prot_P-wetherbeei_contig6329.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig6329.1.1
Unique Nameprot_P-wetherbeei_contig6329.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length194
Homology
BLAST of mRNA_P-wetherbeei_contig6329.1.1 vs. uniprot
Match: A0A1F4A5S4_9PROT (Lipopolysaccharide export system protein LptA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F4A5S4_9PROT)

HSP 1 Score: 246 bits (629), Expect = 2.100e-80
Identity = 123/192 (64.06%), Postives = 156/192 (81.25%), Query Frame = 0
Query:    1 MLLACCLLAPTAGMAERADRDKPVNLEADQVTVDDNKQTATFTGRVVLTQGTLVIRGDRMVVQQDADGFKYGVAYGNLASFRQKREGYDEYIDGYAERIEYDSKAEKLQMFNRAYLKKANDDVRGNYISYEVATEFFKVTGGGKQAATAANPEGRVRAIIQPKSKA-PPAGAPLPLKPATDVANPRENPAGA 191
            + +AC L+   A   E+ADRDKP+NLEAD+VTVDD KQ ATF G VVLTQGT+VIRGDRM V+QD DGF++G+++G LA FRQKREG+DEYI+G+AERIEYD +A+K+QMF RA +K+  D+VRG+YISY+  TEFF+V GGG +AA+  NP+GRVRA++QPKS+  PPA  P+ LKPATD+A PRE P  A
Sbjct:    8 LAIACALVLAGAAHGEKADRDKPINLEADRVTVDDAKQLATFEGNVVLTQGTMVIRGDRMEVRQDYDGFRHGISWGKLAYFRQKREGFDEYIEGWAERIEYDGRADKVQMFTRAAMKRGQDEVRGDYISYDATTEFFQVIGGGAKAASPNNPDGRVRAVMQPKSREKPPASPPVTLKPATDLAAPREEPGAA 199          
BLAST of mRNA_P-wetherbeei_contig6329.1.1 vs. uniprot
Match: A0A1F4DTU7_9PROT (Lipopolysaccharide export system protein LptA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DTU7_9PROT)

HSP 1 Score: 245 bits (626), Expect = 9.880e-80
Identity = 129/195 (66.15%), Postives = 158/195 (81.03%), Query Frame = 0
Query:    1 MLLACC-LLAPTAGMAERADRDKPVNLEADQVTVDDNKQTATFTGRVVLTQGTLVIRGDRMVVQQDADGFKYGVAYGNLASFRQKREGYDEYIDGYAERIEYDSKAEKLQMFNRAYLKKANDDVRGNYISYEVATEFFKVTGGGKQAATAANPEGRVRAIIQPKSKA-PPAGAPLPLKPATDVANPRENPAGAPR 193
            +L  CC LL  TA  AE+ADRDKP+NLEAD+VTVDD KQ + F G VVLTQGT+VIRG RM V+QD DGFK G A+G+LA FRQKREG+DEYI+G+AERIEYD +A+K+QMF RAY+K+  D+VRGNYISY+ ATEFF+V GGG +AAT  NP+GRVRA++QPKSK  PPA AP+ L+PA  ++ PRE   GAP+
Sbjct:   22 ILATCCALLLATASHAEKADRDKPINLEADRVTVDDAKQVSIFDGNVVLTQGTMVIRGYRMEVRQDNDGFKRGTAWGDLAYFRQKREGFDEYIEGWAERIEYDGRADKMQMFVRAYMKRGEDEVRGNYISYDAATEFFQVIGGGAKAATPNNPDGRVRAVLQPKSKQKPPAAAPVSLQPADKISAPREE-IGAPK 215          
BLAST of mRNA_P-wetherbeei_contig6329.1.1 vs. uniprot
Match: A0A7C3JPE8_9PROT (Lipopolysaccharide export system protein LptA n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C3JPE8_9PROT)

