mRNA_P-wetherbeei_contig6349.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6349.1.2
Unique NamemRNA_P-wetherbeei_contig6349.1.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig6349.1.2 vs. uniprot
Match: A0A482SGJ0_9ARCH (DNA helicase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SGJ0_9ARCH)

HSP 1 Score: 522 bits (1345), Expect = 8.200e-183
Identity = 261/308 (84.74%), Postives = 284/308 (92.21%), Query Frame = 1
Query:    4 GDKSGRITLCTTEMETVYDLGAKMIDALQKEKVTAGDVITIDKASGRISKLGRSFTRSRDYDAMGPQTRFVQTPEGELQKRKEVVHVVSLHEVDVINSRQQGFLALFAGDTGEIKAEVREQIDVKVSEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIIATNRGIARIRGTNYKSPHGIPIDLLDRLMIIQTVPYSQSEVKKILTIRCEEEDVEMAADALDLLTRIGMETSLRYAIHMIMAAQLCCAKRKGTEVAVQDIKRIYSLFVDVKRSAQFLIEYQKEFMF---HEADDSE 918
            G+K+GRITLCTTEMETVYDLG+KMI+ALQKEK++AGDVITIDKASG+I+KLGRSFTRSRDYDAMGPQTRFVQ PEGELQKRKEVVH VSLHE+DVINSRQQGFLALFAGDTGEIK EVREQID KV+EWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIIATNRG A+IRGT YKSPHGIPIDLLDRLMII T+PYS+SE+ KIL IRCEEEDVEM+ DAL+LLT+IG+ETSLRYAI MI  A LCC KRKGTEV ++DIKR Y+LFVDVKRS QFL+EYQK+FMF    E DD E
Sbjct:  124 GEKNGRITLCTTEMETVYDLGSKMIEALQKEKISAGDVITIDKASGKITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHTVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDTKVAEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIIATNRGFAKIRGTEYKSPHGIPIDLLDRLMIISTIPYSESEMAKILEIRCEEEDVEMSKDALELLTKIGVETSLRYAIQMITIASLCCIKRKGTEVDIEDIKRCYTLFVDVKRSTQFLMEYQKDFMFSAVQEGDDEE 431          
BLAST of mRNA_P-wetherbeei_contig6349.1.2 vs. uniprot
Match: D8LJG0_ECTSI (RuvB-like helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJG0_ECTSI)

HSP 1 Score: 523 bits (1346), Expect = 1.340e-182
Identity = 260/300 (86.67%), Postives = 284/300 (94.67%), Query Frame = 1
Query:    1 GGDKSGRITLCTTEMETVYDLGAKMIDALQKEKVTAGDVITIDKASGRISKLGRSFTRSRDYDAMGPQTRFVQTPEGELQKRKEVVHVVSLHEVDVINSRQQGFLALFAGDTGEIKAEVREQIDVKVSEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIIATNRGIARIRGTNYKSPHGIPIDLLDRLMIIQTVPYSQSEVKKILTIRCEEEDVEMAADALDLLTRIGMETSLRYAIHMIMAAQLCCAKRKGTEVAVQDIKRIYSLFVDVKRSAQFLIEYQKEFMFH 900
            GGDK+GR+TLCTTEMETVYDLGAKMI+ALQKEKV AGDV+TIDKASG+I+KLGRSFTRSRDYDAMGPQTRFVQ PEGELQKRKEVVHVVSLHE+DVINSRQQGFLALFAGDTGEIK EVREQID+KV+EWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALES LAPVLIIATNRGIA+IRGTNYKSPHGIPIDLLDRLMI+ TV YS+ EVKKIL+IRCEEEDVEM  DA+ LLT+I METSLRYAIHMIMAAQL   KRKGT+V ++DIK++YSLFVD+KRS QFL+EYQK+FMF+
Sbjct:  153 GGDKTGRVTLCTTEMETVYDLGAKMIEALQKEKVGAGDVMTIDKASGKITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDLKVAEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESHLAPVLIIATNRGIAKIRGTNYKSPHGIPIDLLDRLMIVSTVAYSEQEVKKILSIRCEEEDVEMDDDAIILLTKIAMETSLRYAIHMIMAAQLVSTKRKGTQVEIEDIKKVYSLFVDIKRSTQFLMEYQKDFMFN 452          
