prot_P-wetherbeei_contig6341.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6341.1.1
Unique Nameprot_P-wetherbeei_contig6341.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length514
Homology
BLAST of mRNA_P-wetherbeei_contig6341.1.1 vs. uniprot
Match: A0A835YLY5_9STRA (P-loop containing nucleoside triphosphate hydrolase protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLY5_9STRA)

HSP 1 Score: 201 bits (510), Expect = 4.460e-57
Identity = 96/125 (76.80%), Postives = 106/125 (84.80%), Query Frame = 0
Query:  336 RKIKILMLGDTGVGKSSLINRFTEDTFNPSLVGTVGVDFKMKPVQIDGEDVLLQVWDTAGQERFHKITRAYYRGSHGIVIVYDLSNPATLENIEYWMRNIQDNAGQTVKTCLVGNKMDLRDELEA 460
            RK+KILMLGDTGVGKSSL+NRFTED F P LVGTVGVDFKM+ + + GE VL+QVWDTAGQERFHKITRAYYRGSHGI++ YD+  PATLENI YW+ NIQDNA   V TCLVGNKMDLR E  A
Sbjct:    1 RKVKILMLGDTGVGKSSLMNRFTEDEFFPGLVGTVGVDFKMRTLDLRGERVLVQVWDTAGQERFHKITRAYYRGSHGILLAYDVGEPATLENISYWINNIQDNASSGVCTCLVGNKMDLRGETAA 125          
BLAST of mRNA_P-wetherbeei_contig6341.1.1 vs. uniprot
Match: H6WB87_VAULI (Rab8 family GTPase n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB87_VAULI)

HSP 1 Score: 186 bits (473), Expect = 1.870e-49
Identity = 86/132 (65.15%), Postives = 105/132 (79.55%), Query Frame = 0
Query:  324 YGHVRRTSPSNARKIKILMLGDTGVGKSSLINRFTEDTFNPSLVGTVGVDFKMKPVQIDGEDVLLQVWDTAGQERFHKITRAYYRGSHGIVIVYDLSNPATLENIEYWMRNIQDNAGQTVKTCLVGNKMDLR 455
            Y   R     N RKIKILMLGDTGVGKSSLI RFT+DTF+  +VGTVGVDFK++ +++ GE + +QVWDTAGQERFHKITRAYY G  GI++ YD+  P TLENI YW++NI+DNA + V+TCLVGNK DL+
Sbjct:  242 YNRHRPHRSENLRKIKILMLGDTGVGKSSLIQRFTDDTFHAGMVGTVGVDFKIRTMEVLGEKITVQVWDTAGQERFHKITRAYYHGCQGILLAYDVGEPGTLENISYWIKNIRDNASKDVRTCLVGNKADLK 373          
BLAST of mRNA_P-wetherbeei_contig6341.1.1 vs. uniprot
Match: D8LMQ2_ECTSI (Rab8E, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMQ2_ECTSI)

HSP 1 Score: 177 bits (450), Expect = 5.320e-45
Identity = 91/150 (60.67%), Postives = 116/150 (77.33%), Query Frame = 0
Query:  311 GGGVGGVGGSYVGYGHVR-RTSPSNARKIKILMLGDTGVGKSSLINRFTEDTFNPSLVGTVGVDFKMKPVQIDGEDVLLQVWDTAGQERFHKITRAYYRGSHGIVIVYDLSNPATLENIEYWMRNIQDNAGQT-VKTCLVGNKMDLRDEL 458
            G G   VGG    YG  R       ARKIK+LMLGD+GVGKSSL++RF ED F+ + V T+GVDFK+K + ++ E+V LQVWDTAGQ++FHKIT+AYYRGSHGIV+VYD+S+P TL+N  YWMR+I+D AG   V+ CLVGNK+DLR+E+
Sbjct:   26 GDGFLSVGGGSQPYGARRGHGGAPPARKIKLLMLGDSGVGKSSLMDRFMEDYFSITKVQTLGVDFKLKTIVLNDEEVDLQVWDTAGQQKFHKITQAYYRGSHGIVLVYDMSDPKTLDNTAYWMRSIRDTAGSNRVQICLVGNKVDLREEV 175          
BLAST of mRNA_P-wetherbeei_contig6341.1.1 vs. uniprot
Match: A0A6H5KJK4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJK4_9PHAE)

