mRNA_P-wetherbeei_contig6330.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig6330.1.1
Unique NamemRNA_P-wetherbeei_contig6330.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig6330.1.1 vs. uniprot
Match: A0A7S2UYI4_9STRA (Hypothetical protein n=2 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYI4_9STRA)

HSP 1 Score: 67.0 bits (162), Expect = 1.050e-11
Identity = 28/52 (53.85%), Postives = 35/52 (67.31%), Query Frame = 1 
Query:    1 RGLVLFIHGLGGHCNSPPKVAFGRDLAATGIATVMPDLPGHGYSEGERCYVE 156
            RG+VL+IHG GGH N P     G  ++  G+A +  DL GHGYSEGER Y+E
Sbjct:   40 RGVVLWIHGYGGHINDPKGTTLGESMSKKGLAIITMDLHGHGYSEGERAYLE 91
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BLAST of mRNA_P-wetherbeei_contig6330.1.1 vs. uniprot
Match: A0A836C8U6_9STRA (Alpha/Beta hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8U6_9STRA)

HSP 1 Score: 61.6 bits (148), Expect = 8.670e-10
Identity = 27/51 (52.94%), Postives = 35/51 (68.63%), Query Frame = 1 
Query:    1 RGLVLFIHGLGGHCNSPPKVAFGRDLAATGIATVMPDLPGHGYSEGERCYV 153
            + +V F HG GGH +   K+ +G+ L+  G+A VMPDL GHGYSEG R YV
Sbjct:    9 KAVVFFFHGYGGHNSYISKLWYGKYLSERGMAVVMPDLVGHGYSEGTRAYV 59
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BLAST of mRNA_P-wetherbeei_contig6330.1.1 vs. uniprot
Match: D8LTQ2_ECTSI (Putative phospholipase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTQ2_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 9.310e-10
Identity = 26/52 (50.00%), Postives = 31/52 (59.62%), Query Frame = 1 
Query:    1 RGLVLFIHGLGGHCNSPPKVAFGRDLAATGIATVMPDLPGHGYSEGERCYVE 156
            + +VLF HG G HCNSP K   G  +   G+     DL GHGYS GER Y+E
Sbjct:  104 KAVVLFSHGYGAHCNSPRKHQMGMSMPEKGLCMYQMDLEGHGYSGGERAYIE 155
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BLAST of mRNA_P-wetherbeei_contig6330.1.1 vs. uniprot
Match: A0A813HDC7_POLGL (Hypothetical protein n=2 Tax=Polarella glacialis TaxID=89957 RepID=A0A813HDC7_POLGL)

HSP 1 Score: 57.8 bits (138), Expect = 2.090e-8
Identity = 26/52 (50.00%), Postives = 31/52 (59.62%), Query Frame = 1 
Query:    1 RGLVLFIHGLGGHCNSPPKVAFGRDLAATGIATVMPDLPGHGYSEGERCYVE 156
            +G + F+HG G H N P    + + LAA G A    D PGHGYS GER YVE
Sbjct:   91 QGSIFFVHGYGAHINRPMLNQWLQRLAAAGYAIFSVDFPGHGYSPGERAYVE 142
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6330.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7S2UYI4_9STRA1.050e-1153.85Hypothetical protein n=2 Tax=Fibrocapsa japonica T... [more]
A0A836C8U6_9STRA8.670e-1052.94Alpha/Beta hydrolase protein n=1 Tax=Tribonema min... [more]
D8LTQ2_ECTSI9.310e-1050.00Putative phospholipase n=2 Tax=Ectocarpus TaxID=28... [more]
A0A813HDC7_POLGL2.090e-850.00Hypothetical protein n=2 Tax=Polarella glacialis T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6330contigP-wetherbeei_contig6330:2909..3064 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D8LTQ2
PFAMsHydrolase_4
Model size156
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue1.53e-10
EggNOG OGsCOG2267@1|root,KOG1455@2759|Eukaryota
Descriptionacylglycerol lipase activity
Cds size156
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186905.4513843-CDS-P-wetherbeei_contig6330:2908..30641683186905.4513843-CDS-P-wetherbeei_contig6330:2908..3064Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig6330 2909..3064 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6330.1.1prot_P-wetherbeei_contig6330.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig6330 2909..3064 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig6330.1.1

>prot_P-wetherbeei_contig6330.1.1 ID=prot_P-wetherbeei_contig6330.1.1|Name=mRNA_P-wetherbeei_contig6330.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=52bp
RGLVLFIHGLGGHCNSPPKVAFGRDLAATGIATVMPDLPGHGYSEGERCY
VE
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mRNA from alignment at P-wetherbeei_contig6330:2909..3064+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig6330.1.1 ID=mRNA_P-wetherbeei_contig6330.1.1|Name=mRNA_P-wetherbeei_contig6330.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=156bp|location=Sequence derived from alignment at P-wetherbeei_contig6330:2909..3064+ (Phaeothamnion wetherbeei SAG_119_79)
CGTGGACTCGTGTTGTTCATCCACGGCCTGGGCGGCCACTGCAACTCGCC
CCCAAAAGTGGCGTTCGGACGCGATCTTGCCGCGACGGGCATCGCCACGG
TCATGCCCGACCTGCCCGGGCACGGCTATTCCGAGGGAGAGAGATGCTAC
GTGGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig6330:2909..3064+

>mRNA_P-wetherbeei_contig6330.1.1 ID=mRNA_P-wetherbeei_contig6330.1.1|Name=mRNA_P-wetherbeei_contig6330.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=156bp|location=Sequence derived from alignment at P-wetherbeei_contig6330:2909..3064+ (Phaeothamnion wetherbeei SAG_119_79)
CGTGGACTCGTGTTGTTCATCCACGGCCTGGGCGGCCACTGCAACTCGCC
CCCAAAAGTGGCGTTCGGACGCGATCTTGCCGCGACGGGCATCGCCACGG
TCATGCCCGACCTGCCCGGGCACGGCTATTCCGAGGGAGAGAGATGCTAC
GTGGAG
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