BLAST of mRNA_P-wetherbeei_contig6349.1.2 vs. uniprot
Match: A0A835YPQ1_9STRA (RuvB-like helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPQ1_9STRA)

HSP 1 Score: 524 bits (1350), Expect = 2.420e-182
Identity = 272/352 (77.27%), Postives = 291/352 (82.67%), Query Frame = 1
Query:    1 GGDKSGRITLCTTEMETVYDLGAKMIDALQKEKVTAGDVITIDKASGRISKLGRSFTRSRDYDAMGPQTRFVQTPEGELQKRKEVVHVVSLHEVDVINSRQQGFLALFAGDTGEIKAEVREQIDVKVSEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIIATNRGIARIRGTNYKSPHGIPIDLLDRLMIIQTVPYSQSEVKKILTIR------------------------------------------------CEEEDVEMAADALDLLTRIGMETSLRYAIHMIMAAQLCCAKRKGTEVAVQDIKRIYSLFVDVKRSAQFLIEYQKEFMFHEADD 912
            GGDK+GR+TLCTTEMETVYDLGAKMIDALQKEKVTAGDVITIDKASGRI+KLGRSFTRSRDYDAMGPQTRFVQ PEGELQKRKEVVHVVSLHE+DVINSRQQGFLALFAGDTGEIK+EVREQID KV+EWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALE+DLAPVLIIATNRGI +IRGTNY+SPHGIPIDLLDRLMII TV YS+ E++KILTIR                                                CEEEDVEMA DALDLLTRIG+ETSLRYAIHMIMAA L C KRKGTEV+V+DIKR+Y LFVDVKRS QFL+EYQKEFMF+E D+
Sbjct:  153 GGDKTGRVTLCTTEMETVYDLGAKMIDALQKEKVTAGDVITIDKASGRITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFAGDTGEIKSEVREQIDAKVAEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALETDLAPVLIIATNRGIVKIRGTNYRSPHGIPIDLLDRLMIISTVAYSEGEIRKILTIRNCWQQQNVTGSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRCEEEDVEMAEDALDLLTRIGIETSLRYAIHMIMAASLVCQKRKGTEVSVEDIKRVYGLFVDVKRSTQFLMEYQKEFMFNEVDE 504          
BLAST of mRNA_P-wetherbeei_contig6349.1.2 vs. uniprot
Match: A0A662WIM4_9STRA (RuvB-like helicase (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WIM4_9STRA)

HSP 1 Score: 516 bits (1329), Expect = 2.960e-182
Identity = 261/305 (85.57%), Postives = 279/305 (91.48%), Query Frame = 1
Query:    4 GDKSGRITLCTTEMETVYDLGAKMIDALQKEKVTAGDVITIDKASGRISKLGRSFTRSRDYDAMGPQTRFVQTPEGELQKRKEVVHVVSLHEVDVINSRQQGFLALFAGDTGEIKAEVREQIDVKVSEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIIATNRGIARIRGTNYKSPHGIPIDLLDRLMIIQTVPYSQSEVKKILTIRCEEEDVEMAADALDLLTRIGMETSLRYAIHMIMAAQLCCAKRKGTEVAVQDIKRIYSLFVDVKRSAQFLIEYQKEFMFHEADDSE 918
            GDK GR+TL TTEMETVYDLGAKMID+L KEKV AGDVITI+K SG+I+KLGRSFTRSRDYDAMG QTRFVQ PEGELQKRKEVVHVVSLHE+DVINSR QGFLALFAGDTGEIK EVREQID KV+EWREEGKA+IVPGVLFIDEVHMLDIECFSWLNRALESD+APVLIIATNRGI RIRGTNYKSPHGIPIDLLDRLMII T  YS+SE++KILTIRCEEEDVEM  +A DLLTRI +ETSLRYAIHMI+AA L CAKRKGTEV V DIKR+YSLF DVKRS QFL+EYQ+EFMFHE DD E