HSP 1 Score: 177 bits (450), Expect = 4.650e-44
Identity = 89/149 (59.73%), Postives = 116/149 (77.85%), Query Frame = 0
Query:  317 VGGSYVGYGHVR-RTSPSNARKIKILMLGDTGVGKSSLINRFTEDTFNPSLVGTVGVDFKMKPVQIDGEDVLLQVWDTAGQERFHKITRAYYRGSHGIVIVYDLSNPATLENIEYWMRNIQDNAGQT-VKTCLVGNKMDLRDELEAAEE 463
            VGG    YG  R       ARKIK+LMLGD+GVGKSSL++RF ED F+ + V T+GVDFK+K + ++ E+V LQVWDTAGQ++FHKIT+AYYRGSHGIV+VYD+S+P TL+N  YWMR+I+D AG   V+ CL+GNK+DLR+E+   E+
Sbjct:  922 VGGGSQPYGAWRGHGGAPPARKIKLLMLGDSGVGKSSLMDRFMEDYFSITKVQTLGVDFKLKTIFLNDEEVDLQVWDTAGQQKFHKITQAYYRGSHGIVLVYDISDPKTLDNTAYWMRSIRDTAGSNRVQICLIGNKVDLREEVGREEQ 1070          
BLAST of mRNA_P-wetherbeei_contig6341.1.1 vs. uniprot
Match: E4X453_OIKDI (Uncharacterized protein n=2 Tax=Oikopleura dioica TaxID=34765 RepID=E4X453_OIKDI)

HSP 1 Score: 154 bits (388), Expect = 3.510e-40
Identity = 63/125 (50.40%), Postives = 99/125 (79.20%), Query Frame = 0
Query:  339 KILMLGDTGVGKSSLINRFTEDTFNPSLVGTVGVDFKMKPVQIDGEDVLLQVWDTAGQERFHKITRAYYRGSHGIVIVYDLSNPATLENIEYWMRNIQDNAGQTVKTCLVGNKMDLRDELEAAEE 463
            K+L++GD+GVGK+ ++ RF++DTFN + + T+G+DFK+K V++ G+ + LQ+WDTAGQERFH IT +YYRG++GI++VYD++ P T +NI  W+RNI ++A + V+  L+GNK D+ D+   +EE
Sbjct:   18 KLLLIGDSGVGKTCVLFRFSDDTFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQERFHTITTSYYRGANGILLVYDITQPKTFDNISKWLRNINEHASEDVERMLIGNKCDMEDKRLISEE 142          
BLAST of mRNA_P-wetherbeei_contig6341.1.1 vs. uniprot
Match: A0A482RSH1_9ARCH (GTP-binding protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RSH1_9ARCH)

HSP 1 Score: 155 bits (393), Expect = 6.540e-40
Identity = 71/120 (59.17%), Postives = 98/120 (81.67%), Query Frame = 0
Query:  336 RKIKILMLGDTGVGKSSLINRFTEDTFNPSLVGTVGVDFKMKPVQIDGEDVLLQVWDTAGQERFHKITRAYYRGSHGIVIVYDLSNPATLENIEYWMRNIQDNAGQTVKTCLVGNKMDLR 455
            R++KIL+LGD+GVGKSSLI R+T DTF+PSL  TVGV+FK K +   GE + +QVWDTAGQE+FHKIT +YY+G+ GI++VYD+++  +L N+EYW++NI+ +A  +V   LVGNK+DLR
Sbjct:   51 RRVKILLLGDSGVGKSSLIVRWTHDTFSPSLASTVGVNFKNKKIAYKGECLQVQVWDTAGQEQFHKITTSYYKGAQGIMLVYDVADANSLANVEYWIKNIKTHASDSVHVVLVGNKIDLR 170          
BLAST of mRNA_P-wetherbeei_contig6341.1.1 vs. uniprot
Match: A0A8B8CHH6_CRAVI (ras-related protein Rab-10-like n=3 Tax=Crassostrea TaxID=6564 RepID=A0A8B8CHH6_CRAVI)