HSP 1 Score: 244 bits (622), Expect = 2.520e-79
Identity = 126/189 (66.67%), Postives = 151/189 (79.89%), Query Frame = 0
Query:    4 ACC---LLAPTAGMAERADRDKPVNLEADQVTVDDNKQTATFTGRVVLTQGTLVIRGDRMVVQQDADGFKYGVAYGNLASFRQKREGYDEYIDGYAERIEYDSKAEKLQMFNRAYLKKANDDVRGNYISYEVATEFFKVTGGGKQAATAANPEGRVRAIIQPKSKA-PPAGAPLPLKPATDVANPRENP 188
            ACC   LLA     AE+ADRDKP+NLEAD+VT+DD KQTA F G VVLTQGTL IRGDRM V+QD +GF+YG  +G+LA FRQKREGYDEYI+G+AERIEYD +AE +QMF RA +++A D+VRGNYISY+  TEF++V GGG +AATA NPEGRVRA+IQPK K  PPA  P+ LKPA  ++ PRE P
Sbjct:    9 ACCALALLAAPLARAEKADRDKPINLEADRVTIDDAKQTAMFEGNVVLTQGTLQIRGDRMEVRQDKEGFRYGTTWGDLAHFRQKREGYDEYIEGWAERIEYDGRAETMQMFARARMRRAQDEVRGNYISYDARTEFYQVVGGGPRAATANNPEGRVRAVIQPKPKEQPPAAPPVALKPAPAISAPREEP 197          
BLAST of mRNA_P-wetherbeei_contig6329.1.1 vs. uniprot
Match: A0A1F4DKJ3_9PROT (Lipopolysaccharide export system protein LptA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_13 TaxID=1797495 RepID=A0A1F4DKJ3_9PROT)

HSP 1 Score: 243 bits (619), Expect = 1.140e-78
Identity = 123/189 (65.08%), Postives = 150/189 (79.37%), Query Frame = 0
Query:    5 CCLLAPTAGMAERADRDKPVNLEADQVTVDDNKQTATFTGRVVLTQGTLVIRGDRMVVQQDADGFKYGVAYGNLASFRQKREGYDEYIDGYAERIEYDSKAEKLQMFNRAYLKKANDDVRGNYISYEVATEFFKVTGGGKQAATAANPEGRVRAIIQPKSKAPPAGAPLPLKPATDVANPRENPAGAPR 193
            C L+  TA  AE+ADR+KP+NLEAD+VTVDD +Q A F G VVLTQGTL+IRGDRM V+QD DGFK+G  +GNLA FRQKREGYD+YI+G+AERIEYD +A+K+QMFNRA +K+  D+VRGNYISY+  TEFF+V GGG +AAT  NPEGRVRA++QPK K     AP+ L PA  +  PRE  AGAP+
Sbjct:   28 CTLIFATAAYAEKADREKPINLEADRVTVDDARQIAVFEGHVVLTQGTLMIRGDRMQVRQDNDGFKHGTTWGNLAYFRQKREGYDDYIEGWAERIEYDGRADKMQMFNRALMKRGQDEVRGNYISYDATTEFFQVIGGGPKAATPNNPEGRVRAVLQPKPKEKTPAAPVSLTPAEKLGAPREE-AGAPK 215          
BLAST of mRNA_P-wetherbeei_contig6329.1.1 vs. uniprot
Match: A0A3N5WHT5_9PROT (Lipopolysaccharide export system protein LptA n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A3N5WHT5_9PROT)

HSP 1 Score: 234 bits (596), Expect = 5.290e-75
Identity = 120/181 (66.30%), Postives = 147/181 (81.22%), Query Frame = 0
Query:    6 CLLAPTAGMAERADRDKPVNLEADQVTVDDNKQTATFTGRVVLTQGTLVIRGDRMVVQQDADGFKYGVAYGNLASFRQKREGYDEYIDGYAERIEYDSKAEKLQMFNRAYLKKANDDVRGNYISYEVATEFFKVTGGGKQAATAANPEGRVRAIIQPKSKAPPAG-APLPLKPATDVANPR 185
            C   PT+  AE+ADR+KP+NLEAD+VTVDD KQ +TF GRVVLTQGTL+IRGDRM V+QD+ GFKYG  +GNLA FRQKR+GYDE+I+G+AERIEYD +A+K+QMFNRA +KKA D+VRGNYISY+  TEFF+V GGG +AA+A NP+GRVR ++QPKSK  PA  A  P+KP      PR
Sbjct:   42 CAAGPTS--AEKADREKPINLEADRVTVDDAKQVSTFEGRVVLTQGTLIIRGDRMEVRQDSQGFKYGTTWGNLAYFRQKRDGYDEFIEGWAERIEYDGRADKVQMFNRASMKKAGDEVRGNYISYDANTEFFQVIGGGAKAASAENPDGRVRVVLQPKSKDKPAPQATDPVKPEAAPKQPR 220          
BLAST of mRNA_P-wetherbeei_contig6329.1.1 vs. uniprot
Match: A0A1F4BN70_9PROT (Lipopolysaccharide export system protein LptA n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_67_26 TaxID=1797492 RepID=A0A1F4BN70_9PROT)

