID=mRNA_P-wetherbeei_contig636.1.1|Name=mRNA_P-wetherbeei_contig636.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=339bp|location=Sequence derived from alignment at P-wetherbeei_contig636:2..1439- (Phaeothamnion wetherbeei SAG_119_79)back to top |