HSP 1 Score: 152 bits (384), Expect = 8.800e-40
Identity = 62/125 (49.60%), Postives = 99/125 (79.20%), Query Frame = 0
Query:  339 KILMLGDTGVGKSSLINRFTEDTFNPSLVGTVGVDFKMKPVQIDGEDVLLQVWDTAGQERFHKITRAYYRGSHGIVIVYDLSNPATLENIEYWMRNIQDNAGQTVKTCLVGNKMDLRDELEAAEE 463
            K+L++GD+GVGK+ L+ RF++D FN + + T+G+DFK+K V++ G+ + LQ+WDTAGQERFH IT +YYRG+ GI++VYD++NP T ENI  W+RNI ++A + V+  ++GNK D+ ++ + ++E
Sbjct:   11 KLLLIGDSGVGKTCLLFRFSDDAFNTTFISTIGIDFKIKTVELGGKKIKLQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNPKTFENISKWLRNIDEHANEDVEKMILGNKCDMENKRQVSKE 135          
BLAST of mRNA_P-wetherbeei_contig6341.1.1 vs. uniprot
Match: A0A7S3STZ6_9SPIT (Hypothetical protein (Fragment) n=1 Tax=Strombidinopsis acuminata TaxID=141414 RepID=A0A7S3STZ6_9SPIT)

HSP 1 Score: 152 bits (384), Expect = 9.900e-40
Identity = 67/121 (55.37%), Postives = 96/121 (79.34%), Query Frame = 0
Query:  337 KIKILMLGDTGVGKSSLINRFTEDTFNPSLVGTVGVDFKMKPVQIDGEDVLLQVWDTAGQERFHKITRAYYRGSHGIVIVYDLSNPATLENIEYWMRNIQDNAGQTVKTCLVGNKMDLRDE 457
            +IK++M+GD  VGK++++ R+TED F  S++ T+G+DFK+K VQI+G+ V LQ+WDTAGQERF  IT+AYYRG+ GI+++YD++N  TL+N+  W+RNI+ NA QTV   LVGNK D+  E
Sbjct:   10 QIKLMMIGDQAVGKTAMLVRYTEDDFKESVLPTIGIDFKVKTVQIEGKRVKLQIWDTAGQERFRTITQAYYRGAMGILLIYDVTNSKTLQNVRNWVRNIEGNAPQTVNKILVGNKCDMESE 130          
BLAST of mRNA_P-wetherbeei_contig6341.1.1 vs. uniprot
Match: A0A0R3STN6_HYMDI (Uncharacterized protein n=1 Tax=Hymenolepis diminuta TaxID=6216 RepID=A0A0R3STN6_HYMDI)

HSP 1 Score: 150 bits (378), Expect = 1.050e-39
Identity = 62/125 (49.60%), Postives = 97/125 (77.60%), Query Frame = 0
Query:  339 KILMLGDTGVGKSSLINRFTEDTFNPSLVGTVGVDFKMKPVQIDGEDVLLQVWDTAGQERFHKITRAYYRGSHGIVIVYDLSNPATLENIEYWMRNIQDNAGQTVKTCLVGNKMDLRDELEAAEE 463
            K+L++GD+GVGK+SL+ +FTE+ FN + + T+G+DFK++ +++DG+ + LQ+WDTAGQERF  IT AYYRG+ GI++VYD++ P T  NI++W+RNI D+A   V+  L+GNK D+  + +  +E
Sbjct:   10 KLLLIGDSGVGKTSLLFQFTEEQFNATFIATIGIDFKIRTIEVDGKKIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITQPKTYHNIKHWLRNIVDHANSDVEQMLLGNKCDMESQRQIKKE 134          
BLAST of mRNA_P-wetherbeei_contig6341.1.1 vs. uniprot
Match: A0A6G1SA60_9ACAR (Ras-related protein Rab-8A n=2 Tax=Eukaryota TaxID=2759 RepID=A0A6G1SA60_9ACAR)