Sbjct:   22 GDKVGRLTLRTTEMETVYDLGAKMIDSLTKEKVEAGDVITINKESGKIAKLGRSFTRSRDYDAMGAQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRSQGFLALFAGDTGEIKDEVREQIDTKVAEWREEGKASIVPGVLFIDEVHMLDIECFSWLNRALESDMAPVLIIATNRGITRIRGTNYKSPHGIPIDLLDRLMIIPTKSYSESEMRKILTIRCEEEDVEMTEEAKDLLTRIAVETSLRYAIHMIIAASLVCAKRKGTEVDVPDIKRVYSLFADVKRSTQFLMEYQREFMFHEVDDEE 326          
BLAST of mRNA_P-wetherbeei_contig6349.1.2 vs. uniprot
Match: A0A6V1PUX3_HETAK (RuvB-like helicase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PUX3_HETAK)

HSP 1 Score: 521 bits (1342), Expect = 6.000e-182
Identity = 258/304 (84.87%), Postives = 283/304 (93.09%), Query Frame = 1
Query:    7 DKSGRITLCTTEMETVYDLGAKMIDALQKEKVTAGDVITIDKASGRISKLGRSFTRSRDYDAMGPQTRFVQTPEGELQKRKEVVHVVSLHEVDVINSRQQGFLALFAGDTGEIKAEVREQIDVKVSEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIIATNRGIARIRGTNYKSPHGIPIDLLDRLMIIQTVPYSQSEVKKILTIRCEEEDVEMAADALDLLTRIGMETSLRYAIHMIMAAQLCCAKRKGTEVAVQDIKRIYSLFVDVKRSAQFLIEYQKEFMFHEADDSE 918
            +K+GR+TLCTTEMETVYDLG KMIDALQKEK +AGDVITIDKASGRI++LGRSFTRSRDYDAMGPQTRFVQ PEGELQKRKEVVHVVSLHE+DVINSRQQGFLALFAGDTGEIK+EVREQID +V+EWREEGKAT+VPGVLFIDEVHMLDIECFSWLNRALES LAPVLIIATNRG A+IRGT+YKSPHGIPIDLLDRLMI+ T PY + E+++IL IR EEEDVEM++DALDLLTRIGMETSLRYAI MIM A LCC KRKGTEV ++DIKR+YSLFVDVKRS QFL+EYQKEFMF+EA   E
Sbjct:  154 EKTGRLTLCTTEMETVYDLGQKMIDALQKEKCSAGDVITIDKASGRITRLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFAGDTGEIKSEVREQIDARVAEWREEGKATVVPGVLFIDEVHMLDIECFSWLNRALESTLAPVLIIATNRGFAKIRGTSYKSPHGIPIDLLDRLMIVSTEPYKEKEIRRILEIRIEEEDVEMSSDALDLLTRIGMETSLRYAIQMIMIASLCCEKRKGTEVDIEDIKRVYSLFVDVKRSTQFLMEYQKEFMFNEAGGDE 457          
BLAST of mRNA_P-wetherbeei_contig6349.1.2 vs. uniprot
Match: W7TAI8_9STRA (RuvB-like helicase n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7TAI8_9STRA)

HSP 1 Score: 520 bits (1340), Expect = 1.340e-181
Identity = 263/308 (85.39%), Postives = 286/308 (92.86%), Query Frame = 1
Query:    1 GGDKSGRITLCTTEMETVYDLGAKMIDALQKEKVTAGDVITIDKASGRISKLGRSFTRSRDYDAMGPQTRFVQTPEGELQKRKEVVHVVSLHEVDVINSRQQGFLALFAGDTGEIKAEVREQIDVKVSEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIIATNRGIARIRGTNYKSPHGIPIDLLDRLMIIQTVPYSQSEVKKILTIRCEEEDVEMAADALDLLTRIGMETSLRYAIHMIMAAQLCCAKRKGTEVAVQDIKRIYSLFVDVKRSAQFLIEYQKEFMFHE--ADDSE 918
            GG K+GRITLCTTEMETVYDLGAKMI+ALQKEKV+AGDVITIDKASG+ISKLGRSFTRSRDYDAMGPQTRFVQ PEGELQKRKE VHVVSLHE+DVINSRQQGFLALFAGDTGEIK EVREQID+KV+EWREEGKAT+VPGVLFIDEVHMLDIECFSWLNRALESDLAPVLI+ATNRG+A+IRGT YKSPHGIPIDLLDRLMII T PY+++EV++IL IRCEEEDVEM+ DAL+LLT+IGME SLRYAIHMIMAA L   KRK  EV VQDIKR+YSLFVDVKRS QFL+EYQ+EFMF+E   DD E
Sbjct:  151 GGAKTGRITLCTTEMETVYDLGAKMIEALQKEKVSAGDVITIDKASGKISKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKETVHVVSLHEIDVINSRQQGFLALFAGDTGEIKGEVREQIDMKVAEWREEGKATVVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIMATNRGMAQIRGTAYKSPHGIPIDLLDRLMIISTTPYAEAEVRRILQIRCEEEDVEMSDDALELLTKIGMEASLRYAIHMIMAASLVAHKRKAGEVDVQDIKRVYSLFVDVKRSTQFLVEYQQEFMFNELGGDDME 458          