HSP 1 Score: 228 bits (581), Expect = 5.060e-73
Identity = 119/187 (63.64%), Postives = 145/187 (77.54%), Query Frame = 0
Query:    3 LACCLLAPTAG--MAERADRDKPVNLEADQVTVDDNKQTATFTGRVVLTQGTLVIRGDRMVVQQDADGFKYGVAYGNLASFRQKREGYDEYIDGYAERIEYDSKAEKLQMFNRAYLKKANDDVRGNYISYEVATEFFKVTGGGKQAATAANPEGRVRAIIQPKSKAPPAGAP-LPLKPATDVANPRE 186
            LACC L   AG   AERADR+KPVNLEAD+VT+DD +QTA F G V+LTQGT+ +RGDRM V+QD +GF+ G  +G  A FRQKREGYDEY++G+AERIEYD +AE ++MF+RA LK+  D+VRGN ISY+  TEFF+VTGGG +AA   NPEGRVRA+IQPK K  P  AP + LKPA  +A PRE
Sbjct:   14 LACCALLAVAGPLRAERADREKPVNLEADRVTIDDARQTALFEGNVLLTQGTMQLRGDRMEVRQDKEGFRLGTTWGKPAYFRQKREGYDEYVEGWAERIEYDGRAETMRMFDRAQLKRGPDEVRGNTISYDARTEFFQVTGGGAKAAAPNNPEGRVRAVIQPKPKDKPGAAPPVSLKPAESIAAPRE 200          
BLAST of mRNA_P-wetherbeei_contig6329.1.1 vs. uniprot
Match: A0A7C2UIE1_9PROT (Lipopolysaccharide export system protein LptA n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2UIE1_9PROT)

HSP 1 Score: 222 bits (565), Expect = 1.710e-70
Identity = 116/193 (60.10%), Postives = 149/193 (77.20%), Query Frame = 0
Query:    2 LLACCLLAPTAGMAERADRDKPVNLEADQVTVDDNKQTATFTGRVVLTQGTLVIRGDRMVVQQDADGFKYGVAYGNLASFRQKREGYDEYIDGYAERIEYDSKAEKLQMFNRAYLKKANDDVRGNYISYEVATEFFKVTGGGKQAATAANPEGRVRAIIQPKSKA-PPAGAPLPLKPATDVANPRENPAGAPR 193
            L A      +A  AE+ADR+KP++LEAD+VTVD+ KQ A F G VVLTQGTL+IRGDRM V+QD  GF++G+ +GNLA FRQKREG+DEYI+G+AERIEYD +A+K+QMFNRA +K+  D+V G+YISY+  +EFF+V GG  ++A+A  P+GRVRAI+QPK K  PPA AP+PLKPA  +   RE    APR
Sbjct:   24 LAAAIAFFSSAAHAEKADREKPIHLEADRVTVDEAKQVAVFEGNVVLTQGTLMIRGDRMQVRQDDAGFRHGITWGNLAYFRQKREGFDEYIEGWAERIEYDGRADKVQMFNRASMKRGQDEVHGSYISYDAVSEFFQVVGG--KSASAGAPQGRVRAILQPKPKEKPPASAPVPLKPADKLGTAREEDRAAPR 214          
BLAST of mRNA_P-wetherbeei_contig6329.1.1 vs. uniprot
Match: A0A0S8BW46_9PROT (Lipopolysaccharide export system protein LptA n=1 Tax=Betaproteobacteria bacterium SG8_41 TaxID=1703391 RepID=A0A0S8BW46_9PROT)

HSP 1 Score: 212 bits (539), Expect = 6.730e-67
Identity = 110/181 (60.77%), Postives = 139/181 (76.80%), Query Frame = 0
Query:    7 LLAPTAGMAERADRDKPVNLEADQVTVDDNKQTATFTGRVVLTQGTLVIRGDRMVVQQDADGFKYGVAYGNLASFRQKREGYDEYIDGYAERIEYDSKAEKLQMFNRAYLKKANDDVRGNYISYEVATEFFKVTGGGKQAATAANPEGRVRAIIQPKSKAPPAGAP-LPLKPATDVANPRE 186
            L A +  MAER DRDKP+NLEAD+VT++D KQ A F G VVL QGTL +RGDRM V+QD  GFK+G A+GNLA FRQKR+G DEYI+G+AER+EYD +AE ++MFNRA +K+  D+VRGN+ISY+  +EF++V GGG +AA A    GRVRA+IQPK K  PA +P L LKP+  +  PRE
Sbjct:    2 LHASSVAMAERGDRDKPINLEADKVTINDAKQVAVFEGNVVLRQGTLELRGDRMEVRQDKAGFKHGTAWGNLAYFRQKRDGVDEYIEGWAERLEYDGRAETMKMFNRARVKRGQDEVRGNFISYDGKSEFYQVVGGGAKAADAKGSGGRVRAVIQPKPKTKPAASPPLGLKPSEALTPPRE 182          
BLAST of mRNA_P-wetherbeei_contig6329.1.1 vs. uniprot
Match: A0A6F8VFJ9_9PROT (Lipopolysaccharide export system protein LptA n=1 Tax=Sulfurimicrobium lacus TaxID=2715678 RepID=A0A6F8VFJ9_9PROT)

HSP 1 Score: 210 bits (535), Expect = 3.650e-66
Identity = 106/182 (58.24%), Postives = 137/182 (75.27%), Query Frame = 0
Query:    7 LLAPTAGMAERADRDKPVNLEADQVTVDDNKQTATFTGRVVLTQGTLVIRGDRMVVQQDADGFKYGVAYGNLASFRQKREGYDEYIDGYAERIEYDSKAEKLQMFNRAYLKKANDDVRGNYISYEVATEFFKVTGGGKQAATAANPEGRVRAIIQPK---SKAPPAGAPLPLKPATDVANPR 185
            LLAP   +AE ADRDKP+NLEAD VTVDD  + +T+ G V LTQGTL+IR D++VV +DA G ++G AYGN ASFRQKREG DEY++GY +RIEYD K +K+++F +A +K+  D+VRGNYISY+  TEFF+  GGGK+ A+    +GRV A+IQPK    K+P A AP+PLK A  +A PR
Sbjct:   15 LLAPATVLAELADRDKPINLEADTVTVDDATKVSTYMGNVQLTQGTLLIRADKLVVTEDATGLQHGTAYGNPASFRQKREGLDEYVEGYGQRIEYDGKNDKVELFTQARMKRGQDEVRGNYISYDAKTEFFQALGGGKEVASPGREKGRVHAVIQPKPKPGKSPAAPAPVPLKGAESIAQPR 196          
BLAST of mRNA_P-wetherbeei_contig6329.1.1 vs. uniprot
Match: S6AEZ8_SULDS (Lipopolysaccharide export system protein LptA n=1 Tax=Sulfuricella denitrificans (strain DSM 22764 / NBRC 105220 / skB26) TaxID=1163617 RepID=S6AEZ8_SULDS)

HSP 1 Score: 207 bits (526), Expect = 9.050e-65
Identity = 108/180 (60.00%), Postives = 138/180 (76.67%), Query Frame = 0
Query:    7 LLAPTAGMAERADRDKPVNLEADQVTVDDNKQTATFTGRVVLTQGTLVIRGDRMVVQQDADGFKYGVAYGNLASFRQKREGYDEYIDGYAERIEYDSKAEKLQMFNRAYLKKANDDVRGNYISYEVATEFFKVTGGGKQAATAANPEGRVRAIIQPKSK-APPAGAPLPLKPATDVANPR 185
            L+A     AE+ADRDKP+NLEAD  TVDD K+ + + G V+LTQGTL IR +++VV++DA+GF+ G AYGNLASFRQKREGYDEYI+GYA RIEYD + + +Q+F++A +K+  D+ +GNYISY+  TEFF+V GG K+ ATA NP GRVR +IQPK K A P   P  LKPA  +ANPR
Sbjct:   20 LVAAPWAHAEKADRDKPINLEADTATVDDAKKISIYEGNVILTQGTLQIRANKLVVKEDAEGFQLGTAYGNLASFRQKREGYDEYIEGYALRIEYDQRKDLVQLFSQARMKRGLDEAQGNYISYDGKTEFFQVIGG-KETATANNPRGRVRTVIQPKQKIATPDAKPTVLKPAESIANPR 198          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig6329.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F4A5S4_9PROT2.100e-8064.06Lipopolysaccharide export system protein LptA n=1 ... [more]
A0A1F4DTU7_9PROT9.880e-8066.15Lipopolysaccharide export system protein LptA n=1 ... [more]
A0A7C3JPE8_9PROT2.520e-7966.67Lipopolysaccharide export system protein LptA n=1 ... [more]
A0A1F4DKJ3_9PROT1.140e-7865.08Lipopolysaccharide export system protein LptA n=1 ... [more]
A0A3N5WHT5_9PROT5.290e-7566.30Lipopolysaccharide export system protein LptA n=1 ... [more]
A0A1F4BN70_9PROT5.060e-7363.64Lipopolysaccharide export system protein LptA n=1 ... [more]
A0A7C2UIE1_9PROT1.710e-7060.10Lipopolysaccharide export system protein LptA n=1 ... [more]
A0A0S8BW46_9PROT6.730e-6760.77Lipopolysaccharide export system protein LptA n=1 ... [more]
A0A6F8VFJ9_9PROT3.650e-6658.24Lipopolysaccharide export system protein LptA n=1 ... [more]
S6AEZ8_SULDS9.050e-6560.00Lipopolysaccharide export system protein LptA n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.60.450.10Lipopolysaccharide (LPS) transport protein A like domaincoord: 17..166
e-value: 2.0E-39
score: 136.6
NoneNo IPR availablePIRSRPIRSR036893-51PIRSR036893-51coord: 30..91
e-value: 0.086
score: 10.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 153..193
NoneNo IPR availablePANTHERPTHR36504LIPOPOLYSACCHARIDE EXPORT SYSTEM PROTEIN LPTAcoord: 2..167
IPR014340Lipopolysaccharide export system protein LptATIGRFAMTIGR03002TIGR03002coord: 15..163
e-value: 1.0E-46
score: 156.3
IPR014340Lipopolysaccharide export system protein LptAHAMAPMF_01914LPS_assembly_LptAcoord: 1..163
score: 26.532032
IPR005653Organic solvent tolerance-like, N-terminalPFAMPF03968LptD_Ncoord: 26..135
e-value: 1.9E-29
score: 102.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig6329contigP-wetherbeei_contig6329:635..1216 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig6329.1.1mRNA_P-wetherbeei_contig6329.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig6329 635..1219 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig6329.1.1 ID=prot_P-wetherbeei_contig6329.1.1|Name=mRNA_P-wetherbeei_contig6329.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=194bp
MLLACCLLAPTAGMAERADRDKPVNLEADQVTVDDNKQTATFTGRVVLTQ
GTLVIRGDRMVVQQDADGFKYGVAYGNLASFRQKREGYDEYIDGYAERIE
YDSKAEKLQMFNRAYLKKANDDVRGNYISYEVATEFFKVTGGGKQAATAA
NPEGRVRAIIQPKSKAPPAGAPLPLKPATDVANPRENPAGAPR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014340LptA
IPR005653OstA-like_N