HSP 1 Score: 152 bits (384), Expect = 1.110e-39
Identity = 64/125 (51.20%), Postives = 101/125 (80.80%), Query Frame = 0
Query:  339 KILMLGDTGVGKSSLINRFTEDTFNPSLVGTVGVDFKMKPVQIDGEDVLLQVWDTAGQERFHKITRAYYRGSHGIVIVYDLSNPATLENIEYWMRNIQDNAGQTVKTCLVGNKMDLRDELEAAEE 463
            K+L++GD+GVGK+S++ +F+EDTF+P+ + T+G+DFK++ +++DG+ + LQVWDTAGQERF  IT AYYRG+ GI++VYD+SN  + ENI  W+RNI+ +A Q V+  ++GNK D+ D+ + ++E
Sbjct:   11 KLLLIGDSGVGKTSILFKFSEDTFSPAFISTIGIDFKIRTIEVDGKKIKLQVWDTAGQERFRTITTAYYRGAMGIMLVYDVSNLKSFENISNWIRNIEMHATQDVELMILGNKCDIADKRQVSKE 135          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6341.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YLY5_9STRA4.460e-5776.80P-loop containing nucleoside triphosphate hydrolas... [more]
H6WB87_VAULI1.870e-4965.15Rab8 family GTPase n=1 Tax=Vaucheria litorea TaxID... [more]
D8LMQ2_ECTSI5.320e-4560.67Rab8E, RAB family GTPase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KJK4_9PHAE4.650e-4459.73Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
E4X453_OIKDI3.510e-4050.40Uncharacterized protein n=2 Tax=Oikopleura dioica ... [more]
A0A482RSH1_9ARCH6.540e-4059.17GTP-binding protein n=1 Tax=archaeon TaxID=1906665... [more]
A0A8B8CHH6_CRAVI8.800e-4049.60ras-related protein Rab-10-like n=3 Tax=Crassostre... [more]
A0A7S3STZ6_9SPIT9.900e-4055.37Hypothetical protein (Fragment) n=1 Tax=Strombidin... [more]
A0A0R3STN6_HYMDI1.050e-3949.60Uncharacterized protein n=1 Tax=Hymenolepis diminu... [more]
A0A6G1SA60_9ACAR1.110e-3951.20Ras-related protein Rab-8A n=2 Tax=Eukaryota TaxID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 444..464
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 379..401
score: 50.31
coord: 338..359
score: 46.02
coord: 441..454
score: 47.07
coord: 361..377
score: 29.94
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 335..513
e-value: 3.2E-9
score: 16.8
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 338..513
e-value: 8.7E-45
score: 164.8
NoneNo IPR availablePIRSRPIRSR006809-2PIRSR006809-2coord: 328..461
e-value: 5.2E-5
score: 20.1
NoneNo IPR availablePIRSRPIRSR006809-1PIRSR006809-1coord: 328..461
e-value: 5.2E-5
score: 20.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 156..177
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 178..200
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..244
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..295
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 463..513
NoneNo IPR availablePANTHERPTHR47977LD21953P-RELATEDcoord: 280..464
NoneNo IPR availablePANTHERPTHR47977:SF51RAS AND EF-HAND DOMAIN-CONTAINING PROTEINcoord: 280..464
NoneNo IPR availablePROSITEPS51419RABcoord: 333..513
score: 24.114574
NoneNo IPR availableCDDcd00154Rabcoord: 338..457
e-value: 3.15887E-61
score: 196.138
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 340..480
e-value: 1.0E-7
score: -19.4
IPR001806Small GTPasePFAMPF00071Rascoord: 339..459
e-value: 8.3E-43
score: 145.8
IPR001806Small GTPasePROSITEPS51421RAScoord: 333..513
score: 10.746859
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 325..466
e-value: 4.1E-50
score: 171.7
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 334..460
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 336..459
e-value: 4.1E-28
score: 96.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6341contigP-wetherbeei_contig6341:214..2109 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6341.1.1mRNA_P-wetherbeei_contig6341.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6341 2..2287 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6341.1.1 ID=prot_P-wetherbeei_contig6341.1.1|Name=mRNA_P-wetherbeei_contig6341.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=514bp
MQEPSLGWGDTIKPSSGAEAGGASSPDLGWDGMMPHDLGGPPSAEDEDSP
EVDVDLGWGASEDLQAQPLGYANRSGRARSHSFYEDDDDVGADLDAAITG
VPRARGPDGGGREGGGGAGGGGSSSRGRSDSMDGEGSAPRGPRVGALNPN
EMAALRDGLHSHHAAVVRRGRADSSDVEDDGESGDDGGSAASDDFDDGSA
TDDGGASASGGRSAGGGGRGGHLGADDDLVSDEEQVSRSLPPVPGSASLR
MLGYASNPGSVGRPGLGEYRDGFPGAALDDAALQRRSGGGSGMPPTPPGM
VPARLNIPRAGGGVGGVGGSYVGYGHVRRTSPSNARKIKILMLGDTGVGK
SSLINRFTEDTFNPSLVGTVGVDFKMKPVQIDGEDVLLQVWDTAGQERFH
KITRAYYRGSHGIVIVYDLSNPATLENIEYWMRNIQDNAGQTVKTCLVGN
KMDLRDELEAAEEAVGGGGGGGGTGTCHGGGGGGRRGSRGGSGSGDFGYD
MVGTDDGRRIADK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom