prot_P-wetherbeei_contig6347.4.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6347.4.1
Unique Nameprot_P-wetherbeei_contig6347.4.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length130
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6347.4.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000571Zinc finger, CCCH-typeSMARTSM00356c3hfinal6coord: 5..32
e-value: 2.9E-6
score: 36.8
coord: 48..72
e-value: 0.65
score: 17.8
IPR000571Zinc finger, CCCH-typePFAMPF00642zf-CCCHcoord: 7..31
e-value: 4.9E-6
score: 26.3
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 51..73
score: 12.154755
IPR000571Zinc finger, CCCH-typePROSITEPS50103ZF_C3H1coord: 5..33
score: 15.112321
NoneNo IPR availablePFAMPF14608zf-CCCH_2coord: 51..70
e-value: 0.053
score: 14.1
NoneNo IPR availableGENE3D4.10.1000.10coord: 3..37
e-value: 1.7E-8
score: 35.7
NoneNo IPR availableGENE3D1.20.120.1350coord: 45..87
e-value: 2.9E-6
score: 28.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 84..130
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 5..36
IPR036855Zinc finger, CCCH-type superfamilySUPERFAMILY90229CCCH zinc fingercoord: 50..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6347contigP-wetherbeei_contig6347:2896..3285 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6347.4.1mRNA_P-wetherbeei_contig6347.4.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6347 2719..3285 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6347.4.1 ID=prot_P-wetherbeei_contig6347.4.1|Name=mRNA_P-wetherbeei_contig6347.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=130bp
MVPRSAKIPLCRYYEQNGMCNDGEKCRFRHGSRDARDIKTPTLAAGSIDL
PCRYLAAGRCDKGQRCPFRHSTYSVEENLRRKHFANKPAVPPSRPGGATV
APGVTPSRTVIAAAGQGGSESIRGGSSSSD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000571Znf_CCCH
IPR036855Znf_CCCH_sf