BLAST of mRNA_P-wetherbeei_contig6349.1.2 vs. uniprot
Match: A0A7R9YE57_9STRA (RuvB-like helicase n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YE57_9STRA)

HSP 1 Score: 518 bits (1335), Expect = 9.480e-181
Identity = 256/304 (84.21%), Postives = 283/304 (93.09%), Query Frame = 1
Query:    7 DKSGRITLCTTEMETVYDLGAKMIDALQKEKVTAGDVITIDKASGRISKLGRSFTRSRDYDAMGPQTRFVQTPEGELQKRKEVVHVVSLHEVDVINSRQQGFLALFAGDTGEIKAEVREQIDVKVSEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIIATNRGIARIRGTNYKSPHGIPIDLLDRLMIIQTVPYSQSEVKKILTIRCEEEDVEMAADALDLLTRIGMETSLRYAIHMIMAAQLCCAKRKGTEVAVQDIKRIYSLFVDVKRSAQFLIEYQKEFMFHEADDSE 918
            +K GRITLCTT+METVYDLG+KMID+LQKEKV AGDVITIDKASG+I+KLGRSFTRSRDYDAMGPQTRFVQ PEGELQKRKEVVHVVSLHE+DVINSRQQGFLALF+GDTGEIKAEVREQI+ KV+EWREEGKA+IVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIIATNRG A IRGT YKSPHGIPIDLLDRLMII T PY + E+++IL IRCEEEDV+MA++ALDLLTRIGMETS+RYAIHMIMAA LC +KRK  EV V+DI+R+YSLFVDVKRS QFL+EYQ++FMF+E  D E
Sbjct:  157 EKRGRITLCTTDMETVYDLGSKMIDSLQKEKVLAGDVITIDKASGKITKLGRSFTRSRDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRQQGFLALFSGDTGEIKAEVREQINAKVAEWREEGKASIVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIIATNRGFANIRGTKYKSPHGIPIDLLDRLMIIPTAPYKEKEIRRILEIRCEEEDVDMASEALDLLTRIGMETSMRYAIHMIMAASLCASKRKANEVDVEDIRRVYSLFVDVKRSTQFLMEYQQDFMFNEISDDE 460          
BLAST of mRNA_P-wetherbeei_contig6349.1.2 vs. uniprot
Match: A0A024U2S4_9STRA (RuvB-like helicase n=2 Tax=Aphanomyces TaxID=100860 RepID=A0A024U2S4_9STRA)

HSP 1 Score: 516 bits (1329), Expect = 4.930e-180
Identity = 261/305 (85.57%), Postives = 277/305 (90.82%), Query Frame = 1
Query:    4 GDKSGRITLCTTEMETVYDLGAKMIDALQKEKVTAGDVITIDKASGRISKLGRSFTRSRDYDAMGPQTRFVQTPEGELQKRKEVVHVVSLHEVDVINSRQQGFLALFAGDTGEIKAEVREQIDVKVSEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIIATNRGIARIRGTNYKSPHGIPIDLLDRLMIIQTVPYSQSEVKKILTIRCEEEDVEMAADALDLLTRIGMETSLRYAIHMIMAAQLCCAKRKGTEVAVQDIKRIYSLFVDVKRSAQFLIEYQKEFMFHEADDSE 918
            GDK GR+TL TTEMETVYDLGAKMID L KEK+ AGDVITI+K SG+ISKLGRSFTRS+DYDAMGPQTRFVQ PEGELQKRKEVVHVVSLHE+DVINSR QGFLALFAGDTGEIK EVREQID KVSEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIIATNRGI RIRGTNYKSPHGIPIDLLDRLMII T PYS+S+V+KIL IRCEEEDVEM  DA DLLTRI METSLRYAIH+IM A L C KRKGTEV V DIK++YSLFVDVKRS QFL+EYQ EFMF+E D+ +
Sbjct:  170 GDKIGRLTLRTTEMETVYDLGAKMIDQLTKEKIEAGDVITINKESGKISKLGRSFTRSKDYDAMGPQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRSQGFLALFAGDTGEIKDEVREQIDTKVSEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIIATNRGITRIRGTNYKSPHGIPIDLLDRLMIISTKPYSESDVRKILNIRCEEEDVEMTDDAKDLLTRIAMETSLRYAIHVIMTASLVCTKRKGTEVDVADIKKVYSLFVDVKRSTQFLMEYQHEFMFNEIDEDD 474          
BLAST of mRNA_P-wetherbeei_contig6349.1.2 vs. uniprot
Match: H3G952_PHYRM (RuvB-like helicase n=39 Tax=Oomycota TaxID=4762 RepID=H3G952_PHYRM)

HSP 1 Score: 514 bits (1323), Expect = 1.570e-179
Identity = 259/305 (84.92%), Postives = 277/305 (90.82%), Query Frame = 1
Query:    4 GDKSGRITLCTTEMETVYDLGAKMIDALQKEKVTAGDVITIDKASGRISKLGRSFTRSRDYDAMGPQTRFVQTPEGELQKRKEVVHVVSLHEVDVINSRQQGFLALFAGDTGEIKAEVREQIDVKVSEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIIATNRGIARIRGTNYKSPHGIPIDLLDRLMIIQTVPYSQSEVKKILTIRCEEEDVEMAADALDLLTRIGMETSLRYAIHMIMAAQLCCAKRKGTEVAVQDIKRIYSLFVDVKRSAQFLIEYQKEFMFHEADDSE 918
            GDK GR+TL TTEMETVYDLGAKMID+L KEKV AGDVITI+K SG+I+KLGRSFTRSRDYDAMG QTRFVQ PEGELQKRKEVVHVVSLHE+DVINSR QGFLALF+GDTGEIK EVREQID KV+EWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESD+APVLIIATNRGI RIRGTNYKSPHGIPIDLLDRLMII T PYS+SE++KIL IRCEEEDVEM  +A DLLTRI +ETSLRYAIHMI+ A L C KRKGTEV V DIKR+YSLF DVKRS QFL+EYQ+EFMFHE DD E
Sbjct:  141 GDKVGRLTLRTTEMETVYDLGAKMIDSLTKEKVEAGDVITINKESGKIAKLGRSFTRSRDYDAMGAQTRFVQCPEGELQKRKEVVHVVSLHEIDVINSRSQGFLALFSGDTGEIKDEVREQIDTKVAEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDMAPVLIIATNRGITRIRGTNYKSPHGIPIDLLDRLMIIPTKPYSESEMRKILIIRCEEEDVEMTEEAKDLLTRIAVETSLRYAIHMIITASLVCLKRKGTEVDVPDIKRVYSLFADVKRSTQFLMEYQREFMFHEVDDEE 445          
BLAST of mRNA_P-wetherbeei_contig6349.1.2 vs. uniprot
Match: A0A812WEQ8_SYMMI (RuvB-like helicase n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WEQ8_SYMMI)

HSP 1 Score: 513 bits (1322), Expect = 2.390e-179
Identity = 253/305 (82.95%), Postives = 283/305 (92.79%), Query Frame = 1
Query:    4 GDKSGRITLCTTEMETVYDLGAKMIDALQKEKVTAGDVITIDKASGRISKLGRSFTRSRDYDAMGPQTRFVQTPEGELQKRKEVVHVVSLHEVDVINSRQQGFLALFAGDTGEIKAEVREQIDVKVSEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALESDLAPVLIIATNRGIARIRGTNYKSPHGIPIDLLDRLMIIQTVPYSQSEVKKILTIRCEEEDVEMAADALDLLTRIGMETSLRYAIHMIMAAQLCCAKRKGTEVAVQDIKRIYSLFVDVKRSAQFLIEYQKEFMFHEADDSE 918
            G+K+GR+TLCTTEMETVYDLGAKMIDALQKEKV+AGDVITIDKASGRISKLGRSFTRSRDYDAMG QTRFVQ PEGELQKRKEVVH VSLHE+DVINSRQQGFLALFAGDTGEIKAEVREQID+KV+EWREEGKAT VPGVLFIDEVHMLDIECFSWLNRALESD+APVLIIATNRG A+IRGTNYKSPHGIPIDLLDRLMI+ T PY++SEV++IL IR EEEDVEM+ DA+DLLT+I METSLRYAI MIM + LCC +RKG+ V ++DIKR+Y LFVDVKRS QFL+EYQ++FMF++ +  +
Sbjct:  139 GEKTGRLTLCTTEMETVYDLGAKMIDALQKEKVSAGDVITIDKASGRISKLGRSFTRSRDYDAMGAQTRFVQCPEGELQKRKEVVHTVSLHEIDVINSRQQGFLALFAGDTGEIKAEVREQIDMKVAEWREEGKATTVPGVLFIDEVHMLDIECFSWLNRALESDMAPVLIIATNRGFAKIRGTNYKSPHGIPIDLLDRLMIVSTKPYTESEVQRILEIRGEEEDVEMSKDAMDLLTKIAMETSLRYAIQMIMVSSLCCQQRKGSSVNIEDIKRVYGLFVDVKRSTQFLMEYQRDFMFNDINSDD 443          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6349.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A482SGJ0_9ARCH8.200e-18384.74DNA helicase n=1 Tax=archaeon TaxID=1906665 RepID=... [more]
D8LJG0_ECTSI1.340e-18286.67RuvB-like helicase n=2 Tax=Ectocarpus TaxID=2879 R... [more]
A0A835YPQ1_9STRA2.420e-18277.27RuvB-like helicase n=1 Tax=Tribonema minus TaxID=3... [more]
A0A662WIM4_9STRA2.960e-18285.57RuvB-like helicase (Fragment) n=1 Tax=Nothophytoph... [more]
A0A6V1PUX3_HETAK6.000e-18284.87RuvB-like helicase n=1 Tax=Heterosigma akashiwo Ta... [more]
W7TAI8_9STRA1.340e-18185.39RuvB-like helicase n=3 Tax=Monodopsidaceae TaxID=4... [more]
A0A7R9YE57_9STRA9.480e-18184.21RuvB-like helicase n=2 Tax=Pinguiococcus pyrenoido... [more]
A0A024U2S4_9STRA4.930e-18085.57RuvB-like helicase n=2 Tax=Aphanomyces TaxID=10086... [more]
H3G952_PHYRM1.570e-17984.92RuvB-like helicase n=39 Tax=Oomycota TaxID=4762 Re... [more]
A0A812WEQ8_SYMMI2.390e-17982.95RuvB-like helicase n=1 Tax=Symbiodinium microadria... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6349contigP-wetherbeei_contig6349:1015..3473 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog4792.ETI47185
PFAMsTIP49
Model size1044
Max annot lvl4776|Peronosporales
KEGG koko:K11338
Hectar predicted targeting categoryother localisation
Exons5
Evalue5.76e-175
EggNOG OGsCOG1224@1|root,KOG2680@2759|Eukaryota,3Q923@4776|Peronosporales
EC3.6.4.12
DescriptionTIP49 C-terminus
Cds size996
COG categoryL
BRITEko00000,ko01000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6349.1.2prot_P-wetherbeei_contig6349.1.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6349 1021..3431 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186906.551812-UTR-P-wetherbeei_contig6349:1014..10201683186906.551812-UTR-P-wetherbeei_contig6349:1014..1020Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6349 1015..1020 -
1683186906.6117163-UTR-P-wetherbeei_contig6349:3431..34731683186906.6117163-UTR-P-wetherbeei_contig6349:3431..3473Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig6349 3432..3473 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186906.563006-CDS-P-wetherbeei_contig6349:1020..12571683186906.563006-CDS-P-wetherbeei_contig6349:1020..1257Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6349 1021..1257 -
1683186906.572301-CDS-P-wetherbeei_contig6349:1610..17931683186906.572301-CDS-P-wetherbeei_contig6349:1610..1793Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6349 1611..1793 -
1683186906.5821283-CDS-P-wetherbeei_contig6349:2143..23831683186906.5821283-CDS-P-wetherbeei_contig6349:2143..2383Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6349 2144..2383 -
1683186906.5919778-CDS-P-wetherbeei_contig6349:2716..29951683186906.5919778-CDS-P-wetherbeei_contig6349:2716..2995Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6349 2717..2995 -
1683186906.6030774-CDS-P-wetherbeei_contig6349:3374..34311683186906.6030774-CDS-P-wetherbeei_contig6349:3374..3431Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6349 3375..3431 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6349.1.2

>prot_P-wetherbeei_contig6349.1.2 ID=prot_P-wetherbeei_contig6349.1.2|Name=mRNA_P-wetherbeei_contig6349.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=332bp
METVYDLGAKMIDALQKEKVTAGDVITIDKASGRISKLGRSFTRSRDYDA
MGPQTRFVQTPEGELQKRKEVVHVVSLHEVDVINSRQQGFLALFAGDTGE
IKAEVREQIDVKVSEWREEGKATIVPGVLFIDEVHMLDIECFSWLNRALE
SDLAPVLIIATNRGIARIRGTNYKSPHGIPIDLLDRLMIIQTVPYSQSEV
KKILTIRCEEEDVEMAADALDLLTRIGMETSLRYAIHMIMAAQLCCAKRK
GTEVAVQDIKRIYSLFVDVKRSAQFLIEYQKEFMFHEADDSEDGGGQQSD
DDDDDDDHDDEEDDEEDEAAEGAGSPMEEQS*
back to top

mRNA from alignment at P-wetherbeei_contig6349:1015..3473-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6349.1.2 ID=mRNA_P-wetherbeei_contig6349.1.2|Name=mRNA_P-wetherbeei_contig6349.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2459bp|location=Sequence derived from alignment at P-wetherbeei_contig6349:1015..3473- (Phaeothamnion wetherbeei SAG_119_79)
GGCGGTGACAAGTCGGGGCGCATCACGCTGTGCACCACCGAGATGGAGAC CGTCTACGACCTCGGGGCCAAGATGATCGATGCGCTGCAGAAGGAGAAGG TGGAGAGGGCGAAATGGGGGAGGGGTTCGGGCGGGAGGTTTGCTGGCGAT TGGATAGGGGCGCGCTGCGTCCTCTTTTTAACGGTCGTTCTGTTACTCCT GTGACGTTTAAACGCTAAATAGCTTCCCTTCTTTGTTTTCAGCAGTTTTC CGGGTGGAAAGAGAGATTCGATGAGAGAGAATAGAGAAGTAGCATGGCCT GCTTGCTGGTTTATGGCTGCAGCTTGCCGTTTTCTTCTTTTGTTTTTGCT TTCTTCGCCTTGTCCCCCTTCCACAACGCGCCTCCCCGCCGGCACAAACC CCAATCCCCGAACCTGAAAAACTGAAATCCCCAACCCTCCTTCAAACCGC CCCGCCCCCTACCCACCCACTTTCTTAGGTGACGGCGGGCGACGTCATCA CCATTGACAAGGCTTCCGGCCGCATCTCCAAGCTCGGCCGCTCCTTTACC CGCTCGCGCGACTACGACGCCATGGGGCCGCAGACTCGCTTCGTGCAGAC GCCCGAGGGCGAGCTGCAGAAGCGGAAAGAGGTGGTGCACGTCGTGTCGC TGCACGAGGTGGATGTGATCAACTCGCGGCAGCAAGGGTTTCTGGCGCTG TTCGCGGGGGACACGGGGGAGATCAAGGCGGAGGTCCGCGAGCAGATCGA CGTCAAGGTCAGTGAGAAATGGGGGATTTTGGTTTGGTGCAGGGAGTGAT GCTTTTGTGGTTTTTTCTGGTGTCGTTTTGGGGAGGTTTCCGGGCCGGCG GTTACAGGGTCGGTTCGCTGCTTTCGTCGCGTTACGTGGCGGTTGCAACG ATTCATGCAGTCTTTTTTGCCTTGGTGCATGCGCGTGAAACCTCCGCATT GGCCAGTCGATCTAGTCAACTGCGGATTATCACGATGGACGACGCGAGAG CGGGGCGTCCTATAACATCTAACTGTCATTACAACGCCGCTACATACCGC CCACGCTACCGTGTATAATTACCATCTGTTTCTCCCACAGGTGTCGGAGT GGCGGGAGGAGGGCAAGGCGACCATCGTGCCCGGCGTGCTTTTCATCGAC GAAGTCCATATGCTCGACATCGAATGCTTCTCCTGGCTCAACCGCGCCCT CGAGTCCGACCTGGCGCCCGTGCTGATCATCGCAACAAACCGCGGCATCG CACGCATCCGCGGCACCAACTACAAGTCGCCGCACGGCATTCCCATCGAC CTGCTGGACCGCCTCATGATCATCCAGACGGTGAGGAGTTAGAGGAGAGG GTTTGGTAGGGAGGGAGAGAGGATTGCAGAGAGGGAAGGGTATTTTTGGA GGGAGAGAATTTGTGTGTTTTGAGGAAGAGGGCGTTCTTCCTCTCGGACT TCTTTGTTTGAGCTCTTTCCTTTTCGTTTTCTTCTTTCTTCTTTTCTTTT GGAGGGGGGAAATGGATTTCGGAGGGAACGGGTGGGTGCCAAGGCAAAAC ATCCCCCAAGAACCACATGCCTCACTTTCTCTGCATGGCTGCCCCGTCAG AAACTTTAAAGAAGTCGTCCTTGCTTTGGCTCCACACTCACGTTCCCTAC CGCCCTGACCACCGTCCCGAATCGCCGCAGGTGCCATACTCGCAGTCGGA GGTGAAGAAGATCCTGACAATCCGGTGCGAGGAGGAGGACGTGGAGATGG CCGCCGACGCGCTCGACTTGCTGACGCGCATCGGCATGGAGACGTCGCTG CGGTACGCCATTCACATGATCATGGCGGCCCAGCTCTGCTGCGCCAAGCG CAAGGGCACAGAGGTGCGTCAGTGCGTCGTACCGGTCTCTTGATGTTTTC CTTCTTTCGGGTTCTTTTCCCTGTCTGCTTGTCCGATGTTATGACATGGT GTCTTCGCCTTTCGGTTCGGTTCTGTAAGGCCCTTTCTGCTGTTAGGTCG GCGGTCGGTCGGTTTACAGGTTTTGCTCAGAGGAGCTTTTGTCTTTGTGG CTTTGCAGCGTTAACTTTAGCTCCCTTTCGGGCCGCGTTGTCAACAATGG CTTCCGTCCCTCTCTTCTTCTGCTCACCAACTTTCACTGCCGATGCACTT TTCAACCCCTCTTTGAAACCACTTGGCACCGCCCGAACCGCAAAACCTTT AAACCGGAACAAGCAGGTGGCGGTGCAGGATATCAAGCGGATTTACTCGC TCTTCGTGGACGTCAAACGCTCTGCGCAGTTCCTCATTGAGTATCAGAAG GAGTTCATGTTCCACGAGGCCGACGACTCGGAAGACGGCGGTGGCCAACA AAGCGATGACGACGACGACGACGACGACCACGACGACGAGGAGGACGACG AGGAAGATGAGGCGGCGGAAGGAGCCGGAAGTCCGATGGAGGAGCAGAGT TGATTGTGC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig6349:1015..3473-

>mRNA_P-wetherbeei_contig6349.1.2 ID=mRNA_P-wetherbeei_contig6349.1.2|Name=mRNA_P-wetherbeei_contig6349.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=996bp|location=Sequence derived from alignment at P-wetherbeei_contig6349:1015..3473- (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGACCGTCTACGACCTCGGGGCCAAGATGATCGATGCGCTGCAGAA
GGAGAAGGTGACGGCGGGCGACGTCATCACCATTGACAAGGCTTCCGGCC
GCATCTCCAAGCTCGGCCGCTCCTTTACCCGCTCGCGCGACTACGACGCC
ATGGGGCCGCAGACTCGCTTCGTGCAGACGCCCGAGGGCGAGCTGCAGAA
GCGGAAAGAGGTGGTGCACGTCGTGTCGCTGCACGAGGTGGATGTGATCA
ACTCGCGGCAGCAAGGGTTTCTGGCGCTGTTCGCGGGGGACACGGGGGAG
ATCAAGGCGGAGGTCCGCGAGCAGATCGACGTCAAGGTGTCGGAGTGGCG
GGAGGAGGGCAAGGCGACCATCGTGCCCGGCGTGCTTTTCATCGACGAAG
TCCATATGCTCGACATCGAATGCTTCTCCTGGCTCAACCGCGCCCTCGAG
TCCGACCTGGCGCCCGTGCTGATCATCGCAACAAACCGCGGCATCGCACG
CATCCGCGGCACCAACTACAAGTCGCCGCACGGCATTCCCATCGACCTGC
TGGACCGCCTCATGATCATCCAGACGGTGCCATACTCGCAGTCGGAGGTG
AAGAAGATCCTGACAATCCGGTGCGAGGAGGAGGACGTGGAGATGGCCGC
CGACGCGCTCGACTTGCTGACGCGCATCGGCATGGAGACGTCGCTGCGGT
ACGCCATTCACATGATCATGGCGGCCCAGCTCTGCTGCGCCAAGCGCAAG
GGCACAGAGGTGGCGGTGCAGGATATCAAGCGGATTTACTCGCTCTTCGT
GGACGTCAAACGCTCTGCGCAGTTCCTCATTGAGTATCAGAAGGAGTTCA
TGTTCCACGAGGCCGACGACTCGGAAGACGGCGGTGGCCAACAAAGCGAT
GACGACGACGACGACGACGACCACGACGACGAGGAGGACGACGAGGAAGA
TGAGGCGGCGGAAGGAGCCGGAAGTCCGATGGAGGAGCAGAGTTGA
back to top